Miyakogusa Predicted Gene

Lj1g3v3834390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3834390.1 Non Characterized Hit- tr|B9RBJ8|B9RBJ8_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,72.31,0,PUTATIVE UNCHARACTERIZED PROTEIN ORF-LAM33_012  PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; RNA M5U METHY,CUFF.31644.1
         (521 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g029350.1 | methyltransferase small domain protein | HC | ...   825   0.0  

>Medtr7g029350.1 | methyltransferase small domain protein | HC |
           chr7:10409242-10401021 | 20130731
          Length = 513

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/525 (78%), Positives = 439/525 (83%), Gaps = 16/525 (3%)

Query: 1   MTFRLISAPPSFPLFTCHXXXXXXXXXXXXRPLPPPPQISXXXXXXXXXXXXXXXCALHC 60
           MT RLIS PPSF  FTCH                   QIS               CALHC
Sbjct: 1   MTLRLISPPPSFHRFTCHATTHPPPPPP---------QISTATPISSTPHPPPLTCALHC 51

Query: 61  SHFQSCSGCTHEFNLHRPVVLEEATEFFNRYGVEDFTFDTCKLWGWRCRAKLAVRGSSTN 120
           SHFQSCSGCTHE NLHRPV++E+A  FF  YGV DFTFDTCKLWGWRCRAKLAVRGSSTN
Sbjct: 52  SHFQSCSGCTHELNLHRPVIVEDAANFFRNYGVTDFTFDTCKLWGWRCRAKLAVRGSSTN 111

Query: 121 PLIGLYEEGTHNVIDIPECKAHHPNINATVELLRRGITELDIEPYLEDEGTGDLRYVQMA 180
           PLIGLYEEGTHNVIDIPECKAHHPNINA VELLRRGITELDIEPYLEDEGTG+LRYVQMA
Sbjct: 112 PLIGLYEEGTHNVIDIPECKAHHPNINAAVELLRRGITELDIEPYLEDEGTGNLRYVQMA 171

Query: 181 VTTYNTSLPAPERYKNGKVQVTLVWNSRSEQSPGVDKMNALANFLWKNGGPRSRLHLIHS 240
           VTT+NTSLPA +RY +GKVQVTLVWNSR+E+S G DK+NALANFLWKNGGP+SRLHLIHS
Sbjct: 172 VTTHNTSLPAGQRYMSGKVQVTLVWNSRNEKSHGSDKLNALANFLWKNGGPQSRLHLIHS 231

Query: 241 VWANFQTSSNNIIFGNRWRHLIGERDFWEHVGGIDVSLAPSSFGQANTRAFDALLRKLQK 300
           VWANFQT+  NIIFGNRWRHL+GERDFWEHVGGIDVSLAPSSFGQANTRAFD+LL+KLQK
Sbjct: 232 VWANFQTTDKNIIFGNRWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFDSLLQKLQK 291

Query: 301 YVPHESSVADLYAGAGVIGLSLAATRKCRSIKCIEINKESKASFEKTIARLPSTVNSSIS 360
           YVP+ESSVADLYAGAGVIGLSLAATRKCRSIKCIEINKESK SFEKTI RLP+TV+SSI+
Sbjct: 292 YVPYESSVADLYAGAGVIGLSLAATRKCRSIKCIEINKESKVSFEKTIQRLPATVDSSIT 351

Query: 361 WHHADASKEPLLWLVGSDVVVIDPPRKGLDVSLIDALKDISSIERKVLSSPERSNSVQEE 420
           WHHADASK+P  WLVGSDVVVIDPPRKGLD SLIDALK+IS + RK LSS ERSNSVQEE
Sbjct: 352 WHHADASKDPFSWLVGSDVVVIDPPRKGLDSSLIDALKNISLVARKALSSSERSNSVQEE 411

Query: 421 KRPWVLRAKEASVHIGSKPAL----VNDPQSVPKTLIYISCGWESFKEDCKSLLSSKAWH 476
           KRPWVLRA E SV   ++ AL     N    VP+TLIYISCGWESFKEDCKSLLSSKAW+
Sbjct: 412 KRPWVLRANETSV---ARKALSSPEANITPLVPQTLIYISCGWESFKEDCKSLLSSKAWY 468

Query: 477 LEKAHGFNFFPGTQSIEVLAVFKRGPQXXXXXXXXXXHLQGAARH 521
           LEKAHGFNFFPGTQSIEVLAVFKRGPQ          H QGAARH
Sbjct: 469 LEKAHGFNFFPGTQSIEVLAVFKRGPQKKKPGKKKKKHSQGAARH 513