Miyakogusa Predicted Gene

Lj1g3v3834280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3834280.1 Non Characterized Hit- tr|A5AQV3|A5AQV3_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,56.19,7e-18,
,CUFF.31246.1
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g023580.1 | hypothetical protein | HC | chr6:8252108-82556...   125   1e-29
Medtr7g029620.1 | hypothetical protein | HC | chr7:10684687-1067...   114   2e-26

>Medtr6g023580.1 | hypothetical protein | HC | chr6:8252108-8255637
           | 20130731
          Length = 230

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/104 (65%), Positives = 80/104 (76%), Gaps = 9/104 (8%)

Query: 1   MGSCSSVHR---NQETNMKHLGLSF-CSKTDKLVIPPTPIKEKPKNGNFLNSQSPPSRST 56
           MGSCSSV R   N+E N   L ++F  SKT KLVIPP+PIKE+PKNG+   S   PSRST
Sbjct: 1   MGSCSSVQRKTNNKENNNMKLKVAFFGSKTQKLVIPPSPIKEQPKNGDLKFS---PSRST 57

Query: 57  TIIN--GSKEEVFFESKVWLDSDCDDDFYSVNGEFTPSRGSTPV 98
           T  N  GSKEE FF+SK W+DSDC+DDFYSVNG+FTPSRG+TP+
Sbjct: 58  TNFNDFGSKEEAFFDSKAWIDSDCEDDFYSVNGDFTPSRGNTPI 101


>Medtr7g029620.1 | hypothetical protein | HC |
          chr7:10684687-10679375 | 20130731
          Length = 225

 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 75/107 (70%), Gaps = 19/107 (17%)

Query: 1  MGSCSSVHRNQETNMKHLGLSFCSKT-DKLVIPPTPIKE-KPKNGNFL-------NSQSP 51
          MGSCSSVHR+          S CSKT DKLVI P+PIK+ KPKN NF+         +  
Sbjct: 1  MGSCSSVHRD----------SVCSKTVDKLVILPSPIKDNKPKNDNFIIHDHVAVKPRLS 50

Query: 52 PSRSTTIINGSKEEVFFESKVWLDSDCDDDFYSVNGEFTPSRGSTPV 98
          PS ST   NGSKEE FF+SK WLDSDC+DDFYSVNG+FTPSRG+TPV
Sbjct: 51 PSPSTNTFNGSKEEAFFDSKGWLDSDCEDDFYSVNGDFTPSRGTTPV 97