Miyakogusa Predicted Gene

Lj1g3v3834100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3834100.1 tr|Q9SLW5|Q9SLW5_SOYBN Protoporphyrinogen IX
oxidase OS=Glycine max GN=hemG PE=2 SV=1,86.2,0,ADXRDTASE,NULL;
HEMG2/MEE61 (MATERNAL EFFECT EMBRYO ARREST 61), OXIDOREDUCTASE/
PROTOPORPHYRINO,NULL,CUFF.31221.1
         (499 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g031310.1 | protoporphyrinogen oxidase | HC | chr7:1089437...   749   0.0  
Medtr1g085730.1 | protoporphyrinogen IX oxidase | HC | chr1:3832...   155   7e-38
Medtr1g085730.2 | protoporphyrinogen IX oxidase | HC | chr1:3832...   107   3e-23

>Medtr7g031310.1 | protoporphyrinogen oxidase | HC |
           chr7:10894375-10884533 | 20130731
          Length = 499

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/472 (76%), Positives = 397/472 (84%), Gaps = 2/472 (0%)

Query: 28  MASSATAKHDNPRSXXXXXXXXXXXXXXXXXYKLKSHGLDVTVFEADGRAGGKLKSVSQD 87
           MASSA  K DNPRS                 YKLKSHGLDVTVFEA+GRAGG+L++VS+D
Sbjct: 1   MASSA--KDDNPRSVKRVAVVGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGRLRTVSRD 58

Query: 88  GLVWDEGANTMIENGMEVTGLIDALGLQEKQQFPISQHKRYIVKNGTPLLVPTNPVXXXX 147
           GLVWDEGANTM EN +EV GLIDALGL EKQQ+P+SQHKRYIVKNGTP+LVP NP     
Sbjct: 59  GLVWDEGANTMTENEIEVKGLIDALGLHEKQQYPLSQHKRYIVKNGTPVLVPANPAALLK 118

Query: 148 XXXXXXXXXIRIIFEPLMWKRSDSSKVCDEDSQESVGRFFERHFGKEVVEYLIDPFVGGT 207
                    I++IFEP MWKRSDSS V DE+S+ESV RFFERHFGKEVV+YLIDPFVGGT
Sbjct: 119 SKLLSAQSKIQVIFEPFMWKRSDSSAVRDENSEESVSRFFERHFGKEVVDYLIDPFVGGT 178

Query: 208 SAADPESLSVRHSFPELWNLEKRFGSIIAGALQSNLFAKRNKTGETKVAQRKNKPKRGSF 267
           SAA PESLS+RHSFPELWNLEKRFGSIIAGALQS++F K++K GETK   RKNK +RGSF
Sbjct: 179 SAAGPESLSIRHSFPELWNLEKRFGSIIAGALQSSVFGKKDKAGETKDVPRKNKHQRGSF 238

Query: 268 SFQGGMQTLTDTLCKELGKDDLKLNAKVLTLAYSHDGXXXXXXXXXXXXXXXXXPVVDAI 327
           SFQGGMQTLTDTLCKELGKDD+KLNAKVLTLAYSHDG                   VDA+
Sbjct: 239 SFQGGMQTLTDTLCKELGKDDIKLNAKVLTLAYSHDGSSPSQNWSITCTSNRKAQDVDAV 298

Query: 328 IMTAPLCNVKDIKISKRGTPFPLNFLPEVTYLPLSVIISTFKKENVKRPLDGFGVLVPSK 387
           IMTAPL NV+DI+I K+G PFPLNFLPEVTYLPLSV+I+TFKKENVKRPL+GFGVLVPSK
Sbjct: 299 IMTAPLGNVRDIQIKKKGNPFPLNFLPEVTYLPLSVLITTFKKENVKRPLEGFGVLVPSK 358

Query: 388 EQQNGFKTMGTLFSSIMFPDRAPSDLYLYTTFVGGSRNMELAQASTDELKKIVTSDLRKL 447
           EQQNGFKT+GTLFSS+MFPDRAPSD++LYTTF+GG+RN ELAQASTDEL KIVTSDLRKL
Sbjct: 359 EQQNGFKTLGTLFSSMMFPDRAPSDMHLYTTFIGGTRNRELAQASTDELTKIVTSDLRKL 418

Query: 448 LGAEGEPSFVNHFYWSKGFPLYGRNYGSVLEAIDKMEKDLPGFFYAGNHRGG 499
           LGAEGEP+FVNHF+WSKGFPLYG NYGSVLEAIDKMEKDLPGFFYAGNHRGG
Sbjct: 419 LGAEGEPAFVNHFFWSKGFPLYGHNYGSVLEAIDKMEKDLPGFFYAGNHRGG 470


>Medtr1g085730.1 | protoporphyrinogen IX oxidase | HC |
           chr1:38320812-38326944 | 20130731
          Length = 551

 Score =  155 bits (393), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 210/449 (46%), Gaps = 30/449 (6%)

Query: 63  SHGL-DVTVFEADGRAGGKLKSVSQDGLVWDEGANTMIENGMEVTGLIDALGLQEKQQFP 121
           +HG+ +V V EA  R GG + +V +DG +W+EG N+   +   +T ++D+ GL++     
Sbjct: 94  AHGVPNVVVTEAKDRVGGNIITVERDGFLWEEGPNSFQPSDPMLTMVVDS-GLKDDLVLG 152

Query: 122 ISQHKRYIVKNGTPLLVPTNPVXXXXXXXXXXXXXIRIIFEPLMWKRSDSSKVCDEDSQE 181
                R+++ NG    VP  P              IR  F  L  +            +E
Sbjct: 153 DPDAPRFVLWNGKLRPVPGKPTDLPFFDLMSIGGKIRAGFGALGIRPPPPGH------EE 206

Query: 182 SVGRFFERHFGKEVVEYLIDPFVGGTSAADPESLSVRHSFPELWNLEKRFGSIIAGALQS 241
           SV  F  R+ G EV E LI+PF  G  A DP  LS++ +F ++W LE+  GSII GA ++
Sbjct: 207 SVEEFVRRNLGAEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWRLEQNGGSIIGGAFKA 266

Query: 242 NLFAKRNKTGETKVAQRKNKPKRGSF-SFQGGMQTLTDTLCKELGKDDLKLNAKVLTLAY 300
               +RNK  +     R  KPK  +  SF+ G+  L + +   LG + +KL+ K+L+++ 
Sbjct: 267 --IQERNKVSKPPRDPRLPKPKGQTVGSFRKGLTMLPNAISARLG-NKVKLSWKLLSISK 323

Query: 301 SHDGXXXXXXXXXXXXXXXXXPVVDAIIMTAPLCNVKDIKISKRGTPFPLNFLPEVTYLP 360
              G                      +IMT P  +V    + +  +P   + L +  Y P
Sbjct: 324 LDSGEYSLTYETPEGVVSLQS---KTVIMTIP-SHVAS-PLLRPLSPAAADALSKFYYPP 378

Query: 361 LSVIISTFKKENVKR------PLDGFGVLVPSKEQQNGFKTMGTLFSSIMFPDRAPSDLY 414
           ++ +  ++ KE ++        L GFG L P   +  G +T+GT++SS +FP+RAP    
Sbjct: 379 VAAVSISYPKEAIRSECLIDGELKGFGQLHP---RSQGVQTLGTIYSSSLFPNRAPPGRV 435

Query: 415 LYTTFVGGSRNMELAQASTDELKKIVTSDLRKLL--GAEGEPSFVNHFYWSKGFPLYGRN 472
           L   ++GG+ N  +   +  EL + V  DLRK+L      +P  +    W +  P +   
Sbjct: 436 LLLNYIGGATNSGILSKTEGELVEAVDRDLRKILINPNAQDPIVLGVRVWPQAIPQFLVG 495

Query: 473 YGSVLEAIDKMEKD--LPGFFYAGNHRGG 499
           +  +L+A     K+    G F  GN+  G
Sbjct: 496 HLDLLDAAKVSLKNTGFEGLFLGGNYVSG 524


>Medtr1g085730.2 | protoporphyrinogen IX oxidase | HC |
           chr1:38320812-38326921 | 20130731
          Length = 394

 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 122/244 (50%), Gaps = 12/244 (4%)

Query: 63  SHGL-DVTVFEADGRAGGKLKSVSQDGLVWDEGANTMIENGMEVTGLIDALGLQEKQQFP 121
           +HG+ +V V EA  R GG + +V +DG +W+EG N+   +   +T ++D+ GL++     
Sbjct: 94  AHGVPNVVVTEAKDRVGGNIITVERDGFLWEEGPNSFQPSDPMLTMVVDS-GLKDDLVLG 152

Query: 122 ISQHKRYIVKNGTPLLVPTNPVXXXXXXXXXXXXXIRIIFEPLMWKRSDSSKVCDEDSQE 181
                R+++ NG    VP  P              IR  F  L  +            +E
Sbjct: 153 DPDAPRFVLWNGKLRPVPGKPTDLPFFDLMSIGGKIRAGFGALGIRPPPPGH------EE 206

Query: 182 SVGRFFERHFGKEVVEYLIDPFVGGTSAADPESLSVRHSFPELWNLEKRFGSIIAGALQS 241
           SV  F  R+ G EV E LI+PF  G  A DP  LS++ +F ++W LE+  GSII GA ++
Sbjct: 207 SVEEFVRRNLGAEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWRLEQNGGSIIGGAFKA 266

Query: 242 NLFAKRNKTGETKVAQRKNKPKRGSF-SFQGGMQTLTDTLCKELGKDDLKLNAKVLTLAY 300
               +RNK  +     R  KPK  +  SF+ G+  L + +   LG + +KL+ K+L+++ 
Sbjct: 267 --IQERNKVSKPPRDPRLPKPKGQTVGSFRKGLTMLPNAISARLG-NKVKLSWKLLSISK 323

Query: 301 SHDG 304
              G
Sbjct: 324 LDSG 327