Miyakogusa Predicted Gene

Lj1g3v3754960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3754960.1 tr|B9NHA2|B9NHA2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584780 PE=4
SV=1,37.5,0.000000000000005,UBX-RELATED,NULL; UBX,UBX; seg,NULL;
Ubiquitin-like,NULL; no description,NULL,CUFF.31152.1
         (262 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g023080.1 | tether containing UBX domain for GLUT4-like pr...   211   8e-55
Medtr0531s0010.1 | tether containing UBX domain for GLUT4-like p...   201   8e-52
Medtr6g022770.1 | tether containing UBX domain for GLUT4-like pr...   162   4e-40
Medtr4g103350.1 | tether containing UBX domain for GLUT4-like pr...   127   8e-30

>Medtr6g023080.1 | tether containing UBX domain for GLUT4-like
           protein | HC | chr6:8019916-8017768 | 20130731
          Length = 204

 Score =  211 bits (536), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 107/182 (58%), Positives = 130/182 (71%), Gaps = 3/182 (1%)

Query: 81  EDYIRISSIKKPEPILKTRKMXXXXXXXXKSKMTRAVIRVRFPDNHTLEATFDPSETIQT 140
           EDY +I + KK +  LKTRK+        +S++T+AVIRVRFPDNHTLEATF PSETIQ+
Sbjct: 26  EDYYKILATKKEDNFLKTRKLRDADLAARRSRITKAVIRVRFPDNHTLEATFHPSETIQS 85

Query: 141 LIDLLIKVIAQPEQPFYIYTVPPKKLITNMSQDFYAAGFCPGALVNFSYDVSKGGSAVDL 200
           LIDLL KVIAQPE+PFY+YT PPKKL+ ++SQDFY  GFCPGA+V FSYDVSKG S+ D 
Sbjct: 86  LIDLLKKVIAQPEKPFYLYTTPPKKLVKDISQDFYTVGFCPGAIVYFSYDVSKGDSSDD- 144

Query: 201 NSPYLREEILSLKGSDAANDQGQQSELVQSXXXXXXXXXXXXXXXXXXXAQKKLVKPKWL 260
             PYL EE++SLKG + ++D+GQ S   QS                   A+KKLVKPKWL
Sbjct: 145 -GPYLPEEVMSLKGLNFSDDKGQSSNPAQS-EPVSAEPVVQPPAEERKPAEKKLVKPKWL 202

Query: 261 KM 262
           KM
Sbjct: 203 KM 204


>Medtr0531s0010.1 | tether containing UBX domain for GLUT4-like
           protein | HC | scaffold0531:151-1858 | 20130731
          Length = 166

 Score =  201 bits (510), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 101/168 (60%), Positives = 121/168 (72%), Gaps = 3/168 (1%)

Query: 95  ILKTRKMXXXXXXXXKSKMTRAVIRVRFPDNHTLEATFDPSETIQTLIDLLIKVIAQPEQ 154
            LKTRK+        +S++T+AVIRVRFPDNHTLEATF PSETIQ+LIDLL KVIAQPE+
Sbjct: 2   FLKTRKLRDADLAARRSRITKAVIRVRFPDNHTLEATFHPSETIQSLIDLLKKVIAQPEK 61

Query: 155 PFYIYTVPPKKLITNMSQDFYAAGFCPGALVNFSYDVSKGGSAVDLNSPYLREEILSLKG 214
           PFY+YT PPKKL+ ++SQDFY  GFCPGA+V FSYDVSKG S+ D   PYL EE++SLKG
Sbjct: 62  PFYLYTTPPKKLVKDISQDFYTVGFCPGAIVYFSYDVSKGDSSDD--GPYLPEEVMSLKG 119

Query: 215 SDAANDQGQQSELVQSXXXXXXXXXXXXXXXXXXXAQKKLVKPKWLKM 262
            + ++D+GQ S   QS                   A+KKLVKPKWLKM
Sbjct: 120 LNFSDDKGQSSNPAQS-EPVSAEPVVQPPAEERKPAEKKLVKPKWLKM 166


>Medtr6g022770.1 | tether containing UBX domain for GLUT4-like
           protein | HC | chr6:7965999-7967854 | 20130731
          Length = 182

 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/184 (47%), Positives = 113/184 (61%), Gaps = 36/184 (19%)

Query: 7   FPLASKRRRLTNTYSSAMDSEAAKAKLAAMTERYGREFHVFETSTFXXXXXXXXXXXXQL 66
           FP  SKRRR+TN +S A           +M E++G                         
Sbjct: 34  FPQISKRRRVTNVHSMAT--------TESMNEKFG------------------------- 60

Query: 67  NVEEEETDDL-EFSPEDYIRISSIKKPEPILKTRKMXXXXXXXXKSKMTRAVIRVRFPDN 125
             +EEETDD  EF+ EDY ++ + KK +  LKT+K+        +S++T+AVIRVRFPDN
Sbjct: 61  --QEEETDDYYEFTAEDYYKLLATKKEDKFLKTKKLREAEVAARRSRITKAVIRVRFPDN 118

Query: 126 HTLEATFDPSETIQTLIDLLIKVIAQPEQPFYIYTVPPKKLITNMSQDFYAAGFCPGALV 185
           H LEATF PS+TI++LIDL+ K IAQP++PFY+YT PPKKLI + SQDFY AGF PGA+V
Sbjct: 119 HILEATFHPSDTIKSLIDLIDKEIAQPDKPFYLYTTPPKKLIKDFSQDFYTAGFSPGAIV 178

Query: 186 NFSY 189
             SY
Sbjct: 179 YLSY 182


>Medtr4g103350.1 | tether containing UBX domain for GLUT4-like
           protein, putative | HC | chr4:42700450-42698804 |
           20130731
          Length = 146

 Score =  127 bits (320), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/104 (63%), Positives = 78/104 (75%), Gaps = 8/104 (7%)

Query: 116 AVIRVRFPDNHTLEATFDPSETIQTLIDLLIKVIAQPEQPFYIYTVPPKK-LITNMSQDF 174
           AV RV FPDNHTLEATF+PSETIQ+L+DLL KVI        ++T+ PKK LI ++SQDF
Sbjct: 26  AVFRVCFPDNHTLEATFNPSETIQSLVDLLNKVIL-----ILLHTITPKKKLIKDVSQDF 80

Query: 175 YAAGFCPGALVNFSYDVSKGGSAVDLNSPYLREEILSLKGSDAA 218
           Y AGFCPGA+V FSYDVSKG S+ D   PYL E ++SLKG D  
Sbjct: 81  YTAGFCPGAIVYFSYDVSKGDSSHD--GPYLLEGVMSLKGLDGC 122