Miyakogusa Predicted Gene

Lj1g3v3750670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3750670.1 Non Characterized Hit- tr|I3T233|I3T233_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,77.19,3e-19,SUBFAMILY NOT NAMED,NULL; CYSTINOSIN,Lysosomal cystine
transporter; PQ-loop,NULL; Repeated motif pre,CUFF.31137.1
         (59 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0018s0310.1 | lysosomal cystine transporter family protein ...   113   3e-26
Medtr0018s0320.1 | lysosomal cystine transporter family protein ...   100   2e-22
Medtr6g022190.1 | lysosomal cystine transporter family protein |...    89   1e-18
Medtr6g022180.1 | cystinosin-like protein | HC | chr6:7717811-77...    81   2e-16
Medtr6g022210.1 | cystinosin-like protein | HC | chr6:7735708-77...    77   5e-15

>Medtr0018s0310.1 | lysosomal cystine transporter family protein |
          HC | scaffold0018:182962-186863 | 20130731
          Length = 270

 Score =  113 bits (283), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 52/57 (91%), Positives = 56/57 (98%)

Query: 3  SSWNSEPLHVSYEALGWFAFVCWSISFYPQVILNFRRKSVVGLNFDFIVLNLTKHTA 59
          SSWNS PLHVSYEALGWFAFVCWSISF+PQVILNFRRKSVVGLNFDF++LNLTKHT+
Sbjct: 2  SSWNSVPLHVSYEALGWFAFVCWSISFWPQVILNFRRKSVVGLNFDFVLLNLTKHTS 58


>Medtr0018s0320.1 | lysosomal cystine transporter family protein |
          HC | scaffold0018:192920-188511 | 20130731
          Length = 277

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 3  SSWNSEPLHVSYEALGWFAFVCWSISFYPQVILNFRRKSVVGLNFDFIVLNLTKHTA 59
          +SWNS  L V+YE LGWFAF+ WSISFYPQVILNFRRKSVVGLNFDF++LNLTKH++
Sbjct: 2  ASWNSVSLEVTYEVLGWFAFIVWSISFYPQVILNFRRKSVVGLNFDFVLLNLTKHSS 58


>Medtr6g022190.1 | lysosomal cystine transporter family protein |
          HC | chr6:7726370-7731179 | 20130731
          Length = 270

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 46/55 (83%)

Query: 3  SSWNSEPLHVSYEALGWFAFVCWSISFYPQVILNFRRKSVVGLNFDFIVLNLTKH 57
          +SWNS  L V+YE LGW AFV WSISFYPQ+ILNF+RKSVVGLNFD+ VLN+ K 
Sbjct: 2  ASWNSIKLRVTYEVLGWSAFVSWSISFYPQIILNFQRKSVVGLNFDYAVLNMVKQ 56


>Medtr6g022180.1 | cystinosin-like protein | HC |
          chr6:7717811-7722963 | 20130731
          Length = 279

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 44/56 (78%)

Query: 3  SSWNSEPLHVSYEALGWFAFVCWSISFYPQVILNFRRKSVVGLNFDFIVLNLTKHT 58
          ++WNSE   ++Y   GW AFV WS SFYPQ ILN+ RKSVVGLNF++++LN TKHT
Sbjct: 4  TAWNSETFKIAYTVFGWIAFVVWSSSFYPQFILNYSRKSVVGLNFNYLILNNTKHT 59


>Medtr6g022210.1 | cystinosin-like protein | HC |
          chr6:7735708-7738616 | 20130731
          Length = 276

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 5  WNSEPLHVSYEALGWFAFVCWSISFYPQVILNFRRKSVVGLNFDFIVLNLTKH 57
          WNS PL + Y+  GW AF+ WS++ YPQ+I NFRRKSVVGL+ D+ +LN TKH
Sbjct: 4  WNSFPLQIIYQIFGWLAFLSWSLAGYPQLISNFRRKSVVGLSLDYTILNFTKH 56