Miyakogusa Predicted Gene

Lj1g3v3740570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3740570.1 Non Characterized Hit- tr|I1MLQ8|I1MLQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5536
PE=,82.04,0,Fer2_3,Succinate dehydogenase/fumarate reductase
N-terminal; Fer4_17,NULL; dhsB: succinate dehydroge,CUFF.31151.1
         (282 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g492610.1 | succinate dehydrogenase [ubiquinone] iron-sulf...   453   e-128
Medtr0018s0260.1 | succinate dehydrogenase [ubiquinone] iron-sul...   452   e-127

>Medtr1g492610.1 | succinate dehydrogenase [ubiquinone] iron-sulfur
           subunit | HC | chr1:41503746-41508477 | 20130731
          Length = 278

 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 213/253 (84%), Positives = 226/253 (89%)

Query: 30  AHAPETQDQQGEPKASETTRMKKFQIYRWNPENPTKPELKEYTIKLKDSGPMVLDALIKI 89
           AHA E Q QQ  PKA +TT +KKFQIYRWNP+ P+KPELKEY I LK+ GPMVLDALIKI
Sbjct: 26  AHASEAQAQQASPKARDTTVLKKFQIYRWNPDTPSKPELKEYEINLKECGPMVLDALIKI 85

Query: 90  KNEVDQTLTFRRSCREGICGSCAMNIDGCNGLACLTEIPSEAKETTVTPLPHMFGIKDLV 149
           KN++D +LTFRRSCREGICGSCAMNIDGCNGLACLT+IP    ++T+TPLPHMF IKDLV
Sbjct: 86  KNDIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPDAGMDSTITPLPHMFVIKDLV 145

Query: 150 VDMTNFYQQYKSIEPWLKRKSPPPVPGKEILQSKKDREKLDGMYECILCACCSTSCPSYW 209
           VDMTNFY QYKSIEPWLKRKSP    GKEI QSKKDR KLDGMYECILCACCSTSCPSYW
Sbjct: 146 VDMTNFYNQYKSIEPWLKRKSPAEEDGKEIKQSKKDRAKLDGMYECILCACCSTSCPSYW 205

Query: 210 WNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPG 269
           WNPESYLGPAALLHANRWISDSRDEYTKERLEAI+DEFKLYRCHTILNCARACPKGLNPG
Sbjct: 206 WNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPG 265

Query: 270 KQIQQIKSAQPKA 282
           KQI  IKS QPKA
Sbjct: 266 KQIAHIKSLQPKA 278


>Medtr0018s0260.1 | succinate dehydrogenase [ubiquinone] iron-sulfur
           subunit | HC | scaffold0018:155379-159912 | 20130731
          Length = 278

 Score =  452 bits (1164), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/253 (84%), Positives = 226/253 (89%)

Query: 30  AHAPETQDQQGEPKASETTRMKKFQIYRWNPENPTKPELKEYTIKLKDSGPMVLDALIKI 89
           AHA E Q QQ  PKA +TT +KKFQIYRWNP+ P+KPELKEY I LK+ GPMVLDALIKI
Sbjct: 26  AHASEAQAQQVSPKARDTTVLKKFQIYRWNPDTPSKPELKEYEINLKECGPMVLDALIKI 85

Query: 90  KNEVDQTLTFRRSCREGICGSCAMNIDGCNGLACLTEIPSEAKETTVTPLPHMFGIKDLV 149
           KN++D +LTFRRSCREGICGSCAMNIDGCNGLACLT+IP    ++T+TPLPHMF IKDLV
Sbjct: 86  KNDIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPDAGTDSTITPLPHMFVIKDLV 145

Query: 150 VDMTNFYQQYKSIEPWLKRKSPPPVPGKEILQSKKDREKLDGMYECILCACCSTSCPSYW 209
           VDMTNFY QYKSIEPWLKRKSP    GKEI QSKKDR KLDGMYECILCACCSTSCPSYW
Sbjct: 146 VDMTNFYNQYKSIEPWLKRKSPAEEDGKEIRQSKKDRAKLDGMYECILCACCSTSCPSYW 205

Query: 210 WNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPG 269
           WNPESYLGPAALLHANRWISDSRDEYTKERLEAI+DEFKLYRCHTILNCARACPKGLNPG
Sbjct: 206 WNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPG 265

Query: 270 KQIQQIKSAQPKA 282
           KQI  IKS QPKA
Sbjct: 266 KQIAHIKSLQPKA 278