Miyakogusa Predicted Gene

Lj1g3v3740540.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3740540.2 Non Characterized Hit- tr|K3YMG1|K3YMG1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si015440,67.74,0.025,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.31134.2
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g031900.1 | transmembrane protein, putative | HC | chr7:11...   347   9e-96
Medtr6g022160.1 | transmembrane protein, putative | HC | chr6:77...   278   4e-75
Medtr3g082330.1 | transmembrane protein, putative | HC | chr3:37...   244   5e-65
Medtr3g082410.1 | transmembrane protein, putative | HC | chr3:37...   244   6e-65

>Medtr7g031900.1 | transmembrane protein, putative | HC |
           chr7:11215732-11207419 | 20130731
          Length = 582

 Score =  347 bits (889), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 172/259 (66%), Positives = 196/259 (75%)

Query: 1   MEPPTGFCASLSSXXXXXXXXXXXXXXXXXXXXXFFPLTCLIITIGNSAIILGLWPAHVV 60
           MEPP+G  ASL S                       PL CLII+IGN  II+GLWP HV+
Sbjct: 1   MEPPSGVLASLWSFILFLPFFIGLLLLGIIKGVIICPLACLIISIGNFGIIIGLWPVHVI 60

Query: 61  WTYYCVVRAKHIGPFLKLIICTCVLPVLLISWPLGGILGSIVGGAALGYLSPIFATFEAV 120
           W+YYCV+RAK +GP LK +IC  VLPVLL  WP+ GI GSIVGG A G L PIF+T + V
Sbjct: 61  WSYYCVLRAKQLGPSLKAVICIFVLPVLLTLWPILGIFGSIVGGGAYGLLQPIFSTIQGV 120

Query: 121 EEGKDDKLFHCFIDGTWSTLERSCMVVRDVRDVCFYSYFSVMDDLREKGPPNRKYYEIRL 180
           +EGK+DKL HC  DGT STLERSCMVV+D++DVC+ SYFSVMDDLR  GPP+ KYYEIRL
Sbjct: 121 DEGKEDKLRHCLTDGTRSTLERSCMVVQDLKDVCYVSYFSVMDDLRNNGPPDSKYYEIRL 180

Query: 181 HYLPGALMATVIGIIVDVPVISFIALCKGPYMLFKGWHRLFHDLIGSEGPFLETICVPLA 240
            YLP A++A +IGII+DVPVIS +AL K PYMLFKGWHRLFHDLIG EGPFLETICVP A
Sbjct: 181 LYLPVAVLAALIGIIIDVPVISTVALFKCPYMLFKGWHRLFHDLIGREGPFLETICVPFA 240

Query: 241 GLAILLWPLAVTGAVLASM 259
           GLAILLWPLAV GAV+ SM
Sbjct: 241 GLAILLWPLAVAGAVVVSM 259


>Medtr6g022160.1 | transmembrane protein, putative | HC |
           chr6:7709158-7715024 | 20130731
          Length = 501

 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 130/180 (72%), Positives = 155/180 (86%)

Query: 80  ICTCVLPVLLISWPLGGILGSIVGGAALGYLSPIFATFEAVEEGKDDKLFHCFIDGTWST 139
           +CT +LPVLLI WP+ GI+GSIVGGAA G+LSP+FATFEA+E  K++K FHCFIDGTWST
Sbjct: 1   MCTILLPVLLILWPVLGIVGSIVGGAAYGFLSPLFATFEAIEGEKENKTFHCFIDGTWST 60

Query: 140 LERSCMVVRDVRDVCFYSYFSVMDDLREKGPPNRKYYEIRLHYLPGALMATVIGIIVDVP 199
           + ++  +V DVRD CF++YFSVMDDLR+ G PN KYYEIR HY PGA++A ++GIIVDVP
Sbjct: 61  ILKTFDIVMDVRDACFHTYFSVMDDLRQDGLPNGKYYEIRPHYFPGAVVAAILGIIVDVP 120

Query: 200 VISFIALCKGPYMLFKGWHRLFHDLIGSEGPFLETICVPLAGLAILLWPLAVTGAVLASM 259
           +IS +ALCK PYMLFKGW+RLF DLIG EGPFLETICVP AGLAILLWPLAV GA +AS+
Sbjct: 121 IISIVALCKVPYMLFKGWNRLFRDLIGREGPFLETICVPFAGLAILLWPLAVVGAFIASV 180


>Medtr3g082330.1 | transmembrane protein, putative | HC |
           chr3:37154045-37157575 | 20130731
          Length = 555

 Score =  244 bits (623), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 121/223 (54%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 37  PLTCLIITIGNSAIILGLWPAHVVWTYYCVVRAKHIGPFLKLIICTCVLPVLLISWPLGG 96
           P+   I+ +GNSA+I+GLW AHV WTYYCV R K  G   K+    C+   LL+  P+ G
Sbjct: 37  PIAFAIMVVGNSAVIIGLWTAHVFWTYYCVARTKRFGLVFKIAALICLPVPLLLL-PVVG 95

Query: 97  ILGSIVGGAALGYLSPIFATFEAVEEGKDDKLFHCFIDGTWSTLERSCMVVRDVRDVCFY 156
           I+GS +GG   G+ +P+ ATFE V E   DK +HCFIDG WST++ SC VV+DV D CF+
Sbjct: 96  IVGSFLGGIGYGFFAPLLATFEVVGENVQDKFYHCFIDGCWSTIQTSCTVVQDVTDFCFH 155

Query: 157 SYFSVMDDLREKGPPNRKYYEIRLHYLPGALMATVIGIIVDVPVISFIALCKGPYMLFKG 216
           SYFS MD+LRE   P  K ++I+L  LP  L+  ++G+  DV +I+ IA+ K PYMLF+G
Sbjct: 156 SYFSYMDELRENLNPQEKPFDIKLSLLPCCLLVILVGVPFDVVLITSIAIWKSPYMLFRG 215

Query: 217 WHRLFHDLIGSEGPFLETICVPLAGLAILLWPLAVTGAVLASM 259
           W RL  DL+G  GPFLET CVP AGLAI+LWPLAV GAVLA++
Sbjct: 216 WKRLLEDLVGRRGPFLETECVPFAGLAIILWPLAVLGAVLAAI 258


>Medtr3g082410.1 | transmembrane protein, putative | HC |
           chr3:37199400-37202930 | 20130731
          Length = 555

 Score =  244 bits (623), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 121/223 (54%), Positives = 156/223 (69%), Gaps = 1/223 (0%)

Query: 37  PLTCLIITIGNSAIILGLWPAHVVWTYYCVVRAKHIGPFLKLIICTCVLPVLLISWPLGG 96
           P+   I+ +GNSA+I+GLW AHV WTYYCV R K  G   K+    C+   LL+  P+ G
Sbjct: 37  PIAFAIMVVGNSAVIIGLWTAHVFWTYYCVARTKRFGLVFKIAALICLPVPLLLL-PVVG 95

Query: 97  ILGSIVGGAALGYLSPIFATFEAVEEGKDDKLFHCFIDGTWSTLERSCMVVRDVRDVCFY 156
           I+GS +GG   G+ +P+ ATFE V E   DK +HCFIDG WST++ SC VV+DV D CF+
Sbjct: 96  IVGSFLGGIGYGFFAPLLATFEVVGENVQDKFYHCFIDGCWSTIQTSCTVVQDVTDFCFH 155

Query: 157 SYFSVMDDLREKGPPNRKYYEIRLHYLPGALMATVIGIIVDVPVISFIALCKGPYMLFKG 216
           SYFS MD+LRE   P  K ++I+L  LP  L+  ++G+  DV +I+ IA+ K PYMLF+G
Sbjct: 156 SYFSYMDELRENLNPQEKPFDIKLSLLPCCLLVILVGVPFDVVLITSIAIWKSPYMLFRG 215

Query: 217 WHRLFHDLIGSEGPFLETICVPLAGLAILLWPLAVTGAVLASM 259
           W RL  DL+G  GPFLET CVP AGLAI+LWPLAV GAVLA++
Sbjct: 216 WKRLLEDLVGRRGPFLETECVPFAGLAIILWPLAVLGAVLAAI 258