Miyakogusa Predicted Gene

Lj1g3v3719150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3719150.1 Non Characterized Hit- tr|I3SGU4|I3SGU4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,74.19,0.0001,
,65393_g.1
         (58 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g032630.1 | glycerol-3-phosphate dehydrogenase, NAD | HC |...    99   1e-21
Medtr6g021915.1 | glycerol-3-phosphate dehydrogenase, NAD | HC |...    95   2e-20

>Medtr7g032630.1 | glycerol-3-phosphate dehydrogenase, NAD | HC |
           chr7:11457063-11461747 | 20130731
          Length = 348

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 53/58 (91%)

Query: 1   MKGLCKSLAGKIRTDAQGISLIKGMEVKKEGPSMISTLISKQLGINCSVLMGANIADE 58
           M+G+CK L GKIRTDA+GISL+KGMEVKKEG SMISTLIS QL INCSVLMGANIA+E
Sbjct: 97  MEGICKRLDGKIRTDAEGISLVKGMEVKKEGASMISTLISNQLKINCSVLMGANIANE 154


>Medtr6g021915.1 | glycerol-3-phosphate dehydrogenase, NAD | HC |
           chr6:7575111-7571244 | 20130731
          Length = 352

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/58 (77%), Positives = 53/58 (91%)

Query: 1   MKGLCKSLAGKIRTDAQGISLIKGMEVKKEGPSMISTLISKQLGINCSVLMGANIADE 58
           M+G+CK +AGKIR DA+ ISL+KGMEVK EGP MISTLIS++LGINCSVLMGANIA+E
Sbjct: 124 MEGICKRIAGKIRADAEAISLVKGMEVKMEGPCMISTLISEELGINCSVLMGANIANE 181