Miyakogusa Predicted Gene

Lj1g3v3716950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3716950.1 tr|G7K6H8|G7K6H8_MEDTR Exportin-1 OS=Medicago
truncatula GN=MTR_5g007790 PE=4 SV=1,91.24,0,EXPORTIN 1 (CHROMOSOME
REGION MAINTENANCE PROTEIN 1),NULL; EXPORTIN 1/5,NULL; CRM1 C
terminal,CRM1 C,CUFF.31112.1
         (350 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g007790.1 | chromosome region maintenance protein 1/export...   643   0.0  
Medtr4g077660.1 | chromosome region maintenance protein 1/export...   635   0.0  
Medtr4g077660.2 | chromosome region maintenance protein 1/export...   635   0.0  
Medtr8g013700.1 | chromosome region maintenance protein 1/export...   521   e-148

>Medtr5g007790.1 | chromosome region maintenance protein 1/exportin
           | HC | chr5:1516370-1530958 | 20130731
          Length = 1078

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/331 (91%), Positives = 318/331 (96%)

Query: 10  IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
           ++ S   YVVGQYPRFLRAHWKFLKTVVNKLFEFMHE+HPGVQDMACDTFLKIVQKC+RK
Sbjct: 545 VIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCRRK 604

Query: 70  FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
           FVITQ+GENEPFVSELLSGLSTTI DLEPHQIHTFYESVGSM+QAESDSQKRDEYLQRLM
Sbjct: 605 FVITQVGENEPFVSELLSGLSTTIADLEPHQIHTFYESVGSMIQAESDSQKRDEYLQRLM 664

Query: 130 HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
            LPNQKW+EIIGQARQN DFLKD DVIRTVLN+LQTNTSVASSLGTYFLPQI+LIFLDML
Sbjct: 665 VLPNQKWMEIIGQARQNADFLKDQDVIRTVLNVLQTNTSVASSLGTYFLPQITLIFLDML 724

Query: 190 NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
           NVYRMYSELISKSIAEG P+ SRTS+VKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP
Sbjct: 725 NVYRMYSELISKSIAEGTPFTSRTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 784

Query: 250 PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
           PMMDPVLGDYARNVPDARESEVLSLFATI+NKYKA+M+ED+P IFEAVFQCTLEMITKNF
Sbjct: 785 PMMDPVLGDYARNVPDARESEVLSLFATIINKYKASMIEDIPHIFEAVFQCTLEMITKNF 844

Query: 310 EDYPEHRLKFFSLLCAIATHCFHALICLSSQ 340
           EDYPEHRLKFFSLL AIATHCF ALICLSSQ
Sbjct: 845 EDYPEHRLKFFSLLRAIATHCFPALICLSSQ 875


>Medtr4g077660.1 | chromosome region maintenance protein 1/exportin
           | HC | chr4:29752243-29739549 | 20130731
          Length = 1077

 Score =  635 bits (1637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/331 (90%), Positives = 314/331 (94%)

Query: 10  IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
           ++ S   YVVGQYPRFLRAHWKFLKTVVNKLFEFMHE+HPGVQDMACDTFLKIVQKCKRK
Sbjct: 544 VIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRK 603

Query: 70  FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
           FVITQ+GENEPFVSELLSGL  TI DLEPHQIH+FYESV  M+QAESDSQKRDE+LQRLM
Sbjct: 604 FVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDSQKRDEFLQRLM 663

Query: 130 HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
            LPNQKW+EIIGQA QNVDFLKD DVIRTVLNILQTNTSVASSLGT+FLPQI++IFLDML
Sbjct: 664 ELPNQKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQITMIFLDML 723

Query: 190 NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
           NVYRMYSELISKSI EGGPYAS+TS+VKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP
Sbjct: 724 NVYRMYSELISKSILEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 783

Query: 250 PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
           PMMDPVLGDYARN PDARESEVLSLFATIVNKYKA M+EDVPRIFEAVFQCTLEMITKNF
Sbjct: 784 PMMDPVLGDYARNAPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMITKNF 843

Query: 310 EDYPEHRLKFFSLLCAIATHCFHALICLSSQ 340
           EDYPEHRLKFFSLL AIATHCF ALICLSSQ
Sbjct: 844 EDYPEHRLKFFSLLRAIATHCFPALICLSSQ 874


>Medtr4g077660.2 | chromosome region maintenance protein 1/exportin
           | HC | chr4:29752243-29739549 | 20130731
          Length = 1077

 Score =  635 bits (1637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/331 (90%), Positives = 314/331 (94%)

Query: 10  IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
           ++ S   YVVGQYPRFLRAHWKFLKTVVNKLFEFMHE+HPGVQDMACDTFLKIVQKCKRK
Sbjct: 544 VIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRK 603

Query: 70  FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
           FVITQ+GENEPFVSELLSGL  TI DLEPHQIH+FYESV  M+QAESDSQKRDE+LQRLM
Sbjct: 604 FVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDSQKRDEFLQRLM 663

Query: 130 HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
            LPNQKW+EIIGQA QNVDFLKD DVIRTVLNILQTNTSVASSLGT+FLPQI++IFLDML
Sbjct: 664 ELPNQKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQITMIFLDML 723

Query: 190 NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
           NVYRMYSELISKSI EGGPYAS+TS+VKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP
Sbjct: 724 NVYRMYSELISKSILEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 783

Query: 250 PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
           PMMDPVLGDYARN PDARESEVLSLFATIVNKYKA M+EDVPRIFEAVFQCTLEMITKNF
Sbjct: 784 PMMDPVLGDYARNAPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMITKNF 843

Query: 310 EDYPEHRLKFFSLLCAIATHCFHALICLSSQ 340
           EDYPEHRLKFFSLL AIATHCF ALICLSSQ
Sbjct: 844 EDYPEHRLKFFSLLRAIATHCFPALICLSSQ 874


>Medtr8g013700.1 | chromosome region maintenance protein 1/exportin
           | HC | chr8:4198075-4201131 | 20130731
          Length = 932

 Score =  521 bits (1341), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/341 (75%), Positives = 288/341 (84%), Gaps = 17/341 (4%)

Query: 9   NIVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKR 68
           +++ S   YVVG+YP+FLRAH KFLK V+NKLFEFMH +HP VQDMACDT LKIV+ C+R
Sbjct: 459 SVIASNIMYVVGEYPQFLRAHSKFLKAVMNKLFEFMHNTHPRVQDMACDTILKIVRNCRR 518

Query: 69  KFVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRL 128
           KFVITQ+GENEPFVSELLSGLSTTI DL+PHQIHTFYESVGSM+QAES+SQKRDEY  RL
Sbjct: 519 KFVITQVGENEPFVSELLSGLSTTIADLKPHQIHTFYESVGSMIQAESNSQKRDEYFLRL 578

Query: 129 MHLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDM 188
           M LPNQK LEIIGQA QNVDFLKD DVI+T LN LQTNT VASSLGTYFLPQ++LIF +M
Sbjct: 579 MVLPNQKLLEIIGQAGQNVDFLKDQDVIQTFLNTLQTNTRVASSLGTYFLPQMTLIFSNM 638

Query: 189 LNVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFV 248
           LNVYRMYSEL+SKSIAEGGP ASRT++VKL+RSVKRE LKLIETFLDKAE QPQIGKQFV
Sbjct: 639 LNVYRMYSELMSKSIAEGGPLASRTAYVKLVRSVKREILKLIETFLDKAEAQPQIGKQFV 698

Query: 249 PPMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKN 308
           PPMMD VL DY +N+PDARESEVLSLFATI+NKYKA+M                 MIT+N
Sbjct: 699 PPMMDLVLRDYVKNMPDARESEVLSLFATIINKYKASM----------------NMITEN 742

Query: 309 FEDYPEHRLKFFSLLCAIATHCFHALICLSS-QVVFLAPSL 348
           FEDYPEHRL  FSLL  IATHCF ALI LSS Q++F+  S+
Sbjct: 743 FEDYPEHRLNIFSLLRTIATHCFPALISLSSRQLMFVMDSI 783