Miyakogusa Predicted Gene
- Lj1g3v3716210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3716210.1 tr|A9U4J6|A9U4J6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173637,32.08,2e-17,CoA-dependent
acyltransferases,NULL,CUFF.31104.1
(191 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g059760.1 | condensation domain protein | HC | chr1:260010... 326 9e-90
>Medtr1g059760.1 | condensation domain protein | HC |
chr1:26001006-26006585 | 20130731
Length = 469
Score = 326 bits (835), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 170/187 (90%)
Query: 5 WTSKDLPEYQREKYAVVTLIDCRSILDPVLRSNQSGFYHSAILNTHDVCGEPLWDLAKRS 64
W SK LP+YQ EKYAVVTLIDCR +LDPVL S+ GFYHSAILNTHDVCGE LW+LAKRS
Sbjct: 283 WVSKHLPDYQSEKYAVVTLIDCRPLLDPVLSSSHCGFYHSAILNTHDVCGETLWELAKRS 342
Query: 65 YTAYVDAMNSNKHFSDMNDLNFLMCKAIENPGLTPSSSLRTALISVFEDAVIDDSSKVHE 124
YT++ +A++ NKHFSDM DLNFLMCKAI+NPGLTPSSSLRTAL+SVF+D VIDDS+++HE
Sbjct: 343 YTSFENALSYNKHFSDMADLNFLMCKAIDNPGLTPSSSLRTALVSVFDDLVIDDSNEMHE 402
Query: 125 ELGLEDYVGCASTHGVGPSVAIFDTVRNGKLDCACIYPSPLHSREQIQGLVDDMKRILVE 184
ELGLEDY+GCAS HGVGPS+A+FD +RNGKLDCACIYPSPLHSREQIQ LVD MKRILV+
Sbjct: 403 ELGLEDYLGCASAHGVGPSLAMFDAIRNGKLDCACIYPSPLHSREQIQELVDHMKRILVD 462
Query: 185 GCNSENQ 191
CNSENQ
Sbjct: 463 ACNSENQ 469