Miyakogusa Predicted Gene

Lj1g3v3716210.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3716210.1 tr|A9U4J6|A9U4J6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173637,32.08,2e-17,CoA-dependent
acyltransferases,NULL,CUFF.31104.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g059760.1 | condensation domain protein | HC | chr1:260010...   326   9e-90

>Medtr1g059760.1 | condensation domain protein | HC |
           chr1:26001006-26006585 | 20130731
          Length = 469

 Score =  326 bits (835), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 150/187 (80%), Positives = 170/187 (90%)

Query: 5   WTSKDLPEYQREKYAVVTLIDCRSILDPVLRSNQSGFYHSAILNTHDVCGEPLWDLAKRS 64
           W SK LP+YQ EKYAVVTLIDCR +LDPVL S+  GFYHSAILNTHDVCGE LW+LAKRS
Sbjct: 283 WVSKHLPDYQSEKYAVVTLIDCRPLLDPVLSSSHCGFYHSAILNTHDVCGETLWELAKRS 342

Query: 65  YTAYVDAMNSNKHFSDMNDLNFLMCKAIENPGLTPSSSLRTALISVFEDAVIDDSSKVHE 124
           YT++ +A++ NKHFSDM DLNFLMCKAI+NPGLTPSSSLRTAL+SVF+D VIDDS+++HE
Sbjct: 343 YTSFENALSYNKHFSDMADLNFLMCKAIDNPGLTPSSSLRTALVSVFDDLVIDDSNEMHE 402

Query: 125 ELGLEDYVGCASTHGVGPSVAIFDTVRNGKLDCACIYPSPLHSREQIQGLVDDMKRILVE 184
           ELGLEDY+GCAS HGVGPS+A+FD +RNGKLDCACIYPSPLHSREQIQ LVD MKRILV+
Sbjct: 403 ELGLEDYLGCASAHGVGPSLAMFDAIRNGKLDCACIYPSPLHSREQIQELVDHMKRILVD 462

Query: 185 GCNSENQ 191
            CNSENQ
Sbjct: 463 ACNSENQ 469