Miyakogusa Predicted Gene

Lj1g3v3658810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3658810.1 Non Characterized Hit- tr|I3T493|I3T493_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.54,0,SUBFAMILY
NOT NAMED,NULL; UNCHARACTERIZED,Methyltransferase-related; no
description,NULL; Methyltran,CUFF.31045.1
         (274 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g033530.1 | ribosomal RNA-processing-like protein | HC | c...   407   e-114
Medtr2g062880.1 | ribosomal RNA-processing-like protein | HC | c...   395   e-110
Medtr2g062880.2 | ribosomal RNA-processing-like protein | HC | c...   395   e-110
Medtr2g062880.3 | ribosomal RNA-processing-like protein | HC | c...   342   3e-94

>Medtr7g033530.1 | ribosomal RNA-processing-like protein | HC |
           chr7:12137758-12130937 | 20130731
          Length = 254

 Score =  407 bits (1045), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 191/223 (85%), Positives = 202/223 (90%)

Query: 52  FLEKMRARLSGGHFRMLNEKLYTCTGKEALDYFQEDPSLFNLYHAGYQTQMSNWPEQPVN 111
           FLEKMRARLSGGHFRM+NEKLYTCTGKEALDYF+ED SLFNLYHAGY+TQMSNWPEQPVN
Sbjct: 32  FLEKMRARLSGGHFRMINEKLYTCTGKEALDYFREDSSLFNLYHAGYKTQMSNWPEQPVN 91

Query: 112 VIIKWLRKQNPSFVVADFGCGEALIANSVKNTVFSLDLVSNDPKVIACDMANAPIVSSSV 171
           VIIKWL+KQ+PSFVVADFGCGEALIA SVKNTVFSLDLVSNDP VIACDMAN P+ S+S 
Sbjct: 92  VIIKWLKKQSPSFVVADFGCGEALIAKSVKNTVFSLDLVSNDPDVIACDMANTPLDSASA 151

Query: 172 DVAVFCLSLMGTNYQSYIQEAYRVLKPGGWLLIAEVKSRFDPNTGGADPEKFSKAILELG 231
           DVAVFCLSLMGTNYQ+Y++EA RVLKPGGWLLIAEVKSRFDPNTGGADPEKFS AI ELG
Sbjct: 152 DVAVFCLSLMGTNYQTYLEEACRVLKPGGWLLIAEVKSRFDPNTGGADPEKFSNAISELG 211

Query: 232 FNSVKQDFSNKMFILFYFTXXXXXXXXXXIGWPMLKPCLYKRR 274
           FNSVK+DFSNKMFILFYFT          I WP LKPCLYKRR
Sbjct: 212 FNSVKRDFSNKMFILFYFTKEKQNSKRKEIEWPSLKPCLYKRR 254


>Medtr2g062880.1 | ribosomal RNA-processing-like protein | HC |
           chr2:26600832-26594189 | 20130731
          Length = 253

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/224 (83%), Positives = 201/224 (89%), Gaps = 1/224 (0%)

Query: 52  FLEKMRARLSGGHFRMLNEKLYTCTGKEALDYFQEDPSLFNLYHAGYQTQMSNWPEQPVN 111
           FLEKMRARLSGGHFRM+NEKLYTCTGKEAL+YF+ED SLFNLYHAGY+TQMSNWPEQPVN
Sbjct: 30  FLEKMRARLSGGHFRMINEKLYTCTGKEALNYFREDSSLFNLYHAGYKTQMSNWPEQPVN 89

Query: 112 VIIKWLRKQNPSFVVADFGCGEALIANSVKNTVFSLDLVSNDPKVIACDMANAPIVSSSV 171
           VIIKWL+KQ+PSF+VADFGCGEA IA SVKNTVFSLDLVS+DP VIACDMAN P+ S+S 
Sbjct: 90  VIIKWLKKQSPSFIVADFGCGEARIAKSVKNTVFSLDLVSSDPDVIACDMANTPLGSASA 149

Query: 172 DVAVFCLSLMGTNYQSYIQEAYRVLKPGGWLLIAEVKSRFDPNTGGADPEKFSKAILELG 231
           DVAVFCLSLMGTNYQ+Y++EA RVLKPGGWLLIAEVKSRFDPNTGGADPEKFS AI ELG
Sbjct: 150 DVAVFCLSLMGTNYQTYLEEACRVLKPGGWLLIAEVKSRFDPNTGGADPEKFSNAISELG 209

Query: 232 FNSVKQDFSNKMFILFYFTXXXXX-XXXXXIGWPMLKPCLYKRR 274
           FNSVK+DFSNKMFILFYFT           I WP LKPCLYKRR
Sbjct: 210 FNSVKRDFSNKMFILFYFTKKEKQNSKRKEIEWPSLKPCLYKRR 253


>Medtr2g062880.2 | ribosomal RNA-processing-like protein | HC |
           chr2:26600740-26593763 | 20130731
          Length = 253

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/224 (83%), Positives = 201/224 (89%), Gaps = 1/224 (0%)

Query: 52  FLEKMRARLSGGHFRMLNEKLYTCTGKEALDYFQEDPSLFNLYHAGYQTQMSNWPEQPVN 111
           FLEKMRARLSGGHFRM+NEKLYTCTGKEAL+YF+ED SLFNLYHAGY+TQMSNWPEQPVN
Sbjct: 30  FLEKMRARLSGGHFRMINEKLYTCTGKEALNYFREDSSLFNLYHAGYKTQMSNWPEQPVN 89

Query: 112 VIIKWLRKQNPSFVVADFGCGEALIANSVKNTVFSLDLVSNDPKVIACDMANAPIVSSSV 171
           VIIKWL+KQ+PSF+VADFGCGEA IA SVKNTVFSLDLVS+DP VIACDMAN P+ S+S 
Sbjct: 90  VIIKWLKKQSPSFIVADFGCGEARIAKSVKNTVFSLDLVSSDPDVIACDMANTPLGSASA 149

Query: 172 DVAVFCLSLMGTNYQSYIQEAYRVLKPGGWLLIAEVKSRFDPNTGGADPEKFSKAILELG 231
           DVAVFCLSLMGTNYQ+Y++EA RVLKPGGWLLIAEVKSRFDPNTGGADPEKFS AI ELG
Sbjct: 150 DVAVFCLSLMGTNYQTYLEEACRVLKPGGWLLIAEVKSRFDPNTGGADPEKFSNAISELG 209

Query: 232 FNSVKQDFSNKMFILFYFTXXXXX-XXXXXIGWPMLKPCLYKRR 274
           FNSVK+DFSNKMFILFYFT           I WP LKPCLYKRR
Sbjct: 210 FNSVKRDFSNKMFILFYFTKKEKQNSKRKEIEWPSLKPCLYKRR 253


>Medtr2g062880.3 | ribosomal RNA-processing-like protein | HC |
           chr2:26598656-26593763 | 20130731
          Length = 212

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 163/199 (81%), Positives = 176/199 (88%), Gaps = 1/199 (0%)

Query: 77  GKEALDYFQEDPSLFNLYHAGYQTQMSNWPEQPVNVIIKWLRKQNPSFVVADFGCGEALI 136
           GKEAL+YF+ED SLFNLYHAGY+TQMSNWPEQPVNVIIKWL+KQ+PSF+VADFGCGEA I
Sbjct: 14  GKEALNYFREDSSLFNLYHAGYKTQMSNWPEQPVNVIIKWLKKQSPSFIVADFGCGEARI 73

Query: 137 ANSVKNTVFSLDLVSNDPKVIACDMANAPIVSSSVDVAVFCLSLMGTNYQSYIQEAYRVL 196
           A SVKNTVFSLDLVS+DP VIACDMAN P+ S+S DVAVFCLSLMGTNYQ+Y++EA RVL
Sbjct: 74  AKSVKNTVFSLDLVSSDPDVIACDMANTPLGSASADVAVFCLSLMGTNYQTYLEEACRVL 133

Query: 197 KPGGWLLIAEVKSRFDPNTGGADPEKFSKAILELGFNSVKQDFSNKMFILFYFTXXXXX- 255
           KPGGWLLIAEVKSRFDPNTGGADPEKFS AI ELGFNSVK+DFSNKMFILFYFT      
Sbjct: 134 KPGGWLLIAEVKSRFDPNTGGADPEKFSNAISELGFNSVKRDFSNKMFILFYFTKKEKQN 193

Query: 256 XXXXXIGWPMLKPCLYKRR 274
                I WP LKPCLYKRR
Sbjct: 194 SKRKEIEWPSLKPCLYKRR 212