Miyakogusa Predicted Gene

Lj1g3v3646510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3646510.1 tr|C6ZS19|C6ZS19_SOYBN Dhs1 OS=Glycine max
GN=Gma.58615 PE=2 SV=1,79.02,0,no description,Deoxyhypusine synthase;
DS,Deoxyhypusine synthase; DHS-like NAD/FAD-binding
domain,NU,CUFF.31062.1
         (602 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g079080.1 | deoxyhypusine synthase | LC | chr8:33747438-33...    62   1e-09

>Medtr8g079080.1 | deoxyhypusine synthase | LC |
           chr8:33747438-33746562 | 20130731
          Length = 106

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 6/46 (13%)

Query: 206 NNIPVFCPGLTDGSLGDMLYFHSFR------SPGLIVDIVQDIRAM 245
           NNIPV+CPGLTDGSLGDML FHSF       +PGL VDIVQ   ++
Sbjct: 45  NNIPVYCPGLTDGSLGDMLSFHSFHNTGGPDNPGLNVDIVQGFYSI 90