Miyakogusa Predicted Gene
- Lj1g3v3646460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3646460.1 Non Characterized Hit- tr|C6TM83|C6TM83_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57763 PE,89.3,0,WD40
repeat-like,WD40-repeat-containing domain; WD40,WD40 repeat; SUBFAMILY
NOT NAMED,NULL; WD40 REP,CUFF.31023.1
(332 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g007797.1 | transducin/WD-like repeat-protein | HC | chr6:... 603 e-173
Medtr8g068320.2 | transducin/WD-like repeat-protein | HC | chr8:... 329 2e-90
Medtr8g068320.1 | transducin/WD-like repeat-protein | HC | chr8:... 328 4e-90
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 80 2e-15
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 78 1e-14
Medtr8g092890.1 | transducin/WD-like repeat-protein | HC | chr8:... 56 5e-08
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 55 8e-08
Medtr1g089260.1 | U3 small nucleolar RNA-associated protein, put... 54 2e-07
Medtr4g104380.1 | nucleotide-binding protein | HC | chr4:4318905... 54 3e-07
Medtr8g038550.1 | flowering time control FY-like protein | HC | ... 53 4e-07
Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protei... 53 4e-07
Medtr3g106080.1 | TBP-associated factor 5 | HC | chr3:48932864-4... 53 5e-07
Medtr8g092620.1 | MAP kinase organizer 1 | HC | chr8:38745356-38... 52 7e-07
Medtr4g125710.1 | transducin/WD-like repeat-protein | HC | chr4:... 52 1e-06
Medtr1g090827.1 | coatomer subunit alpha-like protein | HC | chr... 50 4e-06
Medtr3g052220.1 | transducin/WD-like repeat-protein | HC | chr3:... 49 6e-06
Medtr3g061450.1 | transducin/WD-like repeat-protein | HC | chr3:... 49 7e-06
Medtr8g092620.2 | MAP kinase organizer 1 | HC | chr8:38744844-38... 49 7e-06
>Medtr6g007797.1 | transducin/WD-like repeat-protein | HC |
chr6:2008997-2006343 | 20130731
Length = 340
Score = 603 bits (1554), Expect = e-173, Method: Compositional matrix adjust.
Identities = 282/317 (88%), Positives = 303/317 (95%)
Query: 3 TPALTELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLL 62
T +LTELDDD+VR+MSIGAVFSD+ G+I SIDFHRKDDLLVT EDDSVRLYDI NAKLL
Sbjct: 2 TASLTELDDDIVRTMSIGAVFSDYVGKIYSIDFHRKDDLLVTAGEDDSVRLYDIVNAKLL 61
Query: 63 KTTYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVS 122
KTTYHKKHG D+ICFTHHPSS+ICSSRYNLEST ESLRYLS+YDNRCLRYFKGHKQRVVS
Sbjct: 62 KTTYHKKHGTDQICFTHHPSSVICSSRYNLESTGESLRYLSMYDNRCLRYFKGHKQRVVS 121
Query: 123 LCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIK 182
LCMSPINDSFMSGS+DHSVR+WDLRVNACQGILH+RGRP VAYDQQGLVFAVAMEGGAIK
Sbjct: 122 LCMSPINDSFMSGSVDHSVRLWDLRVNACQGILHVRGRPTVAYDQQGLVFAVAMEGGAIK 181
Query: 183 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFN 242
LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL+TTNN+ YVLDAYGG+KRCGF+
Sbjct: 182 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLSTTNNNIYVLDAYGGDKRCGFS 241
Query: 243 LEPSPGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRA 302
LEPS GT+IEATFTPDGKY+VAGSGGGTMHAW+I+ +EVACWSSHIGVP CLKWAPRRA
Sbjct: 242 LEPSHGTSIEATFTPDGKYVVAGSGGGTMHAWSIDRNHEVACWSSHIGVPSCLKWAPRRA 301
Query: 303 MFAAASSVLTFWIPNNE 319
MFAAAS+VLTFWIPNNE
Sbjct: 302 MFAAASTVLTFWIPNNE 318
>Medtr8g068320.2 | transducin/WD-like repeat-protein | HC |
chr8:28484550-28490474 | 20130731
Length = 333
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/327 (48%), Positives = 229/327 (70%), Gaps = 15/327 (4%)
Query: 1 MATPALTE------LDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLY 54
M TP E L ++++ SM +G F D+ GRI+S+DFHR LVT ++D+S+RLY
Sbjct: 1 MGTPGEKEEKVSLDLSEEILLSMEVGMSFKDYNGRISSMDFHRASSYLVTASDDESIRLY 60
Query: 55 DIANAKLLKTTYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFK 114
D+A LKT KK+G D +CFT HP+++I SS+ + ESLR LS++DN+ LRYFK
Sbjct: 61 DVAAGTSLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD---ESLRLLSLHDNKYLRYFK 117
Query: 115 GHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAV 174
GH RVVSL + P D F+SGSLD +V +WD R CQG+LH++GRPA++YD QGLVFA+
Sbjct: 118 GHHDRVVSLSLCPRKDCFISGSLDRTVLLWDQRAEKCQGLLHVQGRPAISYDDQGLVFAI 177
Query: 175 AMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYG 234
A GG I++FD+R Y+KGPF+ F VGGD ++ +KFSNDG+ +L+TTT+ H +VLD++
Sbjct: 178 AF-GGYIRMFDARMYEKGPFELFSVGGDVSDANVVKFSNDGRLLLVTTTDGHIHVLDSFR 236
Query: 235 GEKRCGFNLEP-SPGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACW---SSHIG 290
G +N+ P S +T+EA+F+PDG ++++ SG G+++AW++ + EVA W +S IG
Sbjct: 237 GTLLFAYNVTPVSCNSTLEASFSPDGMFVISSSGDGSIYAWSVRSGKEVASWRSATSDIG 296
Query: 291 VPWCLKWAPRRAMFAAASSVLTFWIPN 317
P +KWAP MFA SS L+FW+P+
Sbjct: 297 PP-VVKWAPGSLMFATGSSELSFWVPD 322
>Medtr8g068320.1 | transducin/WD-like repeat-protein | HC |
chr8:28484599-28490219 | 20130731
Length = 334
Score = 328 bits (842), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 156/314 (49%), Positives = 226/314 (71%), Gaps = 9/314 (2%)
Query: 8 ELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYH 67
+L ++++ SM +G F D+ GRI+S+DFHR LVT ++D+S+RLYD+A LKT
Sbjct: 15 DLSEEILLSMEVGMSFKDYNGRISSMDFHRASSYLVTASDDESIRLYDVAAGTSLKTINS 74
Query: 68 KKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSP 127
KK+G D +CFT HP+++I SS+ + ESLR LS++DN+ LRYFKGH RVVSL + P
Sbjct: 75 KKYGVDLVCFTSHPTTVIYSSKNGWD---ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCP 131
Query: 128 INDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSR 187
D F+SGSLD +V +WD R CQG+LH++GRPA++YD QGLVFA+A GG I++FD+R
Sbjct: 132 RKDCFISGSLDRTVLLWDQRAEKCQGLLHVQGRPAISYDDQGLVFAIAF-GGYIRMFDAR 190
Query: 188 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEP-S 246
Y+KGPF+ F VGGD ++ +KFSNDG+ +L+TTT+ H +VLD++ G +N+ P S
Sbjct: 191 MYEKGPFELFSVGGDVSDANVVKFSNDGRLLLVTTTDGHIHVLDSFRGTLLFAYNVTPVS 250
Query: 247 PGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACW---SSHIGVPWCLKWAPRRAM 303
+T+EA+F+PDG ++++ SG G+++AW++ + EVA W +S IG P +KWAP M
Sbjct: 251 CNSTLEASFSPDGMFVISSSGDGSIYAWSVRSGKEVASWRSATSDIGPP-VVKWAPGSLM 309
Query: 304 FAAASSVLTFWIPN 317
FA SS L+FW+P+
Sbjct: 310 FATGSSELSFWVPD 323
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 126/281 (44%), Gaps = 12/281 (4%)
Query: 30 INSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSSR 89
++ + F +LL + + D ++ +Y LL G + I ++ S ICS+
Sbjct: 30 VSCVKFSNDGNLLASASLDKTLIIYSSTTLSLLHRLTGHSEGINDIAWSS-DSHYICSA- 87
Query: 90 YNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVN 149
S ++LR C++ +GH V + +P ++ +SGS D +VR+W+++
Sbjct: 88 ----SDDKTLRIWDANTGDCVKTLRGHGHNVFCVNFNPQSNYIVSGSFDETVRVWEVKTG 143
Query: 150 ACQGILHLRGRP--AVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVC 207
++ P +V +++ G + G+ K++D+ S G L+ V
Sbjct: 144 KSVHVIKAHAMPVTSVDFNRDGSLIVSGSHDGSCKIWDTNS---GALLKTLIDDKVPAVS 200
Query: 208 DIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEPSPGTTIEATFT-PDGKYLVAGS 266
KFS +GK +L+ T N+ + + G ++ + + +TF+ +G+Y+V+GS
Sbjct: 201 FAKFSPNGKFILVATLNDTLKLWNYAAGRSLKMYSGHVNRVYCLTSTFSVTNGRYIVSGS 260
Query: 267 GGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAAA 307
++ W+++ KN + H + P+ A+A
Sbjct: 261 EDRCLYLWDLQQKNMIQKLEGHTDTVISVTCHPKENKIASA 301
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 137/320 (42%), Gaps = 21/320 (6%)
Query: 1 MATPALTELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANA- 59
MAT + D + ++ + I+++ F LL +++ D ++R Y N+
Sbjct: 1 MATEEPMDCDSSNYKPYTLSQTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTNSD 60
Query: 60 --------KLLKTTYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLR 111
++ +HG + F+ L+ +S +++R + ++
Sbjct: 61 SDSNSLTLSPMQQYEGHQHGVSDLAFSSDSRYLVSASD------DKTIRLWDVPTGSLVK 114
Query: 112 YFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRP--AVAYDQQG 169
GH V + +P ++ +SGS D +VR+WD++ C +L P AV +++ G
Sbjct: 115 TLHGHTNYVFCVNFNPQSNVIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDG 174
Query: 170 LVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYV 229
+ + G +++D+ + G L+ + V +KFS + K +L+ T +N+ +
Sbjct: 175 TLIVSSSYDGLCRIWDAST---GHCIKTLIDDENPPVSYVKFSPNAKFILVGTLDNNLRL 231
Query: 230 LDAYGGEKRCGFNLEPSPGTTIEATFT-PDGKYLVAGSGGGTMHAWNIETKNEVACWSSH 288
+ G+ + + I ++F+ +GKY+V GS ++ W ++++ V H
Sbjct: 232 WNYSTGKFLKTYTGHVNSKYCISSSFSITNGKYVVGGSEDNCIYLWGLQSRKIVQKLEGH 291
Query: 289 IGVPWCLKWAPRRAMFAAAS 308
+ P M A+ +
Sbjct: 292 TDSVVSVSCHPTENMIASGA 311
>Medtr8g092890.1 | transducin/WD-like repeat-protein | HC |
chr8:38951241-38954817 | 20130731
Length = 645
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 70 HGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPIN 129
H +D + S ++ SS S +++R I ++CL F HK V + +P+N
Sbjct: 290 HSSDILDLAWSNSDILLSS-----SMDKTVRAWKISCDQCLSVFP-HKGFVTCIQFNPVN 343
Query: 130 DS-FMSGSLDHSVRIWDLRVNACQGILHLRGR-PAVAYDQQGLVFAVAMEGGAIKLF-DS 186
++ F+SGS+D VRIW +R +R A++Y Q G F V G + + S
Sbjct: 344 ENYFISGSIDGKVRIWGIREERVIDWADIRDVISAISYQQDGKGFVVGSLTGTCRFYVAS 403
Query: 187 RSYDKGPFDTFLVGGDTAEVCDIK----FSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFN 242
Y + + G A I F N+ + +++T+ ++ +LD E +
Sbjct: 404 GKYFQLEGQIDIPGKKKASGNKITGIQFFQNNCQRIMITSEDSKICILDQT--EIVQKYK 461
Query: 243 LEPSPGTTIEATFTPDGKYLVAGSGGGTMHAWNI 276
P G+ + +FT GK++++ ++ WN
Sbjct: 462 GLPWSGSQMSGSFTSSGKHIISVGEDSHVYIWNF 495
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 13/161 (8%)
Query: 30 INSIDFHRKDD-LLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSS 88
+N + RK +LVT ED V L+ I + + G D + F SS
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSGIDSVNFD--------SS 70
Query: 89 RYNLESTAES--LRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDL 146
+ + A S ++ + + + +R GH+ S+ P + F SGSLD +++IWD+
Sbjct: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 147 RVNACQGIL--HLRGRPAVAYDQQGLVFAVAMEGGAIKLFD 185
R C H RG A+ + G E +KL+D
Sbjct: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 85/219 (38%), Gaps = 43/219 (19%)
Query: 132 FMSGSLDHSVRIWDL-RVNACQGIL-HLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSR-- 187
++G DH V +W + + NA + H G +V +D ++ A G IKL+D
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHSSGIDSVNFDSSEVLVAAGAASGTIKLWDLEEA 91
Query: 188 --------------SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAY 233
S D PF F G ++K + K + T HT ++A
Sbjct: 92 KIVRTLTGHRSNCTSVDFHPFGEFFASGSLD--TNLKIWDIRKKGCIHTYKGHTRGVNAI 149
Query: 234 GGEKRCGFNLEPSPGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPW 293
FTPDG+++V+G T+ W++ + + SH G
Sbjct: 150 --------------------RFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQIQ 189
Query: 294 CLKWAPRRAMFAAASS--VLTFW-IPNNEYGATATPITS 329
C+ + P + A S+ + FW + E +A P T+
Sbjct: 190 CIDFHPSEFLLATGSADRTVKFWDLETFELIGSAGPETT 228
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 30 INSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSSR 89
I+S++F + L+ A +++L+D+ AK+++T + + F HP +S
Sbjct: 62 IDSVNFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDF--HPFGEFFAS- 118
Query: 90 YNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVN 149
S +L+ I C+ +KGH + V ++ +P +SG D++V++WDL
Sbjct: 119 ---GSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG 175
Query: 150 ACQGILH----LRGR-PAVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGG--- 201
+LH G+ + + + A +K +D +++ L+G
Sbjct: 176 K---LLHDFKSHEGQIQCIDFHPSEFLLATGSADRTVKFWDLETFE-------LIGSAGP 225
Query: 202 DTAEVCDIKFSNDGKSML 219
+T V + FS DG+++L
Sbjct: 226 ETTGVRSLTFSPDGRTLL 243
>Medtr1g089260.1 | U3 small nucleolar RNA-associated protein,
putative | HC | chr1:40006446-40004460 | 20130731
Length = 530
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 30/291 (10%)
Query: 15 RSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADR 74
+++S A S F ++S+ F L+ + ++++D+ +T + +R
Sbjct: 73 QTLSQTATISSFSDTVSSVSFRNDARLVAASDLSGFIQIFDVKT----RTRLRRLSSNNR 128
Query: 75 -ICFTHHPSSLICSSRYNLESTAES--LRYLSIYDNRCLRYFKGHKQRVVSLCMSPIN-D 130
+ F H+P + +L S ++ +RY + + F+GHK V SP++ D
Sbjct: 129 PVRFVHYPRH----DKLHLVSGSDDAVVRYWDVAEETPFMVFRGHKDYVRCGDSSPVSSD 184
Query: 131 SFMSGSLDHSVRIWDLRV----NACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLFDS 186
SF++GS DH V++WD+RV N+ H V Y G + A A G A+K++D
Sbjct: 185 SFVTGSYDHFVKVWDVRVRGETNSVMDFNHGCPVEDVVYLPGGGMIATA-GGNAVKIWDL 243
Query: 187 RSYDKGPFDTFLVGGDTAEVC------DIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCG 240
+ + ++C D +D ++ + + V D YG K
Sbjct: 244 IGGGRLVYSMESHNKTVTKICVGRIGKDSGDESDQYRIMSVGLDGYFKVFD-YGNMKVTY 302
Query: 241 FNLEPSPGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGV 291
P+P + ++PD V G+ G ++A K +V +GV
Sbjct: 303 SMRYPAP--LLSVGYSPDCSTRVIGTSNGIIYA----AKRKVKVDEKEVGV 347
>Medtr4g104380.1 | nucleotide-binding protein | HC |
chr4:43189052-43185561 | 20130731
Length = 514
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 115/291 (39%), Gaps = 20/291 (6%)
Query: 32 SIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSSRYN 91
S+ F L+T +D SV+++D L + + T+ S+I +S N
Sbjct: 235 SLLFEYNSSRLITGGQDRSVKVWDTNTGSLSSSLTGCLGSVLDLTITNDNRSVIAASSSN 294
Query: 92 LESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFM-SGSLDHSVRIWDLRVNA 150
+L + R GH +V ++ +S ++ + S + D ++++WDL
Sbjct: 295 ------NLYVWDLSSGRVRHTLTGHTDKVCAVDVSKVSSRLVVSAAYDRTIKVWDLMKGY 348
Query: 151 CQG-ILHLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDI 209
C I+ A+ + G G ++L+D +S G + V + V I
Sbjct: 349 CTNTIMFPSNCNALCFSTDGQTIFSGHVDGNLRLWDIQS---GRLLSE-VAAHSHAVTSI 404
Query: 210 KFSNDGKSMLLTTTNNHTYVLDAYG----GEKRCGFNLEPSPGTTIEATFTPDGKYLVAG 265
S +G L + +N + D G R N S + + +PD ++ AG
Sbjct: 405 SLSRNGNIALTSGRDNLHNLFDVRSLEVCGTLRATVNRVASNWS--RSCISPDNNHVAAG 462
Query: 266 SGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAAA--SSVLTFW 314
S G++H W+I ++ H C W+ A+A + +++ W
Sbjct: 463 SADGSVHIWSISKGEIISTLKEHTSSVLCCSWSGMGKPLASADRNGIVSIW 513
>Medtr8g038550.1 | flowering time control FY-like protein | HC |
chr8:14279771-14293184 | 20130731
Length = 745
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Query: 27 GGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLIC 86
G + S+D+H LLV+ +D+ V+L+D + K L + F H ++++C
Sbjct: 309 GWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKSGKELSS------------FHGHKNTVLC 356
Query: 87 ---SSRYNLESTAESLRYLSIYDNRCLRY---FKGHKQRVVSLCMSPINDS-FMSGSLDH 139
+ N TA + + +YD R ++ F+GH++ V +L P ++ F+SGS D
Sbjct: 357 VKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTTLAWHPFHEEYFVSGSYDG 416
Query: 140 SVRIW 144
S+ W
Sbjct: 417 SIFHW 421
>Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190921-3179833 | 20130731
Length = 1030
Score = 52.8 bits (125), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 29/223 (13%)
Query: 10 DDDLVRSMSIG--AVFSDFGGR---INSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKT 64
DD V +IG S G + S+ F + L++ + +RL+D+ +K+++T
Sbjct: 36 DDHKVNLWTIGKPTSLSSLSGHTSPVESVTFDSGEVLVLAGSTSGVIRLWDLEESKMVRT 95
Query: 65 TYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNR---CLRYFKGHKQRVV 121
+ + F HP +S ++++ L I+DNR C+ +KGH Q +
Sbjct: 96 VAGHRSNCTSVEF--HPFGEFFASG-SMDTN------LKIWDNRKKGCIHTYKGHSQGIS 146
Query: 122 SLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGG-- 179
++ +P +SG D+ V++WDL + + D L F +A
Sbjct: 147 TIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFNFHDGHITSLDFHPLEFLLATGSADR 206
Query: 180 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSML 219
+K +D S++ L+G E ++ F DG+++
Sbjct: 207 TVKFWDLESFE-------LIGSARREATGVRSMAFHPDGRTLF 242
>Medtr3g106080.1 | TBP-associated factor 5 | HC |
chr3:48932864-48942802 | 20130731
Length = 669
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Query: 108 RCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQ 167
R F+GH V + P+ D +S S D ++R+W ++NA ++ +G +D
Sbjct: 410 RQYTLFQGHSGPVYAASFCPVGDFILSSSADSTIRLWSTKLNA--NLVCYKGHNYPVWDV 467
Query: 168 Q----GLVFAVAMEGGAIKLFDSRSYDK-GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT 222
Q G FA + +++ S D+ P ++ G ++V +++ + + +
Sbjct: 468 QFSPMGHYFASSSHDRTARVW---SMDRIQPLR--IMAGHLSDVDCVQWHANCNYIATGS 522
Query: 223 TNNHTYVLDAYGGEKRCGFNLEPSPGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEV 282
++ + D GE C G + + +PDG+Y+ +G GT+ W++ + V
Sbjct: 523 SDKTVRLWDVQSGE--CVRVFVGHRGMILSLSMSPDGRYMASGDEDGTIMMWDLSSGRCV 580
Query: 283 ACWSSHIGVPWCLKWAPRRAMFAAASS--VLTFWIPNNEYGATAT 325
H W L ++ ++ A+ S+ + W N + T
Sbjct: 581 TPLVGHTSCVWSLAFSSEGSILASGSADCTVKLWDVNTSTKVSRT 625
>Medtr8g092620.1 | MAP kinase organizer 1 | HC |
chr8:38745356-38740545 | 20130731
Length = 330
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 28/309 (9%)
Query: 22 VFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGAD-RICFTHH 80
V G + + F+ + +++ +D ++RL++ +KT +K HG + R
Sbjct: 20 VLKGHEGGVLAARFNSDGNYILSCGKDRTIRLWNPHRGIHIKT--YKSHGREVRDVHVTT 77
Query: 81 PSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHS 140
+S +CS + Y + R +R F+GH V + + + +S D S
Sbjct: 78 DNSKLCSC-----GGDRQVYYWDVATGRVIRKFRGHDGEVNGVKFNEYSSVVVSAGYDQS 132
Query: 141 VRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEG---GAIKLFDSRSYDKGPFDTF 197
+R WD R ++ + I + A + L + G G ++ FD R
Sbjct: 133 LRAWDCRSHSTEPI-QIIDTFADSVMSVCLTKTEIIGGSVDGTVRTFDMR---------- 181
Query: 198 LVGGDTAE-----VCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEPSPGTTIE 252
+G + ++ V I SNDG +L ++ +LD GE + + ++
Sbjct: 182 -IGREISDSLGQPVNCISMSNDGNCILAGCLDSTVRLLDRTTGELLQEYKGHTNKSYKLD 240
Query: 253 ATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAAASSVLT 312
T ++ GS G ++ W++ + V+ + +H V + + P+ +S T
Sbjct: 241 CCLTNTDAHVTGGSEDGFVYFWDLVDASVVSKFRAHTSVVTSVSYHPKENCMITSSVDGT 300
Query: 313 FWIPNNEYG 321
N+YG
Sbjct: 301 IRGNTNQYG 309
>Medtr4g125710.1 | transducin/WD-like repeat-protein | HC |
chr4:52171409-52168341 | 20130731
Length = 321
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 97 ESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILH 156
E++R D R GH V S+ P+ S SLD VR++D+ NA I
Sbjct: 40 ETVRLWKSDDLVLERTNTGHCLGVASVAAHPLGSIAASSSLDSFVRVFDVDSNAT--IAT 97
Query: 157 LRGRPA----VAYDQQGLVFAVAMEGGA-IKLFDSRSYD----------KGPFDTFLVGG 201
L P+ + +D +G + AVA G A + L+D+ +++ +GP + G
Sbjct: 98 LEAPPSEVWQMRFDPKGAILAVAGGGSASVNLWDTSTWELVVTLSIPRVEGPKPSDK-SG 156
Query: 202 DTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGF--NLEPSPGTTIEATFTP-D 258
V + +S DGK + + + V D +R F +LE ++P D
Sbjct: 157 SKKFVLSVAWSPDGKRLACGSMDGTISVFDV----QRAKFLHHLEGHFMPVRSLVYSPYD 212
Query: 259 GKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAAASS 309
+ L + S G +H ++ E K V S H C+ +P A A SS
Sbjct: 213 PRLLFSASDDGNVHMYDAEGKALVGTMSGHASWVLCVDVSPDGAAIATGSS 263
>Medtr1g090827.1 | coatomer subunit alpha-like protein | HC |
chr1:40855860-40850967 | 20130731
Length = 1216
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 23 FSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGAD--RICFTHH 80
F + G + + FH L V+ +D ++++ N KL + + D R HH
Sbjct: 47 FDEHDGPVRGVHFHNSQPLFVSGGDDYKIKVW---NYKLHRCLFTLLGHLDYIRTVQFHH 103
Query: 81 PSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHS 140
S I S+ S +++R + C+ GH V+ P +D +S SLD +
Sbjct: 104 ESPWIVSA-----SDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPKDDLVVSASLDQT 158
Query: 141 VRIWDL 146
VR+WD+
Sbjct: 159 VRVWDI 164
>Medtr3g052220.1 | transducin/WD-like repeat-protein | HC |
chr3:20670443-20658166 | 20130731
Length = 513
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 33 IDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYH-KKHGADRICFTHHPSSLICSSRYN 91
+DF R +++ + + D ++++ I A+ L+ H G + F+ S L+ +S
Sbjct: 270 VDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTS--- 326
Query: 92 LESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVNAC 151
+STA R + + L+ F+GH V + ++ S D +V++WDL+ C
Sbjct: 327 FDSTA---RIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDC 383
Query: 152 QGILH----LRGRPA---------------VAYDQQGLVFAVAMEGGAIKLFDSRSYDKG 192
LRG A V ++ ++ + ++G +K F S + G
Sbjct: 384 LQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG 443
Query: 193 PF 194
F
Sbjct: 444 DF 445
>Medtr3g061450.1 | transducin/WD-like repeat-protein | HC |
chr3:24506567-24498548 | 20130731
Length = 313
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 84/220 (38%), Gaps = 15/220 (6%)
Query: 113 FKGHKQRVVSLCMSPIN-DSFMSGSLDHSVRIWDLRVNACQGILHLRGRPA-VAYDQQGL 170
KGH V LC P + D + S D +VR+WD R C L G + Y G
Sbjct: 61 LKGHTDSVDQLCWDPKHPDLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT 120
Query: 171 VFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVL 230
AV + + D R + F EV +I ++ G+ LTT N VL
Sbjct: 121 HVAVGNRDDELTILDVRKFKPMHRRKF-----NYEVNEIAWNMTGEMFFLTTGNGTVEVL 175
Query: 231 DAYGGEKRCGFNLEPSPGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIG 290
+Y + + + G A P G++ GS + W I +E+ C +
Sbjct: 176 -SYPSLRPLDTLMAHTAGCYCIA-IDPTGRHFAVGSADSLVSLWVI---SEMLCVRTFTK 230
Query: 291 VPWCLK---WAPRRAMFAAASSVLTFWIPNNEYGATATPI 327
+ W ++ + + A+AS L I N G T I
Sbjct: 231 LEWPVRTISFNHTGDLIASASEDLFIDISNVHTGKTVHHI 270
>Medtr8g092620.2 | MAP kinase organizer 1 | HC |
chr8:38744844-38740226 | 20130731
Length = 299
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 121/296 (40%), Gaps = 28/296 (9%)
Query: 22 VFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGAD-RICFTHH 80
V G + + F+ + +++ +D ++RL++ +KT +K HG + R
Sbjct: 13 VLKGHEGGVLAARFNSDGNYILSCGKDRTIRLWNPHRGIHIKT--YKSHGREVRDVHVTT 70
Query: 81 PSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHS 140
+S +CS + + + Y + R +R F+GH V + + + +S D S
Sbjct: 71 DNSKLCSCGGDRQ-----VYYWDVATGRVIRKFRGHDGEVNGVKFNEYSSVVVSAGYDQS 125
Query: 141 VRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEG---GAIKLFDSRSYDKGPFDTF 197
+R WD R ++ + I + A + L + G G ++ FD R
Sbjct: 126 LRAWDCRSHSTEPI-QIIDTFADSVMSVCLTKTEIIGGSVDGTVRTFDMR---------- 174
Query: 198 LVGGDTAE-----VCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEPSPGTTIE 252
+G + ++ V I SNDG +L ++ +LD GE + + ++
Sbjct: 175 -IGREISDSLGQPVNCISMSNDGNCILAGCLDSTVRLLDRTTGELLQEYKGHTNKSYKLD 233
Query: 253 ATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAAAS 308
T ++ GS G ++ W++ + V+ + +H V + + P+ +S
Sbjct: 234 CCLTNTDAHVTGGSEDGFVYFWDLVDASVVSKFRAHTSVVTSVSYHPKENCMITSS 289