Miyakogusa Predicted Gene

Lj1g3v3646360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3646360.1 Non Characterized Hit- tr|B9F138|B9F138_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,83.87,0.00000008,P-loop containing nucleoside triphosphate
hydrolases,NULL; PROBABLE ATP-DEPENDENT DNA HELICASE
HFM1,,CUFF.31016.1
         (193 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helic...   337   5e-93
Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helic...   336   6e-93
Medtr7g075463.2 | ATP-binding; ATP-dependent helicase; DNA helic...   336   8e-93
Medtr7g075463.4 | ATP-binding; ATP-dependent helicase; DNA helic...   336   8e-93
Medtr3g025300.1 | U5 small nuclear ribonucleoprotein helicase | ...    95   4e-20
Medtr3g025300.2 | U5 small nuclear ribonucleoprotein helicase | ...    95   4e-20
Medtr4g011450.1 | U5 small nuclear ribonucleoprotein 200 kDa hel...    89   3e-18
Medtr4g011450.2 | U5 small nuclear ribonucleoprotein 200 kDa hel...    89   3e-18
Medtr2g064740.1 | U5 small nuclear ribonucleoprotein 200 kDa hel...    84   7e-17
Medtr0312s0040.1 | DNA polymerase theta-like protein | HC | scaf...    76   1e-14
Medtr1g008600.1 | ATP-binding; ATP-dependent helicase; DNA helic...    76   2e-14
Medtr1g007510.1 | DNA polymerase theta-like protein | HC | chr1:...    70   2e-12
Medtr3g462290.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein...    54   6e-08
Medtr5g069360.1 | DEAD/DEAH-box RNA helicase | HC | chr5:2940354...    50   2e-06
Medtr4g008780.1 | U5 small nuclear ribonucleoprotein 200 kDa hel...    49   3e-06
Medtr2g064390.1 | U5 small nuclear ribonucleoprotein helicase | ...    47   9e-06

>Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helicase
           | HC | chr7:28265418-28275446 | 20130731
          Length = 1252

 Score =  337 bits (864), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 159/173 (91%), Positives = 167/173 (96%)

Query: 1   MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRL 60
           MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQ+S+GKSALIFCSTRKGAQEAAQRL
Sbjct: 235 MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQRL 294

Query: 61  SQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEG 120
           +QIVM FGQSNPFI + EQ D+LREAS+SLSDKQMQSYILYGVGYHNGGLC KDR+IVEG
Sbjct: 295 AQIVMNFGQSNPFIKSREQQDQLREASMSLSDKQMQSYILYGVGYHNGGLCHKDRSIVEG 354

Query: 121 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQV 173
           LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEK LYMEYDRSTILQ+
Sbjct: 355 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQM 407


>Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helicase
           | HC | chr7:28265418-28275446 | 20130731
          Length = 1050

 Score =  336 bits (862), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 159/173 (91%), Positives = 167/173 (96%)

Query: 1   MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRL 60
           MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQ+S+GKSALIFCSTRKGAQEAAQRL
Sbjct: 235 MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQRL 294

Query: 61  SQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEG 120
           +QIVM FGQSNPFI + EQ D+LREAS+SLSDKQMQSYILYGVGYHNGGLC KDR+IVEG
Sbjct: 295 AQIVMNFGQSNPFIKSREQQDQLREASMSLSDKQMQSYILYGVGYHNGGLCHKDRSIVEG 354

Query: 121 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQV 173
           LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEK LYMEYDRSTILQ+
Sbjct: 355 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQM 407


>Medtr7g075463.2 | ATP-binding; ATP-dependent helicase; DNA helicase
           | HC | chr7:28265418-28275446 | 20130731
          Length = 940

 Score =  336 bits (862), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 159/173 (91%), Positives = 167/173 (96%)

Query: 1   MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRL 60
           MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQ+S+GKSALIFCSTRKGAQEAAQRL
Sbjct: 235 MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQRL 294

Query: 61  SQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEG 120
           +QIVM FGQSNPFI + EQ D+LREAS+SLSDKQMQSYILYGVGYHNGGLC KDR+IVEG
Sbjct: 295 AQIVMNFGQSNPFIKSREQQDQLREASMSLSDKQMQSYILYGVGYHNGGLCHKDRSIVEG 354

Query: 121 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQV 173
           LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEK LYMEYDRSTILQ+
Sbjct: 355 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQM 407


>Medtr7g075463.4 | ATP-binding; ATP-dependent helicase; DNA helicase
           | HC | chr7:28265418-28275446 | 20130731
          Length = 940

 Score =  336 bits (862), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 159/173 (91%), Positives = 167/173 (96%)

Query: 1   MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRL 60
           MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQ+S+GKSALIFCSTRKGAQEAAQRL
Sbjct: 235 MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQRL 294

Query: 61  SQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEG 120
           +QIVM FGQSNPFI + EQ D+LREAS+SLSDKQMQSYILYGVGYHNGGLC KDR+IVEG
Sbjct: 295 AQIVMNFGQSNPFIKSREQQDQLREASMSLSDKQMQSYILYGVGYHNGGLCHKDRSIVEG 354

Query: 121 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQV 173
           LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEK LYMEYDRSTILQ+
Sbjct: 355 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQM 407


>Medtr3g025300.1 | U5 small nuclear ribonucleoprotein helicase | HC |
            chr3:7719529-7688875 | 20130731
          Length = 2081

 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 5/175 (2%)

Query: 1    MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRL 60
            +RPV L   + GY P K        +    +  +   S  K  LIF S+R+  +  A  L
Sbjct: 1476 VRPVPLEVHIQGY-PGKYYCPRMNSMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDL 1534

Query: 61   SQIVMTFGQSNPFITNSEQIDRLREASLS-LSDKQMQSYILYGVGYHNGGLCLKDRNIVE 119
             Q   +   S  F+   E+     E  LS +SD+ ++  + +G+G H+ GL  KDR++VE
Sbjct: 1535 IQFAASDEHSRQFLNMPEEA---LEMFLSQVSDQNLRHTLQFGIGLHHAGLNDKDRSLVE 1591

Query: 120  GLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
             LF    IQVL  T+TLA G+NLPAH V+IK T++++ +   Y+++  + ILQ+ 
Sbjct: 1592 ELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMM 1646



 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 5/176 (2%)

Query: 2   RPVKLTTKVFGYAPAKNDFLFEKRLQNYIF--DILMQFSRGKSALIFCSTRKGAQEAAQR 59
           RPV L  +  G +  + +F     L N I    +     +G  A++F  +RK   + AQ+
Sbjct: 637 RPVPLAQQYIGIS--EPNFAARNELLNVICYRKVADSIRQGHQAMVFVHSRKDTAKTAQK 694

Query: 60  LSQIVMTFGQSNPFITNSE-QIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIV 118
           L+++         F  ++      +++  +   +K +      G+G H+ G+   DR + 
Sbjct: 695 LTELARANDDLELFNNDTHPHYFFMKKEVVKSRNKDLVQLFELGMGIHHAGMLRSDRGLT 754

Query: 119 EGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
           E LF +G ++VL  T TLA G+NLPAHTVVIK TQ ++ + G + +     ++Q+F
Sbjct: 755 ERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIF 810


>Medtr3g025300.2 | U5 small nuclear ribonucleoprotein helicase | HC |
            chr3:7719529-7695186 | 20130731
          Length = 1734

 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 5/175 (2%)

Query: 1    MRPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRL 60
            +RPV L   + GY P K        +    +  +   S  K  LIF S+R+  +  A  L
Sbjct: 1476 VRPVPLEVHIQGY-PGKYYCPRMNSMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDL 1534

Query: 61   SQIVMTFGQSNPFITNSEQIDRLREASLS-LSDKQMQSYILYGVGYHNGGLCLKDRNIVE 119
             Q   +   S  F+   E+     E  LS +SD+ ++  + +G+G H+ GL  KDR++VE
Sbjct: 1535 IQFAASDEHSRQFLNMPEEA---LEMFLSQVSDQNLRHTLQFGIGLHHAGLNDKDRSLVE 1591

Query: 120  GLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
             LF    IQVL  T+TLA G+NLPAH V+IK T++++ +   Y+++  + ILQ+ 
Sbjct: 1592 ELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMM 1646



 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 5/176 (2%)

Query: 2   RPVKLTTKVFGYAPAKNDFLFEKRLQNYIF--DILMQFSRGKSALIFCSTRKGAQEAAQR 59
           RPV L  +  G +  + +F     L N I    +     +G  A++F  +RK   + AQ+
Sbjct: 637 RPVPLAQQYIGIS--EPNFAARNELLNVICYRKVADSIRQGHQAMVFVHSRKDTAKTAQK 694

Query: 60  LSQIVMTFGQSNPFITNSE-QIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIV 118
           L+++         F  ++      +++  +   +K +      G+G H+ G+   DR + 
Sbjct: 695 LTELARANDDLELFNNDTHPHYFFMKKEVVKSRNKDLVQLFELGMGIHHAGMLRSDRGLT 754

Query: 119 EGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
           E LF +G ++VL  T TLA G+NLPAHTVVIK TQ ++ + G + +     ++Q+F
Sbjct: 755 ERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIF 810


>Medtr4g011450.1 | U5 small nuclear ribonucleoprotein 200 kDa
           helicase | HC | chr4:2793467-2800896 | 20130731
          Length = 2099

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 2/174 (1%)

Query: 2   RPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRLS 61
           RPV L+ +  G    K  F   + + +  F+ +M  +     LIF  +RK   + A+ + 
Sbjct: 680 RPVPLSQQFIGIT-VKKPFQRYQLMNDICFEKVMAEAGKHQVLIFVHSRKETAKTARAIR 738

Query: 62  QIVMTFGQSNPFI-TNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEG 120
              +       F+  +S   + L   +  +    ++  + YG   H+ G+   DR +VE 
Sbjct: 739 DTALANDTLGRFLKEDSASREILHSHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVED 798

Query: 121 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
           LF  G +QVL +T TLA G+NLPAHTV+IK T+ +N E+G + E     ++Q+ 
Sbjct: 799 LFASGHVQVLVSTATLAWGVNLPAHTVIIKGTKIYNPERGAWTELSPLDVMQML 852



 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 11/178 (6%)

Query: 1    MRPVKLTTKVFGYAPAKNDFLFEKRLQ---NYIFDILMQFSR-GKSALIFCSTRKGAQEA 56
            +RPV L   +     A     F+ R+Q      +  + Q ++ GK AL+F  TRK  +  
Sbjct: 1518 VRPVPLEIHIQSVDIAN----FKARMQAMTKRTYTAIAQHAKNGKPALVFVPTRKHVRLT 1573

Query: 57   AQRLSQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRN 116
               L            F+  S +   L      +SD+ ++  +  GVGY + GL   D +
Sbjct: 1574 TMDLITYSSADSGEKSFLLQSTK--ELEPFLNKISDEMLKVTLREGVGYLHEGLSSLDHD 1631

Query: 117  IVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
            IV  LF  G IQV   ++++ + + L AH VV+  T +++ E     +Y  + +LQ+ 
Sbjct: 1632 IVAQLFEAGWIQVCVLSSSMCYIVTLLAHLVVVMGTLYYDGENA-QTDYPVTDLLQMM 1688


>Medtr4g011450.2 | U5 small nuclear ribonucleoprotein 200 kDa
           helicase | HC | chr4:2793467-2800740 | 20130731
          Length = 2072

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 2/174 (1%)

Query: 2   RPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRLS 61
           RPV L+ +  G    K  F   + + +  F+ +M  +     LIF  +RK   + A+ + 
Sbjct: 680 RPVPLSQQFIGIT-VKKPFQRYQLMNDICFEKVMAEAGKHQVLIFVHSRKETAKTARAIR 738

Query: 62  QIVMTFGQSNPFI-TNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEG 120
              +       F+  +S   + L   +  +    ++  + YG   H+ G+   DR +VE 
Sbjct: 739 DTALANDTLGRFLKEDSASREILHSHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVED 798

Query: 121 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
           LF  G +QVL +T TLA G+NLPAHTV+IK T+ +N E+G + E     ++Q+ 
Sbjct: 799 LFASGHVQVLVSTATLAWGVNLPAHTVIIKGTKIYNPERGAWTELSPLDVMQML 852



 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 11/178 (6%)

Query: 1    MRPVKLTTKVFGYAPAKNDFLFEKRLQ---NYIFDILMQFSR-GKSALIFCSTRKGAQEA 56
            +RPV L   +     A     F+ R+Q      +  + Q ++ GK AL+F  TRK  +  
Sbjct: 1491 VRPVPLEIHIQSVDIAN----FKARMQAMTKRTYTAIAQHAKNGKPALVFVPTRKHVRLT 1546

Query: 57   AQRLSQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRN 116
               L            F+  S +   L      +SD+ ++  +  GVGY + GL   D +
Sbjct: 1547 TMDLITYSSADSGEKSFLLQSTK--ELEPFLNKISDEMLKVTLREGVGYLHEGLSSLDHD 1604

Query: 117  IVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
            IV  LF  G IQV   ++++ + + L AH VV+  T +++ E     +Y  + +LQ+ 
Sbjct: 1605 IVAQLFEAGWIQVCVLSSSMCYIVTLLAHLVVVMGTLYYDGENA-QTDYPVTDLLQMM 1661


>Medtr2g064740.1 | U5 small nuclear ribonucleoprotein 200 kDa
           helicase | HC | chr2:29260637-29270804 | 20130731
          Length = 2188

 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 2/174 (1%)

Query: 2   RPVKLTTKVFGYAPAKNDFLFEKRLQNYIFDILMQFSRGKSALIFCSTRKGAQEAAQRLS 61
           RPV L+ +  G    K    F+  + +  +  ++  +     LIF  +RK   + A+ + 
Sbjct: 725 RPVPLSQQYIGITIKKPLQRFQ-LMNDICYRKVLDVAGKHQVLIFVHSRKETAKTARAIR 783

Query: 62  QIVMTFGQSNPFI-TNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEG 120
              +       F+  +S   + L   +  +    ++  + YG   H+ G+   DR +VE 
Sbjct: 784 DAALADDTLGRFLKEDSASREILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVED 843

Query: 121 LFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
           LF  G  QVL +T TLA G+NLPAHTV+IK TQ +N EKG + E     ++Q+ 
Sbjct: 844 LFADGHAQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQML 897



 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)

Query: 1    MRPVKLTTKVFGYAPAKNDFLFEKRLQ---NYIFDILMQFSRGK-SALIFCSTRKGAQEA 56
            +RPV L   + G   A     FE R+Q      +  + Q ++ K  A++F  TRK  +  
Sbjct: 1563 VRPVPLEIHIQGVDIAN----FEARMQAMTKPTYTSIAQHAKNKKPAIVFVPTRKHVRLT 1618

Query: 57   AQRLSQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRN 116
            A  L           PF+  S  ++ L      +SD+ ++  +  GVGY + GL   D +
Sbjct: 1619 AVDLITYSGADSGEKPFLLRS--LEELEPFINKISDEMLKVTLREGVGYLHEGLNSLDHD 1676

Query: 117  IVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
            IV  LF  G IQV   ++++  G+ L AH VV+  TQ+++  +    +Y  + +LQ+ 
Sbjct: 1677 IVAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMM 1734


>Medtr0312s0040.1 | DNA polymerase theta-like protein | HC |
           scaffold0312:17550-12717 | 20130731
          Length = 880

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 6/130 (4%)

Query: 40  GKSALIFCSTRKGAQEAAQRLSQIVMTF----GQSN-PFITNSEQIDRLREASLSLSDKQ 94
           G+S LIFCS+RKG +   + +++ + +F     ++N  F   +  I+ LR+    L D  
Sbjct: 32  GQSVLIFCSSRKGCESTGRHVAKFLKSFTVDINENNCEFADITSAINSLRKCPAGL-DPV 90

Query: 95  MQSYILYGVGYHNGGLCLKDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQH 154
           ++     GV +H+ GL +++R IVE  + K  ++VL  T+TLA G+N PA  VVI   Q 
Sbjct: 91  LEETFPAGVAFHHAGLTVEEREIVETCYRKDLLRVLTATSTLAAGVNPPARRVVICKPQE 150

Query: 155 FNKEKGLYME 164
             K  GL  E
Sbjct: 151 LKKVMGLLNE 160


>Medtr1g008600.1 | ATP-binding; ATP-dependent helicase; DNA helicase
           | HC | chr1:991547-976147 | 20130731
          Length = 2177

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 6/117 (5%)

Query: 39  RGKSALIFCSTRKGAQEAAQRLSQIVMTF----GQSN-PFITNSEQIDRLREASLSLSDK 93
            G+S LIFCS+RKG +  A+ +++ + +F     ++N  F   +  I+ LR+    L D 
Sbjct: 777 EGQSVLIFCSSRKGCESTARHVAKFLKSFTVDINENNCEFADITSAINSLRKCPAGL-DP 835

Query: 94  QMQSYILYGVGYHNGGLCLKDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIK 150
            ++     GV +H+ GL +++R IVE  + KG ++VL  T+TLA G+NLPA  V+ +
Sbjct: 836 VLEETFPAGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFR 892


>Medtr1g007510.1 | DNA polymerase theta-like protein | HC |
           chr1:413021-417854 | 20130731
          Length = 912

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 6/116 (5%)

Query: 40  GKSALIFCSTRKGAQEAAQRLSQIVMTF----GQSN-PFITNSEQIDRLREASLSLSDKQ 94
           G+S LIFCS+RKG +   + +++ + +F     ++N  F   +  I+ LR+    L D  
Sbjct: 32  GQSVLIFCSSRKGCESTGRHVAKFLKSFTVDINENNCEFADITSAINSLRKCPAGL-DPV 90

Query: 95  MQSYILYGVGYHNGGLCLKDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIK 150
           ++     GV +H+ GL +++R IVE  + K  ++VL  T+TLA G+N PA  V+ +
Sbjct: 91  LEETFPAGVAFHHAGLTVEEREIVETCYRKDLLRVLTATSTLAAGVNPPARRVIFR 146


>Medtr3g462290.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
           HC | chr3:24871545-24853513 | 20130731
          Length = 1334

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 44  LIFCSTRKGAQEAAQRLSQIVMTFGQSNPFIT--NSEQIDRLREASLSLSDK-QMQSYIL 100
           +IFC ++    ++A  ++   +T       I     +   RL+ +  +L    +++S + 
Sbjct: 637 VIFCFSKNRCDKSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVESLLR 696

Query: 101 YGVGYHNGGLCLKDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFN 156
            G+G H+ GL    + +VE LF +G I+VL +T T A G+N PA TVV  + + F+
Sbjct: 697 RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTVRKFD 752


>Medtr5g069360.1 | DEAD/DEAH-box RNA helicase | HC |
           chr5:29403540-29411488 | 20130731
          Length = 967

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%)

Query: 93  KQMQSYILYGVGYHNGGLCLKDRNIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKST 152
           K++  ++  G+G H+ GL    + +VE LF +G ++ L  T T A G+N+PA TVV  S 
Sbjct: 373 KEVLPHLQRGIGIHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFSSV 432

Query: 153 QHFNKEKGLYM 163
           + ++  +  Y+
Sbjct: 433 KKWDGHEHRYI 443


>Medtr4g008780.1 | U5 small nuclear ribonucleoprotein 200 kDa
           helicase | HC | chr4:1682714-1679988 | 20130731
          Length = 890

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%)

Query: 1   MRPVKLTTKVFGYAPAKNDFLFEKRLQ---NYIFDILMQFSR-GKSALIFCSTRKGAQEA 56
           +RPV L   +     A     F+ R+Q      +  + Q ++ GK AL+F  TRK  +  
Sbjct: 280 VRPVPLEIHIQSVDIAN----FKARMQAMTKRTYTAIAQHAKNGKPALVFVPTRKHVRLT 335

Query: 57  AQRLSQIVMTFGQSNPFITNSEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRN 116
              L            F+  S +   L      +SD+ ++  +  GVGY + GL   D +
Sbjct: 336 TMDLITYSSADSGEKSFLLQSTK--ELEPFLNKISDEMLKVTLREGVGYLHEGLSSLDHD 393

Query: 117 IVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQVF 174
           I   LF  G IQ    ++++ +   L AH VV+  TQ+++ E     +Y  + +LQ+ 
Sbjct: 394 IEAQLFEAGWIQDCVLSSSMCYKDTLLAHLVVVMGTQYYDGENA-QTDYPVTDLLQMM 450


>Medtr2g064390.1 | U5 small nuclear ribonucleoprotein helicase | LC |
            chr2:29190848-29183241 | 20130731
          Length = 1579

 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 8/157 (5%)

Query: 22   FEKRLQ-----NYIFDILMQFSRGKSALIFCSTRKGAQEAAQRLSQIVMTFGQSNPFITN 76
            FE R+Q      YI  I       +++++F  +RK  +  A  L +     G    F+ N
Sbjct: 973  FEARMQAMTKPTYIA-ITQLVKNEQTSIVFVPSRKYVRLVAVDLIKYKGADGDKRSFLLN 1031

Query: 77   SEQIDRLREASLSLSDKQMQSYILYGVGYHNGGLCLKDRNIVEGLFLKGDIQVLCTTNTL 136
               +  L      +SD+ +++ +  GVG+ + GL   DR+IV   F  G IQV   T+++
Sbjct: 1032 P--LAELVPFINKISDEMLKTTLREGVGFLHEGLNGSDRDIVTQSFKSGLIQVCIITSSI 1089

Query: 137  AHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQV 173
               + L    V++  TQ+++  +     Y  + +LQ+
Sbjct: 1090 CREVKLSTPLVIVMGTQYYDGPENSQTNYPVADLLQM 1126