Miyakogusa Predicted Gene

Lj1g3v3642120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3642120.1 tr|I1N755|I1N755_SOYBN Peptide deformylase
OS=Glycine max GN=Gma.56724 PE=3
SV=1,73.78,0,PDEFORMYLASE,Formylmethionine deformylase;
Pep_deformylase,Formylmethionine deformylase; Peptide def,CUFF.30992.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g035310.1 | peptide deformylase 1A | HC | chr7:13439210-13...   332   2e-91
Medtr7g035310.2 | peptide deformylase 1A | HC | chr7:13439210-13...   284   6e-77
Medtr4g011040.1 | peptide deformylase 1A | HC | chr4:2587101-259...    95   8e-20
Medtr2g103420.1 | peptide deformylase 1A | LC | chr2:44525698-44...    87   1e-17
Medtr2g103430.1 | peptide deformylase 1A | HC | chr2:44530541-44...    81   8e-16

>Medtr7g035310.1 | peptide deformylase 1A | HC |
           chr7:13439210-13432030 | 20130731
          Length = 253

 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 162/208 (77%), Positives = 175/208 (84%)

Query: 46  QPELASPGDLEFVTPLKVVEYPDPRLRAKNKRIATFDDNLKKLVDEMFDVMYNTDGIGLS 105
           Q E AS GDLEF  PLK+ +YPDP+LR KNKRI TFDDNLKKLVDEMFDVMY TDGIGLS
Sbjct: 46  QNEFASLGDLEFEAPLKIAKYPDPKLRKKNKRIGTFDDNLKKLVDEMFDVMYETDGIGLS 105

Query: 106 APQVGINVQLMVFNPVGERGEGEEIVLINPRVSKYSKKLTLFNEGCLSFPGIYADVMRPE 165
           APQVGINVQLMVFNPVGERGEGEEIVL+NPRV K S   T++NEGCLSFPGI  DV RPE
Sbjct: 106 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVGKRSLNRTIYNEGCLSFPGIRGDVKRPE 165

Query: 166 SVKIDARDVNGTRFSFNLSDLPARVFQHEFDHLEGILFFDRMTDGVLDSIREQLQALEMK 225
            VKIDA DV G RFS +LS LPAR+FQHEFDHL+GILFF+RM D V DSIR QLQALE++
Sbjct: 166 YVKIDALDVKGKRFSVSLSGLPARIFQHEFDHLQGILFFERMADEVFDSIRGQLQALEIE 225

Query: 226 YERQTGFPSPEKIENHRRRKVAVGFGKS 253
           YE  TGFPSPEKIE+ R RKV  GFGKS
Sbjct: 226 YEEMTGFPSPEKIESRRTRKVPSGFGKS 253


>Medtr7g035310.2 | peptide deformylase 1A | HC |
           chr7:13439210-13432089 | 20130731
          Length = 222

 Score =  284 bits (726), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 138/177 (77%), Positives = 148/177 (83%)

Query: 46  QPELASPGDLEFVTPLKVVEYPDPRLRAKNKRIATFDDNLKKLVDEMFDVMYNTDGIGLS 105
           Q E AS GDLEF  PLK+ +YPDP+LR KNKRI TFDDNLKKLVDEMFDVMY TDGIGLS
Sbjct: 46  QNEFASLGDLEFEAPLKIAKYPDPKLRKKNKRIGTFDDNLKKLVDEMFDVMYETDGIGLS 105

Query: 106 APQVGINVQLMVFNPVGERGEGEEIVLINPRVSKYSKKLTLFNEGCLSFPGIYADVMRPE 165
           APQVGINVQLMVFNPVGERGEGEEIVL+NPRV K S   T++NEGCLSFPGI  DV RPE
Sbjct: 106 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVGKRSLNRTIYNEGCLSFPGIRGDVKRPE 165

Query: 166 SVKIDARDVNGTRFSFNLSDLPARVFQHEFDHLEGILFFDRMTDGVLDSIREQLQAL 222
            VKIDA DV G RFS +LS LPAR+FQHEFDHL+GILFF+RM D V DSIR QLQ  
Sbjct: 166 YVKIDALDVKGKRFSVSLSGLPARIFQHEFDHLQGILFFERMADEVFDSIRGQLQVC 222


>Medtr4g011040.1 | peptide deformylase 1A | HC |
           chr4:2587101-2591364 | 20130731
          Length = 267

 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 14/141 (9%)

Query: 81  FDDNLKKLVDEMFDVMYNTDGIGLSAPQVGINVQLMVFNPVGE--------------RGE 126
             D ++K++D+M  VM    G+GL+APQ+G++ +++V     E              R  
Sbjct: 102 MSDKVQKIIDDMIRVMRKAPGVGLAAPQIGVSSRIIVLEDTEEFISYAPKEVLKAQDRHP 161

Query: 127 GEEIVLINPRVSKYSKKLTLFNEGCLSFPGIYADVMRPESVKIDARDVNGTRFSFNLSDL 186
            + +V++NP++   SK+  LF EGCLS  G  A V R   V++   D NG       S  
Sbjct: 162 FDLLVILNPKLKSTSKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRNGEPIKITASGW 221

Query: 187 PARVFQHEFDHLEGILFFDRM 207
            AR+ QHE DHL+G L+ D+M
Sbjct: 222 QARILQHECDHLDGTLYVDKM 242


>Medtr2g103420.1 | peptide deformylase 1A | LC |
           chr2:44525698-44524200 | 20130731
          Length = 280

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 17/163 (10%)

Query: 63  VVEYPDPRLRAKNKRIATFD---DNLKKLVDEMFDVMYNTDGIGLSAPQVGINVQLMVF- 118
           +V+  DP L    + +   +   D ++K++D M  VM N  GI LSA ++GI ++++V  
Sbjct: 81  IVQAGDPVLHEPAREVDHSEINSDKIQKIIDGMILVMRNAPGISLSAQKIGIPLRIIVLE 140

Query: 119 -------------NPVGERGEGEEIVLINPRVSKYSKKLTLFNEGCLSFPGIYADVMRPE 165
                        N + +R   + +V++NP++   S K  LF EGCLS  G  A V R  
Sbjct: 141 EPKENLYNYTEEVNKIIDRRPFDLLVILNPKLKIKSNKTFLFFEGCLSVHGFQAVVERYL 200

Query: 166 SVKIDARDVNGTRFSFNLSDLPARVFQHEFDHLEGILFFDRMT 208
            V+++  D  G     N S   AR+ QHE DHL+G L+ D+M 
Sbjct: 201 DVEVEGFDRYGEPIKINASGWHARILQHECDHLDGTLYVDKMV 243


>Medtr2g103430.1 | peptide deformylase 1A | HC |
           chr2:44530541-44526335 | 20130731
          Length = 257

 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 14/140 (10%)

Query: 83  DNLKKLVDEMFDVMYNTDGIGLSAPQVGINVQLMVF--------------NPVGERGEGE 128
           D ++ ++D+M  VM    G+G++APQ+GI ++++V                   +R   +
Sbjct: 93  DKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRIIVLEDKEEFICYNTEEETKAQDRRPFD 152

Query: 129 EIVLINPRVSKYSKKLTLFNEGCLSFPGIYADVMRPESVKIDARDVNGTRFSFNLSDLPA 188
            +V++NP++   S +   F EGCLS     A V R   V++   D  G     N S   A
Sbjct: 153 LLVILNPKLKNKSNRTAFFFEGCLSVDRFQALVERYLDVEVTGFDRYGEPIKINASGWQA 212

Query: 189 RVFQHEFDHLEGILFFDRMT 208
           R+ QHE DHL+G L+ D+M 
Sbjct: 213 RILQHECDHLDGTLYVDKMV 232