Miyakogusa Predicted Gene

Lj1g3v3641790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3641790.1 Non Characterized Hit- tr|I3S7L6|I3S7L6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,35.86,0.00000000000004,seg,NULL; DUF588,Uncharacterised protein
family UPF0497, trans-membrane
plant,NODE_50939_length_1508_cov_64.187668.path1.1
         (166 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g034390.2 | transmembrane protein, putative | HC | chr7:12...   200   6e-52
Medtr7g034390.1 | transmembrane protein, putative | HC | chr7:12...   191   4e-49
Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC | chr4:43951...   156   9e-39
Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC | chr3:35146...   147   3e-36
Medtr6g007160.1 | transmembrane protein, putative | HC | chr6:14...   100   6e-22
Medtr7g071110.1 | CASP-like protein | HC | chr7:26328733-2633072...    68   5e-12
Medtr1g115285.1 | CASP-like protein | HC | chr1:51990203-5199161...    50   8e-07
Medtr4g013270.1 | CASP ARALYDRAFT-like protein | HC | chr4:36763...    48   4e-06

>Medtr7g034390.2 | transmembrane protein, putative | HC |
           chr7:12870052-12873486 | 20130731
          Length = 296

 Score =  200 bits (508), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 103/166 (62%), Positives = 116/166 (69%)

Query: 1   MRPDXXXXXXXXXXXXXXXXXMGFRVTAFVFCLVSCSVLASDKKKGWAQDSFYSYKEFRY 60
           +RPD                 +G RV  FVFCLVS SVLA+D+KKGWA DSFY YKEFRY
Sbjct: 131 LRPDVKSLLRSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRKKGWAIDSFYLYKEFRY 190

Query: 61  SMAVNVIGFVYSGLQICDLGLYLSTGKHVVEHRLRVYFSFALDQILTYLLMSASSSAATR 120
           S++VNVIGFVYS +QICDL  YL T KH+VEH+LR YF+FALDQILTYLLMSASSSAATR
Sbjct: 191 SLSVNVIGFVYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQILTYLLMSASSSAATR 250

Query: 121 AYDWQSNWGEDKFPYMANXXXXXXXXXXXXXXXXXXXXGSIICRFR 166
           AYDW+SNWG DKFP+MAN                    GSI+CRFR
Sbjct: 251 AYDWESNWGNDKFPFMANASVVLSFIAFAAFALTSLVSGSIVCRFR 296


>Medtr7g034390.1 | transmembrane protein, putative | HC |
           chr7:12870132-12874317 | 20130731
          Length = 303

 Score =  191 bits (484), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 96/138 (69%), Positives = 108/138 (78%)

Query: 1   MRPDXXXXXXXXXXXXXXXXXMGFRVTAFVFCLVSCSVLASDKKKGWAQDSFYSYKEFRY 60
           +RPD                 +G RV  FVFCLVS SVLA+D+KKGWA DSFY YKEFRY
Sbjct: 131 LRPDVKSLLRSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRKKGWAIDSFYLYKEFRY 190

Query: 61  SMAVNVIGFVYSGLQICDLGLYLSTGKHVVEHRLRVYFSFALDQILTYLLMSASSSAATR 120
           S++VNVIGFVYS +QICDL  YL T KH+VEH+LR YF+FALDQILTYLLMSASSSAATR
Sbjct: 191 SLSVNVIGFVYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQILTYLLMSASSSAATR 250

Query: 121 AYDWQSNWGEDKFPYMAN 138
           AYDW+SNWG DKFP+MAN
Sbjct: 251 AYDWESNWGNDKFPFMAN 268


>Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC |
           chr4:43951134-43949095 | 20130731
          Length = 288

 Score =  156 bits (394), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 91/116 (78%)

Query: 22  MGFRVTAFVFCLVSCSVLASDKKKGWAQDSFYSYKEFRYSMAVNVIGFVYSGLQICDLGL 81
           +GFR++  V CL+S SV+A+DK +GW+ DSF  YKE+RY +++ VIGFVY+G Q C+LG 
Sbjct: 143 LGFRISEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIGFVYAGFQACELGY 202

Query: 82  YLSTGKHVVEHRLRVYFSFALDQILTYLLMSASSSAATRAYDWQSNWGEDKFPYMA 137
            L TGKH+V H LR +F F +DQ+L YLL+S++SSAATR  DWQSNWG+D+F  MA
Sbjct: 203 QLITGKHIVNHHLRFHFDFLMDQVLAYLLISSASSAATRVDDWQSNWGKDEFTEMA 258


>Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC |
           chr3:35146346-35143714 | 20130731
          Length = 296

 Score =  147 bits (372), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 66/116 (56%), Positives = 88/116 (75%)

Query: 22  MGFRVTAFVFCLVSCSVLASDKKKGWAQDSFYSYKEFRYSMAVNVIGFVYSGLQICDLGL 81
           +GFR+   V CL+S SV+A++K +GW+ DS+  YKE+RY ++VNVIGF Y+ LQ CDL  
Sbjct: 149 LGFRLCEVVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSVNVIGFAYAALQACDLAF 208

Query: 82  YLSTGKHVVEHRLRVYFSFALDQILTYLLMSASSSAATRAYDWQSNWGEDKFPYMA 137
            L T KH++ H LR +F F +DQ++ YLL+SASSSAATR  DWQSNWG+D+F  MA
Sbjct: 209 QLVTEKHMISHHLRYHFQFFMDQVVAYLLISASSSAATRVDDWQSNWGKDEFTEMA 264


>Medtr6g007160.1 | transmembrane protein, putative | HC |
           chr6:1477503-1475465 | 20130731
          Length = 234

 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 25  RVTAFVFCLVSCSVLASDKKK--------GWAQDSF----------YSYKEFRYSMAVNV 66
           RV AFVFCL++ SVL + +++         W    F          Y + EFRYS A NV
Sbjct: 72  RVFAFVFCLIAFSVLGASEQRVLVSENLTNWYSSGFTIQTPYEFHWYKWDEFRYSFAANV 131

Query: 67  IGFVYSGLQICDLGLYLSTGKHVVEHRLRVYFSFALDQILTYLLMSASSSAATRAYDWQS 126
           IGFVYSGLQIC L +YL T KH +  +L+ YF+ A+DQ L Y+LMSASSSAAT A+  + 
Sbjct: 132 IGFVYSGLQICHLVMYLITKKHTINPKLQGYFNVAIDQTLAYILMSASSSAATAAHLLKD 191

Query: 127 NW---GEDKFPYMANXXXXXXXXXXXXXXXXXXXXGSIICRF 165
            W   G D F  MAN                    G I+CRF
Sbjct: 192 YWLEHGADTFIEMANASVSMSFLAFGAFALASLVSGIILCRF 233


>Medtr7g071110.1 | CASP-like protein | HC | chr7:26328733-26330721 |
           20130731
          Length = 202

 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 22  MGFRVTAFVFCLVSCSVLASDKKKGWAQDSFYSYKEFRYSMAVNVIGFVYSGLQICDLGL 81
           +G R    +F L+S  V+AS+K   W    F  Y+E+RY +A+ ++  +Y+G Q      
Sbjct: 59  LGLRGIGLLFSLISFIVMASNKHGDW--KDFDKYEEYRYLLAIAILSSLYTGAQAFRQVH 116

Query: 82  YLSTGKHVVEHRLRVYFSFALDQILTYLLMSASSSA 117
            LSTGK +++ R+     F  DQI+ YLL+S++SSA
Sbjct: 117 ELSTGKQLIKPRMAALIDFFGDQIMAYLLISSASSA 152


>Medtr1g115285.1 | CASP-like protein | HC | chr1:51990203-51991617 |
           20130731
          Length = 194

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 24  FRVTAFVFCLVSCSVLASDKKKGWAQDSFYSYKEFRYSMAVNVIGFVYSGLQICDLGLYL 83
           FR+T+F F L S   + +  + G     +Y +  FR+ +A N I   YS  ++      +
Sbjct: 42  FRLTSFSFSLASSIFMLATSRTG-DSPRWYHFDTFRFVVASNAIVATYSLFEMSASVWEI 100

Query: 84  STGKHVVEHRLRVYFSFALDQILTYLLMSASSSAATRA 121
           S G  +    L+V+F F  DQI  YLL+SAS++  + A
Sbjct: 101 SRGATLFPEVLQVWFDFGHDQIFAYLLLSASAAGTSMA 138


>Medtr4g013270.1 | CASP ARALYDRAFT-like protein | HC |
           chr4:3676397-3674459 | 20130731
          Length = 187

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 22  MGFRVTAFVFCLVSCSVLASDKKKGWAQDSFYSYKEFRYSMAVNVIGFVYSGLQICDLGL 81
           +G R     F L S  ++AS+K  G+ ++ F  Y+E+RY + V     +Y+G Q+     
Sbjct: 46  LGLRGVTLFFSLTSFLLMASNKH-GYGEN-FDHYQEYRYLLVVAFFTSIYTGSQVYRQIH 103

Query: 82  YLSTGKHVVEHRLRVYFSFALDQILTYLLMSASSSA 117
            L TG ++          F  DQ++ YLL+S++S+A
Sbjct: 104 ELITGNNIFRPTTAAVIDFVGDQVIAYLLISSASTA 139