Miyakogusa Predicted Gene

Lj1g3v3631710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3631710.1 Non Characterized Hit- tr|I1N7S3|I1N7S3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,84.85,0,Sua5_yciO_yrdC,YrdC-like domain; TIGR00057:
Sua5/YciO/YrdC/YwlC family protein,YrdC-like domain;
Yrd,NODE_66665_length_1262_cov_22.886688.path1.1
         (263 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g034590.3 | DHBP synthase RibB-like alpha/beta domain prot...   223   2e-58
Medtr7g034590.1 | DHBP synthase RibB-like alpha/beta domain prot...   221   7e-58
Medtr7g034590.2 | DHBP synthase RibB-like alpha/beta domain prot...   182   2e-46
Medtr6g045607.1 | telomere recombination domain protein | HC | c...   138   7e-33
Medtr6g045617.1 | DHBP synthase RibB-like alpha/beta domain prot...    97   1e-20
Medtr4g059530.1 | telomere recombination domain protein | HC | c...    55   1e-07
Medtr4g459430.1 | telomere recombination domain protein | HC | c...    55   1e-07

>Medtr7g034590.3 | DHBP synthase RibB-like alpha/beta domain
           protein, putative | HC | chr7:13106077-13103918 |
           20130731
          Length = 171

 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 105/131 (80%), Positives = 116/131 (88%)

Query: 1   MAAKRSPKRLKYTAGSRFNKGNGLLYIEADSSGSDSWKLEPVINLLKEGAVGVIPTDTIY 60
           MA KRSPKRLKYT  +RFNK  GL+YIEAD  GSDSWKLEPV+NLLK+GAVGVIPTDT+Y
Sbjct: 38  MAFKRSPKRLKYTDNTRFNKDGGLIYIEADPFGSDSWKLEPVVNLLKQGAVGVIPTDTLY 97

Query: 61  AIVCDLRSHSAIERLRRIKNIQGSKPLSILCHSFRDIDKYTTGFPLGDGQGHANLFRAVK 120
           AI CDL ++SAIERLRRIKNI GSKPLSILCHSF DIDKYT+GFP GDGQGHANLF+AVK
Sbjct: 98  AIACDLTNNSAIERLRRIKNIDGSKPLSILCHSFSDIDKYTSGFPCGDGQGHANLFKAVK 157

Query: 121 QCLPGPYTFIL 131
            CLPGP + +L
Sbjct: 158 HCLPGPVSILL 168


>Medtr7g034590.1 | DHBP synthase RibB-like alpha/beta domain
           protein, putative | HC | chr7:13106077-13098550 |
           20130731
          Length = 185

 Score =  221 bits (562), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 104/126 (82%), Positives = 113/126 (89%)

Query: 1   MAAKRSPKRLKYTAGSRFNKGNGLLYIEADSSGSDSWKLEPVINLLKEGAVGVIPTDTIY 60
           MA KRSPKRLKYT  +RFNK  GL+YIEAD  GSDSWKLEPV+NLLK+GAVGVIPTDT+Y
Sbjct: 38  MAFKRSPKRLKYTDNTRFNKDGGLIYIEADPFGSDSWKLEPVVNLLKQGAVGVIPTDTLY 97

Query: 61  AIVCDLRSHSAIERLRRIKNIQGSKPLSILCHSFRDIDKYTTGFPLGDGQGHANLFRAVK 120
           AI CDL ++SAIERLRRIKNI GSKPLSILCHSF DIDKYT+GFP GDGQGHANLF+AVK
Sbjct: 98  AIACDLTNNSAIERLRRIKNIDGSKPLSILCHSFSDIDKYTSGFPCGDGQGHANLFKAVK 157

Query: 121 QCLPGP 126
            CLPGP
Sbjct: 158 HCLPGP 163


>Medtr7g034590.2 | DHBP synthase RibB-like alpha/beta domain
           protein, putative | HC | chr7:13106082-13103918 |
           20130731
          Length = 153

 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/131 (69%), Positives = 100/131 (76%), Gaps = 18/131 (13%)

Query: 1   MAAKRSPKRLKYTAGSRFNKGNGLLYIEADSSGSDSWKLEPVINLLKEGAVGVIPTDTIY 60
           MA KRSPKRLKYT  +RFNK  GL+YIEAD  GSDSWKLEPV+NLLK+GAVGVIPTDT+ 
Sbjct: 38  MAFKRSPKRLKYTDNTRFNKDGGLIYIEADPFGSDSWKLEPVVNLLKQGAVGVIPTDTL- 96

Query: 61  AIVCDLRSHSAIERLRRIKNIQGSKPLSILCHSFRDIDKYTTGFPLGDGQGHANLFRAVK 120
                            IKNI GSKPLSILCHSF DIDKYT+GFP GDGQGHANLF+AVK
Sbjct: 97  -----------------IKNIDGSKPLSILCHSFSDIDKYTSGFPCGDGQGHANLFKAVK 139

Query: 121 QCLPGPYTFIL 131
            CLPGP + +L
Sbjct: 140 HCLPGPVSILL 150


>Medtr6g045607.1 | telomere recombination domain protein | HC |
           chr6:16508805-16511304 | 20130731
          Length = 217

 Score =  138 bits (347), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 62/78 (79%), Positives = 69/78 (88%)

Query: 132 IASKELPKQCIRFGTTAARFASRKNVGVRMPDDAICQTILNQMDAPLICTSIKFLKEDEW 191
           +ASK LPKQCIRFGTTAA++A+RKNVGVRMPDDAICQ IL +M  PLICTSIKFL EDEW
Sbjct: 1   MASKALPKQCIRFGTTAAKYAARKNVGVRMPDDAICQAILKEMSTPLICTSIKFLNEDEW 60

Query: 192 MIDPVIIADTYGPEGLDF 209
           +IDPV+IADTYGPE  D 
Sbjct: 61  LIDPVMIADTYGPEEDDI 78


>Medtr6g045617.1 | DHBP synthase RibB-like alpha/beta domain
           protein, putative | HC | chr6:16518656-16519166 |
           20130731
          Length = 109

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 54/68 (79%)

Query: 1   MAAKRSPKRLKYTAGSRFNKGNGLLYIEADSSGSDSWKLEPVINLLKEGAVGVIPTDTIY 60
           MA KRSPKRLKYT  +R NK  GL+YIEAD  GSDSWKLEPV+NLLK+GAVGVIPTDT+ 
Sbjct: 38  MAFKRSPKRLKYTDNTRLNKDGGLIYIEADPFGSDSWKLEPVVNLLKQGAVGVIPTDTLS 97

Query: 61  AIVCDLRS 68
            +   L S
Sbjct: 98  VLSIYLFS 105


>Medtr4g059530.1 | telomere recombination domain protein | HC |
           chr4:21926816-21922843 | 20130731
          Length = 349

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 90/216 (41%), Gaps = 32/216 (14%)

Query: 33  GSDSWKLEPVINLLKEGAVGVIPTDTIYAIVCDLRSHSAIERLRRIKNIQGSKPLSILCH 92
            +D++  E V   LK G V  +PTDT+Y   CD  S  A+ R+  IK  + + PL+I   
Sbjct: 22  ATDAYAAEAV-ETLKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVG 80

Query: 93  SFRDIDKYTTGFPLGDGQGHANLFRAVKQCLPGPYTFILIASKELPKQCIRFGTTAARFA 152
              DI++    F L D   H  L       LPGP T +L             G ++A   
Sbjct: 81  DVSDINR----FALTDHLPHGLL----DSLLPGPVTVVL-----------SRGESSALER 121

Query: 153 SRK----NVGVRMPDDAICQTILNQMDAPLICTSIKFLKEDEWMIDPVIIADTYG-PEGL 207
           S      ++GVR+PD    + I       L  TS     +       V I D     E  
Sbjct: 122 SLNPGFDSIGVRVPDCNFIRLIARGSGTALALTSANLSGQPS----SVCIKDFEKLWEHC 177

Query: 208 DFVVDGGVRVA--EPSTVVDMRK-MPPKVLRQGKGP 240
             V DGG+  +    STVVD+      K+LR G+ P
Sbjct: 178 ASVYDGGLLPSGRAGSTVVDLSTPYKYKILRPGRIP 213


>Medtr4g459430.1 | telomere recombination domain protein | HC |
           chr4:21870467-21866982 | 20130731
          Length = 349

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 90/216 (41%), Gaps = 32/216 (14%)

Query: 33  GSDSWKLEPVINLLKEGAVGVIPTDTIYAIVCDLRSHSAIERLRRIKNIQGSKPLSILCH 92
            +D++  E V   LK G V  +PTDT+Y   CD  S  A+ R+  IK  + + PL+I   
Sbjct: 22  ATDAYAAEAV-ETLKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVG 80

Query: 93  SFRDIDKYTTGFPLGDGQGHANLFRAVKQCLPGPYTFILIASKELPKQCIRFGTTAARFA 152
              DI++    F L D   H  L       LPGP T +L             G ++A   
Sbjct: 81  DVSDINR----FALTDHLPHGLL----DSLLPGPVTVVL-----------SRGESSALER 121

Query: 153 SRK----NVGVRMPDDAICQTILNQMDAPLICTSIKFLKEDEWMIDPVIIADTYG-PEGL 207
           S      ++GVR+PD    + I       L  TS     +       V I D     E  
Sbjct: 122 SLNPGFDSIGVRVPDCNFIRLIARGSGTALALTSANLSGQPS----SVCIKDFEKLWEHC 177

Query: 208 DFVVDGGVRVA--EPSTVVDMRK-MPPKVLRQGKGP 240
             V DGG+  +    STVVD+      K+LR G+ P
Sbjct: 178 ASVYDGGLLPSGRAGSTVVDLSTPYKYKILRPGRIP 213