Miyakogusa Predicted Gene

Lj1g3v3608420.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3608420.2 Non Characterized Hit- tr|K4CW72|K4CW72_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,68.49,0,NUCLEOLAR GTP-BINDING PROTEIN 1,NULL; DEVELOPMENTALLY
REGULATED GTP-BINDING PROTEIN-RELATED,NULL; P-,CUFF.30976.2
         (435 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g450930.1 | P-loop nucleoside triphosphate hydrolase super...   717   0.0  
Medtr7g450930.2 | P-loop nucleoside triphosphate hydrolase super...   690   0.0  
Medtr7g450930.3 | P-loop nucleoside triphosphate hydrolase super...   612   e-175
Medtr8g018150.1 | nucleolar GTP-binding-like protein | HC | chr8...   122   9e-28
Medtr2g078050.1 | nucleolar GTP-binding-like protein | HC | chr2...   115   1e-25
Medtr2g078050.2 | nucleolar GTP-binding-like protein | HC | chr2...   106   5e-23
Medtr2g019790.1 | Obg family GTPase CgtA | HC | chr2:6528744-652...    57   3e-08
Medtr2g019790.2 | Obg family GTPase CgtA | HC | chr2:6528707-652...    57   3e-08
Medtr1g073010.1 | Obg family GTPase CgtA | HC | chr1:32424577-32...    52   9e-07

>Medtr7g450930.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:17051519-17040734 |
           20130731
          Length = 436

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/436 (81%), Positives = 388/436 (88%), Gaps = 3/436 (0%)

Query: 1   MKASSSFLLKTHIPSSILLLTSSKVKPSAKLHPNLCFFCKSIQTDSYQVADGSYVPT--L 58
           MKA S+  LKTH PSSI LLT+ K K +AKL P+LCF CKSIQT SY+VA GSYVPT  L
Sbjct: 1   MKAPSTLFLKTHFPSSISLLTNPKGKLNAKLLPHLCF-CKSIQTSSYEVAKGSYVPTPTL 59

Query: 59  DPTNQNKTMERPPRTVESIGAFQKLPIVMPSIDILGSALRKAKRVPPTKGIPNIAKRERN 118
           +   +N  ME+P RT ES+GAFQKLPIVMPS+DILGSAL+KA+R+  TKGI NIAKRE+N
Sbjct: 60  EQIKENNMMEKPSRTFESVGAFQKLPIVMPSVDILGSALKKARRISATKGIVNIAKREKN 119

Query: 119 KGAKQLDALMKELAVPLRTYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKR 178
           KGAKQLDALMKELAVPLRTYVENFPNKTHLHPYERSL+ELTLGDG+YEKVL  VD LRKR
Sbjct: 120 KGAKQLDALMKELAVPLRTYVENFPNKTHLHPYERSLIELTLGDGYYEKVLGQVDGLRKR 179

Query: 179 VVLVGKEQASLCAKSTTKREAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVIN 238
           VV VGKE ASLCAKS TKREAEERL EGLK IEE F QER+VVD+LL+IAKTLRAMPVIN
Sbjct: 180 VVSVGKEHASLCAKSLTKREAEERLTEGLKIIEESFGQERKVVDDLLNIAKTLRAMPVIN 239

Query: 239 LETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGL 298
           LETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIV N+QKFQVTDTPGL
Sbjct: 240 LETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVFNHQKFQVTDTPGL 299

Query: 299 LKRHDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWL 358
           LKRHDDDRNNLEKLTLAVLS+LPTAVLYVHDL+GECGTSPSDQ+SIYK++KERF GHLWL
Sbjct: 300 LKRHDDDRNNLEKLTLAVLSYLPTAVLYVHDLSGECGTSPSDQYSIYKEIKERFDGHLWL 359

Query: 359 NVVSKSDLLRTSPVIYATEEPHCAEQELEKYRKSGPDGAINVSVKTQEGLHELKQRVHEL 418
           +VVSK+DLLRTSPVIYATE+    + ELEKYRKSGPDGAINVSV T+EG+HELK RV+EL
Sbjct: 360 DVVSKADLLRTSPVIYATEDRDLTQHELEKYRKSGPDGAINVSVTTEEGIHELKHRVNEL 419

Query: 419 LKLQMAKINYISSDQE 434
           L LQM KI   S++QE
Sbjct: 420 LNLQMTKIKDASNNQE 435


>Medtr7g450930.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:17051516-17040823 |
           20130731
          Length = 413

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/412 (82%), Positives = 370/412 (89%), Gaps = 3/412 (0%)

Query: 1   MKASSSFLLKTHIPSSILLLTSSKVKPSAKLHPNLCFFCKSIQTDSYQVADGSYVPT--L 58
           MKA S+  LKTH PSSI LLT+ K K +AKL P+LCF CKSIQT SY+VA GSYVPT  L
Sbjct: 1   MKAPSTLFLKTHFPSSISLLTNPKGKLNAKLLPHLCF-CKSIQTSSYEVAKGSYVPTPTL 59

Query: 59  DPTNQNKTMERPPRTVESIGAFQKLPIVMPSIDILGSALRKAKRVPPTKGIPNIAKRERN 118
           +   +N  ME+P RT ES+GAFQKLPIVMPS+DILGSAL+KA+R+  TKGI NIAKRE+N
Sbjct: 60  EQIKENNMMEKPSRTFESVGAFQKLPIVMPSVDILGSALKKARRISATKGIVNIAKREKN 119

Query: 119 KGAKQLDALMKELAVPLRTYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKR 178
           KGAKQLDALMKELAVPLRTYVENFPNKTHLHPYERSL+ELTLGDG+YEKVL  VD LRKR
Sbjct: 120 KGAKQLDALMKELAVPLRTYVENFPNKTHLHPYERSLIELTLGDGYYEKVLGQVDGLRKR 179

Query: 179 VVLVGKEQASLCAKSTTKREAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVIN 238
           VV VGKE ASLCAKS TKREAEERL EGLK IEE F QER+VVD+LL+IAKTLRAMPVIN
Sbjct: 180 VVSVGKEHASLCAKSLTKREAEERLTEGLKIIEESFGQERKVVDDLLNIAKTLRAMPVIN 239

Query: 239 LETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGL 298
           LETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIV N+QKFQVTDTPGL
Sbjct: 240 LETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVFNHQKFQVTDTPGL 299

Query: 299 LKRHDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWL 358
           LKRHDDDRNNLEKLTLAVLS+LPTAVLYVHDL+GECGTSPSDQ+SIYK++KERF GHLWL
Sbjct: 300 LKRHDDDRNNLEKLTLAVLSYLPTAVLYVHDLSGECGTSPSDQYSIYKEIKERFDGHLWL 359

Query: 359 NVVSKSDLLRTSPVIYATEEPHCAEQELEKYRKSGPDGAINVSVKTQEGLHE 410
           +VVSK+DLLRTSPVIYATE+    + ELEKYRKSGPDGAINVSV T+EG+HE
Sbjct: 360 DVVSKADLLRTSPVIYATEDRDLTQHELEKYRKSGPDGAINVSVTTEEGIHE 411


>Medtr7g450930.3 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:17049230-17040823 |
           20130731
          Length = 349

 Score =  612 bits (1578), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 296/348 (85%), Positives = 321/348 (92%)

Query: 87  MPSIDILGSALRKAKRVPPTKGIPNIAKRERNKGAKQLDALMKELAVPLRTYVENFPNKT 146
           MPS+DILGSAL+KA+R+  TKGI NIAKRE+NKGAKQLDALMKELAVPLRTYVENFPNKT
Sbjct: 1   MPSVDILGSALKKARRISATKGIVNIAKREKNKGAKQLDALMKELAVPLRTYVENFPNKT 60

Query: 147 HLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQASLCAKSTTKREAEERLNEG 206
           HLHPYERSL+ELTLGDG+YEKVL  VD LRKRVV VGKE ASLCAKS TKREAEERL EG
Sbjct: 61  HLHPYERSLIELTLGDGYYEKVLGQVDGLRKRVVSVGKEHASLCAKSLTKREAEERLTEG 120

Query: 207 LKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGAPNVGKSSLVHVLSTGKP 266
           LK IEE F QER+VVD+LL+IAKTLRAMPVINLETPTLCLVGAPNVGKSSLVHVLSTGKP
Sbjct: 121 LKIIEESFGQERKVVDDLLNIAKTLRAMPVINLETPTLCLVGAPNVGKSSLVHVLSTGKP 180

Query: 267 EICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNNLEKLTLAVLSHLPTAVLY 326
           EICNYPFTTRGILMGHIV N+QKFQVTDTPGLLKRHDDDRNNLEKLTLAVLS+LPTAVLY
Sbjct: 181 EICNYPFTTRGILMGHIVFNHQKFQVTDTPGLLKRHDDDRNNLEKLTLAVLSYLPTAVLY 240

Query: 327 VHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDLLRTSPVIYATEEPHCAEQEL 386
           VHDL+GECGTSPSDQ+SIYK++KERF GHLWL+VVSK+DLLRTSPVIYATE+    + EL
Sbjct: 241 VHDLSGECGTSPSDQYSIYKEIKERFDGHLWLDVVSKADLLRTSPVIYATEDRDLTQHEL 300

Query: 387 EKYRKSGPDGAINVSVKTQEGLHELKQRVHELLKLQMAKINYISSDQE 434
           EKYRKSGPDGAINVSV T+EG+HELK RV+ELL LQM KI   S++QE
Sbjct: 301 EKYRKSGPDGAINVSVTTEEGIHELKHRVNELLNLQMTKIKDASNNQE 348


>Medtr8g018150.1 | nucleolar GTP-binding-like protein | HC |
           chr8:6128625-6132452 | 20130731
          Length = 673

 Score =  122 bits (305), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 142/297 (47%), Gaps = 19/297 (6%)

Query: 80  FQKLPIVMPSIDILGSALRKAKRVPPT---KGIPNIAKRERNKGAKQLDALMKELAVPLR 136
           F+K+ +V    D +   L + +R  PT   KG      R R    +++          L 
Sbjct: 6   FKKITVVPNGKDFVDIILSRTQRQTPTVVHKGYA--ISRLRQFYMRKVKYTQTNFHEKLS 63

Query: 137 TYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQASLCAKSTT- 195
           T ++ FP    +HP+   L+ +     HY+  L  ++  R  +  + K+   L     + 
Sbjct: 64  TIIDEFPRLGDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVKLLKYGDSL 123

Query: 196 ------KREAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGA 249
                 K  A  R+   LK+I    A        L  + + +  +P I+  T T+ + G 
Sbjct: 124 YRCKCLKVAALGRMCTVLKRIGPSLAY-------LEQVRQHMARLPSIDPNTRTILICGY 176

Query: 250 PNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNNL 309
           PNVGKSS ++ ++    E+  Y FTT+ + +GH    Y ++QV DTPG+L R  +DRN +
Sbjct: 177 PNVGKSSFINKITRADVEVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNII 236

Query: 310 EKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDL 366
           E  ++  L+HL  A+L+  D++G CG + + Q ++++ +K  F     + V +K+DL
Sbjct: 237 EMCSITALAHLRAAILFFLDISGSCGYTIAQQAALFQSIKSLFLNKPLIVVCNKTDL 293


>Medtr2g078050.1 | nucleolar GTP-binding-like protein | HC |
           chr2:32395710-32397743 | 20130731
          Length = 650

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 28/290 (9%)

Query: 80  FQKLPIVMPSIDILGSALRKAKRVPPT---KGIPNIAKRERNKGAKQLDALMKELAVPLR 136
           F+K+ +V    D +   L + +R  PT   KG      R R    +++          L 
Sbjct: 6   FKKITVVPNGKDFVDIILSRTQRQTPTVVHKGYA--ISRLRQFYMRKVKYTQTNFHEKLS 63

Query: 137 TYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQASLCAKSTTK 196
           T ++ FP    +HP+   L+ +     HY+  L                  SL      K
Sbjct: 64  TIIDEFPRLGDIHPFYGDLLHVLYNKDHYKLALGD----------------SLYRCKCLK 107

Query: 197 REAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGAPNVGKSS 256
             A  R+   LK+I    A        L  + + +  +P I+  T T+ + G PNVGKSS
Sbjct: 108 VAALGRMCTVLKRIGPSLAY-------LEQVRQHMARLPSIDPNTRTILICGYPNVGKSS 160

Query: 257 LVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNNLEKLTLAV 316
            ++ ++    E+  Y FTT+ + +GH    Y ++QV DTPG+L R  +DRN +E  ++  
Sbjct: 161 FINKITRADVEVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 220

Query: 317 LSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDL 366
           L+HL  A+L+  D++G CG + + Q ++++ +K  F     + V +K+DL
Sbjct: 221 LAHLRAAILFFLDISGSCGYTIAQQAALFQSIKSLFLNKPLIVVCNKTDL 270


>Medtr2g078050.2 | nucleolar GTP-binding-like protein | HC |
           chr2:32395288-32398450 | 20130731
          Length = 537

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 82/133 (61%)

Query: 234 MPVINLETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVT 293
           +P I+  T T+ + G PNVGKSS ++ ++    E+  Y FTT+ + +GH    Y ++QV 
Sbjct: 25  LPSIDPNTRTILICGYPNVGKSSFINKITRADVEVQPYAFTTKSLFVGHTDYKYLRYQVI 84

Query: 294 DTPGLLKRHDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFT 353
           DTPG+L R  +DRN +E  ++  L+HL  A+L+  D++G CG + + Q ++++ +K  F 
Sbjct: 85  DTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYTIAQQAALFQSIKSLFL 144

Query: 354 GHLWLNVVSKSDL 366
               + V +K+DL
Sbjct: 145 NKPLIVVCNKTDL 157


>Medtr2g019790.1 | Obg family GTPase CgtA | HC |
           chr2:6528744-6523643 | 20130731
          Length = 617

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 244 LCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQK-FQVTDTPGLLK 300
           + +VGAPN GKS+L+ V+S  KPE+ NYPFTT    +G +  +Y     V D PGLL+
Sbjct: 321 VGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLE 378


>Medtr2g019790.2 | Obg family GTPase CgtA | HC |
           chr2:6528707-6523643 | 20130731
          Length = 617

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 244 LCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQK-FQVTDTPGLLK 300
           + +VGAPN GKS+L+ V+S  KPE+ NYPFTT    +G +  +Y     V D PGLL+
Sbjct: 321 VGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLE 378


>Medtr1g073010.1 | Obg family GTPase CgtA | HC |
           chr1:32424577-32421281 | 20130731
          Length = 512

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 13/119 (10%)

Query: 244 LCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHD 303
           +  VG PN GKS+L+  +S  KP + +Y FTT    +G++  +     V D PGL+K   
Sbjct: 327 VSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNYDDMSIIVADIPGLIKGAH 386

Query: 304 DDRNNLEKLTLAVLSHLP-TAVL-YVHD----LTGECGTSPSDQFSIYKDMKERFTGHL 356
            +R     L  A L H+  T VL YV D    L G  G SP +Q    KD+      HL
Sbjct: 387 QNRG----LGHAFLRHIERTKVLAYVVDVAAALPGRKGISPWEQL---KDLVLELEYHL 438