Miyakogusa Predicted Gene

Lj1g3v3597270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3597270.1 Non Characterized Hit- tr|I1JUA1|I1JUA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.837 PE=4,77.73,0,no
description,Forkhead-associated (FHA) domain; no description,NULL;
Phospholipase D/nuclease,NULL;,CUFF.30952.1
         (636 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g050860.1 | tyrosyl-DNA phosphodiesterase | HC | chr7:1775...   944   0.0  
Medtr8g095490.1 | tyrosyl-DNA phosphodiesterase | HC | chr8:3996...    59   2e-08

>Medtr7g050860.1 | tyrosyl-DNA phosphodiesterase | HC |
           chr7:17758152-17770806 | 20130731
          Length = 634

 Score =  944 bits (2440), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/643 (73%), Positives = 513/643 (79%), Gaps = 20/643 (3%)

Query: 4   SHSHSHVGYLVPLNHNLDEE--PSLPKLPISGGANLIGRNNIAVSDKRLSRNHLTLTASP 61
           S SHS +GYL+PLN N +E+   S PKL IS G N+IGRNN+ V+DKRLSR HLT+TAS 
Sbjct: 2   SFSHSQIGYLIPLNPNSEEKEKASTPKLTISDGTNIIGRNNVPVNDKRLSRKHLTITAS- 60

Query: 62  GGGAASLLVEGTNPIVVNSGNKRRKLNSLESATVSDGDVIELIPGHHLFKYQVLPXXXXX 121
             G A+L VEGTNP+VVNSGNKRRKLNS ++A + DGDVIELIPGH+LFKYQV       
Sbjct: 61  ADGTANLHVEGTNPVVVNSGNKRRKLNSKQTAAIFDGDVIELIPGHYLFKYQV---SQRS 117

Query: 122 XXXXXQPHHDDEVERGRNAV--------VAQNAGRSRLCEEEAIRDFRVPEDELPCTFRL 173
                  HH    ERG+N+         V Q  G SR CEE  IRDFRV +D++PCTFRL
Sbjct: 118 PKVADNKHH----ERGKNSATQRHDKIAVTQKHGSSRSCEE-PIRDFRVADDQIPCTFRL 172

Query: 174 LRVKGLPAWANTCSVSIGDVIQGDIQIAILSNYMVDIDWLIPACPALSKVPHVLVIHGES 233
           LRV+GLP WANT  VSI DVIQGDI +A+LSNYMVD+DWL+PACPALSKVPHVLV+HGES
Sbjct: 173 LRVQGLPPWANTSCVSISDVIQGDILVAVLSNYMVDVDWLVPACPALSKVPHVLVLHGES 232

Query: 234 DERVNYLKRSKPANWTLHKPPLPISFGTHHSKAMLLVYPRGVRIIVHTAHLIHVDWNNKS 293
           DERV  +KRSKP NW LHKPPLPISFGTHHSKAM LVYPRGVR+I+HTA+LI+VDWNNKS
Sbjct: 233 DERVACIKRSKPKNWILHKPPLPISFGTHHSKAMFLVYPRGVRVIIHTANLIYVDWNNKS 292

Query: 294 QGLWMQDFPWKDQNSLSKGSGFENDLVEYLSMLKWPEFSVKLPSHGNFSICPSFFKKFDY 353
           QGLWMQDFPWKDQNS SKGS FENDLVEYLS LKWPEFSV LPS GNFSICPSFFKKFDY
Sbjct: 293 QGLWMQDFPWKDQNSPSKGSRFENDLVEYLSALKWPEFSVNLPSLGNFSICPSFFKKFDY 352

Query: 354 SDAMVRLIASVPGYHSGTGLKKWGHMKLRSLLQDCTFDEEFKKSPLVYHFSSLGSLDEKW 413
           SDAMVRLIASVPGYHSG GLKKWGHMKLRS+LQ+CTFD+EFKKSPLVY FSSLGSLDEKW
Sbjct: 353 SDAMVRLIASVPGYHSGNGLKKWGHMKLRSVLQECTFDKEFKKSPLVYQFSSLGSLDEKW 412

Query: 414 MTEXXXXXXXXXXEDKTPLGMGEPQIIWPRVEDVRCSLEGYAAGSAIPSPLKNVEKAFLR 473
           M E          EDK PLGMGEPQIIWP VE+VRCS+EGYAAGSAIPSP+KNVEKAFL+
Sbjct: 413 MVELASSMSAGLSEDKVPLGMGEPQIIWPTVEEVRCSIEGYAAGSAIPSPMKNVEKAFLK 472

Query: 474 KYWAKWKAEHTGRDRAMPHIKTFTRYNGQNLAWFLLTSANLSKAAWGALQKNNTQLMVRS 533
           KYWAKWKA HTGR RAMPHIKTF RYN QNLAWF LTS+NLSKAAWGALQKNN+QLM+RS
Sbjct: 473 KYWAKWKANHTGRTRAMPHIKTFARYNNQNLAWFCLTSSNLSKAAWGALQKNNSQLMIRS 532

Query: 534 YELGVLFLPSLLKRRGTGFSCTSNVTLSEDKCPAHETSEMXXXXXXXXXXXXMETTPSSS 593
           YELGVLFLPSLLK  G GFSCTSNV  S+DK PA ETS+M             +TT SSS
Sbjct: 533 YELGVLFLPSLLK-PGCGFSCTSNVKQSKDKSPAQETSKMKKTKLVTLTAPTRDTTHSSS 591

Query: 594 EXXXXXXXXXXXXXXXXSSEDVPWSWDRRYTKKDVYGQVWPRM 636
           E                SSEDVPWSWDRRY KKD YGQVWPRM
Sbjct: 592 EVIIQLPVPYELPPLPYSSEDVPWSWDRRYFKKDDYGQVWPRM 634


>Medtr8g095490.1 | tyrosyl-DNA phosphodiesterase | HC |
           chr8:39969676-39961395 | 20130731
          Length = 1064

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 43/216 (19%)

Query: 187 SVSIGDVIQ--GDIQIAILSNYMVDIDWLIPACPALSKVPHVLVIHG-------ESDERV 237
           S+S+ ++I     +    ++ +  DI W +  C     +P  +           + DERV
Sbjct: 377 SISLTELIHPIESVTRMFIATFTSDITWFLTYCKIPYHLPVTIACQNTEKCWSSKPDERV 436

Query: 238 NYLKRSKPANWTLHKPPLP--ISFG---------THHSKAMLLVYPRGVRIIVHTAHLIH 286
               ++ P N  +  PP P  I+FG          HH K ++L     +R+I+ +A+L+ 
Sbjct: 437 FVPYQNYP-NLVVVHPPFPETIAFGKDHKRHGIACHHPKLIVLQREDSIRVIITSANLVE 495

Query: 287 VDWNNKSQGLWMQDFPWK------------DQNSLSKGS--GFENDLVEYLSMLKWPEFS 332
             WN+ +  +W QDFP              D + + + S   F   L  +++ L      
Sbjct: 496 KQWNSVTNTIWWQDFPRAILVDYASLFRKIDDDEVHRNSKCDFAAQLAGFMASL-----V 550

Query: 333 VKLPSHGNFSICPSFFKKFDYSDAMVRLIASVPGYH 368
           + +PS  ++    +   K+D+  A   L+AS+PG H
Sbjct: 551 IDVPSQAHW---ITQLTKYDFGSATGHLVASLPGIH 583