Miyakogusa Predicted Gene

Lj1g3v3597200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3597200.1 tr|G7KWY6|G7KWY6_MEDTR D-amino acid dehydrogenase
small subunit OS=Medicago truncatula GN=MTR_7g0512,81.24,0,SARCOSINE
DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (SARDH)(EC 1.5.99.1)(BPR-2)
SO,NULL; FAD NAD BINDI,CUFF.30949.1
         (481 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g051240.1 | FAD-dependent oxidoreductase | HC | chr7:17945...   741   0.0  
Medtr7g051240.2 | FAD-dependent oxidoreductase | HC | chr7:17945...   645   0.0  
Medtr7g051240.3 | FAD-dependent oxidoreductase | HC | chr7:17943...   645   0.0  

>Medtr7g051240.1 | FAD-dependent oxidoreductase | HC |
           chr7:17945735-17939463 | 20130731
          Length = 469

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/437 (80%), Positives = 394/437 (90%), Gaps = 2/437 (0%)

Query: 44  WKIPTTGNQLVPRFXXXXXXXXXQEFDVVIVGAGIIGLTIARQFLLGSDLSIAIVDKGVP 103
           +K P TGN++   +         + FDVVIVGAGIIGLT+ARQFL+ SDLS+AIVDKG+P
Sbjct: 34  YKFPATGNRMARLYSSSDDRA--KVFDVVIVGAGIIGLTVARQFLMDSDLSVAIVDKGLP 91

Query: 104 CSGATGAGQGYLWMTHKTPGSDIWDLTWRSHQLWKMLAGSLEEQGLDPTLELGWKKTGSL 163
           CSGATGAGQGYLWMTHKTPGS  WDL+ RSHQLW M+A +L+EQGLDP +ELGWKKTGSL
Sbjct: 92  CSGATGAGQGYLWMTHKTPGSATWDLSMRSHQLWTMMAENLQEQGLDPIVELGWKKTGSL 151

Query: 164 LVGRTHAESDMLKGRVKQLSAAGLKAEYLCTSDLFKQEPDLLVEKDSAAAFLPDDCQLDA 223
           LVGRT AESDMLKGRVKQLS AGLKAE+L +SDL K+EPDLLV+KD+AAAFLPDDCQLDA
Sbjct: 152 LVGRTRAESDMLKGRVKQLSEAGLKAEFLGSSDLLKREPDLLVDKDTAAAFLPDDCQLDA 211

Query: 224 HRTVAYIEKANRNFASKGRYAEFYDDPVQCFIRSDSNGDIKAVRTSKNTLYSKKAIIVAT 283
           HRTVAYIEK NRNFASKGRYAEFYDDPV+CFIRSD NG ++AV+TSKNTLYSKKA+IVA 
Sbjct: 212 HRTVAYIEKGNRNFASKGRYAEFYDDPVKCFIRSDCNGGVEAVQTSKNTLYSKKAVIVAA 271

Query: 284 GCWTGCLMEDLLRNWGVELHVPVRPRKGHLLEVQNFNFLQLNHGLMEAGYVDHPTISGLE 343
           GCWTG LM+DL RNWG+E HVPVRPRKGHLL +QNFN LQLNHGLMEAGYVDHP+IS LE
Sbjct: 272 GCWTGSLMQDLFRNWGMEFHVPVRPRKGHLLALQNFNSLQLNHGLMEAGYVDHPSISDLE 331

Query: 344 SSDHGRNFSVSMTATVDAAGNLLIGSSREFAGFNTDLDESVVSYIWKRVGEFFPKLKMLS 403
           SSDHGR+ SVSMTAT+DAAGNLL+GSSREFAGFNTDLDESV+++IWKRVG++FPKL+ LS
Sbjct: 332 SSDHGRDLSVSMTATIDAAGNLLVGSSREFAGFNTDLDESVITHIWKRVGDYFPKLRSLS 391

Query: 404 LSDLSADRKVRVGLRPYMPDGKPMIGPVPGLSNVYLAAGHEGGGLSMALGTAEMVVDMVL 463
           +SDLS  RKVR+GLRPYMPDGKP+IGPV GLSNVYLAAGHEGGGLSMALGTAEMVVD+VL
Sbjct: 392 VSDLSTSRKVRIGLRPYMPDGKPVIGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVDVVL 451

Query: 464 GCLGKVDSAPFAVDRVL 480
           G  GKVDSAPFAVDRVL
Sbjct: 452 GRPGKVDSAPFAVDRVL 468


>Medtr7g051240.2 | FAD-dependent oxidoreductase | HC |
           chr7:17945735-17939463 | 20130731
          Length = 365

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/364 (83%), Positives = 337/364 (92%)

Query: 117 MTHKTPGSDIWDLTWRSHQLWKMLAGSLEEQGLDPTLELGWKKTGSLLVGRTHAESDMLK 176
           MTHKTPGS  WDL+ RSHQLW M+A +L+EQGLDP +ELGWKKTGSLLVGRT AESDMLK
Sbjct: 1   MTHKTPGSATWDLSMRSHQLWTMMAENLQEQGLDPIVELGWKKTGSLLVGRTRAESDMLK 60

Query: 177 GRVKQLSAAGLKAEYLCTSDLFKQEPDLLVEKDSAAAFLPDDCQLDAHRTVAYIEKANRN 236
           GRVKQLS AGLKAE+L +SDL K+EPDLLV+KD+AAAFLPDDCQLDAHRTVAYIEK NRN
Sbjct: 61  GRVKQLSEAGLKAEFLGSSDLLKREPDLLVDKDTAAAFLPDDCQLDAHRTVAYIEKGNRN 120

Query: 237 FASKGRYAEFYDDPVQCFIRSDSNGDIKAVRTSKNTLYSKKAIIVATGCWTGCLMEDLLR 296
           FASKGRYAEFYDDPV+CFIRSD NG ++AV+TSKNTLYSKKA+IVA GCWTG LM+DL R
Sbjct: 121 FASKGRYAEFYDDPVKCFIRSDCNGGVEAVQTSKNTLYSKKAVIVAAGCWTGSLMQDLFR 180

Query: 297 NWGVELHVPVRPRKGHLLEVQNFNFLQLNHGLMEAGYVDHPTISGLESSDHGRNFSVSMT 356
           NWG+E HVPVRPRKGHLL +QNFN LQLNHGLMEAGYVDHP+IS LESSDHGR+ SVSMT
Sbjct: 181 NWGMEFHVPVRPRKGHLLALQNFNSLQLNHGLMEAGYVDHPSISDLESSDHGRDLSVSMT 240

Query: 357 ATVDAAGNLLIGSSREFAGFNTDLDESVVSYIWKRVGEFFPKLKMLSLSDLSADRKVRVG 416
           AT+DAAGNLL+GSSREFAGFNTDLDESV+++IWKRVG++FPKL+ LS+SDLS  RKVR+G
Sbjct: 241 ATIDAAGNLLVGSSREFAGFNTDLDESVITHIWKRVGDYFPKLRSLSVSDLSTSRKVRIG 300

Query: 417 LRPYMPDGKPMIGPVPGLSNVYLAAGHEGGGLSMALGTAEMVVDMVLGCLGKVDSAPFAV 476
           LRPYMPDGKP+IGPV GLSNVYLAAGHEGGGLSMALGTAEMVVD+VLG  GKVDSAPFAV
Sbjct: 301 LRPYMPDGKPVIGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVDVVLGRPGKVDSAPFAV 360

Query: 477 DRVL 480
           DRVL
Sbjct: 361 DRVL 364


>Medtr7g051240.3 | FAD-dependent oxidoreductase | HC |
           chr7:17943393-17939463 | 20130731
          Length = 365

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/364 (83%), Positives = 337/364 (92%)

Query: 117 MTHKTPGSDIWDLTWRSHQLWKMLAGSLEEQGLDPTLELGWKKTGSLLVGRTHAESDMLK 176
           MTHKTPGS  WDL+ RSHQLW M+A +L+EQGLDP +ELGWKKTGSLLVGRT AESDMLK
Sbjct: 1   MTHKTPGSATWDLSMRSHQLWTMMAENLQEQGLDPIVELGWKKTGSLLVGRTRAESDMLK 60

Query: 177 GRVKQLSAAGLKAEYLCTSDLFKQEPDLLVEKDSAAAFLPDDCQLDAHRTVAYIEKANRN 236
           GRVKQLS AGLKAE+L +SDL K+EPDLLV+KD+AAAFLPDDCQLDAHRTVAYIEK NRN
Sbjct: 61  GRVKQLSEAGLKAEFLGSSDLLKREPDLLVDKDTAAAFLPDDCQLDAHRTVAYIEKGNRN 120

Query: 237 FASKGRYAEFYDDPVQCFIRSDSNGDIKAVRTSKNTLYSKKAIIVATGCWTGCLMEDLLR 296
           FASKGRYAEFYDDPV+CFIRSD NG ++AV+TSKNTLYSKKA+IVA GCWTG LM+DL R
Sbjct: 121 FASKGRYAEFYDDPVKCFIRSDCNGGVEAVQTSKNTLYSKKAVIVAAGCWTGSLMQDLFR 180

Query: 297 NWGVELHVPVRPRKGHLLEVQNFNFLQLNHGLMEAGYVDHPTISGLESSDHGRNFSVSMT 356
           NWG+E HVPVRPRKGHLL +QNFN LQLNHGLMEAGYVDHP+IS LESSDHGR+ SVSMT
Sbjct: 181 NWGMEFHVPVRPRKGHLLALQNFNSLQLNHGLMEAGYVDHPSISDLESSDHGRDLSVSMT 240

Query: 357 ATVDAAGNLLIGSSREFAGFNTDLDESVVSYIWKRVGEFFPKLKMLSLSDLSADRKVRVG 416
           AT+DAAGNLL+GSSREFAGFNTDLDESV+++IWKRVG++FPKL+ LS+SDLS  RKVR+G
Sbjct: 241 ATIDAAGNLLVGSSREFAGFNTDLDESVITHIWKRVGDYFPKLRSLSVSDLSTSRKVRIG 300

Query: 417 LRPYMPDGKPMIGPVPGLSNVYLAAGHEGGGLSMALGTAEMVVDMVLGCLGKVDSAPFAV 476
           LRPYMPDGKP+IGPV GLSNVYLAAGHEGGGLSMALGTAEMVVD+VLG  GKVDSAPFAV
Sbjct: 301 LRPYMPDGKPVIGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVDVVLGRPGKVDSAPFAV 360

Query: 477 DRVL 480
           DRVL
Sbjct: 361 DRVL 364