Miyakogusa Predicted Gene

Lj1g3v3592790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3592790.1 Non Characterized Hit- tr|B9T5H6|B9T5H6_RICCO 60S
ribosomal protein L32, putative OS=Ricinus
communi,91.73,0,Ribosomal_L32e,Ribosomal protein L32e;
Q45NI6_MEDSA_Q45NI6;,Ribosomal protein L32e; 60S RIBOSOMAL
PR,CUFF.30929.1
         (133 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g053180.1 | 60S ribosomal protein L32-1 | HC | chr7:187037...   237   3e-63
Medtr7g053180.2 | 60S ribosomal protein L32-1 | HC | chr7:187036...   237   3e-63
Medtr7g007920.1 | 60S ribosomal protein L32-1 | HC | chr7:175590...   232   7e-62
Medtr8g085740.1 | 60S ribosomal protein L32-1 | HC | chr8:355445...   229   6e-61

>Medtr7g053180.1 | 60S ribosomal protein L32-1 | HC |
           chr7:18703774-18705909 | 20130731
          Length = 133

 Score =  237 bits (604), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/133 (87%), Positives = 117/133 (87%)

Query: 1   MAVPLLTXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 60
           MAVPLLT             PQSDRKICVK SWRRPKGIDSRVRRKFKG  LMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV+DLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 133
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>Medtr7g053180.2 | 60S ribosomal protein L32-1 | HC |
           chr7:18703682-18705988 | 20130731
          Length = 133

 Score =  237 bits (604), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/133 (87%), Positives = 117/133 (87%)

Query: 1   MAVPLLTXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 60
           MAVPLLT             PQSDRKICVK SWRRPKGIDSRVRRKFKG  LMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV+DLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 133
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>Medtr7g007920.1 | 60S ribosomal protein L32-1 | HC |
           chr7:1755900-1755424 | 20130731
          Length = 133

 Score =  232 bits (592), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 114/133 (85%), Positives = 116/133 (87%)

Query: 1   MAVPLLTXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 60
           MAVPLLT             PQSDRKICVK SWRRPKGIDS+VRRKFKG  LMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSQVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV+DLE LMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQDLEPLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 133
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>Medtr8g085740.1 | 60S ribosomal protein L32-1 | HC |
           chr8:35544567-35546244 | 20130731
          Length = 133

 Score =  229 bits (584), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 112/133 (84%), Positives = 114/133 (85%)

Query: 1   MAVPLLTXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGS 60
           MAVPLLT             PQSDRKICVK +WRRPKGIDSRVRRKFKGC LMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKHFKRPQSDRKICVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVV NV DLELLMMHNRTYCAEIAHNVST KRKDIVERAAQLDVV+
Sbjct: 61  DKKTRHYLPNGFKKFVVCNVNDLELLMMHNRTYCAEIAHNVSTSKRKDIVERAAQLDVVL 120

Query: 121 TNKLARLRSQEDE 133
           TNK ARLRSQEDE
Sbjct: 121 TNKTARLRSQEDE 133