Miyakogusa Predicted Gene

Lj1g3v3580650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3580650.1 CUFF.30962.1
         (218 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g053450.1 | 40S ribosomal S8-like protein | HC | chr7:1883...   335   2e-92
Medtr8g012325.1 | 40S ribosomal S8-like protein | HC | chr8:3483...   329   1e-90
Medtr8g012330.1 | 40S ribosomal protein S8 | HC | chr8:3492382-3...   308   3e-84
Medtr4g016670.1 | 40S ribosomal S8-like protein | HC | chr4:5110...   287   4e-78
Medtr4g016663.1 | ribosomal protein S8e family protein | HC | ch...   100   2e-21
Medtr4g016620.1 | 40S ribosomal protein S8, putative | LC | chr4...    80   2e-15
Medtr4g016610.1 | disease resistance protein (TIR-NBS-LRR class)...    61   1e-09

>Medtr7g053450.1 | 40S ribosomal S8-like protein | HC |
           chr7:18838026-18834797 | 20130731
          Length = 217

 Score =  335 bits (858), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 164/205 (80%), Positives = 170/205 (82%)

Query: 1   MGISRDSMHKRRATGGXXXXXXXXXXYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALR 60
           MGISRDSMHKRRATGG          YELGRQ ANTKLSSNKT+RRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKSWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSETVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNFSWGSE VTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRXXXXXXXXXXXXXXXXXXXDGKKSNHVQRKLENRQKDRTLDAHIEEQFSGGRLLAC 180
           ++GR                   + KKS+HVQRKLE RQKDR LD+HIEEQF GGRLLAC
Sbjct: 121 EVGRKKKTAAKKDSAEEAEVVAEEVKKSSHVQRKLEQRQKDRQLDSHIEEQFGGGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYM 205
           ISSRPGQCGRADGYILEGKELEFYM
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYM 205


>Medtr8g012325.1 | 40S ribosomal S8-like protein | HC |
           chr8:3483112-3480458 | 20130731
          Length = 215

 Score =  329 bits (843), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 165/205 (80%), Positives = 167/205 (81%), Gaps = 2/205 (0%)

Query: 1   MGISRDSMHKRRATGGXXXXXXXXXXYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALR 60
           MGISRDSMHKRR TGG          YELGRQ ANTKLSSNKT+RRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSETVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNFSWGSE VTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRXXXXXXXXXXXXXXXXXXXDGKKSNHVQRKLENRQKDRTLDAHIEEQFSGGRLLAC 180
           DIGR                     KKS HVQRKLE RQK+R LDAHIEEQF GGRLLAC
Sbjct: 121 DIGRKKKNVSKKEEEAEAATEEV--KKSAHVQRKLEQRQKERQLDAHIEEQFGGGRLLAC 178

Query: 181 ISSRPGQCGRADGYILEGKELEFYM 205
           ISSRPGQCGRADGYILEGKELEFYM
Sbjct: 179 ISSRPGQCGRADGYILEGKELEFYM 203


>Medtr8g012330.1 | 40S ribosomal protein S8 | HC |
           chr8:3492382-3487078 | 20130731
          Length = 288

 Score =  308 bits (788), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 154/203 (75%), Positives = 161/203 (79%)

Query: 3   ISRDSMHKRRATGGXXXXXXXXXXYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALRLD 62
           ISRDS  KR ATGG          YELGRQ ANTKLSSNKT+R IRVRGGN+K RALRLD
Sbjct: 74  ISRDSRDKRLATGGKRKTCIKKRKYELGRQPANTKLSSNKTVRSIRVRGGNLKCRALRLD 133

Query: 63  TGNFSWGSETVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 122
           TGN SWGSE VTRK+RLL+VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+I
Sbjct: 134 TGNISWGSEAVTRKSRLLNVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEI 193

Query: 123 GRXXXXXXXXXXXXXXXXXXXDGKKSNHVQRKLENRQKDRTLDAHIEEQFSGGRLLACIS 182
           G                    + KKSNHV RKLENR+KDR LDAHIEEQF GGRLLACIS
Sbjct: 194 GNKKKTAAKQDSAKEAEAATEETKKSNHVLRKLENREKDRQLDAHIEEQFGGGRLLACIS 253

Query: 183 SRPGQCGRADGYILEGKELEFYM 205
           SRPGQCGRADGYILEGKELEFYM
Sbjct: 254 SRPGQCGRADGYILEGKELEFYM 276


>Medtr4g016670.1 | 40S ribosomal S8-like protein | HC |
           chr4:5110790-5107818 | 20130731
          Length = 218

 Score =  287 bits (735), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 142/179 (79%), Positives = 147/179 (82%)

Query: 27  YELGRQAANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNFSWGSETVTRKTRLLDVVYNA 86
           YELGRQ ANTKLSSNKT+R IRVRGGNVK RALRLDTGN SWGSE VTRKTRLL+VVYNA
Sbjct: 27  YELGRQPANTKLSSNKTLRTIRVRGGNVKCRALRLDTGNCSWGSEAVTRKTRLLNVVYNA 86

Query: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXDGK 146
           SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IG                    + K
Sbjct: 87  SNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGSAKKTSGKKDSAEESEAVTEEVK 146

Query: 147 KSNHVQRKLENRQKDRTLDAHIEEQFSGGRLLACISSRPGQCGRADGYILEGKELEFYM 205
           KSN+VQRKLE RQKDR LD  IE QF GGRLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 147 KSNNVQRKLEQRQKDRRLDPLIEVQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 205


>Medtr4g016663.1 | ribosomal protein S8e family protein | HC |
           chr4:5104622-5104277 | 20130731
          Length = 87

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/61 (80%), Positives = 51/61 (83%), Gaps = 1/61 (1%)

Query: 146 KKSNHVQRKLENRQKDRTLDAH-IEEQFSGGRLLACISSRPGQCGRADGYILEGKELEFY 204
           K SN+VQRKLE RQKD  LD   IEEQ  GGRLLACISSRPGQCG ADGYIL+GKELEFY
Sbjct: 15  KNSNNVQRKLEQRQKDNRLDIPVIEEQLGGGRLLACISSRPGQCGTADGYILKGKELEFY 74

Query: 205 M 205
           M
Sbjct: 75  M 75


>Medtr4g016620.1 | 40S ribosomal protein S8, putative | LC |
           chr4:5095432-5094540 | 20130731
          Length = 99

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/48 (79%), Positives = 40/48 (83%)

Query: 146 KKSNHVQRKLENRQKDRTLDAHIEEQFSGGRLLACISSRPGQCGRADG 193
           KKSN VQRKLE RQKDR LD  IE QF+GGRLLACISS+PG CGRA G
Sbjct: 31  KKSNKVQRKLEQRQKDRRLDTLIEAQFAGGRLLACISSQPGLCGRAMG 78


>Medtr4g016610.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | LC | chr4:5091321-5086107 | 20130731
          Length = 1114

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/60 (55%), Positives = 35/60 (58%), Gaps = 16/60 (26%)

Query: 146  KKSNHVQRKLENRQKDRTLDAHIEEQFSGGRLLACISSRPGQCGRADGYILEGKELEFYM 205
            KKSN VQRKLE R+KD  LD  IEEQF GGR                 YILEGKELE Y+
Sbjct: 1054 KKSNSVQRKLEQRKKDLQLDTLIEEQFGGGRF----------------YILEGKELELYV 1097