Miyakogusa Predicted Gene

Lj1g3v3580580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3580580.1 tr|D7L5W0|D7L5W0_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899120
PE,32.54,0.000000000005,seg,NULL,CUFF.30903.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g053580.1 | hypothetical protein | HC | chr7:18894681-1889...   107   4e-24

>Medtr7g053580.1 | hypothetical protein | HC |
           chr7:18894681-18895195 | 20130731
          Length = 74

 Score =  107 bits (267), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 61/67 (91%)

Query: 83  LKESITGSVSATGSVAGELAEKFKTTLEESLNQVPELFEELSDMISNMVTELWNNYKGAL 142
           +K++ITGSVSATGS+A ELAEK K++ EESL QVPELFEE+ +M+SNMVTE+WNNYK A+
Sbjct: 8   VKDTITGSVSATGSIAAELAEKLKSSFEESLKQVPELFEEVLEMMSNMVTEVWNNYKEAV 67

Query: 143 GYVTENA 149
           GYVTENA
Sbjct: 68  GYVTENA 74