Miyakogusa Predicted Gene

Lj1g3v3580540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3580540.1 Non Characterized Hit- tr|D8RJ88|D8RJ88_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.73,0.00000000003,Tetrahydrobiopterin biosynthesis
enzymes-like,NULL; GTP_cyclohydroI,GTP cyclohydrolase I/Nitrile
oxi,CUFF.30896.1
         (325 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g055700.1 | GTP cyclohydrolase I 1 | HC | chr7:19097839-19...   512   e-145
Medtr8g012570.1 | GTP cyclohydrolase I 1 | HC | chr8:3639155-363...   475   e-134
Medtr8g016030.1 | GTP cyclohydrolase I 1 | HC | chr8:5321655-531...   401   e-112
Medtr7g055700.2 | GTP cyclohydrolase I 1 | HC | chr7:19098502-19...   330   1e-90
Medtr7g060730.1 | GTP cyclohydrolase I | HC | chr7:21960469-2196...   150   2e-36
Medtr7g060740.1 | GTP cyclohydrolase I, putative | HC | chr7:219...   144   1e-34

>Medtr7g055700.1 | GTP cyclohydrolase I 1 | HC |
           chr7:19097839-19101971 | 20130731
          Length = 456

 Score =  512 bits (1319), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 251/318 (78%), Positives = 273/318 (85%), Gaps = 10/318 (3%)

Query: 1   MGCLDDGSFTVKLENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPL 60
           MGCLDDG F V+LENG  NG          + + IEDAVKVLL+GLGEDINREG+RKTPL
Sbjct: 1   MGCLDDGRFNVELENGKNNG---------KDGSAIEDAVKVLLMGLGEDINREGIRKTPL 51

Query: 61  RVAKALREGTRGYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCL 120
           RVAKALR+GTRGY+ KVKDIV+GALFPEAGLDN VGHAGGAGGLVIVRD+DLFSYCESC+
Sbjct: 52  RVAKALRDGTRGYRQKVKDIVEGALFPEAGLDNRVGHAGGAGGLVIVRDIDLFSYCESCM 111

Query: 121 LPFQVKCHVGYVPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVAI 180
           LPFQVKCHVGYVPS  RVVGLSKLSRVA+VFAKRLQEPQRLA+EVCSALH GIKP GVAI
Sbjct: 112 LPFQVKCHVGYVPSSERVVGLSKLSRVADVFAKRLQEPQRLANEVCSALHHGIKPDGVAI 171

Query: 181 ILQCTHIHFPDIESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVEN 240
           ILQCTHIHFPD+ES FLDSN+QG VKILVS+GSGVFENKN D WADFFSLLKFRGI++E 
Sbjct: 172 ILQCTHIHFPDVESVFLDSNHQGLVKILVSAGSGVFENKNADEWADFFSLLKFRGISMEK 231

Query: 241 FHFRGPSDPCWCPSESSLSAKSKIQPANPVMVSAIASIIKYLGEDPLRKELTGTPRRFVK 300
            +FRG SD  WC S+S+    SK+ P NP MV+A ASIIK LGEDPLRKEL GTP RFVK
Sbjct: 232 INFRGSSDMSWCSSQSA-KISSKVGPVNPAMVTAAASIIKSLGEDPLRKELRGTPTRFVK 290

Query: 301 WLMNFQNSNLDMKLNGFL 318
           WLMNFQN N DMKLNGFL
Sbjct: 291 WLMNFQNCNFDMKLNGFL 308



 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)

Query: 32  NATIEDAVKVLLLGLGEDINREGLRKTPLRVAKALREGTR-GYKLKVKDIVQGALFPEAG 90
           N  +  A   ++  LGED  R+ LR TP R  K L       + +K+   + G +   A 
Sbjct: 258 NPAMVTAAASIIKSLGEDPLRKELRGTPTRFVKWLMNFQNCNFDMKLNGFLNGGI---AS 314

Query: 91  LDNSVGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGG-RVVGLSKLSRVAE 149
           LD +         +    +L  +S CE  LLPF    H+GY+ S G   +G S L  +  
Sbjct: 315 LDTNKEVELNDKKICSELNLAFWSQCEHHLLPFHGVVHIGYILSDGFSPIGKSLLQSIVH 374

Query: 150 VFAKRLQEPQRLADEVCSALHLGIKPAGVAIILQCTH 186
            +  +LQ  +RL  ++   +   I    V ++++ +H
Sbjct: 375 FYGFKLQVQERLTRQIAETISPLIG-GDVIVVVEASH 410


>Medtr8g012570.1 | GTP cyclohydrolase I 1 | HC |
           chr8:3639155-3635903 | 20130731
          Length = 465

 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/320 (72%), Positives = 268/320 (83%), Gaps = 3/320 (0%)

Query: 1   MGCLDDGSFTVKLENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPL 60
           MGC D+  +  +LENG +  F    VE+E N   IEDAVK+LLLGLGEDINREGLRKTP 
Sbjct: 1   MGCFDEVCYNGELENGVSL-FGCSEVEDEANTVAIEDAVKILLLGLGEDINREGLRKTPH 59

Query: 61  RVAKALREGTRGYKLKVKDIVQGALFPEAGLDNS-VGHAGGAGGLVIVRDLDLFSYCESC 119
           RVAKALREGTRGY+ KVKDIV+GALFPEAG+DN+ +GHAGGAGGLVIVRD+DL+SYCESC
Sbjct: 60  RVAKALREGTRGYRQKVKDIVEGALFPEAGIDNNKIGHAGGAGGLVIVRDIDLYSYCESC 119

Query: 120 LLPFQVKCHVGYVPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVA 179
           LLPFQVKCHVGYVPSG RVVGLSKLSRVAEVFAKRLQEPQRLADEVCSAL  GI+PAGVA
Sbjct: 120 LLPFQVKCHVGYVPSGQRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALQQGIQPAGVA 179

Query: 180 IILQCTHIHFPDIESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVE 239
           ++LQCTHIHFPDIE+ FL+S+ +G  KI VSSGSGVFENKN DVWADFF L+K RGI++E
Sbjct: 180 VVLQCTHIHFPDIETIFLESSLKGGAKIHVSSGSGVFENKNADVWADFFYLIKSRGIDME 239

Query: 240 NFHFRGPSDPCWCPSESSLSAKSKIQPANPVMVSAIASIIKYLGEDPLRKELTGTPRRFV 299
           N H +G  D CWCPS S+    SK    NP MV+A+ SI+K LGED +RKEL GTP RFV
Sbjct: 240 NIHAQGLPDQCWCPSLST-KVSSKTGSINPAMVTAVFSILKSLGEDSVRKELAGTPNRFV 298

Query: 300 KWLMNFQNSNLDMKLNGFLC 319
           KWL+NFQ+ ++D+KLNG +C
Sbjct: 299 KWLLNFQSIDMDVKLNGSVC 318


>Medtr8g016030.1 | GTP cyclohydrolase I 1 | HC |
           chr8:5321655-5317848 | 20130731
          Length = 455

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/302 (68%), Positives = 247/302 (81%), Gaps = 12/302 (3%)

Query: 23  ELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPLRVAKALREGTRGYKLKVKDIVQ 82
           E+S ++E N + IE AVK LLLGLGEDINREG+RKTP RVAKA  EGTRGY+  VKDI++
Sbjct: 21  EVSFKKEVNRSAIECAVKDLLLGLGEDINREGIRKTPFRVAKAFFEGTRGYRQNVKDIIE 80

Query: 83  GALFPEAGLDNS--VGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGGRVVG 140
           GALFPE GLDN+  +GH GG GGLVIVRD+DL+SYCESCLLPFQVKCHVGY+PSG RVVG
Sbjct: 81  GALFPEDGLDNNNKIGHGGGVGGLVIVRDIDLYSYCESCLLPFQVKCHVGYIPSGQRVVG 140

Query: 141 LSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVAIILQCTHIHFP--DIESAFLD 198
           LSKL RVAE FAKRLQEPQRLADE+CSALH GI+P GVAI+LQCTHI FP  DIE     
Sbjct: 141 LSKLPRVAEAFAKRLQEPQRLADEICSALHQGIEPEGVAIVLQCTHIPFPYKDIE----- 195

Query: 199 SNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVENFHFRGPSDPCWCPSESSL 258
           SN  GWVK+LVSSGSGV+ENKN ++W+DFFSLLKFRGI+ +    +GP D CWCPS  + 
Sbjct: 196 SNDIGWVKLLVSSGSGVYENKNAEMWSDFFSLLKFRGIDNDKVRLKGPLDQCWCPSLYA- 254

Query: 259 SAKSKIQP-ANPVMVSAIASIIKYLGEDPLRKELTGTPRRFVKWLMNFQ-NSNLDMKLNG 316
              SKI+  + P+MV+A++SI+K LGEDP RKEL  TP RF+KWLMNFQ  SN+D+++NG
Sbjct: 255 EVSSKIKAISTPIMVNAVSSIVKSLGEDPTRKELVETPSRFLKWLMNFQCASNIDIEMNG 314

Query: 317 FL 318
           ++
Sbjct: 315 YI 316


>Medtr7g055700.2 | GTP cyclohydrolase I 1 | HC |
           chr7:19098502-19101971 | 20130731
          Length = 346

 Score =  330 bits (845), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 159/199 (79%), Positives = 172/199 (86%), Gaps = 1/199 (0%)

Query: 120 LLPFQVKCHVGYVPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVA 179
           +LPFQVKCHVGYVPS  RVVGLSKLSRVA+VFAKRLQEPQRLA+EVCSALH GIKP GVA
Sbjct: 1   MLPFQVKCHVGYVPSSERVVGLSKLSRVADVFAKRLQEPQRLANEVCSALHHGIKPDGVA 60

Query: 180 IILQCTHIHFPDIESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVE 239
           IILQCTHIHFPD+ES FLDSN+QG VKILVS+GSGVFENKN D WADFFSLLKFRGI++E
Sbjct: 61  IILQCTHIHFPDVESVFLDSNHQGLVKILVSAGSGVFENKNADEWADFFSLLKFRGISME 120

Query: 240 NFHFRGPSDPCWCPSESSLSAKSKIQPANPVMVSAIASIIKYLGEDPLRKELTGTPRRFV 299
             +FRG SD  WC S+S+    SK+ P NP MV+A ASIIK LGEDPLRKEL GTP RFV
Sbjct: 121 KINFRGSSDMSWCSSQSA-KISSKVGPVNPAMVTAAASIIKSLGEDPLRKELRGTPTRFV 179

Query: 300 KWLMNFQNSNLDMKLNGFL 318
           KWLMNFQN N DMKLNGFL
Sbjct: 180 KWLMNFQNCNFDMKLNGFL 198



 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)

Query: 32  NATIEDAVKVLLLGLGEDINREGLRKTPLRVAKALREGTR-GYKLKVKDIVQGALFPEAG 90
           N  +  A   ++  LGED  R+ LR TP R  K L       + +K+   + G +   A 
Sbjct: 148 NPAMVTAAASIIKSLGEDPLRKELRGTPTRFVKWLMNFQNCNFDMKLNGFLNGGI---AS 204

Query: 91  LDNSVGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGG-RVVGLSKLSRVAE 149
           LD +         +    +L  +S CE  LLPF    H+GY+ S G   +G S L  +  
Sbjct: 205 LDTNKEVELNDKKICSELNLAFWSQCEHHLLPFHGVVHIGYILSDGFSPIGKSLLQSIVH 264

Query: 150 VFAKRLQEPQRLADEVCSALHLGIKPAGVAIILQCTH 186
            +  +LQ  +RL  ++   +   I    V ++++ +H
Sbjct: 265 FYGFKLQVQERLTRQIAETISPLIG-GDVIVVVEASH 300


>Medtr7g060730.1 | GTP cyclohydrolase I | HC |
           chr7:21960469-21961238 | 20130731
          Length = 108

 Score =  150 bits (378), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/82 (84%), Positives = 75/82 (91%)

Query: 72  GYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGY 131
           GY+ KVKDIVQGALFPEA LDN VGHAGGAGGLVI RDLDLFSYC+SC+LPFQVKCHVGY
Sbjct: 27  GYRQKVKDIVQGALFPEAVLDNRVGHAGGAGGLVIARDLDLFSYCKSCVLPFQVKCHVGY 86

Query: 132 VPSGGRVVGLSKLSRVAEVFAK 153
           VPSG RV+GLSKLSRV ++ AK
Sbjct: 87  VPSGERVIGLSKLSRVVDISAK 108


>Medtr7g060740.1 | GTP cyclohydrolase I, putative | HC |
           chr7:21961325-21961722 | 20130731
          Length = 118

 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/128 (58%), Positives = 89/128 (69%), Gaps = 19/128 (14%)

Query: 186 HIHFPDIESAFLDSNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVENFHFRG 245
           +IHFPDIES FLDSN+QG VKIL+S+GSGVFENK     ADFFSLLKFRGI+VE  ++RG
Sbjct: 3   NIHFPDIESVFLDSNHQGLVKILISAGSGVFENKR----ADFFSLLKFRGISVEKINYRG 58

Query: 246 PSDPCWCPSESSLSAKSKIQPANPVMVSAIASIIKYLGEDPLRKELTGTPRRFVKWLMNF 305
            +D  WCPS+S+    S+I+  NP MV+A+              EL GT  RFVKWLMNF
Sbjct: 59  LTDSNWCPSQSA-KVSSEIELVNPAMVTAV--------------ELRGTLTRFVKWLMNF 103

Query: 306 QNSNLDMK 313
           Q SN D K
Sbjct: 104 QTSNFDTK 111