Miyakogusa Predicted Gene

Lj1g3v3580320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3580320.1 Non Characterized Hit- tr|I3T4U0|I3T4U0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,60,4e-19,seg,NULL,NODE_59626_length_490_cov_22.089796.path1.1
         (89 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g063490.1 | legume-specific protein | HC | chr7:23157059-2...    96   1e-20
Medtr4g021330.1 | legume-specific protein | HC | chr4:6913138-69...    62   1e-10

>Medtr7g063490.1 | legume-specific protein | HC |
          chr7:23157059-23157910 | 20130731
          Length = 86

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 55/90 (61%), Gaps = 5/90 (5%)

Query: 1  MEGLFPFVYKVIMKYKNDKEGPLGSWICEAPPYTYMTLPS-DSDRFQXXXXXXXXXXXXX 59
          MEGL P VYK IM+YK  KEG +GSWICE+P Y+YM LP+ DS RFQ             
Sbjct: 1  MEGLIPLVYKTIMQYKGGKEGAIGSWICESPSYSYMRLPAGDSGRFQ----IQTTSSSNH 56

Query: 60 XXXXXXXTHVIVSPGVQSPHQNLTHRRIAA 89
                   +IVS GVQSPH  LTHRRIAA
Sbjct: 57 VSSSTSSAQIIVSSGVQSPHNCLTHRRIAA 86


>Medtr4g021330.1 | legume-specific protein | HC |
          chr4:6913138-6914055 | 20130731
          Length = 90

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 7/92 (7%)

Query: 1  MEGLFPFVYKVIMKYKNDKE-GPLGSWICEAPPYTYMTLPS-DSDRFQXXXXXXXXXXXX 58
          MEGL PFVYK I++YKN K+   + SW C++P Y+YM L + DS RFQ            
Sbjct: 1  MEGLIPFVYKAIVQYKNGKQRSNISSWFCDSPSYSYMKLSAGDSGRFQ---NFDASSSSP 57

Query: 59 XXXXXXXXTHVIVSPG--VQSPHQNLTHRRIA 88
                  T ++ S G  V+SP + L   R++
Sbjct: 58 SSNSTNSRTQIVASSGGDVRSPRRRLNSHRVS 89