Miyakogusa Predicted Gene

Lj1g3v3560250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3560250.1 Non Characterized Hit- tr|B9TDS4|B9TDS4_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,65.82,4e-18,DNA-binding domain,DNA-binding, integrase-type;
DNA-binding domain in plant proteins such as,AP2/ERF,CUFF.30874.1
         (233 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g055857.1 | ethylene response factor | HC | chr7:19252386-...   286   2e-77
Medtr7g055857.2 | ethylene response factor | HC | chr7:19252386-...   286   2e-77
Medtr8g012655.2 | ethylene response factor | HC | chr8:3722232-3...   220   8e-58
Medtr8g012655.1 | ethylene response factor | HC | chr8:3721647-3...   220   8e-58

>Medtr7g055857.1 | ethylene response factor | HC |
           chr7:19252386-19257484 | 20130731
          Length = 224

 Score =  286 bits (731), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/208 (71%), Positives = 159/208 (76%), Gaps = 11/208 (5%)

Query: 19  FVTPLPLYCENLTGSENSNWHAKPKSEQPVLSDDASILDSNTIVQEEPXXXXXXXXXXXK 78
           FV PLPLYCENLTGSEN +WHAKPKSEQP+LSDDASI DSNT+VQEEP           K
Sbjct: 19  FVNPLPLYCENLTGSENLSWHAKPKSEQPMLSDDASIPDSNTVVQEEPGSSNISGSSSSK 78

Query: 79  EQLMQQTPAGPPVXXXXXXXXXNLHNQETCLMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 138
           E L+Q T  GP V         NLH+QE   MRGVYFKNMKWQAAIKVDKKQIHLGTVGS
Sbjct: 79  ELLIQST-VGPAVKRRKRHRRKNLHSQEVS-MRGVYFKNMKWQAAIKVDKKQIHLGTVGS 136

Query: 139 QEEAAHLYDRAAFMCGREPNFELPEEEKRELHKFKWDEFLAVTRQAITRKKHKRRLSPGP 198
           QEEAAHLYDRAAFMCGREPNF+LPEEEK+EL KFKWD+FLA+TRQAITRKK KR +SP  
Sbjct: 137 QEEAAHLYDRAAFMCGREPNFDLPEEEKQELRKFKWDDFLAMTRQAITRKKLKRMISP-E 195

Query: 199 LDNGLELLPLQKDDWESKQGVSGFSACE 226
           L N          DWESKQGVSGFS  E
Sbjct: 196 LPNSF--------DWESKQGVSGFSPYE 215


>Medtr7g055857.2 | ethylene response factor | HC |
           chr7:19252386-19257484 | 20130731
          Length = 224

 Score =  286 bits (731), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/208 (71%), Positives = 159/208 (76%), Gaps = 11/208 (5%)

Query: 19  FVTPLPLYCENLTGSENSNWHAKPKSEQPVLSDDASILDSNTIVQEEPXXXXXXXXXXXK 78
           FV PLPLYCENLTGSEN +WHAKPKSEQP+LSDDASI DSNT+VQEEP           K
Sbjct: 19  FVNPLPLYCENLTGSENLSWHAKPKSEQPMLSDDASIPDSNTVVQEEPGSSNISGSSSSK 78

Query: 79  EQLMQQTPAGPPVXXXXXXXXXNLHNQETCLMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 138
           E L+Q T  GP V         NLH+QE   MRGVYFKNMKWQAAIKVDKKQIHLGTVGS
Sbjct: 79  ELLIQST-VGPAVKRRKRHRRKNLHSQEVS-MRGVYFKNMKWQAAIKVDKKQIHLGTVGS 136

Query: 139 QEEAAHLYDRAAFMCGREPNFELPEEEKRELHKFKWDEFLAVTRQAITRKKHKRRLSPGP 198
           QEEAAHLYDRAAFMCGREPNF+LPEEEK+EL KFKWD+FLA+TRQAITRKK KR +SP  
Sbjct: 137 QEEAAHLYDRAAFMCGREPNFDLPEEEKQELRKFKWDDFLAMTRQAITRKKLKRMISP-E 195

Query: 199 LDNGLELLPLQKDDWESKQGVSGFSACE 226
           L N          DWESKQGVSGFS  E
Sbjct: 196 LPNSF--------DWESKQGVSGFSPYE 215


>Medtr8g012655.2 | ethylene response factor | HC |
           chr8:3722232-3726436 | 20130731
          Length = 243

 Score =  220 bits (561), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/225 (58%), Positives = 152/225 (67%), Gaps = 14/225 (6%)

Query: 19  FVTPLPLYCENLTGSENSNWHAKPKSEQPVLSDDASILDS-------NTIVQEEPXXXXX 71
           FVTPLPLYCENL   E S+ +A PKSEQ ++ D  S+ DS       NT V++E      
Sbjct: 19  FVTPLPLYCENLARYEISSQNANPKSEQSMVLDITSVRDSVGTQDSQNTAVKDESGSSDV 78

Query: 72  XXXXXXKEQLMQQTPAGPPVXXXXXXXXXNLHNQETCLMRGVYFKNMKWQAAIKVDKKQI 131
                 KEQ  QQ+  GPPV            NQE C+MRGVYFKNMKWQAAIKVDKKQI
Sbjct: 79  SGSNLSKEQPSQQS-IGPPVKRRKRHSRKPRENQEPCVMRGVYFKNMKWQAAIKVDKKQI 137

Query: 132 HLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKRELHKFKWDEFLAVTRQAITRKKHK 191
           HLGTV SQEEAA LYDRAAFMCGREPNFEL EEEK EL KFKW+EFLAVTRQ+IT KKHK
Sbjct: 138 HLGTVASQEEAARLYDRAAFMCGREPNFELSEEEKLELSKFKWEEFLAVTRQSITCKKHK 197

Query: 192 RRLSPGPLDNGLELLPLQKDDWESKQGVSGFSAC-----ETSISR 231
           +  SPGP+ N ++   + + D +SKQGV+ F        ET++SR
Sbjct: 198 KSHSPGPV-NMVDEPSIHRGDCDSKQGVTDFPVNGEPEQETTVSR 241


>Medtr8g012655.1 | ethylene response factor | HC |
           chr8:3721647-3726436 | 20130731
          Length = 243

 Score =  220 bits (561), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/225 (58%), Positives = 152/225 (67%), Gaps = 14/225 (6%)

Query: 19  FVTPLPLYCENLTGSENSNWHAKPKSEQPVLSDDASILDS-------NTIVQEEPXXXXX 71
           FVTPLPLYCENL   E S+ +A PKSEQ ++ D  S+ DS       NT V++E      
Sbjct: 19  FVTPLPLYCENLARYEISSQNANPKSEQSMVLDITSVRDSVGTQDSQNTAVKDESGSSDV 78

Query: 72  XXXXXXKEQLMQQTPAGPPVXXXXXXXXXNLHNQETCLMRGVYFKNMKWQAAIKVDKKQI 131
                 KEQ  QQ+  GPPV            NQE C+MRGVYFKNMKWQAAIKVDKKQI
Sbjct: 79  SGSNLSKEQPSQQS-IGPPVKRRKRHSRKPRENQEPCVMRGVYFKNMKWQAAIKVDKKQI 137

Query: 132 HLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKRELHKFKWDEFLAVTRQAITRKKHK 191
           HLGTV SQEEAA LYDRAAFMCGREPNFEL EEEK EL KFKW+EFLAVTRQ+IT KKHK
Sbjct: 138 HLGTVASQEEAARLYDRAAFMCGREPNFELSEEEKLELSKFKWEEFLAVTRQSITCKKHK 197

Query: 192 RRLSPGPLDNGLELLPLQKDDWESKQGVSGFSAC-----ETSISR 231
           +  SPGP+ N ++   + + D +SKQGV+ F        ET++SR
Sbjct: 198 KSHSPGPV-NMVDEPSIHRGDCDSKQGVTDFPVNGEPEQETTVSR 241