Miyakogusa Predicted Gene

Lj1g3v3557070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3557070.1 Non Characterized Hit- tr|I1N272|I1N272_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19825
PE,80.11,0,Acyl-ACP_TE,Acyl-ACP thioesterase; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; Thioesterase/thi,CUFF.30860.1
         (371 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g056233.1 | oleoyl-[acyl-carrier] hydrolase (acyl-ACP thio...   593   e-170
Medtr4g112970.1 | acyl-ACP-thioesterase B | HC | chr4:46401495-4...   257   1e-68
Medtr3g099020.1 | palmitoyl-acyl carrier thioesterase | HC | chr...   235   6e-62
Medtr1g109110.1 | palmitoyl-acyl carrier thioesterase | HC | chr...   205   7e-53

>Medtr7g056233.1 | oleoyl-[acyl-carrier] hydrolase (acyl-ACP
           thioesterase) | HC | chr7:19680783-19673229 | 20130731
          Length = 369

 Score =  593 bits (1530), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 298/377 (79%), Positives = 324/377 (85%), Gaps = 14/377 (3%)

Query: 1   MLKLSSCNGADRVQLLAQCGFAPHRPASVLAGRI---GFRTPATRVSPVLAVVSEKDGAV 57
           MLKL  CNG DRV L++QCGF   RP S   GR    GFR+  T+  PV AV S KDGAV
Sbjct: 1   MLKLP-CNGVDRVHLMSQCGFMG-RPTSFFTGRSSVKGFRS--TKAYPVQAVASAKDGAV 56

Query: 58  AVNRVGPESVSLADRLRLGSLTEDGLSYKEKFIVRSYEVGINKTATVETIANLLQEVGCN 117
            VNRV  +  SLA+RLRLGSL+EDGLSYKEKFIVRSYEVGINKTATVET+ANLLQEVGCN
Sbjct: 57  -VNRVEADIGSLANRLRLGSLSEDGLSYKEKFIVRSYEVGINKTATVETVANLLQEVGCN 115

Query: 118 HAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQGEGRAGTRR 177
           HAQ VGFSTDGFATTTTMRK HLIWVTARMHIE+YKYPAWSDVVEIETWCQ EGRAGTRR
Sbjct: 116 HAQIVGFSTDGFATTTTMRKYHLIWVTARMHIEVYKYPAWSDVVEIETWCQAEGRAGTRR 175

Query: 178 DFILKDPATDQVIGRATSKWVMMNEDTRRIQKVSDDVREEYLVFCPREPRLAIPEANSNS 237
           DFI+KD AT++VIGRATSKWVMMNEDTRR+QKVSDDVR+E+LV+CPRE RLAIPE NSN 
Sbjct: 176 DFIIKDYATNEVIGRATSKWVMMNEDTRRLQKVSDDVRDEFLVYCPRELRLAIPEENSNC 235

Query: 238 MKKIPKLEDPAQCSRLGLVPRRADLDMNKHVNNVTYIGWVLESMPQEIIDSHELRSITLD 297
           +KKIPKL DPA  SRLGL+PRR+DLDMN+HVNNV YIGWVLESMPQEIIDS+EL+SITLD
Sbjct: 236 LKKIPKLGDPAHNSRLGLMPRRSDLDMNQHVNNVAYIGWVLESMPQEIIDSYELQSITLD 295

Query: 298 YRRECQQSDIVDSLTSVELIEGSEVV---HGTNGSASAAIAQQDKQDRQQFLHLLRLSTE 354
           YRRECQQ+DIVDSLTSVE +EG+EVV     TNGS     A  DKQ+RQQFLHLLRLS E
Sbjct: 296 YRRECQQNDIVDSLTSVEALEGAEVVPELKSTNGSGK---AMDDKQERQQFLHLLRLSNE 352

Query: 355 GLEINRGRTEWRKKAPR 371
           GLEINRGRTEWRKKA R
Sbjct: 353 GLEINRGRTEWRKKAAR 369


>Medtr4g112970.1 | acyl-ACP-thioesterase B | HC |
           chr4:46401495-46404569 | 20130731
          Length = 414

 Score =  257 bits (656), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/302 (44%), Positives = 187/302 (61%), Gaps = 24/302 (7%)

Query: 69  LADRLRLGSLTEDGLSYKEKFIVRSYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDG 128
           L D   +G + +DGL + E F +RSYE+G ++TA+++TI N LQE   NH ++ G   DG
Sbjct: 119 LIDPFGIGKIVQDGLVFSENFSIRSYEIGADRTASIDTIMNHLQETALNHVKTAGLLGDG 178

Query: 129 FATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQGEGRAGTRRDFILKDPATDQ 188
           F +T  M K +LIWV ARM + + +YP W DVV +ETW    G+ G RRD++L+D  T +
Sbjct: 179 FGSTPEMCKKNLIWVVARMQVVVDRYPTWGDVVHVETWVSASGKNGMRRDWLLRDYNTGE 238

Query: 189 VIGRATSKWVMMNEDTRRIQKVSDDVREEY-LVFCPREPRLAIPEANSNSMKKIPKLEDP 247
           ++ RA+S WVMMN+ TR++ K+ ++VR E    F    P L   +      +K+ KL+D 
Sbjct: 239 ILTRASSVWVMMNKHTRKLSKIPEEVRGEIGSYFVESAPILEEDD------RKLAKLDDS 292

Query: 248 -AQCSRLGLVPRRADLDMNKHVNNVTYIGWVLESMPQEIIDSHELRSITLDYRRECQQSD 306
            A   R GL PR +DLD+N+HVNNV YIGW+LES PQ I++SHEL ++TL+YRREC +  
Sbjct: 293 TADYIRSGLSPRWSDLDVNQHVNNVKYIGWILESAPQSILESHELCAMTLEYRRECGKDS 352

Query: 307 IVDSLTSVELIEGSEVVHGTNGSASAAIAQQDKQDRQQFLHLLRLSTEGLEINRGRTEWR 366
           ++ SLTSV                 A +    +  R +  HLLRL  +G EI RGRT+WR
Sbjct: 353 VLQSLTSV---------------YDAGVGNLAQSGRIECQHLLRLE-DGAEIVRGRTKWR 396

Query: 367 KK 368
            K
Sbjct: 397 PK 398


>Medtr3g099020.1 | palmitoyl-acyl carrier thioesterase | HC |
           chr3:45381197-45384478 | 20130731
          Length = 387

 Score =  235 bits (599), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 118/294 (40%), Positives = 185/294 (62%), Gaps = 14/294 (4%)

Query: 76  GSLTEDGLSYKEKFIVRSYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTM 135
           G   E    +++ F++RSYE+G ++TAT+ET+ N LQE   NH  S G   DGF  T  M
Sbjct: 103 GRFVEGRFVFRQIFVIRSYEIGPDRTATMETLMNFLQETALNHVTSSGIGGDGFGATREM 162

Query: 136 RKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQGEGRAGTRRDFILKDPATDQVIGRATS 195
               LIWV  R+ +++ +Y  W + +EI+TW    G+ G RRD+I++D  T ++I +ATS
Sbjct: 163 SLRKLIWVVTRIQVQVQRYNKWGEEIEIDTWVDAAGKNGMRRDWIIRDRCTKEIITKATS 222

Query: 196 KWVMMNEDTRRIQKVSDDVREEYLVFCPREPRLAIPEANSNSMKKIPKL-EDPAQCSRLG 254
            WV+MN +TRR+ K+ ++VR+E   F   +  +A  E +    +KI KL +D A+  + G
Sbjct: 223 TWVIMNRETRRLSKIPEEVRKELTPFYLHKIAVASEERDC---EKIDKLTDDTAERIQSG 279

Query: 255 LVPRRADLDMNKHVNNVTYIGWVLESMPQEIIDSHELRSITLDYRRECQQSDIVDSLTSV 314
           L PR  D+D+N+HVNNV YIGW+LES+P ++++ + + S+TL++RREC QSD ++SLT  
Sbjct: 280 LAPRWNDMDVNQHVNNVKYIGWILESVPIKVLEDYNMTSLTLEFRRECTQSDTLESLTC- 338

Query: 315 ELIEGSEVVHGTNGSASAAIAQQDKQDRQQFLHLLRLSTEGLEINRGRTEWRKK 368
                +E V G + + S+     +++  QQ+ HLLRL  +  ++ R R+EW  K
Sbjct: 339 ----PTERVIGESDNNSS-----NRKPDQQYTHLLRLQDDQKDVVRARSEWNLK 383


>Medtr1g109110.1 | palmitoyl-acyl carrier thioesterase | HC |
           chr1:49299945-49302477 | 20130731
          Length = 378

 Score =  205 bits (521), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 173/323 (53%), Gaps = 40/323 (12%)

Query: 64  PESVSLADRLRLGSLTEDGLSYKEKFIVRSYEVGINKTATVETIANLLQEVGCNHAQSVG 123
           P    L D  R G + E G+ Y++  ++RSYE                 E   NH    G
Sbjct: 70  PTKKQLVDPHRQGLIVEGGVGYRQTVVIRSYE-----------------ETALNHVWMSG 112

Query: 124 FSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQGEGRAGTRRDFILKD 183
             +DGF  T  M +  LIWV +RM + I  YP W +V+EI+TW    G+ G RRD++++ 
Sbjct: 113 LLSDGFGATHGMMRNDLIWVVSRMQVLIDYYPIWGEVLEIDTWVGASGKNGMRRDWLIRS 172

Query: 184 PATDQVIGRATSKWVMMNEDTRRIQKVSDDVREEYLVFCPREPRLAIPEANSNSMKKIPK 243
            AT  +  RATS WVMMN  TRR+ K+ ++VR+E   +     + AI E   ++ +KI K
Sbjct: 173 QATGHIFARATSTWVMMNSKTRRLSKMPEEVRDELTPWFIE--KQAIKE---DAPEKIIK 227

Query: 244 LEDPAQCSRLGLVPRRADLDMNKHVNNVTYIGWVLESMPQEIIDSHELRSITLDYRRECQ 303
           L   A+     L P+R+DLDMN+HVNNV Y+ W+LE++P +I++SH+L  ITL+YRREC 
Sbjct: 228 LNKEAKYMNSNLKPKRSDLDMNQHVNNVKYLRWMLETIPDQILESHQLSGITLEYRRECG 287

Query: 304 QSDIVDSLTSVE--------LIEGSEVVHGTNGSA--------SAAIAQQDKQDRQQFLH 347
            SDIV SL   E        ++E     +  NG +           +    +Q   ++ H
Sbjct: 288 SSDIVQSLCEPEEDEIVLNGMVEPDYCTNLLNGLSFVKSDIINGGGVLSYLEQRPIRYTH 347

Query: 348 LLRLSTE--GLEINRGRTEWRKK 368
           LL+   E    EI RG+T W++K
Sbjct: 348 LLQAKGEKQNEEIVRGKTTWKRK 370