Miyakogusa Predicted Gene

Lj1g3v3556980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3556980.1 tr|B9I171|B9I171_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_889752 PE=4
SV=1,41.73,1e-18,seg,NULL; coiled-coil,NULL; BCR-ASSOCIATED PROTEIN,
BAP,NULL; BCR-ASSOCIATED PROTEIN, BAP,B-cell rec,CUFF.30854.1
         (218 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g056133.1 | B-cell receptor-associated-like protein | HC |...   216   1e-56
Medtr4g049540.1 | B-cell receptor-associated-like protein | HC |...   100   1e-21
Medtr2g023880.1 | B-cell receptor-associated-like protein | HC |...    98   5e-21
Medtr2g088060.1 | B-cell receptor-associated-like protein | HC |...    75   3e-14
Medtr5g093360.1 | B-cell receptor-associated-like protein | HC |...    61   9e-10

>Medtr7g056133.1 | B-cell receptor-associated-like protein | HC |
           chr7:19556916-19546881 | 20130731
          Length = 218

 Score =  216 bits (551), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/197 (59%), Positives = 125/197 (63%)

Query: 22  KIGPLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAKLGTMSPMD 81
           KIGPLRDLVMKSLDQLKMGK PATVKTIAGT             KIQNKGAKLGTMSPMD
Sbjct: 22  KIGPLRDLVMKSLDQLKMGKAPATVKTIAGTMFVILLSSLMSLVKIQNKGAKLGTMSPMD 81

Query: 82  QVLWRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEELDNLXXXXXXXXX 141
           QVLWRTHLLEA L+GFTLFLGFLIDRMHHYL+KL+ LRSN GASKEE++NL         
Sbjct: 82  QVLWRTHLLEAYLLGFTLFLGFLIDRMHHYLQKLINLRSNMGASKEEVENLKKENVELKE 141

Query: 142 XXXXXXXXXXXLKEELTIXXXXXXXXXXXXXXXXXXVETAEAHVASLQKQAAXXXXXXXX 201
                      LK+EL+                   VETAEAHVASLQKQAA        
Sbjct: 142 KEEKASKEIKQLKKELSTLTEGLKKVKMESEEKDKRVETAEAHVASLQKQAADLLLEYDR 201

Query: 202 XXXXNQNLQAHTLGHKN 218
               NQNLQA    HK+
Sbjct: 202 LLEDNQNLQAQAGRHKS 218


>Medtr4g049540.1 | B-cell receptor-associated-like protein | HC |
           chr4:17424636-17429564 | 20130731
          Length = 221

 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/104 (45%), Positives = 63/104 (60%)

Query: 25  PLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAKLGTMSPMDQVL 84
           PLR LV+ SLD++K G+GP  V T+  T             KIQ +  + G ++P DQVL
Sbjct: 24  PLRKLVIVSLDRVKRGRGPIVVTTVGATLIVVLSSSLYSMAKIQQRTVEAGVLNPTDQVL 83

Query: 85  WRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEE 128
              H+LEASLMGF LFL  +IDR+HHY+ +L  LR    A K++
Sbjct: 84  MSKHMLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMEAVKKQ 127


>Medtr2g023880.1 | B-cell receptor-associated-like protein | HC |
           chr2:8462922-8465835 | 20130731
          Length = 222

 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%)

Query: 25  PLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAKLG-TMSPMDQV 83
           PLR LV+ +LD+LK G+GP  VKT+AGT             KIQ +G + G +++P DQV
Sbjct: 24  PLRKLVIMALDRLKRGRGPVMVKTVAGTVLVVLSSSVYSMMKIQQRGIEDGASVNPTDQV 83

Query: 84  LWRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEEL 129
           L   HLLEA+LMG  LFL  +IDR+HHY+ +L   R +  A K+++
Sbjct: 84  LMAKHLLEATLMGAILFLALMIDRLHHYIRELRIRRKSMEAVKKQM 129


>Medtr2g088060.1 | B-cell receptor-associated-like protein | HC |
           chr2:37075325-37073996 | 20130731
          Length = 222

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 1/105 (0%)

Query: 25  PLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAK-LGTMSPMDQV 83
           PLR+LV+ +L+++K G+GP  VKT+ GT             KIQ +  +   T+   DQV
Sbjct: 24  PLRNLVIITLNKVKRGRGPVIVKTVVGTVVTMLGSALYNIFKIQRRSIEGFATVDSTDQV 83

Query: 84  LWRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEE 128
           L   H+L+ASL+GF LFL  +IDR+HHY+ +L  LR+     K++
Sbjct: 84  LLSNHVLQASLLGFVLFLSLMIDRLHHYIRELRLLRNAVETGKKQ 128


>Medtr5g093360.1 | B-cell receptor-associated-like protein | HC |
          chr5:40755911-40756246 | 20130731
          Length = 111

 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 41/72 (56%)

Query: 25 PLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAKLGTMSPMDQVL 84
          P+R L++K LD LK G+GP  +KTIA T             KI  +    G ++P ++VL
Sbjct: 24 PIRKLMVKVLDLLKRGRGPLIIKTIATTVFIVFGSTIYTILKIHKRSMDAGMVNPTEEVL 83

Query: 85 WRTHLLEASLMG 96
             HLLEASLMG
Sbjct: 84 MAHHLLEASLMG 95