Miyakogusa Predicted Gene
- Lj1g3v3556980.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3556980.1 tr|B9I171|B9I171_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_889752 PE=4
SV=1,41.73,1e-18,seg,NULL; coiled-coil,NULL; BCR-ASSOCIATED PROTEIN,
BAP,NULL; BCR-ASSOCIATED PROTEIN, BAP,B-cell rec,CUFF.30854.1
(218 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g056133.1 | B-cell receptor-associated-like protein | HC |... 216 1e-56
Medtr4g049540.1 | B-cell receptor-associated-like protein | HC |... 100 1e-21
Medtr2g023880.1 | B-cell receptor-associated-like protein | HC |... 98 5e-21
Medtr2g088060.1 | B-cell receptor-associated-like protein | HC |... 75 3e-14
Medtr5g093360.1 | B-cell receptor-associated-like protein | HC |... 61 9e-10
>Medtr7g056133.1 | B-cell receptor-associated-like protein | HC |
chr7:19556916-19546881 | 20130731
Length = 218
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 125/197 (63%)
Query: 22 KIGPLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAKLGTMSPMD 81
KIGPLRDLVMKSLDQLKMGK PATVKTIAGT KIQNKGAKLGTMSPMD
Sbjct: 22 KIGPLRDLVMKSLDQLKMGKAPATVKTIAGTMFVILLSSLMSLVKIQNKGAKLGTMSPMD 81
Query: 82 QVLWRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEELDNLXXXXXXXXX 141
QVLWRTHLLEA L+GFTLFLGFLIDRMHHYL+KL+ LRSN GASKEE++NL
Sbjct: 82 QVLWRTHLLEAYLLGFTLFLGFLIDRMHHYLQKLINLRSNMGASKEEVENLKKENVELKE 141
Query: 142 XXXXXXXXXXXLKEELTIXXXXXXXXXXXXXXXXXXVETAEAHVASLQKQAAXXXXXXXX 201
LK+EL+ VETAEAHVASLQKQAA
Sbjct: 142 KEEKASKEIKQLKKELSTLTEGLKKVKMESEEKDKRVETAEAHVASLQKQAADLLLEYDR 201
Query: 202 XXXXNQNLQAHTLGHKN 218
NQNLQA HK+
Sbjct: 202 LLEDNQNLQAQAGRHKS 218
>Medtr4g049540.1 | B-cell receptor-associated-like protein | HC |
chr4:17424636-17429564 | 20130731
Length = 221
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%)
Query: 25 PLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAKLGTMSPMDQVL 84
PLR LV+ SLD++K G+GP V T+ T KIQ + + G ++P DQVL
Sbjct: 24 PLRKLVIVSLDRVKRGRGPIVVTTVGATLIVVLSSSLYSMAKIQQRTVEAGVLNPTDQVL 83
Query: 85 WRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEE 128
H+LEASLMGF LFL +IDR+HHY+ +L LR A K++
Sbjct: 84 MSKHMLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMEAVKKQ 127
>Medtr2g023880.1 | B-cell receptor-associated-like protein | HC |
chr2:8462922-8465835 | 20130731
Length = 222
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 25 PLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAKLG-TMSPMDQV 83
PLR LV+ +LD+LK G+GP VKT+AGT KIQ +G + G +++P DQV
Sbjct: 24 PLRKLVIMALDRLKRGRGPVMVKTVAGTVLVVLSSSVYSMMKIQQRGIEDGASVNPTDQV 83
Query: 84 LWRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEEL 129
L HLLEA+LMG LFL +IDR+HHY+ +L R + A K+++
Sbjct: 84 LMAKHLLEATLMGAILFLALMIDRLHHYIRELRIRRKSMEAVKKQM 129
>Medtr2g088060.1 | B-cell receptor-associated-like protein | HC |
chr2:37075325-37073996 | 20130731
Length = 222
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 25 PLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAK-LGTMSPMDQV 83
PLR+LV+ +L+++K G+GP VKT+ GT KIQ + + T+ DQV
Sbjct: 24 PLRNLVIITLNKVKRGRGPVIVKTVVGTVVTMLGSALYNIFKIQRRSIEGFATVDSTDQV 83
Query: 84 LWRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEE 128
L H+L+ASL+GF LFL +IDR+HHY+ +L LR+ K++
Sbjct: 84 LLSNHVLQASLLGFVLFLSLMIDRLHHYIRELRLLRNAVETGKKQ 128
>Medtr5g093360.1 | B-cell receptor-associated-like protein | HC |
chr5:40755911-40756246 | 20130731
Length = 111
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 25 PLRDLVMKSLDQLKMGKGPATVKTIAGTXXXXXXXXXXXXXKIQNKGAKLGTMSPMDQVL 84
P+R L++K LD LK G+GP +KTIA T KI + G ++P ++VL
Sbjct: 24 PIRKLMVKVLDLLKRGRGPLIIKTIATTVFIVFGSTIYTILKIHKRSMDAGMVNPTEEVL 83
Query: 85 WRTHLLEASLMG 96
HLLEASLMG
Sbjct: 84 MAHHLLEASLMG 95