Miyakogusa Predicted Gene

Lj1g3v3554780.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3554780.2 tr|A9TT83|A9TT83_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,32.32,5e-18, ,CUFF.30837.2
         (432 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g114130.2 | hypothetical protein | HC | chr3:53304150-5330...   545   e-155
Medtr3g114130.1 | hypothetical protein | HC | chr3:53304150-5330...   541   e-154

>Medtr3g114130.2 | hypothetical protein | HC |
           chr3:53304150-53306953 | 20130731
          Length = 409

 Score =  545 bits (1403), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/438 (62%), Positives = 324/438 (73%), Gaps = 35/438 (7%)

Query: 1   MDPVGVVFDHFKAFAKSGHDFFDGVFRRRNPIEILKRLQRESFSDLMKLRDRQEKVEKIL 60
           M+P+   FD FKAFA+S HDFFD +F RR   EILKRLQRESFSDLMKLRDRQ+KVE+++
Sbjct: 1   MEPL---FDQFKAFAESSHDFFDSIFGRRKSTEILKRLQRESFSDLMKLRDRQDKVERMI 57

Query: 61  SFYKSSNEGPFHEATTRVRGQVDLLGALLFMDNLNQQNVDATNRSGIRSGVNSNFIFETT 120
           SFYKSS  GPF EA+T VRG +D  GALL   + NQQN+D  +RSGI++G++S F+F+T 
Sbjct: 58  SFYKSSKGGPFQEASTHVRGHMDFTGALLIKGDFNQQNLDIISRSGIKTGIDSRFVFQTA 117

Query: 121 IRQKDTLSAEFVATKKGKEVLDDHDVEVPLSLRKVCYTANVNDFLSLMAIPMGAQCRDVA 180
           I +++ L+AEFVAT+KGKE   D  +E+PLSL K+ Y ANVND LSLMA+P+GAQCRDVA
Sbjct: 118 IGEENALAAEFVATQKGKEHHSDA-LEMPLSLAKLSYKANVNDSLSLMAVPVGAQCRDVA 176

Query: 181 VASNSVDQLGKGLTDFSSFGPPLLNLHNGSGIGITVRKSNFIASLAQFVVGLRSSSGSNT 240
           V SNS DQ  KGLTDFSSFGPPLL LHNGS  GI +RKS FIASLAQFV GL + SGSNT
Sbjct: 177 VGSNSFDQQEKGLTDFSSFGPPLLKLHNGSAFGIAMRKSCFIASLAQFVAGLGTPSGSNT 236

Query: 241 MENISSTFGQLVCQFTKGTKLSVLGLHQVPFSSKQHRNFGALAFPIVLSNQDE------E 294
            +N  STF QL CQF +GTKLSVL  HQ+PF SKQ R FGAL  P+VLSNQ E      E
Sbjct: 237 ADNRYSTFLQLACQFPRGTKLSVLSSHQLPFVSKQLRKFGALTIPLVLSNQHEVSETEPE 296

Query: 295 TELVRERTTQVSAGSIAVMVESELDGFTKIGGWVEMNKLNPKSIQWAITMSDVSEEDVLI 354
               R   TQVS GS A+M+ESELDGFTK+GGWVEMN L+PKS QWA             
Sbjct: 297 ASTFRGTRTQVSGGSAAIMLESELDGFTKLGGWVEMNTLDPKSAQWA------------- 343

Query: 355 FLDNLRAITMSDVSEDSFGWGMSLGGMIGDSASSDHFQAETYLKFNLGDKFCLKPGFAYV 414
                  +T++DVSE S GWGMSLGG+      + HFQAE+YLKFN+GDKFCLKPG  Y 
Sbjct: 344 -------VTLTDVSEGSSGWGMSLGGI-----GAKHFQAESYLKFNMGDKFCLKPGLVYA 391

Query: 415 IDGSSKIGALMIRSNWSL 432
            DG SKI +LM+RS+WSL
Sbjct: 392 TDGDSKIASLMLRSDWSL 409


>Medtr3g114130.1 | hypothetical protein | HC |
           chr3:53304150-53306953 | 20130731
          Length = 408

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 275/438 (62%), Positives = 324/438 (73%), Gaps = 36/438 (8%)

Query: 1   MDPVGVVFDHFKAFAKSGHDFFDGVFRRRNPIEILKRLQRESFSDLMKLRDRQEKVEKIL 60
           M+P+   FD FKAFA+S HDFFD +F RR   EILKRLQRESFSDLMKLRDRQ+KVE+++
Sbjct: 1   MEPL---FDQFKAFAESSHDFFDSIFGRRKSTEILKRLQRESFSDLMKLRDRQDKVERMI 57

Query: 61  SFYKSSNEGPFHEATTRVRGQVDLLGALLFMDNLNQQNVDATNRSGIRSGVNSNFIFETT 120
           SFYKSS  GPF EA+T VRG +D  GALL   + NQQN+D  +RSGI++G++S F+F+T 
Sbjct: 58  SFYKSSKGGPFQEASTHVRGHMDFTGALLIKGDFNQQNLDIISRSGIKTGIDSRFVFQTA 117

Query: 121 IRQKDTLSAEFVATKKGKEVLDDHDVEVPLSLRKVCYTANVNDFLSLMAIPMGAQCRDVA 180
           I +++ L+AEFVAT+KGKE   D  +E+PLSL K+ Y ANVND LSLMA+P+GAQCRDVA
Sbjct: 118 IGEENALAAEFVATQKGKEHHSDA-LEMPLSLAKLSYKANVNDSLSLMAVPVGAQCRDVA 176

Query: 181 VASNSVDQLGKGLTDFSSFGPPLLNLHNGSGIGITVRKSNFIASLAQFVVGLRSSSGSNT 240
           V SNS DQ  KGLTDFSSFGPPLL LHNGS  GI +RKS FIASLAQFV GL + SGSNT
Sbjct: 177 VGSNSFDQ-EKGLTDFSSFGPPLLKLHNGSAFGIAMRKSCFIASLAQFVAGLGTPSGSNT 235

Query: 241 MENISSTFGQLVCQFTKGTKLSVLGLHQVPFSSKQHRNFGALAFPIVLSNQDE------E 294
            +N  STF QL CQF +GTKLSVL  HQ+PF SKQ R FGAL  P+VLSNQ E      E
Sbjct: 236 ADNRYSTFLQLACQFPRGTKLSVLSSHQLPFVSKQLRKFGALTIPLVLSNQHEVSETEPE 295

Query: 295 TELVRERTTQVSAGSIAVMVESELDGFTKIGGWVEMNKLNPKSIQWAITMSDVSEEDVLI 354
               R   TQVS GS A+M+ESELDGFTK+GGWVEMN L+PKS QWA             
Sbjct: 296 ASTFRGTRTQVSGGSAAIMLESELDGFTKLGGWVEMNTLDPKSAQWA------------- 342

Query: 355 FLDNLRAITMSDVSEDSFGWGMSLGGMIGDSASSDHFQAETYLKFNLGDKFCLKPGFAYV 414
                  +T++DVSE S GWGMSLGG+      + HFQAE+YLKFN+GDKFCLKPG  Y 
Sbjct: 343 -------VTLTDVSEGSSGWGMSLGGI-----GAKHFQAESYLKFNMGDKFCLKPGLVYA 390

Query: 415 IDGSSKIGALMIRSNWSL 432
            DG SKI +LM+RS+WSL
Sbjct: 391 TDGDSKIASLMLRSDWSL 408