Miyakogusa Predicted Gene

Lj1g3v3529530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3529530.1 Non Characterized Hit- tr|I1HP97|I1HP97_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35.09,0.001,SUBFAMILY NOT NAMED,NULL; SINGLE STRANDED DNA BINDING
PROTEIN,Sequence-specific single-strand
DNA-bi,NODE_35589_length_721_cov_87.274620.path2.1
         (200 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g058460.1 | transcriptional corepressor leunig-like protei...   331   4e-91
Medtr7g058440.1 | transcriptional corepressor leunig-like protei...   304   3e-83
Medtr1g050340.2 | transcriptional corepressor leunig-like protei...   228   3e-60
Medtr1g050340.1 | transcriptional corepressor leunig-like protei...   228   3e-60
Medtr3g107910.1 | transcriptional corepressor leunig-like protei...   157   6e-39
Medtr3g107910.2 | transcriptional corepressor leunig-like protei...   157   6e-39
Medtr1g011610.1 | transcriptional corepressor leunig-like protei...   157   7e-39
Medtr1g011610.2 | transcriptional corepressor leunig-like protei...   157   8e-39
Medtr4g113080.1 | LisH-SSDP-WD40 | LC | chr4:46463876-46455979 |...    85   5e-17

>Medtr7g058460.1 | transcriptional corepressor leunig-like protein |
           HC | chr7:21060485-21052353 | 20130731
          Length = 784

 Score =  331 bits (848), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 157/200 (78%), Positives = 164/200 (82%)

Query: 1   MKPTLAQAQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYE 60
           MKPTL QAQSNWEADKMLDVYIHDYF+KR+LHN AKAFM EGKVSTDPVAIDAPGGFL+E
Sbjct: 1   MKPTLGQAQSNWEADKMLDVYIHDYFLKRRLHNTAKAFMAEGKVSTDPVAIDAPGGFLFE 60

Query: 61  WWSVFWDIFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPA 120
           WWSVFWDIFISRTNEKHSEAAASYIETQQ K                       DPNHP 
Sbjct: 61  WWSVFWDIFISRTNEKHSEAAASYIETQQTKAREQLQMQQLQLMQQRNAQLQRRDPNHPG 120

Query: 121 LGGSLNAMNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSH 180
           LGGSLN MNSEGMLGQPPAS LAMKMYEE+MKHP SMDSD SP L DANR+ALLKSATSH
Sbjct: 121 LGGSLNPMNSEGMLGQPPASALAMKMYEERMKHPHSMDSDVSPNLIDANRMALLKSATSH 180

Query: 181 QGQLVHGNSGNISTALQQIQ 200
           QGQLVHGNSGN+S  LQQ+Q
Sbjct: 181 QGQLVHGNSGNMSAVLQQMQ 200


>Medtr7g058440.1 | transcriptional corepressor leunig-like protein |
           HC | chr7:21046580-21037857 | 20130731
          Length = 775

 Score =  304 bits (779), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/200 (73%), Positives = 156/200 (78%), Gaps = 9/200 (4%)

Query: 1   MKPTLAQAQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYE 60
           MKPTL QAQSNWEADK+LDVYIHDYF+KR+LHN AKAFM EGKVSTDPVAIDAPGGFL+E
Sbjct: 1   MKPTLGQAQSNWEADKVLDVYIHDYFLKRRLHNTAKAFMAEGKVSTDPVAIDAPGGFLFE 60

Query: 61  WWSVFWDIFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPA 120
           WWSVFWDIFISRTNEKHSEAAASYIETQQ K                       DPNHP 
Sbjct: 61  WWSVFWDIFISRTNEKHSEAAASYIETQQTKVREQPQIQQLQRMQQRNAQLQRRDPNHPG 120

Query: 121 LGGSLNAMNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSH 180
           LGGSLN MNSEGMLGQPPA  LAMKMYE +MKHP S+         DANR+ALLKSATSH
Sbjct: 121 LGGSLNPMNSEGMLGQPPAGQLAMKMYEARMKHPHSI---------DANRMALLKSATSH 171

Query: 181 QGQLVHGNSGNISTALQQIQ 200
           QGQLVHGNSGN+S  LQQ+Q
Sbjct: 172 QGQLVHGNSGNMSAVLQQMQ 191


>Medtr1g050340.2 | transcriptional corepressor leunig-like protein |
           HC | chr1:19813511-19799845 | 20130731
          Length = 787

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 119/195 (61%), Positives = 144/195 (73%), Gaps = 5/195 (2%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGG-SLN 126
           IFI+RTNEKHS+ AA+Y+E QQ+K                       DPNHP +G   LN
Sbjct: 62  IFIARTNEKHSDNAAAYLEAQQLK-AKEQQLQMQQLQLMRQAQMQRRDPNHPPIGTPPLN 120

Query: 127 AMNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPT-LSDANRIALLKSATSHQGQLV 185
           A+ SEG+LGQ  A+ LA KMYE++MK+   MD++ S   L DA R+ALLKS T+H GQ+V
Sbjct: 121 AITSEGVLGQSTATALAAKMYEDRMKNSNPMDTETSSQPLLDA-RMALLKS-TNHPGQMV 178

Query: 186 HGNSGNISTALQQIQ 200
            GNS +++ ALQQ+Q
Sbjct: 179 QGNSVSVTAALQQMQ 193


>Medtr1g050340.1 | transcriptional corepressor leunig-like protein |
           HC | chr1:19813841-19799845 | 20130731
          Length = 786

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 119/195 (61%), Positives = 144/195 (73%), Gaps = 5/195 (2%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGG-SLN 126
           IFI+RTNEKHS+ AA+Y+E QQ+K                       DPNHP +G   LN
Sbjct: 62  IFIARTNEKHSDNAAAYLEAQQLK-AKEQQLQMQQLQLMRQAQMQRRDPNHPPIGTPPLN 120

Query: 127 AMNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPT-LSDANRIALLKSATSHQGQLV 185
           A+ SEG+LGQ  A+ LA KMYE++MK+   MD++ S   L DA R+ALLKS T+H GQ+V
Sbjct: 121 AITSEGVLGQSTATALAAKMYEDRMKNSNPMDTETSSQPLLDA-RMALLKS-TNHPGQMV 178

Query: 186 HGNSGNISTALQQIQ 200
            GNS +++ ALQQ+Q
Sbjct: 179 QGNSVSVTAALQQMQ 193


>Medtr3g107910.1 | transcriptional corepressor leunig-like protein
          | HC | chr3:49795618-49803676 | 20130731
          Length = 897

 Score =  157 bits (397), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L  +A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQLIK 85


>Medtr3g107910.2 | transcriptional corepressor leunig-like protein
          | HC | chr3:49795618-49803676 | 20130731
          Length = 904

 Score =  157 bits (397), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L  +A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQLIK 85


>Medtr1g011610.1 | transcriptional corepressor leunig-like protein
          | HC | chr1:2110686-2100048 | 20130731
          Length = 893

 Score =  157 bits (397), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L  +A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQLIK 85


>Medtr1g011610.2 | transcriptional corepressor leunig-like protein
          | HC | chr1:2110664-2100048 | 20130731
          Length = 902

 Score =  157 bits (396), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L  +A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQLIK 85


>Medtr4g113080.1 | LisH-SSDP-WD40 | LC | chr4:46463876-46455979 |
           20130731
          Length = 781

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%)

Query: 18  LDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWDIFISRTNEKH 77
           LD +I+DY VK +L+  A+ F  EG V  + + +DAPGG L+EWWSVFW++F+++    H
Sbjct: 35  LDAFIYDYLVKNQLYETARIFHDEGNVEQN-IVMDAPGGSLFEWWSVFWELFMAKQGFSH 93

Query: 78  SEAAASYIETQQIK 91
           SE A SY++ Q+++
Sbjct: 94  SEPALSYLKAQEMR 107