Miyakogusa Predicted Gene

Lj1g3v3529490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3529490.1 NODE_42364_length_1842_cov_34.508144.path1.1
         (424 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g058430.1 | E3 ubiquitin-protein ligase PRT1-like protein ...   572   e-163
Medtr4g022320.1 | E3 ubiquitin-protein ligase PRT1-like protein,...   415   e-116
Medtr4g022320.2 | E3 ubiquitin-protein ligase PRT1-like protein,...   355   6e-98
Medtr7g058450.1 | zinc finger, C3HC4 type (RING finger) protein ...   135   8e-32
Medtr3g037230.1 | zinc finger, C3HC4 type (RING finger) protein ...    54   2e-07
Medtr3g037230.2 | zinc finger, C3HC4 type (RING finger) protein ...    54   2e-07
Medtr3g037230.3 | zinc finger, C3HC4 type (RING finger) protein ...    54   2e-07
Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protei...    51   2e-06
Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein ...    49   7e-06
Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein ...    49   7e-06
Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein ...    49   7e-06
Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein ...    49   7e-06

>Medtr7g058430.1 | E3 ubiquitin-protein ligase PRT1-like protein |
           HC | chr7:21035981-21029441 | 20130731
          Length = 410

 Score =  572 bits (1474), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 292/423 (69%), Positives = 334/423 (78%), Gaps = 14/423 (3%)

Query: 1   MENSEFKDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQC 60
           MEN+  K+   D    E PDSFCC VCLDLLYKPIVLSCGHMCCFWC++KSM+ +RES+C
Sbjct: 1   MENTALKNLDHDEHEEEIPDSFCCCVCLDLLYKPIVLSCGHMCCFWCIHKSMSGVRESKC 60

Query: 61  PICRHQYYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSPEFDPDTCESQAK 120
           P CRHQYYHFPTVCQ+LHFLLLK+YPVAY RR NQTLEEEKKSG+YSP+FD DTCESQAK
Sbjct: 61  PTCRHQYYHFPTVCQLLHFLLLKLYPVAYNRRTNQTLEEEKKSGYYSPQFDFDTCESQAK 120

Query: 121 FGHXXXXXXXXITHLVPSLCNVGTSEGMEQSKSTNHEGDDGTIHSKRSSIGEAEIIGTPI 180
           FGH          +LV +  NVGTSE M+Q  ST+HEG             E EI GT +
Sbjct: 121 FGHSCSPSSSSTINLVSNSSNVGTSECMDQPGSTSHEG-------------EPEITGTRV 167

Query: 181 KGQKSSQDELCPPQKLSVADVMCIMCKQLLCQPVVLNCGHVYCETCVIKLADEMLRCQVC 240
           + +    D L   QK+SVADVMC MCKQLL  PVVL+CGHVYCETCV KLADEMLRCQVC
Sbjct: 168 EEKALPLDNL-TQQKISVADVMCTMCKQLLFHPVVLHCGHVYCETCVYKLADEMLRCQVC 226

Query: 241 QSPHPRGFPKVCLEFDQFLEEQFPEEYKWRRDAIELRQIKVKPETPSSCSSNNHNKGEKI 300
           Q PHPRGFPKVCLEFD FLEEQFPEEY  R DAIEL+ +K+KP+T SSC  +N N+GE +
Sbjct: 227 QIPHPRGFPKVCLEFDHFLEEQFPEEYAQRTDAIELKDVKLKPKTSSSCLLDNGNQGENM 286

Query: 301 EFWSDPESKVHIGVGCDFCGMYPIIGDRYKCEDCKEKMGFDLCGDCYDTRSKLPGRFNQQ 360
           E+ SDP+SK H GVGCDFCG+ PIIG+RYKC DCKEK+GFDLCGDCYD+RSKLPGRFNQQ
Sbjct: 287 EWLSDPDSKAHFGVGCDFCGVLPIIGNRYKCNDCKEKIGFDLCGDCYDSRSKLPGRFNQQ 346

Query: 361 HTSEHRFKLVQPNVIRNIMLRLVTGQLGDSSIVNESLENLEFPSEASGLFDDGEDNQNDP 420
           HTS+H FKLV+P+  RNIMLRL+TGQLGD S   +SL N+EF +EA GLFD G DNQN+P
Sbjct: 347 HTSDHSFKLVEPDPRRNIMLRLITGQLGDRSFNIQSLGNIEFTAEALGLFDGGVDNQNEP 406

Query: 421 EAT 423
           +AT
Sbjct: 407 DAT 409


>Medtr4g022320.1 | E3 ubiquitin-protein ligase PRT1-like protein,
           putative | HC | chr4:7389370-7382599 | 20130731
          Length = 379

 Score =  415 bits (1067), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/373 (58%), Positives = 252/373 (67%), Gaps = 29/373 (7%)

Query: 2   ENSEFKDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQCP 61
           EN+ FKDE       E  +SF C VCLDLLYKPIVLSCGH+ CFWCV+KSMN  RES CP
Sbjct: 4   ENNVFKDE----QEQEINESFVCCVCLDLLYKPIVLSCGHISCFWCVHKSMNASRESHCP 59

Query: 62  ICRHQYYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSPEFDPDTCESQAKF 121
            CRH YYHFPT+C+M HFLLLK YP AY RR NQTLEEEK++G  SP+     C+     
Sbjct: 60  TCRHPYYHFPTICEMFHFLLLKTYPEAYKRRENQTLEEEKETGHSSPQV---ICDPPGD- 115

Query: 122 GHXXXXXXXXITHLVPSLCNVGTS---EGMEQSKSTNHEGDDGTIHSKRSSIGEAEIIGT 178
                         +    N G++   E MEQS S NH+GD+G I    S      I+  
Sbjct: 116 --------SLTGTTINQTSNSGSTLSFESMEQSGSANHKGDEGIILEYSSDRKHGTIL-- 165

Query: 179 PIKGQKSSQDELCPPQKLSVADVMCIMCKQLLCQPVVLNCGHVYCETCVIKLADEMLRCQ 238
           P  G            K+ VAD+MC  CKQLL  PV LNCGHVYCETC+  L+ EM RCQ
Sbjct: 166 PQNGHIQQ-------PKILVADLMCPTCKQLLIHPVALNCGHVYCETCITDLSHEMFRCQ 218

Query: 239 VCQSPHPRGFPKVCLEFDQFLEEQFPEEYKWRRDAIELRQIKVKPETPSSCSSNNHNKGE 298
           VCQSPHP GFPKVCL  DQ+LEEQFPEEY  RRDAI+L QIKV+PET SSCS +  N+ E
Sbjct: 219 VCQSPHPEGFPKVCLALDQYLEEQFPEEYTQRRDAIQLGQIKVQPETTSSCSLSTDNR-E 277

Query: 299 KIEFWSDPESKVHIGVGCDFCGMYPIIGDRYKCEDCKEKMGFDLCGDCYDTRSKLPGRFN 358
           +I + S+PE  +H GVGCDFCG+YPIIGDRYKC DC+E +GFDLCGDCY+ RSK PGRFN
Sbjct: 278 RIAWGSNPELLIHPGVGCDFCGLYPIIGDRYKCVDCEESIGFDLCGDCYNKRSKRPGRFN 337

Query: 359 QQHTSEHRFKLVQ 371
           Q+HT +H   LVQ
Sbjct: 338 QKHTLDHTLMLVQ 350


>Medtr4g022320.2 | E3 ubiquitin-protein ligase PRT1-like protein,
           putative | HC | chr4:7388297-7382620 | 20130731
          Length = 330

 Score =  355 bits (910), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 184/323 (56%), Positives = 215/323 (66%), Gaps = 25/323 (7%)

Query: 52  MNCLRESQCPICRHQYYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSPEFD 111
           MN  RES CP CRH YYHFPT+C+M HFLLLK YP AY RR NQTLEEEK++G  SP+  
Sbjct: 1   MNASRESHCPTCRHPYYHFPTICEMFHFLLLKTYPEAYKRRENQTLEEEKETGHSSPQV- 59

Query: 112 PDTCESQAKFGHXXXXXXXXITHLVPSLCNVGTS---EGMEQSKSTNHEGDDGTIHSKRS 168
              C+                   +    N G++   E MEQS S NH+GD+G I    S
Sbjct: 60  --ICDPPGD---------SLTGTTINQTSNSGSTLSFESMEQSGSANHKGDEGIILEYSS 108

Query: 169 SIGEAEIIGTPIKGQKSSQDELCPPQKLSVADVMCIMCKQLLCQPVVLNCGHVYCETCVI 228
                 I+  P  G            K+ VAD+MC  CKQLL  PV LNCGHVYCETC+ 
Sbjct: 109 DRKHGTIL--PQNGHIQQ-------PKILVADLMCPTCKQLLIHPVALNCGHVYCETCIT 159

Query: 229 KLADEMLRCQVCQSPHPRGFPKVCLEFDQFLEEQFPEEYKWRRDAIELRQIKVKPETPSS 288
            L+ EM RCQVCQSPHP GFPKVCL  DQ+LEEQFPEEY  RRDAI+L QIKV+PET SS
Sbjct: 160 DLSHEMFRCQVCQSPHPEGFPKVCLALDQYLEEQFPEEYTQRRDAIQLGQIKVQPETTSS 219

Query: 289 CSSNNHNKGEKIEFWSDPESKVHIGVGCDFCGMYPIIGDRYKCEDCKEKMGFDLCGDCYD 348
           CS +  N+ E+I + S+PE  +H GVGCDFCG+YPIIGDRYKC DC+E +GFDLCGDCY+
Sbjct: 220 CSLSTDNR-ERIAWGSNPELLIHPGVGCDFCGLYPIIGDRYKCVDCEESIGFDLCGDCYN 278

Query: 349 TRSKLPGRFNQQHTSEHRFKLVQ 371
            RSK PGRFNQ+HT +H   LVQ
Sbjct: 279 KRSKRPGRFNQKHTLDHTLMLVQ 301


>Medtr7g058450.1 | zinc finger, C3HC4 type (RING finger) protein |
          HC | chr7:21051032-21046629 | 20130731
          Length = 100

 Score =  135 bits (340), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 80/97 (82%)

Query: 1  MENSEFKDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQC 60
          MEN+  K    D    E PDSFCC VCLDL YKPIVLSCG+MCCFWC++KSM+ +RES+C
Sbjct: 1  MENTTLKHVDHDEHEEEIPDSFCCCVCLDLFYKPIVLSCGYMCCFWCIHKSMSGVRESKC 60

Query: 61 PICRHQYYHFPTVCQMLHFLLLKVYPVAYTRRINQTL 97
          P CRHQYYHFPTVCQ+LHFLLLK+YPVAY RR NQTL
Sbjct: 61 PTCRHQYYHFPTVCQLLHFLLLKLYPVAYNRRTNQTL 97


>Medtr3g037230.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr3:13637290-13627006 | 20130731
          Length = 480

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 17  ETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQCPICRHQYYHFPTVCQM 76
           E  D F C++CL LLY+P+   CGH  C  C+++SM+  R ++CP+CR      P  C +
Sbjct: 183 ERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMD--RGNRCPLCRTVLLISPRTCSI 240

Query: 77  ---LHFLLLKVYPVAYTRR 92
              L  ++ K +   Y  R
Sbjct: 241 SVTLKSIIQKNFSEEYAER 259


>Medtr3g037230.2 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr3:13636031-13627006 | 20130731
          Length = 433

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 17  ETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQCPICRHQYYHFPTVCQM 76
           E  D F C++CL LLY+P+   CGH  C  C+++SM+  R ++CP+CR      P  C +
Sbjct: 136 ERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMD--RGNRCPLCRTVLLISPRTCSI 193

Query: 77  ---LHFLLLKVYPVAYTRR 92
              L  ++ K +   Y  R
Sbjct: 194 SVTLKSIIQKNFSEEYAER 212


>Medtr3g037230.3 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr3:13635998-13627006 | 20130731
          Length = 433

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 17  ETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRESQCPICRHQYYHFPTVCQM 76
           E  D F C++CL LLY+P+   CGH  C  C+++SM+  R ++CP+CR      P  C +
Sbjct: 136 ERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMD--RGNRCPLCRTVLLISPRTCSI 193

Query: 77  ---LHFLLLKVYPVAYTRR 92
              L  ++ K +   Y  R
Sbjct: 194 SVTLKSIIQKNFSEEYAER 212


>Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protein
          | HC | chr4:35466967-35468099 | 20130731
          Length = 199

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 10/77 (12%)

Query: 3  NSEFK---DEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES- 58
          N E+K   + + + +     + F C +CLD  ++P+V  CGH+ C+ C+YK +   R S 
Sbjct: 10 NQEWKADGNSVTETEKENIDNCFDCHICLDFAHEPVVTLCGHLFCWSCIYKWLFVQRASL 69

Query: 59 ------QCPICRHQYYH 69
                QCP+C+H   H
Sbjct: 70 APDEHPQCPVCKHDISH 86


>Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr7:37118841-37122307 | 20130731
          Length = 453

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 7   KDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES-QCPICRH 65
           KD++     G+  D F C++CLDL  +P++  CGH+ C+ C+Y+ ++   ++ +CP+C+ 
Sbjct: 156 KDDVEKAGGGDG-DFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKG 214

Query: 66  Q---------YYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSP 108
           +         Y    +   +     LK+ P    +R+    +  +++ F  P
Sbjct: 215 EVTIKSVTPIYGRGNSTRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFP 266


>Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr7:37118841-37121989 | 20130731
          Length = 453

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 7   KDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES-QCPICRH 65
           KD++     G+  D F C++CLDL  +P++  CGH+ C+ C+Y+ ++   ++ +CP+C+ 
Sbjct: 156 KDDVEKAGGGDG-DFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKG 214

Query: 66  Q---------YYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSP 108
           +         Y    +   +     LK+ P    +R+    +  +++ F  P
Sbjct: 215 EVTIKSVTPIYGRGNSTRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFP 266


>Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr7:37118817-37121936 | 20130731
          Length = 453

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 7   KDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES-QCPICRH 65
           KD++     G+  D F C++CLDL  +P++  CGH+ C+ C+Y+ ++   ++ +CP+C+ 
Sbjct: 156 KDDVEKAGGGDG-DFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKG 214

Query: 66  Q---------YYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSP 108
           +         Y    +   +     LK+ P    +R+    +  +++ F  P
Sbjct: 215 EVTIKSVTPIYGRGNSTRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFP 266


>Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr7:37118817-37122307 | 20130731
          Length = 453

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 7   KDEIMDIDHGETPDSFCCSVCLDLLYKPIVLSCGHMCCFWCVYKSMNCLRES-QCPICRH 65
           KD++     G+  D F C++CLDL  +P++  CGH+ C+ C+Y+ ++   ++ +CP+C+ 
Sbjct: 156 KDDVEKAGGGDG-DFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKG 214

Query: 66  Q---------YYHFPTVCQMLHFLLLKVYPVAYTRRINQTLEEEKKSGFYSP 108
           +         Y    +   +     LK+ P    +R+    +  +++ F  P
Sbjct: 215 EVTIKSVTPIYGRGNSTRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFP 266