Miyakogusa Predicted Gene

Lj1g3v3508280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3508280.1 tr|B9GNJ5|B9GNJ5_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_851473
PE=4,48.15,2e-16, ,CUFF.30812.1
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g058760.3 | DUF3685 family protein | HC | chr7:21175492-21...   159   1e-39
Medtr7g058760.1 | DUF3685 family protein | HC | chr7:21175492-21...   159   1e-39
Medtr7g058760.2 | DUF3685 family protein | HC | chr7:21175459-21...   156   7e-39

>Medtr7g058760.3 | DUF3685 family protein | HC |
           chr7:21175492-21166212 | 20130731
          Length = 515

 Score =  159 bits (401), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/145 (55%), Positives = 99/145 (68%), Gaps = 1/145 (0%)

Query: 1   MAECVASPFGIKLNIQ-RNPVRERGFSRHSANFSTVGRKYSRNGCQFLHFSSWKTCELSV 59
           MAECV SPF +KL++Q + P     F   + NF T+ RKY RN C+F HF + +  + SV
Sbjct: 1   MAECVTSPFCVKLHMQQKRPFTHSPFPHQTTNFKTIRRKYFRNECEFFHFLTLQKFKPSV 60

Query: 60  FRAIDLKITPCMRTIPLKCTGLGALVDFNGAASSGLVPVVDQVLLMGSIFLTYMAGVIPV 119
           F   DLKIT  +R  PL C G+GALVD +G  +S LVPV +QVLLMGSI LTYMAGVIPV
Sbjct: 61  FGVADLKITHRLRAFPLNCIGIGALVDSDGGTASNLVPVANQVLLMGSILLTYMAGVIPV 120

Query: 120 EKSYTNYQKIDSDKNVFPESSDNSG 144
           +KSYT  QK +S KN   +SSD SG
Sbjct: 121 DKSYTRDQKNNSVKNALRDSSDISG 145


>Medtr7g058760.1 | DUF3685 family protein | HC |
           chr7:21175492-21166212 | 20130731
          Length = 515

 Score =  159 bits (401), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/145 (55%), Positives = 99/145 (68%), Gaps = 1/145 (0%)

Query: 1   MAECVASPFGIKLNIQ-RNPVRERGFSRHSANFSTVGRKYSRNGCQFLHFSSWKTCELSV 59
           MAECV SPF +KL++Q + P     F   + NF T+ RKY RN C+F HF + +  + SV
Sbjct: 1   MAECVTSPFCVKLHMQQKRPFTHSPFPHQTTNFKTIRRKYFRNECEFFHFLTLQKFKPSV 60

Query: 60  FRAIDLKITPCMRTIPLKCTGLGALVDFNGAASSGLVPVVDQVLLMGSIFLTYMAGVIPV 119
           F   DLKIT  +R  PL C G+GALVD +G  +S LVPV +QVLLMGSI LTYMAGVIPV
Sbjct: 61  FGVADLKITHRLRAFPLNCIGIGALVDSDGGTASNLVPVANQVLLMGSILLTYMAGVIPV 120

Query: 120 EKSYTNYQKIDSDKNVFPESSDNSG 144
           +KSYT  QK +S KN   +SSD SG
Sbjct: 121 DKSYTRDQKNNSVKNALRDSSDISG 145


>Medtr7g058760.2 | DUF3685 family protein | HC |
           chr7:21175459-21166251 | 20130731
          Length = 512

 Score =  156 bits (394), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 80/144 (55%), Positives = 98/144 (68%), Gaps = 1/144 (0%)

Query: 1   MAECVASPFGIKLNIQ-RNPVRERGFSRHSANFSTVGRKYSRNGCQFLHFSSWKTCELSV 59
           MAECV SPF +KL++Q + P     F   + NF T+ RKY RN C+F HF + +  + SV
Sbjct: 1   MAECVTSPFCVKLHMQQKRPFTHSPFPHQTTNFKTIRRKYFRNECEFFHFLTLQKFKPSV 60

Query: 60  FRAIDLKITPCMRTIPLKCTGLGALVDFNGAASSGLVPVVDQVLLMGSIFLTYMAGVIPV 119
           F   DLKIT  +R  PL C G+GALVD +G  +S LVPV +QVLLMGSI LTYMAGVIPV
Sbjct: 61  FGVADLKITHRLRAFPLNCIGIGALVDSDGGTASNLVPVANQVLLMGSILLTYMAGVIPV 120

Query: 120 EKSYTNYQKIDSDKNVFPESSDNS 143
           +KSYT  QK +S KN   +SSD S
Sbjct: 121 DKSYTRDQKNNSVKNALRDSSDIS 144