Miyakogusa Predicted Gene

Lj1g3v3478240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3478240.1 Non Characterized Hit- tr|I3S0C9|I3S0C9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,Tetratricopeptide-like helical; GLR1902 PROTEIN,NULL;
TETRATRICOPEPTIDE REPEAT PROTEI,CUFF.30809.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g058930.1 | male sterility MS5 family protein | HC | chr7:...   325   2e-89
Medtr7g059010.2 | male sterility MS5 family protein | HC | chr7:...   308   2e-84
Medtr7g059010.1 | male sterility MS5 family protein | HC | chr7:...   308   2e-84
Medtr8g075260.1 | TPR superfamily protein | HC | chr8:31818432-3...   254   4e-68
Medtr2g030510.1 | TPR repeat protein, putative | HC | chr2:11504...   220   6e-58

>Medtr7g058930.1 | male sterility MS5 family protein | HC |
           chr7:21253696-21249411 | 20130731
          Length = 300

 Score =  325 bits (832), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/183 (86%), Positives = 168/183 (91%)

Query: 3   ERSGGGCSNYNYNCSKGKKDDSYHVLHKVPYGDTPYVRAKHAQLVEKDPEGAIALFWRAI 62
           E   G   N +   SKGKK+D YHVL+KVPYGD+PYVRAKHAQLVEKDPE AI LFW+AI
Sbjct: 2   EEERGSYKNKSLLLSKGKKEDIYHVLYKVPYGDSPYVRAKHAQLVEKDPEAAIVLFWKAI 61

Query: 63  NTGDKVDSALKDMAVVMKQLDRSEEAIEAICSFRGLCSKQSQESLDNVLIDLYKKCGKID 122
           N GDKVDSALKDMAVVMKQLDRSEEAIEAI SFRGLCSKQSQESLDNVLIDLYKKCGKID
Sbjct: 62  NAGDKVDSALKDMAVVMKQLDRSEEAIEAISSFRGLCSKQSQESLDNVLIDLYKKCGKID 121

Query: 123 EQIELLKRKLKLIYEGEAFNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYV 182
           E+I+LLK+KLKLIY+GEAFNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYV
Sbjct: 122 EEIDLLKQKLKLIYQGEAFNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYV 181

Query: 183 MAE 185
           MAE
Sbjct: 182 MAE 184


>Medtr7g059010.2 | male sterility MS5 family protein | HC |
           chr7:21290300-21287093 | 20130731
          Length = 295

 Score =  308 bits (790), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 144/169 (85%), Positives = 160/169 (94%)

Query: 17  SKGKKDDSYHVLHKVPYGDTPYVRAKHAQLVEKDPEGAIALFWRAINTGDKVDSALKDMA 76
           SKGKK+D YHV+HKVPYGDTPYV+AKHAQLV+KDPE AI  FW+AIN GDKVDSALKDMA
Sbjct: 11  SKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMA 70

Query: 77  VVMKQLDRSEEAIEAICSFRGLCSKQSQESLDNVLIDLYKKCGKIDEQIELLKRKLKLIY 136
           VVMKQLDR+EEAIEAI SFRGLC+K SQESLDNVL+DLYKKCG+++EQIELLKRKL+LIY
Sbjct: 71  VVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIY 130

Query: 137 EGEAFNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYVMAE 185
           +GEAFNG+ TKTARSHGKKFQVSIKQET+RLLGNLGWAYMQK NY+MAE
Sbjct: 131 QGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAE 179


>Medtr7g059010.1 | male sterility MS5 family protein | HC |
           chr7:21290335-21286538 | 20130731
          Length = 404

 Score =  308 bits (789), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 144/169 (85%), Positives = 160/169 (94%)

Query: 17  SKGKKDDSYHVLHKVPYGDTPYVRAKHAQLVEKDPEGAIALFWRAINTGDKVDSALKDMA 76
           SKGKK+D YHV+HKVPYGDTPYV+AKHAQLV+KDPE AI  FW+AIN GDKVDSALKDMA
Sbjct: 28  SKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMA 87

Query: 77  VVMKQLDRSEEAIEAICSFRGLCSKQSQESLDNVLIDLYKKCGKIDEQIELLKRKLKLIY 136
           VVMKQLDR+EEAIEAI SFRGLC+K SQESLDNVL+DLYKKCG+++EQIELLKRKL+LIY
Sbjct: 88  VVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIY 147

Query: 137 EGEAFNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYVMAE 185
           +GEAFNG+ TKTARSHGKKFQVSIKQET+RLLGNLGWAYMQK NY+MAE
Sbjct: 148 QGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAE 196


>Medtr8g075260.1 | TPR superfamily protein | HC |
           chr8:31818432-31815891 | 20130731
          Length = 479

 Score =  254 bits (648), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 116/165 (70%), Positives = 140/165 (84%)

Query: 21  KDDSYHVLHKVPYGDTPYVRAKHAQLVEKDPEGAIALFWRAINTGDKVDSALKDMAVVMK 80
           + +S+H+ HKVP GDTPYVRAK+ QLV+KDPE AI LFW AIN GD+VDSALKDMA+VMK
Sbjct: 32  RSESFHITHKVPIGDTPYVRAKNVQLVDKDPERAIPLFWAAINAGDRVDSALKDMAIVMK 91

Query: 81  QLDRSEEAIEAICSFRGLCSKQSQESLDNVLIDLYKKCGKIDEQIELLKRKLKLIYEGEA 140
           Q +R+EEAIEAI S R  CS Q+QESLDN+L+DLYK+CG++D+QI LL+ KL LI +G A
Sbjct: 92  QQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLRHKLYLIQQGLA 151

Query: 141 FNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYVMAE 185
           FNGK TKTARS GKKFQVS++QE +RLLGNLGWA MQ+ NY+ AE
Sbjct: 152 FNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAE 196


>Medtr2g030510.1 | TPR repeat protein, putative | HC |
           chr2:11504409-11508674 | 20130731
          Length = 617

 Score =  220 bits (561), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 106/165 (64%), Positives = 134/165 (81%)

Query: 21  KDDSYHVLHKVPYGDTPYVRAKHAQLVEKDPEGAIALFWRAINTGDKVDSALKDMAVVMK 80
           KDD +HV+HKVP GD+PYV+AK  QLV+KDP  AI+LFW AIN GD+V+SALKDMA+VMK
Sbjct: 47  KDDLFHVIHKVPSGDSPYVKAKQVQLVDKDPGKAISLFWAAINAGDRVESALKDMALVMK 106

Query: 81  QLDRSEEAIEAICSFRGLCSKQSQESLDNVLIDLYKKCGKIDEQIELLKRKLKLIYEGEA 140
           QL+RS+EAIEAI SFR LC   SQESLDN+L++LYK+ G++DE+I +L +KLK I +G  
Sbjct: 107 QLNRSDEAIEAIKSFRHLCPSDSQESLDNILVELYKRSGRVDEEIGMLHQKLKQIEDGMT 166

Query: 141 FNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYVMAE 185
           + G+ TK ARS GKK Q+S +QE SR+LGNL WAY+QK +Y  AE
Sbjct: 167 YVGRTTKHARSQGKKIQISAEQEISRILGNLAWAYLQKGDYKTAE 211