Miyakogusa Predicted Gene

Lj1g3v3464960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3464960.1 Non Characterized Hit- tr|I1JWE9|I1JWE9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.31,0,RAD50-INTERACTING PROTEIN 1 (PROTEIN RINT-1),NULL;
RINT1_TIP20,RINT-1/TIP-1; seg,NULL; RINT1_TIP1,RI,CUFF.30777.1
         (642 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g059230.1 | RINT-1/TIP-1 family protein | HC | chr7:214268...   993   0.0  
Medtr3g040540.1 | RINT-1/TIP-1 family protein | HC | chr3:142790...   339   4e-93
Medtr3g040540.2 | RINT-1/TIP-1 family protein | HC | chr3:142790...   338   7e-93

>Medtr7g059230.1 | RINT-1/TIP-1 family protein | HC |
           chr7:21426843-21422844 | 20130731
          Length = 801

 Score =  993 bits (2566), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/621 (78%), Positives = 537/621 (86%), Gaps = 8/621 (1%)

Query: 23  SITKTHHQWKHLVSAVDHRVDRALAMLRPHAVADHRAXXXXXXXXXXXXXXXXXXXDARI 82
           SIT  H QW++LVSAVDHRVDRALA+LRP A+ADHRA                   DARI
Sbjct: 188 SITNIHPQWRNLVSAVDHRVDRALAILRPQAIADHRALLSSLGWPPPLSALTSSHSDARI 247

Query: 83  GNQVLNPLMSMQANLKLKYTENFLALCHLQELQRQRKCRQLKGHHREVALRQPLWVIEEL 142
            N    PL SM A+ KL+Y+ENFLALC+LQELQR+RK RQL GH RE+ALRQPLW IEEL
Sbjct: 248 AN----PLQSMHADHKLRYSENFLALCNLQELQRKRKSRQLVGHDREIALRQPLWAIEEL 303

Query: 143 VNPLTLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEANLVGYSCREEWI 202
           VNPL+LAS++HFSKWVDKPEFIFTLVYKITRDYVDS+DEMLQPLVDEA +VGYSCREEWI
Sbjct: 304 VNPLSLASEKHFSKWVDKPEFIFTLVYKITRDYVDSVDEMLQPLVDEAKVVGYSCREEWI 363

Query: 203 SAMVSSLSTYLAKEIFPSYINQLDEESVTDIQSSARISWLHLIDLMIAFDKRIKSLVECS 262
           SAMV+SLSTYLAKEIFPSYI QL+EES+T IQSS+RISWLHLIDLMIAFDK+I SLVE S
Sbjct: 364 SAMVTSLSTYLAKEIFPSYITQLEEESITGIQSSSRISWLHLIDLMIAFDKKIMSLVENS 423

Query: 263 GISLSFDDDDILQRISSLSVFCDCPEWLDQWAKIELADALDKLKPDIENENTWRRKVEVV 322
           G+ LS DDD ILQRISSLSVFCD P+WLD WA+IEL DALDKLKPDIENEN WR+K+E V
Sbjct: 424 GVLLSLDDD-ILQRISSLSVFCDRPDWLDLWAEIELGDALDKLKPDIENENNWRKKIESV 482

Query: 323 VLSSCTDDHKSPLISSAFLHQLASVVDRCRSLPSITLRSKFLRLVGVPIIRKFFDSILIR 382
            LSS  DDHKSPL+SSAF+  LASVV+RCRSLP++TLRSKFLRLVGVPIIRKF DSIL+R
Sbjct: 483 ALSSNIDDHKSPLVSSAFVRHLASVVERCRSLPNVTLRSKFLRLVGVPIIRKFSDSILVR 542

Query: 383 CQEAEGLTALTDDDAVTKVAISINAAHYFESVLKEWSEDVFFLEMEMGMDEDDKPELSSN 442
           CQEAEGLTALTD+DA+TKVAISINAAHYFESVL EWSEDVFFLEM  G+DE+DK EL SN
Sbjct: 543 CQEAEGLTALTDNDALTKVAISINAAHYFESVLNEWSEDVFFLEM--GVDEEDKVELPSN 600

Query: 443 ANTD-EGSPESSRRVIFDXXXXXXXXFRTEWVEKISVVILRGFDARSREYVKNKRQWQKG 501
           +N D EG PESS RVIFD        FRTEWVEKI+VVILRGFDARSREY+KNK+QWQK 
Sbjct: 601 SNRDSEGWPESSNRVIFDDEIKKLEEFRTEWVEKIAVVILRGFDARSREYLKNKKQWQKS 660

Query: 502 EEGWAVSKTLIEALDYLQGKMSVVEVGLNSKDFVGVWRSLAAGIDRLIFNGILISNVKFH 561
           EEGW VSKTLIEALDYLQGKM+VVE GLNS+DFVGVWRSLAAGIDRLIFNGIL+SN KFH
Sbjct: 661 EEGWTVSKTLIEALDYLQGKMAVVEEGLNSRDFVGVWRSLAAGIDRLIFNGILLSNAKFH 720

Query: 562 NGGVERFSSDLDVLFGVFGSWCLRPEGFFPKTSEGLKLLKIDENRVQECMAGGTRWLKEN 621
           N GVERF SDLDVLFGVFGSWCLRPEGFFP T EGLKLLK+DE RVQECM GG R LKEN
Sbjct: 721 NSGVERFGSDLDVLFGVFGSWCLRPEGFFPNTIEGLKLLKMDEKRVQECMTGGKRRLKEN 780

Query: 622 GIRHLSLTEAEKVLKSRVFTT 642
           GIRHLS++EAEK+LK+RVF +
Sbjct: 781 GIRHLSVSEAEKILKNRVFAS 801


>Medtr3g040540.1 | RINT-1/TIP-1 family protein | HC |
           chr3:14279045-14273756 | 20130731
          Length = 831

 Score =  339 bits (870), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 214/648 (33%), Positives = 344/648 (53%), Gaps = 54/648 (8%)

Query: 24  ITKTHHQWKHLVSAVDHRVDRALAMLRPHAVADHRAXXXXXXXXXXXXXXXXXXXDARIG 83
           I K H QW  L+ +VD RVD+ LA LRP   ADHRA                        
Sbjct: 204 IVKFHSQWLCLLRSVDVRVDKILAALRPKVFADHRALLASLGWPPKLLQSENGSEQI--- 260

Query: 84  NQVLNPLMSMQANLKLKYTENFLALCHLQELQRQRKCRQLKGHHREVALRQPLWVIEELV 143
             + NPL+ M  + +  Y+++F+ALC LQ LQ +R+ RQ     +       LW I+ELV
Sbjct: 261 TDLPNPLVLMLEDKRRNYSQSFIALCALQHLQDKREERQNNNLKKSEKRNLRLWSIDELV 320

Query: 144 NPLTLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEANLVGYSCREEWIS 203
           +P++   + HF KW ++PE++F L YK+TR ++  +D++LQP++D+A L+  S +E W+ 
Sbjct: 321 SPISSRMEYHFGKWTEQPEYMFALTYKVTRGFITGVDDVLQPIIDKAGLISCSAKEAWVY 380

Query: 204 AMVSSLSTYLAKEIFPSYINQLDEESVTDIQSSARISWLHLIDLMIAFDKRIKSLVECSG 263
           AMV  LS +L K++      + + +    ++S    SWLHL+DL+IAFDK+++ LV    
Sbjct: 381 AMVQVLSGFLEKKVIALLAERYNAKH---LKSDVLSSWLHLVDLIIAFDKKMQCLVNLDT 437

Query: 264 ISL--SFDDDDILQRISSLSVFCDCPEWLDQWAKIELADALDKLKPDIENENTWRRKVEV 321
             L  S + +   + +S LS+FCD  +WL  WAK+E  +A  KL  +++ E  W      
Sbjct: 438 CFLVESGNFEGPSRGMSVLSIFCDRHDWLKIWAKLEFKNAWTKLNTELKEEKMW------ 491

Query: 322 VVLSSC--------------TDDHKSPLISSAFLHQLASVVDRCRSLPSITLRSKFLRLV 367
           VV  +C              T+D K+P I+  FL  +  +++RC+++PS+  R++F+R  
Sbjct: 492 VVSGTCKSGIDTDQEHLLSTTEDLKAPPIADFFLKVIWEMIERCQTMPSLLPRAQFIRSA 551

Query: 368 GVPIIRKFFDSILIRCQEAEGLTALTDDDAVTKVAISINAAHYFESVLKEWSEDVFFLEM 427
               I  FF  +L+R +  E      DD ++ +    INA+ Y    L+EWS+ V FLEM
Sbjct: 552 AGRFIWYFFKILLLRFKATELSPHNFDDGSIVRACGLINASRYISIKLQEWSDAVDFLEM 611

Query: 428 EMGMDEDDKPELSSNANTDEGSPESSRRVIFDXXXXXXXXFRTEWVEKISVVILRGFDAR 487
           ++  ++  K +L    ++D           FD          T W+ +I  VILR F+  
Sbjct: 612 KIAENDSSKKKLDDRMDSD---------CFFDEEIRSLSEMETNWLVEIIAVILRQFEIL 662

Query: 488 SREYVKNKRQWQKGEE-----------GWAVSKTLIEALDYLQGKMSVVEVGLNSKDFVG 536
           S EYV+NK  +++ ++              VS   +EALD L+  +++V+  LN KDF+ 
Sbjct: 663 SWEYVQNKYSFEEDQDYSNLGASRDSIDLVVSNDFVEALDALKSWLNIVKKNLNKKDFLD 722

Query: 537 VWRSLAAGIDRLIFNGILISNVKFHNGGVERFSSDLDVLFGVFGSWCLRPEGFFPKTSE- 595
           +WRS+A G+D  I + I  S ++F   G+ +F +D+  L  +F  +C RP  FFP  +E 
Sbjct: 723 LWRSIAEGLDHYISSSISTSEIRFSKIGINQFDADMQALIFIFQPYCARPHAFFPCINEI 782

Query: 596 --GLKLLKIDENRVQECMA---GGTRWLKENGIRHLSLTEAEKVLKSR 638
              LKL + + N ++  ++    G + L   GIRHLS+ +  +VL+ R
Sbjct: 783 LKLLKLKEEEANIIKGLLSSEESGRKCLHLRGIRHLSVNQVLQVLRYR 830


>Medtr3g040540.2 | RINT-1/TIP-1 family protein | HC |
           chr3:14279045-14273164 | 20130731
          Length = 661

 Score =  338 bits (868), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 214/648 (33%), Positives = 344/648 (53%), Gaps = 54/648 (8%)

Query: 24  ITKTHHQWKHLVSAVDHRVDRALAMLRPHAVADHRAXXXXXXXXXXXXXXXXXXXDARIG 83
           I K H QW  L+ +VD RVD+ LA LRP   ADHRA                        
Sbjct: 34  IVKFHSQWLCLLRSVDVRVDKILAALRPKVFADHRALLASLGWPPKLLQSENGSEQI--- 90

Query: 84  NQVLNPLMSMQANLKLKYTENFLALCHLQELQRQRKCRQLKGHHREVALRQPLWVIEELV 143
             + NPL+ M  + +  Y+++F+ALC LQ LQ +R+ RQ     +       LW I+ELV
Sbjct: 91  TDLPNPLVLMLEDKRRNYSQSFIALCALQHLQDKREERQNNNLKKSEKRNLRLWSIDELV 150

Query: 144 NPLTLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEANLVGYSCREEWIS 203
           +P++   + HF KW ++PE++F L YK+TR ++  +D++LQP++D+A L+  S +E W+ 
Sbjct: 151 SPISSRMEYHFGKWTEQPEYMFALTYKVTRGFITGVDDVLQPIIDKAGLISCSAKEAWVY 210

Query: 204 AMVSSLSTYLAKEIFPSYINQLDEESVTDIQSSARISWLHLIDLMIAFDKRIKSLVECSG 263
           AMV  LS +L K++      + + +    ++S    SWLHL+DL+IAFDK+++ LV    
Sbjct: 211 AMVQVLSGFLEKKVIALLAERYNAKH---LKSDVLSSWLHLVDLIIAFDKKMQCLVNLDT 267

Query: 264 ISL--SFDDDDILQRISSLSVFCDCPEWLDQWAKIELADALDKLKPDIENENTWRRKVEV 321
             L  S + +   + +S LS+FCD  +WL  WAK+E  +A  KL  +++ E  W      
Sbjct: 268 CFLVESGNFEGPSRGMSVLSIFCDRHDWLKIWAKLEFKNAWTKLNTELKEEKMW------ 321

Query: 322 VVLSSC--------------TDDHKSPLISSAFLHQLASVVDRCRSLPSITLRSKFLRLV 367
           VV  +C              T+D K+P I+  FL  +  +++RC+++PS+  R++F+R  
Sbjct: 322 VVSGTCKSGIDTDQEHLLSTTEDLKAPPIADFFLKVIWEMIERCQTMPSLLPRAQFIRSA 381

Query: 368 GVPIIRKFFDSILIRCQEAEGLTALTDDDAVTKVAISINAAHYFESVLKEWSEDVFFLEM 427
               I  FF  +L+R +  E      DD ++ +    INA+ Y    L+EWS+ V FLEM
Sbjct: 382 AGRFIWYFFKILLLRFKATELSPHNFDDGSIVRACGLINASRYISIKLQEWSDAVDFLEM 441

Query: 428 EMGMDEDDKPELSSNANTDEGSPESSRRVIFDXXXXXXXXFRTEWVEKISVVILRGFDAR 487
           ++  ++  K +L    ++D           FD          T W+ +I  VILR F+  
Sbjct: 442 KIAENDSSKKKLDDRMDSD---------CFFDEEIRSLSEMETNWLVEIIAVILRQFEIL 492

Query: 488 SREYVKNKRQWQKGEE-----------GWAVSKTLIEALDYLQGKMSVVEVGLNSKDFVG 536
           S EYV+NK  +++ ++              VS   +EALD L+  +++V+  LN KDF+ 
Sbjct: 493 SWEYVQNKYSFEEDQDYSNLGASRDSIDLVVSNDFVEALDALKSWLNIVKKNLNKKDFLD 552

Query: 537 VWRSLAAGIDRLIFNGILISNVKFHNGGVERFSSDLDVLFGVFGSWCLRPEGFFPKTSE- 595
           +WRS+A G+D  I + I  S ++F   G+ +F +D+  L  +F  +C RP  FFP  +E 
Sbjct: 553 LWRSIAEGLDHYISSSISTSEIRFSKIGINQFDADMQALIFIFQPYCARPHAFFPCINEI 612

Query: 596 --GLKLLKIDENRVQECMA---GGTRWLKENGIRHLSLTEAEKVLKSR 638
              LKL + + N ++  ++    G + L   GIRHLS+ +  +VL+ R
Sbjct: 613 LKLLKLKEEEANIIKGLLSSEESGRKCLHLRGIRHLSVNQVLQVLRYR 660