Miyakogusa Predicted Gene

Lj1g3v3458500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3458500.1 tr|A9T4N0|A9T4N0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88027
,38.58,3e-19,EF-hand,NULL; EF_HAND_2,EF-HAND 2; no
description,EF-hand-like domain; SUBFAMILY NOT NAMED,NULL;
EF-,CUFF.30759.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g024890.1 | calcium-binding EF-hand protein | HC | chr7:82...   229   6e-61
Medtr7g024873.1 | calcium-binding EF-hand protein | HC | chr7:82...   229   8e-61
Medtr7g024880.1 | calcium-binding EF-hand protein | HC | chr7:82...   228   1e-60
Medtr8g446810.1 | calcium-binding EF-hand protein | HC | chr8:18...   129   7e-31
Medtr7g024900.1 | calcium ion-binding protein, putative | HC | c...    87   6e-18
Medtr1g081270.1 | EF-hand protein | HC | chr1:36168657-36170148 ...    80   5e-16
Medtr4g075610.1 | calcium-binding EF-hand protein | HC | chr4:28...    50   4e-07
Medtr4g075610.2 | calcium-binding EF-hand protein | HC | chr4:28...    50   5e-07
Medtr3g117680.1 | calcium-binding EF-hand protein | HC | chr3:55...    50   9e-07
Medtr3g117680.3 | calcium-binding EF-hand protein | HC | chr3:55...    49   1e-06
Medtr3g117680.4 | calcium-binding EF-hand protein | HC | chr3:55...    49   1e-06

>Medtr7g024890.1 | calcium-binding EF-hand protein | HC |
           chr7:8237131-8236498 | 20130731
          Length = 137

 Score =  229 bits (584), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 110/137 (80%), Positives = 123/137 (89%)

Query: 1   MSVEILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQCLRVLETHFG 60
           MSVEILDGATIV+FLEDEEAFN SV NRFA LDTN DGLLSYEEMLKEL+ LR+ ETHFG
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNNDGLLSYEEMLKELRSLRIFETHFG 60

Query: 61  IDVKPDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMALEE 120
           IDV  DP+EL RVY+SLFIQFDHNLNG++DLEEFK ET++MMLAMADGMGF+P+QM LEE
Sbjct: 61  IDVDSDPNELARVYESLFIQFDHNLNGTIDLEEFKKETKQMMLAMADGMGFMPIQMVLEE 120

Query: 121 DSILKRAVERECNKVVA 137
           DSILK+AVE + NKV A
Sbjct: 121 DSILKKAVEIDSNKVAA 137


>Medtr7g024873.1 | calcium-binding EF-hand protein | HC |
           chr7:8224031-8223374 | 20130731
          Length = 137

 Score =  229 bits (583), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 111/137 (81%), Positives = 124/137 (90%)

Query: 1   MSVEILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQCLRVLETHFG 60
           MSVEILDGATIV+FLEDEEAFN SV NRFA LDTNKDGLLSY+EMLKEL+ LRV ETHFG
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNKDGLLSYDEMLKELRSLRVFETHFG 60

Query: 61  IDVKPDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMALEE 120
           IDV  DP+EL RVY+SLFIQFDHNLNG+VDLEEFK ET+++MLAMADGMGF+P+QM LEE
Sbjct: 61  IDVDSDPNELARVYESLFIQFDHNLNGTVDLEEFKKETKQIMLAMADGMGFMPIQMVLEE 120

Query: 121 DSILKRAVERECNKVVA 137
           DSILK AVERE +K+ A
Sbjct: 121 DSILKIAVERESSKLAA 137


>Medtr7g024880.1 | calcium-binding EF-hand protein | HC |
           chr7:8233991-8233175 | 20130731
          Length = 137

 Score =  228 bits (582), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 110/137 (80%), Positives = 122/137 (89%)

Query: 1   MSVEILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQCLRVLETHFG 60
           MSVEILDGATIV+FLEDEEAFN SV NRFA LDTN DGLLSYEEMLKEL+ LRV ETHFG
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNNDGLLSYEEMLKELRSLRVFETHFG 60

Query: 61  IDVKPDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMALEE 120
           IDV  DP+EL RVY+SLF QFDHNLNG++DLEEFK ET++MMLAMADGMGF+P+QM LE+
Sbjct: 61  IDVVSDPNELARVYESLFTQFDHNLNGTIDLEEFKKETKQMMLAMADGMGFMPIQMVLEK 120

Query: 121 DSILKRAVERECNKVVA 137
           DSILK+AVERE N V A
Sbjct: 121 DSILKKAVEREYNNVAA 137


>Medtr8g446810.1 | calcium-binding EF-hand protein | HC |
           chr8:18319909-18319217 | 20130731
          Length = 141

 Score =  129 bits (325), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 96/140 (68%), Gaps = 3/140 (2%)

Query: 1   MSVEILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQCLRVLETHFG 60
           M V I+DG T+ +F+ D+  F  S+  +F  LD N DG+LS  E+ K  + +R++E+HFG
Sbjct: 1   MGVVIIDGTTVRDFIADDTHFTNSINEQFTSLDLNNDGVLSRAELRKAFESMRLIESHFG 60

Query: 61  IDVKPDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMALEE 120
           IDV   P++L R+Y S+F  FD + +GSVD EEFK E +++MLA+ADG+G  P+QM LE+
Sbjct: 61  IDVTTPPEQLTRLYDSVFDTFDGDGSGSVDREEFKNEMKKIMLAIADGLGSSPIQMVLED 120

Query: 121 D---SILKRAVERECNKVVA 137
           D   ++LK+A + E +K  A
Sbjct: 121 DDEMNLLKKAADLEASKNAA 140


>Medtr7g024900.1 | calcium ion-binding protein, putative | HC |
          chr7:8240024-8239857 | 20130731
          Length = 55

 Score = 86.7 bits (213), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/51 (84%), Positives = 47/51 (92%)

Query: 1  MSVEILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQC 51
          MSVEILDGATIV+FLEDEEAFN SV N+FA LDTNKDGLLSY+EMLKEL+ 
Sbjct: 1  MSVEILDGATIVHFLEDEEAFNSSVGNQFARLDTNKDGLLSYDEMLKELRS 51


>Medtr1g081270.1 | EF-hand protein | HC | chr1:36168657-36170148 |
           20130731
          Length = 134

 Score = 80.5 bits (197), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 5/131 (3%)

Query: 1   MSVEILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQCLRVLETHFG 60
           M+V +++  T+ +F+ D   F+  V   FA+LD N DG LS +E+         L +H  
Sbjct: 1   MNVAVVNSTTVTDFVNDTTNFDSFVKEWFAMLDANGDGNLSRDEIRGGFAWFMPLGSH-- 58

Query: 61  IDVKPDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMALEE 120
                  +E+ R+ + +F +FD + N S+DL  FK    E+M A+A G+G  P+ + LE+
Sbjct: 59  ---SQSQEEIDRILELIFTRFDEDQNDSLDLNGFKSLMTEIMNAVARGIGGSPIIVVLEK 115

Query: 121 DSILKRAVERE 131
           DS+L +AV+RE
Sbjct: 116 DSLLMKAVQRE 126


>Medtr4g075610.1 | calcium-binding EF-hand protein | HC |
           chr4:28897277-28893295 | 20130731
          Length = 375

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 11/117 (9%)

Query: 2   SVEILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQ-CLRVLETHFG 60
           +VE+LDG+ I+  + +++ F+  V ++F  LD +KDG LS    L ELQ  +  + +  G
Sbjct: 17  AVEVLDGSNIMELVGNKDVFSNFVNHKFQELDRDKDGKLS----LTELQPAVSDIGSALG 72

Query: 61  IDVK---PDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
           +  K   PD D    +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 73  LPAKGTNPDSD---HIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPI 126


>Medtr4g075610.2 | calcium-binding EF-hand protein | HC |
           chr4:28897198-28893295 | 20130731
          Length = 271

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 11/117 (9%)

Query: 2   SVEILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQ-CLRVLETHFG 60
           +VE+LDG+ I+  + +++ F+  V ++F  LD +KDG LS    L ELQ  +  + +  G
Sbjct: 17  AVEVLDGSNIMELVGNKDVFSNFVNHKFQELDRDKDGKLS----LTELQPAVSDIGSALG 72

Query: 61  IDVK---PDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
           +  K   PD D    +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 73  LPAKGTNPDSD---HIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPI 126


>Medtr3g117680.1 | calcium-binding EF-hand protein | HC |
           chr3:55094884-55099534 | 20130731
          Length = 362

 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 4   EILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQCLRVLETHFGIDV 63
           E+LDG+ I+  + +E+ FN  V ++F  LD ++DG LS +E+   +  +           
Sbjct: 11  EVLDGSNIMELVGNEQGFNKFVDHKFHELDKDRDGKLSLKELEPAVADIGAALGLPAQGT 70

Query: 64  KPDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
            PD D    +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 71  TPDSD---HIYYQVLNEFTHGKQEKVSKSEFKEVLSDILLGMAAGLKRDPI 118


>Medtr3g117680.3 | calcium-binding EF-hand protein | HC |
           chr3:55094884-55098943 | 20130731
          Length = 296

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 4   EILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQCLRVLETHFGIDV 63
           E+LDG+ I+  + +E+ FN  V ++F  LD ++DG LS +E+   +  +           
Sbjct: 11  EVLDGSNIMELVGNEQGFNKFVDHKFHELDKDRDGKLSLKELEPAVADIGAALGLPAQGT 70

Query: 64  KPDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
            PD D    +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 71  TPDSD---HIYYQVLNEFTHGKQEKVSKSEFKEVLSDILLGMAAGLKRDPI 118


>Medtr3g117680.4 | calcium-binding EF-hand protein | HC |
           chr3:55094884-55099534 | 20130731
          Length = 262

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 4   EILDGATIVNFLEDEEAFNISVCNRFALLDTNKDGLLSYEEMLKELQCLRVLETHFGIDV 63
           E+LDG+ I+  + +E+ FN  V ++F  LD ++DG LS +E+   +  +           
Sbjct: 11  EVLDGSNIMELVGNEQGFNKFVDHKFHELDKDRDGKLSLKELEPAVADIGAALGLPAQGT 70

Query: 64  KPDPDELGRVYKSLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
            PD D    +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 71  TPDSD---HIYYQVLNEFTHGKQEKVSKSEFKEVLSDILLGMAAGLKRDPI 118