Miyakogusa Predicted Gene

Lj1g3v3457460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3457460.1 Non Characterized Hit- tr|Q9SR26|Q9SR26_ARATH
Putative MYB family transcription factor
OS=Arabidopsi,66.67,0.0000000000001,seg,NULL,
NODE_89199_length_161_cov_19.422359.path2.1
         (63 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g461410.1 | myb transcription factor | HC | chr7:22216202-...    76   6e-15
Medtr7g061330.1 | myb transcription factor | HC | chr7:22157000-...    76   6e-15

>Medtr7g461410.1 | myb transcription factor | HC |
          chr7:22216202-22220641 | 20130731
          Length = 566

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 1  MAGVKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTST--SHRRTTGPIRRA 58
          M   +SE CCLENKQ+T              ++KSPGICSP +TST  SHRRTTGPIRRA
Sbjct: 1  MDEFESEVCCLENKQSTVASCSSVSEGSDSIIQKSPGICSPTATSTSPSHRRTTGPIRRA 60

Query: 59 KGGWT 63
          KGGWT
Sbjct: 61 KGGWT 65


>Medtr7g061330.1 | myb transcription factor | HC |
          chr7:22157000-22164437 | 20130731
          Length = 566

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 1  MAGVKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTST--SHRRTTGPIRRA 58
          M   +SE CCLENKQ+T              ++KSPGICSP +TST  SHRRTTGPIRRA
Sbjct: 1  MDEFESEVCCLENKQSTVASCSSVSEGSDSIIQKSPGICSPTATSTSPSHRRTTGPIRRA 60

Query: 59 KGGWT 63
          KGGWT
Sbjct: 61 KGGWT 65