Miyakogusa Predicted Gene

Lj1g3v3444160.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3444160.2 Non Characterized Hit- tr|G7IKS8|G7IKS8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,60.49,5e-17,TPR-like,NULL; no
description,Tetratricopeptide-like helical; TPR_8,Tetratricopeptide
repeat,CUFF.30752.2
         (384 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g062630.1 | TPR protein | HC | chr7:22795096-22800578 | 20...   567   e-162
Medtr6g445490.1 | transmembrane protein, putative | HC | chr6:15...   465   e-131
Medtr4g078800.1 | hypothetical protein | LC | chr4:30461500-3045...    94   2e-19
Medtr2g093870.1 | hypothetical protein | LC | chr2:40021720-4001...    92   1e-18
Medtr7g062690.1 | TPR superfamily protein, putative | LC | chr7:...    84   3e-16

>Medtr7g062630.1 | TPR protein | HC | chr7:22795096-22800578 |
           20130731
          Length = 428

 Score =  567 bits (1461), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 265/387 (68%), Positives = 331/387 (85%), Gaps = 3/387 (0%)

Query: 1   MAVPDAVRMINYAMKQARTDKSVGSYGLGMLVLKHCVTTELTEGEDPQHENSKGIALLAW 60
           +AV D VRM  YA++QAR++KSVGSYG+G LVLKHC+TTELTEG DP+HENSKGIALL  
Sbjct: 42  LAVDDVVRMSEYALRQARSEKSVGSYGMGYLVLKHCLTTELTEGNDPKHENSKGIALLTM 101

Query: 61  STLLSERGEYGDAIEKLQSVQELTNSLLGVRVAAFEAEAGLHLELGQDDMASAVGDKCIE 120
           STL SERG+Y DAIE+L  VQEL+NS LG+RVAA+EA+AGLHLEL QDDMASAV DKCIE
Sbjct: 102 STLFSERGDYDDAIEQLNGVQELSNSYLGIRVAAYEAQAGLHLELEQDDMASAVADKCIE 161

Query: 121 LLEKQNAEDSEALKVRAKALKGLIELVKGNIESAEAFFDKSLLSTLCDGSAALSYGEFLQ 180
           L+E +  ED EAL VRA+A+KGL+ELVKG+I+SAE FFDK+L + LCDG+AALSY EF Q
Sbjct: 162 LVENEKTEDFEALNVRARAIKGLVELVKGDIKSAEPFFDKALRTKLCDGTAALSYAEFQQ 221

Query: 181 TKHNYSMAKEVYQNIIQGATTIKNSGNPYLGAGNMNLEGLMMGAMCALGQLESHLGNFGN 240
           T+ NYSMAKE+YQN+++GAT +K  GN YLG GNM++EGLMM AMC LGQLESHLGNF N
Sbjct: 222 TRQNYSMAKEIYQNVLEGATELKERGNVYLGGGNMSMEGLMMQAMCGLGQLESHLGNFRN 281

Query: 241 AEQHLTKALNQAEETYGDRHPKVGVVLTSIALMYRRKAMQEHSSSILVQEGLYRRVTDLL 300
           AE+HLTKA+ +A++ YG++HPK+GVVLT++ALMYRRKA+++ SSS++VQEGLYR+V+++L
Sbjct: 282 AEEHLTKAVTKADQIYGEKHPKLGVVLTNMALMYRRKAIEQKSSSLVVQEGLYRKVSEIL 341

Query: 301 KVPPGETDSEGAVP---LVDRSDIAALARGAYSEVLSIQENRKDEGEKMKNFAEAIWRNH 357
           K PP ET+SEGA      V R+DI ALA G Y+E+LS+QENR+ EGEKMK  ++++W+N+
Sbjct: 342 KFPPPETESEGAAAAKQTVKRNDIVALASGGYAELLSVQENRQSEGEKMKKLSDSLWKNN 401

Query: 358 RMSLDDALGNTESNKVWVIDARISRLL 384
           RMSLDD LGNTE++   V+DARISRLL
Sbjct: 402 RMSLDDFLGNTEASICPVVDARISRLL 428


>Medtr6g445490.1 | transmembrane protein, putative | HC |
           chr6:15871989-15864648 | 20130731
          Length = 442

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/430 (56%), Positives = 308/430 (71%), Gaps = 48/430 (11%)

Query: 1   MAVPDAVRMINYAMKQARTDKSVGSYGLGMLVLKHCVTTELTEGEDPQHENSKGIALLAW 60
           +AV D VR+  YA+ +AR++KSVGSYG+G LVLKHC+TTELTEG DP+HENSKGIALLA 
Sbjct: 15  LAVVDVVRLSEYALTEARSEKSVGSYGIGFLVLKHCLTTELTEGNDPKHENSKGIALLAM 74

Query: 61  STLLSERGEYGDAIEKLQSVQELTNS----------------------LLGVR------- 91
           STL  ERG+Y DAIEKL  VQEL+NS                      L  VR       
Sbjct: 75  STLFCERGDYVDAIEKLNGVQELSNSWESEVNPFEPLLLFTAFARVLFLFLVRIFFSVSW 134

Query: 92  ----VAAFEAEAGLHLELGQDDMASAVGDKCIELLEKQNAEDSEALKVRAKALKGLIELV 147
               VAA+EA+AGLHLEL QDDMASAV DKCIEL+E +  ED EALK+RA+A+KGL+ELV
Sbjct: 135 FLVVVAAYEAQAGLHLELEQDDMASAVADKCIELVENEKTEDFEALKIRARAIKGLVELV 194

Query: 148 KGNIESAEAFFDKSLLSTLCDGSAALSYGEFLQTKHNYSMAKEVYQNIIQGATTIKNSGN 207
           KG+I+SAE FF+KSL + LC G+AALSY EF QT+ NYSMAKE+Y+N+++GAT +K  GN
Sbjct: 195 KGDIKSAEPFFNKSLRTKLCYGTAALSYAEFQQTRQNYSMAKEIYKNVLEGATELKERGN 254

Query: 208 PYLGAGNMNLEGLMMGAMCALGQLESHLGN-FGNAEQHLTKA-LNQAEET---------Y 256
            YLG GNMN++GL + AM A+GQLESHLG  F N   +   A LN    T         Y
Sbjct: 255 IYLGGGNMNIDGLRLQAMFAIGQLESHLGRLFANGTDYGKSAELNLKVHTALSLSLVVAY 314

Query: 257 GDRHPKVGVVLTSIALMYRRKAMQEHSSSILVQEGLYRRVTDLLKVPPGETDSEGAV--P 314
            ++HPK+ VVLT+ ALMY+R   +EH  S++VQEG+YR V+++LK PP ET+SEGA   P
Sbjct: 315 CEKHPKLAVVLTNRALMYKRFMEKEH--SLMVQEGIYREVSEMLKFPPPETESEGAAAKP 372

Query: 315 LVDRSDIAALARGAYSEVLSIQENRKDEGEKMKNFAEAIWRNHRMSLDDALGNTESNKVW 374
            V R+D+ ALA G Y+EVLS QE+R+ EG +MK  ++++W+N RMSLDD LGNTE++   
Sbjct: 373 PVKRNDMVALASGGYAEVLSFQEDRQHEGVEMKKLSDSLWKNKRMSLDDFLGNTEASIGT 432

Query: 375 VIDARISRLL 384
           V+DARI RLL
Sbjct: 433 VVDARICRLL 442


>Medtr4g078800.1 | hypothetical protein | LC |
           chr4:30461500-30457061 | 20130731
          Length = 158

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 89/169 (52%), Gaps = 40/169 (23%)

Query: 87  LLGVRVAAFEAEAGLHLELGQDDMASAVGDKCIEL----------LEKQNAEDSEA-LKV 135
           ++G RVAA+EAE         D M S V D+C             LE++  E+S    K 
Sbjct: 11  VVGHRVAAYEAE---------DSMVSVVADECRTKRESGSKRRKGLERRGLEESRVERKS 61

Query: 136 RAKALKGLIELVKGNIESAEAFFDKSLLSTL------CDGSAALSYGEFLQTKHNYSMAK 189
           R+K     IE++            K  L  L      CDG+AA SY +FL  ++N+S AK
Sbjct: 62  RSK-----IEILT---------LQKPFLINLPAPIYVCDGAAAQSYTKFLHRRNNFSKAK 107

Query: 190 EVYQNIIQGATTIKNSGNPYLGAGNMNLEGLMMGAMCALGQLESHLGNF 238
           ++Y  +I+ AT +K  GN YLG  N+N+EGLM+  MCA  QL+S+L N+
Sbjct: 108 KIYNFLIKEATKLKERGNAYLGGANINIEGLMIQNMCAFEQLKSYLCNY 156


>Medtr2g093870.1 | hypothetical protein | LC |
           chr2:40021720-40017212 | 20130731
          Length = 238

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 3/81 (3%)

Query: 110 MASAVGDKCIELLEKQNAEDSEALKVRAKALKGLIELVKGNIES-AEAFFDKSLLSTLCD 168
           +ASAV DKCIEL+E +  +D EAL   A+ +KGL+ELVKG+I+S  E FFDKSL + LC 
Sbjct: 82  VASAVADKCIELVENKKTDDFEALNALARVIKGLVELVKGDIKSGTELFFDKSLRTKLC- 140

Query: 169 GSAALSYGEFLQTKHNYSMAK 189
            +A LSY EF QT+ NYSM K
Sbjct: 141 -TAPLSYVEFQQTRKNYSMVK 160


>Medtr7g062690.1 | TPR superfamily protein, putative | LC |
           chr7:22811716-22813159 | 20130731
          Length = 90

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 52/69 (75%), Gaps = 1/69 (1%)

Query: 316 VDRSDIAALARGAYSEVLSIQENRKDEGEKMKNFAEAIWRNHRMSLDDALGNTESNKVWV 375
           V RSDI ALA G   EVL+ Q+NRK E EK+KNFAEA+W+N +M LDD L NTE+N   V
Sbjct: 23  VKRSDILALAIGGCLEVLA-QKNRKSEEEKLKNFAEALWKNLKMYLDDFLENTEANICPV 81

Query: 376 IDARISRLL 384
           IDARI R+L
Sbjct: 82  IDARICRIL 90