Miyakogusa Predicted Gene
- Lj1g3v3444140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3444140.1 Non Characterized Hit- tr|I3SK84|I3SK84_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.68,0,NAD(P)-binding Rossmann-fold domains,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; NITROGEN METABOLIC RE,CUFF.30748.1
(313 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g062140.1 | NAD(P)-binding rossmann-fold protein | HC | ch... 478 e-135
Medtr4g021815.1 | NAD(P)-binding rossmann-fold protein | HC | ch... 404 e-113
Medtr8g010700.1 | NAD(P)-binding rossmann-fold protein | HC | ch... 85 7e-17
Medtr4g115730.1 | NAD-dependent epimerase/dehydratase family pro... 69 8e-12
Medtr4g115730.2 | NAD-dependent epimerase/dehydratase family pro... 67 3e-11
Medtr4g068970.1 | NAD-dependent epimerase/dehydratase family pro... 59 5e-09
Medtr4g005070.4 | high chlorophyll fluorescence phenotype 173 pr... 59 5e-09
Medtr4g005070.2 | high chlorophyll fluorescence phenotype 173 pr... 59 5e-09
Medtr4g005070.1 | high chlorophyll fluorescence phenotype 173 pr... 59 5e-09
Medtr4g005070.3 | high chlorophyll fluorescence phenotype 173 pr... 59 5e-09
Medtr4g005070.5 | high chlorophyll fluorescence phenotype 173 pr... 59 5e-09
Medtr8g010600.1 | NAD-dependent epimerase/dehydratase family pro... 55 1e-07
Medtr7g461370.1 | hypothetical protein | LC | chr7:22201749-2220... 52 5e-07
Medtr8g019510.1 | rossmann-fold NAD(P)-binding domain protein | ... 51 2e-06
Medtr8g019510.2 | rossmann-fold NAD(P)-binding domain protein | ... 51 2e-06
Medtr8g087310.2 | NAD(P)-binding rossmann-fold protein | HC | ch... 49 9e-06
>Medtr7g062140.1 | NAD(P)-binding rossmann-fold protein | HC |
chr7:22554242-22549588 | 20130731
Length = 329
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/326 (73%), Positives = 265/326 (81%), Gaps = 13/326 (3%)
Query: 1 MGMATRVPFVSAT-LSPNQCHKYCL----------PSSLKXXXXXXXXXXXXXXXATHKR 49
M TRVPFVSAT PNQCHKY L +SL+ + KR
Sbjct: 4 MATTTRVPFVSATTFFPNQCHKYSLVARTINLPVSSTSLRLSSCYSTSLVSLALPRSFKR 63
Query: 50 VRTRTSVV--AMADSSRSTVLVTGAGGRTGKIVYKKLQERSSQYIARGLVRTEESKQTIG 107
R SVV AMA+SS+STVLVTGAGGRTG+IVYKKL+ER ++YIARGLVR+EESKQ IG
Sbjct: 64 GGNRRSVVVVAMAESSKSTVLVTGAGGRTGQIVYKKLKERPNEYIARGLVRSEESKQKIG 123
Query: 108 ASDDVYVGDIRDTGSIAPAIQGIDALIILTSAVPLMKPGFNPTKGERPEFYFEDGAYPEQ 167
A+DDV++GDIRDT S+APAIQGIDALIILTS VPLMKPGF+PT+G+RPEFYFEDGAYPEQ
Sbjct: 124 AADDVFIGDIRDTESLAPAIQGIDALIILTSGVPLMKPGFDPTQGKRPEFYFEDGAYPEQ 183
Query: 168 VDWIGQKNQIDAAKAAGVKQIVLVGSMGGTDXXXXXXXXXXXXXXVWKRKAEQYLADSGI 227
VDWIGQKNQIDAAKAAGVKQIVLVGSMGGTD VWKRKAEQYLADSGI
Sbjct: 184 VDWIGQKNQIDAAKAAGVKQIVLVGSMGGTDLNHPLNSLGDGNILVWKRKAEQYLADSGI 243
Query: 228 PYTIIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQALNFEEAQFKAFD 287
PYTIIRAGGLQDKEGG+REL+IGKDDE+LKT+ RTIARPDVAEVC+QALNFEEAQFKAFD
Sbjct: 244 PYTIIRAGGLQDKEGGIRELVIGKDDELLKTDIRTIARPDVAEVCLQALNFEEAQFKAFD 303
Query: 288 LASKPEGAGTPTRDFKALFSQITTRF 313
LASKPEG G+PT+DFKALFSQITTRF
Sbjct: 304 LASKPEGTGSPTKDFKALFSQITTRF 329
>Medtr4g021815.1 | NAD(P)-binding rossmann-fold protein | HC |
chr4:7291813-7296445 | 20130731
Length = 255
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/255 (75%), Positives = 221/255 (86%)
Query: 59 MADSSRSTVLVTGAGGRTGKIVYKKLQERSSQYIARGLVRTEESKQTIGASDDVYVGDIR 118
MA SS++TVLVTGAGGRTG+IVYKKL+E+ QYIARGLVR+EESKQ IG +DD+++GDIR
Sbjct: 1 MAGSSQTTVLVTGAGGRTGQIVYKKLKEKRDQYIARGLVRSEESKQKIGGADDIFLGDIR 60
Query: 119 DTGSIAPAIQGIDALIILTSAVPLMKPGFNPTKGERPEFYFEDGAYPEQVDWIGQKNQID 178
+ SI PAIQG DALIILTSAVP MKPGF+PTKG RPEFYF+DGAYPEQVDWIGQKNQID
Sbjct: 61 NAESIVPAIQGTDALIILTSAVPQMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQID 120
Query: 179 AAKAAGVKQIVLVGSMGGTDXXXXXXXXXXXXXXVWKRKAEQYLADSGIPYTIIRAGGLQ 238
AAKAAGVK IVLVGSMGGT+ VWKRKAE+YL++SG+PYTIIR GGL
Sbjct: 121 AAKAAGVKHIVLVGSMGGTNPNHPLNSLGNGNILVWKRKAEEYLSNSGVPYTIIRPGGLL 180
Query: 239 DKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQALNFEEAQFKAFDLASKPEGAGTP 298
DKEGGVRELI+GKDDE+L+TET+TI R DVAEVC+Q LN+EE + KAFDLASKPEGAG P
Sbjct: 181 DKEGGVRELIVGKDDELLQTETKTIPRADVAEVCVQVLNYEETKLKAFDLASKPEGAGEP 240
Query: 299 TRDFKALFSQITTRF 313
T+DFKALFSQ+T+RF
Sbjct: 241 TKDFKALFSQLTSRF 255
>Medtr8g010700.1 | NAD(P)-binding rossmann-fold protein | HC |
chr8:2834119-2830976 | 20130731
Length = 324
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 41/239 (17%)
Query: 89 SQYIARGLVRTEESKQTIGASDD----VYVGDIRDTGSIAPAI-QGIDALIILTSAVPLM 143
S+ I R L E++K G D+ V+ GD R + P++ +G+ +I T
Sbjct: 100 SRLILRDL---EKAKALFGEQDEEKLQVFKGDTRKHDDLDPSMFEGVTHVICCTGTTAF- 155
Query: 144 KPGFNPTKGERPEFYFEDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTDXXXXX 203
P ++D PE+VDW+G KN + ++ VK+++LV S+G T
Sbjct: 156 -----------PSRRWDDENTPERVDWVGVKNLVSVLPSS-VKRVILVSSIGVTKCNELP 203
Query: 204 XXXXXXXXXV-WKRKAEQYLADSGIPYTIIRAGGLQD--------------KEGGVRELI 248
+ +K+ E++L +SG PYTIIR G L D G R ++
Sbjct: 204 WSIMNLFGVLKYKKMGEEFLQNSGFPYTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVL 263
Query: 249 IGKDDEILKTETRTIARPDVAEVCIQALNFEEAQFKAFDLAS-KPEGAGTPTRDFKALF 306
IG+ D+++ +R + VAE C+QAL+ E + + +++ S + EG G + ++ LF
Sbjct: 264 IGQGDKLVGEASRIV----VAEACVQALDLEATENQIYEVNSVEGEGPGNDAQKWQELF 318
>Medtr4g115730.1 | NAD-dependent epimerase/dehydratase family
protein | HC | chr4:47824137-47821684 | 20130731
Length = 292
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 36/262 (13%)
Query: 62 SSRSTVLVTGAGGRTGKIVYKKLQERSSQYIARGLVRTEESKQTIGASDD---VYVGDIR 118
S + V V GA G TGK + ++L + + G+ +++K ++ A+ V V
Sbjct: 56 SLKKKVFVAGATGSTGKRIVEQLLAKGFA-VKAGVRDLDKAKTSLSANPSLQFVKVDVTE 114
Query: 119 DTGSIAPAI-QGIDALIILTSAVPLMKPGFNPTKGERPEFYFEDGAYPEQVDWIGQKNQI 177
+ +A AI +A++ T +PG+ D P +VD G N +
Sbjct: 115 GSDKLAEAIGDDTEAVVCATG----FRPGW-------------DLLAPWKVDNFGTVNLV 157
Query: 178 DAAKAAGVKQIVLVGS-------MGGTDXXXXXXXXXXXXXXVWKRKAEQYLADSGIPYT 230
+A + V + +L+ S MG V K +AE ++ SGI YT
Sbjct: 158 EACRKVNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYT 217
Query: 231 IIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQALNFEEAQFKAFDLAS 290
IIR GGL++ + +++ +D + + +I+R VAEV +++L + EA +K ++ +
Sbjct: 218 IIRPGGLKN-DPPTGNVVMEPEDTLYEG---SISRDQVAEVAVESLAYPEASYKVVEIVA 273
Query: 291 KPEGAGTPTRDFKALFSQITTR 312
+P+ P R + LF I R
Sbjct: 274 RPDA---PKRAYHDLFGSIVQR 292
>Medtr4g115730.2 | NAD-dependent epimerase/dehydratase family
protein | HC | chr4:47824011-47821684 | 20130731
Length = 252
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 36/262 (13%)
Query: 62 SSRSTVLVTGAGGRTGKIVYKKLQERSSQYIARGLVRTEESKQTIGASDD---VYVGDIR 118
S + V V GA G TGK + ++L + + G+ +++K ++ A+ V V
Sbjct: 16 SLKKKVFVAGATGSTGKRIVEQLLAKGFA-VKAGVRDLDKAKTSLSANPSLQFVKVDVTE 74
Query: 119 DTGSIAPAI-QGIDALIILTSAVPLMKPGFNPTKGERPEFYFEDGAYPEQVDWIGQKNQI 177
+ +A AI +A++ T +PG+ D P +VD G N +
Sbjct: 75 GSDKLAEAIGDDTEAVVCATG----FRPGW-------------DLLAPWKVDNFGTVNLV 117
Query: 178 DAAKAAGVKQIVLVGS-------MGGTDXXXXXXXXXXXXXXVWKRKAEQYLADSGIPYT 230
+A + V + +L+ S MG V K +AE ++ SGI YT
Sbjct: 118 EACRKVNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYT 177
Query: 231 IIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQALNFEEAQFKAFDLAS 290
IIR GGL++ + +++ +D + + +I+R VAEV +++L + EA +K ++ +
Sbjct: 178 IIRPGGLKN-DPPTGNVVMEPEDTLYEG---SISRDQVAEVAVESLAYPEASYKVVEIVA 233
Query: 291 KPEGAGTPTRDFKALFSQITTR 312
+P+ P R + LF I R
Sbjct: 234 RPDA---PKRAYHDLFGSIVQR 252
>Medtr4g068970.1 | NAD-dependent epimerase/dehydratase family
protein | HC | chr4:25897576-25892682 | 20130731
Length = 641
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 165 PEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTDXXXXXXXXXXX-XXXVWKRKAEQYLA 223
P ++D++ KN +DAA A V +LV S+G WKRKAE+ L
Sbjct: 183 PYRIDYMATKNLVDAASVAKVNHFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALL 242
Query: 224 DSGIPYTIIRAGGLQDKEGGVRE 246
SG+PYTI+R GG++ +E
Sbjct: 243 ASGLPYTIVRPGGMERPTDAYKE 265
>Medtr4g005070.4 | high chlorophyll fluorescence phenotype 173
protein | HC | chr4:40284-46844 | 20130731
Length = 589
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 215 KRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQ 274
KR E L SG+ YTI+R G LQ++ GG R LI + D I +R I+ DVA++C++
Sbjct: 482 KRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRI----SRGISCADVADICVK 537
Query: 275 ALNFEEAQFKAFDLA 289
AL+ A+ K+FD+
Sbjct: 538 ALHDSTARNKSFDVC 552
>Medtr4g005070.2 | high chlorophyll fluorescence phenotype 173
protein | HC | chr4:40284-46779 | 20130731
Length = 589
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 215 KRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQ 274
KR E L SG+ YTI+R G LQ++ GG R LI + D I +R I+ DVA++C++
Sbjct: 482 KRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRI----SRGISCADVADICVK 537
Query: 275 ALNFEEAQFKAFDLA 289
AL+ A+ K+FD+
Sbjct: 538 ALHDSTARNKSFDVC 552
>Medtr4g005070.1 | high chlorophyll fluorescence phenotype 173
protein | HC | chr4:40284-46844 | 20130731
Length = 589
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 215 KRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQ 274
KR E L SG+ YTI+R G LQ++ GG R LI + D I +R I+ DVA++C++
Sbjct: 482 KRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRI----SRGISCADVADICVK 537
Query: 275 ALNFEEAQFKAFDLA 289
AL+ A+ K+FD+
Sbjct: 538 ALHDSTARNKSFDVC 552
>Medtr4g005070.3 | high chlorophyll fluorescence phenotype 173
protein | HC | chr4:40284-46844 | 20130731
Length = 589
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 215 KRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQ 274
KR E L SG+ YTI+R G LQ++ GG R LI + D I +R I+ DVA++C++
Sbjct: 482 KRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRI----SRGISCADVADICVK 537
Query: 275 ALNFEEAQFKAFDLA 289
AL+ A+ K+FD+
Sbjct: 538 ALHDSTARNKSFDVC 552
>Medtr4g005070.5 | high chlorophyll fluorescence phenotype 173
protein | HC | chr4:40284-46844 | 20130731
Length = 589
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 215 KRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQ 274
KR E L SG+ YTI+R G LQ++ GG R LI + D I +R I+ DVA++C++
Sbjct: 482 KRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRI----SRGISCADVADICVK 537
Query: 275 ALNFEEAQFKAFDLA 289
AL+ A+ K+FD+
Sbjct: 538 ALHDSTARNKSFDVC 552
>Medtr8g010600.1 | NAD-dependent epimerase/dehydratase family
protein | HC | chr8:2790527-2789721 | 20130731
Length = 134
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 19/108 (17%)
Query: 214 WKRKAEQYLADSGIPYTIIRAGGLQD--------------KEGGVRELIIGKDDEILKTE 259
+K+ E++L +SG PYTII+ G L D G R ++IG+ D+++
Sbjct: 25 YKKMGEEFLQNSGFPYTIIKPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEA 84
Query: 260 TRTIARPDVAEVCIQALNFEEAQFKAFDLAS-KPEGAGTPTRDFKALF 306
+R + VAE C+QAL+ E + + +++ S + EG G + ++ LF
Sbjct: 85 SRIV----VAEACVQALDLEVTENQIYEVNSVEGEGPGNDAQKWQELF 128
>Medtr7g461370.1 | hypothetical protein | LC |
chr7:22201749-22204773 | 20130731
Length = 206
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 61 DSSRSTVLVTGAGGRTGKIVYKKLQERSSQYIARGLVRTEESKQTIGASDDVYVGDIRDT 120
D R+ V G G I RS++ I + L+R R+
Sbjct: 78 DDVRTMFSVFGQHNTRGPIKLDASLVRSAEQIKKSLIRP------------------RNY 119
Query: 121 GSIAPAIQGIDALIILTSAVPLMKPGFNPTKGERPEFYFEDGAYPEQVDWIGQKN 175
I ++G + AVPL KPG +PT+G+RPEF F+D A+P+Q +I +KN
Sbjct: 120 EEIRALLEGPEEEHFHRHAVPLRKPGCDPTQGKRPEFDFDDDAFPKQ-HFIIEKN 173
>Medtr8g019510.1 | rossmann-fold NAD(P)-binding domain protein | HC
| chr8:6876130-6872011 | 20130731
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 184 GVKQIVLVGSMGGTDXXXXXXXXXXXXXXVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG 243
GVK +VL+ + + E L SGIPYTIIR G LQD GG
Sbjct: 182 GVKHVVLLSQLSVYSGKTGIESMMKNNAKKLAEQDESVLRSSGIPYTIIRTGELQDTPGG 241
Query: 244 VRELIIGKDDEILKTETRTIARPDVAEVCIQALNFEEAQFKAFDLAS 290
+ K T +I++ DVA VC++AL F F++A+
Sbjct: 242 KQGFTFDKG----VAATGSISKEDVAFVCVKALEFVPQTGLIFEVAN 284
>Medtr8g019510.2 | rossmann-fold NAD(P)-binding domain protein | HC
| chr8:6876124-6872336 | 20130731
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 184 GVKQIVLVGSMGGTDXXXXXXXXXXXXXXVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG 243
GVK +VL+ + + E L SGIPYTIIR G LQD GG
Sbjct: 156 GVKHVVLLSQLSVYSGKTGIESMMKNNAKKLAEQDESVLRSSGIPYTIIRTGELQDTPGG 215
Query: 244 VRELIIGKDDEILKTETRTIARPDVAEVCIQALNFEEAQFKAFDLAS 290
+ K T +I++ DVA VC++AL F F++A+
Sbjct: 216 KQGFTFDKG----VAATGSISKEDVAFVCVKALEFVPQTGLIFEVAN 258
>Medtr8g087310.2 | NAD(P)-binding rossmann-fold protein | HC |
chr8:36100665-36095176 | 20130731
Length = 597
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 67 VLVTGAGGRTGKIVYKKLQERSSQYIARGLVRTEE-SKQTIGASDDVYVGDI-RDTGSIA 124
VLV GA G G+ V +L+++ R LVR EE +++ +G+ D+ +GDI +D+ I
Sbjct: 126 VLVAGATGGVGRRVVDELRKKGIP--VRVLVRNEEKARKMLGSDVDLVIGDITKDSTLIP 183
Query: 125 PAIQGIDALIILTSAVPLMKPGFNPTKGERPE--FYFE---DGAYPEQVDWIGQKNQIDA 179
+G+ +I S + K G P + + + +FE G PE+V++IG +N I A
Sbjct: 184 EYFKGVKKVINAVSVIVGPKEGDTPDRAKYSQGIKFFEPEVKGDSPEKVEYIGMRNLIKA 243
Query: 180 AK 181
K
Sbjct: 244 VK 245