Miyakogusa Predicted Gene

Lj1g3v3443700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3443700.1 Non Characterized Hit- tr|K4BML8|K4BML8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,51.69,2e-19,no
description,Dynein light chain, type 1/2; Dynein_light,Dynein light
chain, type 1/2; SUBFAMILY NO,CUFF.30718.1
         (113 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g087770.1 | cytoplasmic dynein light chain | HC | chr6:330...   105   1e-23
Medtr2g101850.1 | cytoplasmic dynein light chain | HC | chr2:438...    96   7e-21
Medtr8g464690.1 | dynein light chain type 1 family protein | HC ...    93   6e-20
Medtr4g114060.2 | dynein light chain type 1 family protein | HC ...    75   1e-14
Medtr4g114060.1 | dynein light chain type 1 family protein | HC ...    75   1e-14
Medtr8g104900.1 | dynein light chain type 1 family protein | HC ...    67   3e-12
Medtr4g107350.1 | dynein light chain type 1 family protein | HC ...    64   2e-11
Medtr1g031880.1 | dynein light chain type 1 family protein | HC ...    64   2e-11
Medtr4g120150.1 | dynein light chain type 1 family protein | HC ...    64   2e-11

>Medtr6g087770.1 | cytoplasmic dynein light chain | HC |
          chr6:33030451-33029408 | 20130731
          Length = 93

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 65/89 (73%)

Query: 1  MLEGKGVVRETDMPEEMQNHVMEFAHQALDAHEVSDCQSISHFIKQKLDEAYGPAWNSVV 60
          MLEGKGVV ETDMP +MQ   M +A QALD ++V DC+SI+ +IK++ D+ YG  W  VV
Sbjct: 1  MLEGKGVVEETDMPLKMQIQAMSYASQALDLYDVCDCRSIAGYIKKEFDKNYGSRWQCVV 60

Query: 61 GKDFGSCITYLSGSFIFFHVEMMEFLIFK 89
          G +FG   ++  G+FI+F +E ++FLI+K
Sbjct: 61 GSNFGCFFSHTPGTFIYFSLETLKFLIYK 89


>Medtr2g101850.1 | cytoplasmic dynein light chain | HC |
          chr2:43819163-43818213 | 20130731
          Length = 91

 Score = 95.9 bits (237), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 60/89 (67%)

Query: 1  MLEGKGVVRETDMPEEMQNHVMEFAHQALDAHEVSDCQSISHFIKQKLDEAYGPAWNSVV 60
          MLEGK ++ +TDMP +MQ   M +A +ALD ++V DC+SI+  IK++ D  YG  W  VV
Sbjct: 1  MLEGKAMIEDTDMPTKMQIQAMAYASEALDLYDVIDCKSIAAHIKKEFDARYGGGWQCVV 60

Query: 61 GKDFGSCITYLSGSFIFFHVEMMEFLIFK 89
          G  FG   T+  G+FI+F +E + FLIFK
Sbjct: 61 GSSFGCFFTHSKGTFIYFTLETLNFLIFK 89


>Medtr8g464690.1 | dynein light chain type 1 family protein | HC |
          chr8:22911007-22910269 | 20130731
          Length = 109

 Score = 92.8 bits (229), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 60/89 (67%)

Query: 1  MLEGKGVVRETDMPEEMQNHVMEFAHQALDAHEVSDCQSISHFIKQKLDEAYGPAWNSVV 60
          MLEGK V+ ETDM + MQ   ++ A +ALD ++V++   I+ FIK++ D  +GP W  +V
Sbjct: 1  MLEGKAVIGETDMLQTMQQDALDLACKALDFYDVTEAIDIARFIKKEFDRVHGPGWQCIV 60

Query: 61 GKDFGSCITYLSGSFIFFHVEMMEFLIFK 89
          G DFGS +T+ SG FI+F +  M  L+FK
Sbjct: 61 GTDFGSFVTHCSGCFIYFCIGSMAILLFK 89


>Medtr4g114060.2 | dynein light chain type 1 family protein | HC |
           chr4:46940344-46937870 | 20130731
          Length = 245

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 51/79 (64%)

Query: 11  TDMPEEMQNHVMEFAHQALDAHEVSDCQSISHFIKQKLDEAYGPAWNSVVGKDFGSCITY 70
           +DMP  MQ H    A +  D+ E    + I+H IK++ D+AYGPAW+ +VG  FGS +T+
Sbjct: 159 SDMPSFMQVHAFRCARRTYDSLEEFSSKHIAHNIKKEFDKAYGPAWHCIVGPSFGSFVTH 218

Query: 71  LSGSFIFFHVEMMEFLIFK 89
            +G F++F +E +  L+FK
Sbjct: 219 STGCFLYFSMENLYILLFK 237


>Medtr4g114060.1 | dynein light chain type 1 family protein | HC |
           chr4:46940344-46937870 | 20130731
          Length = 245

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 51/79 (64%)

Query: 11  TDMPEEMQNHVMEFAHQALDAHEVSDCQSISHFIKQKLDEAYGPAWNSVVGKDFGSCITY 70
           +DMP  MQ H    A +  D+ E    + I+H IK++ D+AYGPAW+ +VG  FGS +T+
Sbjct: 159 SDMPSFMQVHAFRCARRTYDSLEEFSSKHIAHNIKKEFDKAYGPAWHCIVGPSFGSFVTH 218

Query: 71  LSGSFIFFHVEMMEFLIFK 89
            +G F++F +E +  L+FK
Sbjct: 219 STGCFLYFSMENLYILLFK 237


>Medtr8g104900.1 | dynein light chain type 1 family protein | HC |
           chr8:44226350-44232514 | 20130731
          Length = 133

 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)

Query: 8   VRETDMPEEMQNHVMEFAHQALDAHEVSDCQS--ISHFIKQKLDEAYGPAWNSVVGKDFG 65
           +R  DMP  +QNH    A   LD+       +  ++  +K++ D  YGPAW+ +VG  FG
Sbjct: 41  IRACDMPLTLQNHAFRCARHLLDSMPPKKLHTKRLALTLKKEFDSTYGPAWHCIVGTSFG 100

Query: 66  SCITYLSGSFIFFHVEMMEFLIFK 89
           S +T+  G F++F ++ +  L+FK
Sbjct: 101 SYVTHSVGGFLYFSIDKVHILLFK 124


>Medtr4g107350.1 | dynein light chain type 1 family protein | HC |
           chr4:44373665-44370969 | 20130731
          Length = 307

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)

Query: 12  DMPEEMQNHVMEFAHQALDAHEVSDCQSISHFIKQKLDEAYGPAWNSVVGKDFGSCITYL 71
           DMP  MQ H ++ A +A D+ E    ++++  +K++ D  YGPAW+ +VG  FGS +T+ 
Sbjct: 222 DMPPFMQIHAVDCARKAFDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHS 281

Query: 72  SGSFIFFHVEM-MEFLIFK 89
            G F++F ++  +  LIFK
Sbjct: 282 VGGFLYFSMDQKLYILIFK 300


>Medtr1g031880.1 | dynein light chain type 1 family protein | HC |
           chr1:11198739-11201405 | 20130731
          Length = 146

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 8   VRETDMPEEMQNHVMEFAHQALDAHEV--SDCQSISHFIKQKLDEAYGPAWNSVVGKDFG 65
           V+  DM   +Q H  +FA   LD+      D + ++  +K++ D  YGPAW+ +VG  FG
Sbjct: 55  VKACDMSLPLQKHAFQFARDHLDSMPTKKPDSKHLALSLKKEFDSCYGPAWHCIVGTSFG 114

Query: 66  SCITYLSGSFIFFHVEMMEFLIFKDG 91
           S +T+  G F++F ++ +  L+F+  
Sbjct: 115 SYVTHSVGGFVYFSIDKVHILLFRTA 140


>Medtr4g120150.1 | dynein light chain type 1 family protein | HC |
           chr4:49807388-49810451 | 20130731
          Length = 130

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 5   KGVVRETDMPEEMQNHVMEFAHQALDAHEVSDCQSISHFIKQKLDEAYGPAWNSVVGKDF 64
           K +++  DM  +MQ   ++ A  A + H V   + ++  IK++ D+ +GP W+ +VG++F
Sbjct: 46  KVIIKSADMLPDMQKEAVDIAVVAFERHNVE--KDVAETIKKEFDKRHGPTWHCIVGRNF 103

Query: 65  GSCITYLSGSFIFFHVEMMEFLIFKDG 91
           GS +T+ +  F++F+++    L+FK G
Sbjct: 104 GSYVTHETNHFVYFYLDQKAVLLFKSG 130