Miyakogusa Predicted Gene

Lj1g3v3442640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3442640.1 Non Characterized Hit- tr|K3XNA8|K3XNA8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si003381,53.66,3e-19,Plant lipid transfer protein / seed
storage,Bifunctional inhibitor/plant lipid transfer
protein/seed,CUFF.30747.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g065210.1 | Lipid transfer protein | HC | chr7:23779449-23...   175   8e-45
Medtr7g065160.1 | Lipid transfer protein | HC | chr7:23755721-23...   174   1e-44
Medtr8g070040.1 | Lipid transfer protein | HC | chr8:29724580-29...    99   7e-22
Medtr8g070015.1 | Lipid transfer protein | HC | chr8:29706500-29...    84   2e-17
Medtr1g103450.1 | Lipid transfer protein | HC | chr1:46824422-46...    48   2e-06

>Medtr7g065210.1 | Lipid transfer protein | HC |
           chr7:23779449-23778354 | 20130731
          Length = 117

 Score =  175 bits (444), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 80/101 (79%), Positives = 92/101 (91%)

Query: 20  ISEIQSVEAAGECGRSTTPDNEAMKLIPCASAAQDENASVSQSCCAQVQKIGKNPSCLCA 79
           ++ I SVE+AGECGR TTPD EA KL PCASAAQDENASVSQ+CCAQ +K+G+NPSCLCA
Sbjct: 17  VAGIHSVESAGECGRGTTPDMEAFKLAPCASAAQDENASVSQTCCAQTKKLGQNPSCLCA 76

Query: 80  VVLSNMAKMSGVNPKIAITIPKRCNLDNRPIGYKCGPYTLP 120
           V+LSN+AKMSGVNP+IA+TIPKRCN  NRP+GYKCGPYTLP
Sbjct: 77  VLLSNVAKMSGVNPQIAVTIPKRCNFANRPVGYKCGPYTLP 117


>Medtr7g065160.1 | Lipid transfer protein | HC |
           chr7:23755721-23754468 | 20130731
          Length = 117

 Score =  174 bits (442), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 80/101 (79%), Positives = 93/101 (92%)

Query: 20  ISEIQSVEAAGECGRSTTPDNEAMKLIPCASAAQDENASVSQSCCAQVQKIGKNPSCLCA 79
           ++    VE+AGECGR TTPDNEA KLIPCASAA+DENASVSQSCCAQV+K+G+NPSCLCA
Sbjct: 17  VAGTHRVESAGECGRGTTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKLGQNPSCLCA 76

Query: 80  VVLSNMAKMSGVNPKIAITIPKRCNLDNRPIGYKCGPYTLP 120
           V+LSN+AKMSG NP+IA+TIPKRCNL +RP+GYKCGPYTLP
Sbjct: 77  VMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP 117


>Medtr8g070040.1 | Lipid transfer protein | HC |
           chr8:29724580-29725448 | 20130731
          Length = 120

 Score = 99.4 bits (246), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 1   MESHIKXXXXXXXXXXXXSISEIQSVEAAGECGRSTTPDNEAMKLIPCASAAQDENASVS 60
           ME  ++            S   I   EAAGECGR T   + A  L PC  A ++  A V 
Sbjct: 1   MEFKVRTFLATVVMFLLASSVFILESEAAGECGR-TPIGSAAASLSPCLGAVRNVRAKVP 59

Query: 61  QSCCAQVQKIGK-NPSCLCAVVLSNMAKMSGVNPKIAITIPKRCNLDNRPIGYKCGPYTL 119
             CCA+V  + + +P CLC+V+LS +AK + +NP IAIT+PKRCN+ NRP G KCG YTL
Sbjct: 60  PVCCARVGALLRTSPRCLCSVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGRYTL 119

Query: 120 P 120
           P
Sbjct: 120 P 120


>Medtr8g070015.1 | Lipid transfer protein | HC |
           chr8:29706500-29707286 | 20130731
          Length = 113

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 2/114 (1%)

Query: 1   MESHIKXXXXXXXXXXXXSISEIQSVEAAGECGRSTTPDNEAMKLIPCASAAQDENASVS 60
           ME  ++            S   I   EA GECGR T   + A  L PC  A ++  A V 
Sbjct: 1   MEFKVRTFLATVVMFLLASSVFILESEAGGECGR-TPIGSAAASLSPCLGAVRNVRAKVP 59

Query: 61  QSCCAQVQKIGK-NPSCLCAVVLSNMAKMSGVNPKIAITIPKRCNLDNRPIGYK 113
             CCA+V  + + +P CLC+V+LS +AK + +NP IAIT+PKRCN+ NRP G K
Sbjct: 60  PVCCARVGALLRTSPRCLCSVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKK 113


>Medtr1g103450.1 | Lipid transfer protein | HC |
           chr1:46824422-46825180 | 20130731
          Length = 154

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 43  MKLIPCASAAQDENASVSQSCCAQVQKIGKN-PSCLCAVVLSNMAKMSGVNPKIAITIPK 101
           M L+PC    +  + + +  CC Q+  + K+ P CLC ++ S++    G+N  +A+ +P 
Sbjct: 33  MSLMPCLGYVRGNSPTPTAGCCTQLANVVKSQPECLCLIIGSDLGSSLGINKTLALALPA 92

Query: 102 RCNLDNRPI 110
            CN++  P+
Sbjct: 93  ACNVETPPV 101