Miyakogusa Predicted Gene

Lj1g3v3407640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3407640.1 tr|I1K778|I1K778_SOYBN Coatomer subunit gamma
OS=Glycine max PE=3 SV=1,96.25,0,no description,Armadillo-like
helical; Adaptin_N,Clathrin/coatomer adaptor, adaptin-like,
N-terminal,CUFF.30750.1
         (241 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g116480.1 | coatomer subunit gamma-like protein | HC | chr...   475   e-134
Medtr4g069920.1 | coatomer subunit gamma-like protein | HC | chr...   451   e-127

>Medtr3g116480.1 | coatomer subunit gamma-like protein | HC |
           chr3:54482735-54492107 | 20130731
          Length = 887

 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/241 (94%), Positives = 234/241 (97%)

Query: 1   MAQPFMKKDDDRDDEVEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60
           MAQP +KKDDDRDDE EYSPF+GIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG
Sbjct: 1   MAQPLVKKDDDRDDEAEYSPFMGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID 120
           ETFTK EATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID
Sbjct: 61  ETFTKTEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID 120

Query: 121 MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPVVASAALISGIHLLHTNPEIVKRWS 180
           MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNP+VASAAL+SGIHLL TNPEIVKRWS
Sbjct: 121 MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPIVASAALVSGIHLLQTNPEIVKRWS 180

Query: 181 NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPIAQCLLIRYTSQ 240
           NEVQE+VQSRAA VQFHAL LLHQIRQNDRLAVSKLV+SLTRG VRSP+AQCLLIRYTSQ
Sbjct: 181 NEVQESVQSRAAFVQFHALGLLHQIRQNDRLAVSKLVSSLTRGAVRSPLAQCLLIRYTSQ 240

Query: 241 V 241
           V
Sbjct: 241 V 241


>Medtr4g069920.1 | coatomer subunit gamma-like protein | HC |
           chr4:26297688-26305339 | 20130731
          Length = 885

 Score =  451 bits (1160), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/241 (93%), Positives = 235/241 (97%)

Query: 1   MAQPFMKKDDDRDDEVEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60
           MAQP +KKDDDRDDE  YSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG
Sbjct: 1   MAQPLIKKDDDRDDEDNYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID 120
           ETFTKVEATEVFF+VTKLFQS+D+GLRRMVYL+IKE+SPSADEVIIVTSSLMKDMNSK D
Sbjct: 61  ETFTKVEATEVFFSVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTD 120

Query: 121 MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPVVASAALISGIHLLHTNPEIVKRWS 180
           MYRANAIRVLCRITDGTLL QIERYLKQAIVDKNPVVASAAL+SGIHLL TNPEIVKRWS
Sbjct: 121 MYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWS 180

Query: 181 NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPIAQCLLIRYTSQ 240
           NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRG+VRSP+AQCLLIRYTSQ
Sbjct: 181 NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCLLIRYTSQ 240

Query: 241 V 241
           V
Sbjct: 241 V 241