Miyakogusa Predicted Gene
- Lj1g3v3404340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3404340.1 tr|G7J6G8|G7J6G8_MEDTR SWI/SNF complex subunit
SMARCC2 OS=Medicago truncatula GN=MTR_3g116120 PE=4
S,71.08,0,PREDICTED PROTEIN,NULL; SWI/SNF COMPLEX-RELATED,NULL;
SWIRM,SWIRM domain; Myb_DNA-binding,SANT/Myb d,CUFF.30634.1
(476 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g116120.1 | SWI/SNF complex subunit SWI3B-like protein | H... 621 e-178
Medtr5g085170.1 | SWI/SNF complex subunit SWI3B-like protein | H... 574 e-164
Medtr6g053260.1 | F-box and associated interaction domain protei... 280 2e-75
Medtr3g099000.2 | SWI/SNF complex protein | HC | chr3:45370551-4... 174 2e-43
Medtr3g099000.1 | SWI/SNF complex protein | HC | chr3:45370551-4... 174 2e-43
Medtr3g088480.1 | SWI/SNF complex protein | HC | chr3:40113660-4... 132 5e-31
Medtr4g069830.1 | SWI/SNF complex subunit SWI3D | HC | chr4:2625... 120 3e-27
Medtr4g069830.2 | SWI/SNF complex subunit SWI3D | HC | chr4:2625... 120 3e-27
>Medtr3g116120.1 | SWI/SNF complex subunit SWI3B-like protein | HC |
chr3:54294108-54291302 | 20130731
Length = 483
Score = 621 bits (1602), Expect = e-178, Method: Compositional matrix adjust.
Identities = 307/444 (69%), Positives = 359/444 (80%), Gaps = 23/444 (5%)
Query: 45 PKLSATPDANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSSSKSPRVYKYYRNSIIKYFR 104
P+ + DAN+ILVPSHSRWFSWDSIH+CE+R++PE SSK+PRVYKYYRNSI+K+FR
Sbjct: 46 PEAKTSSDANLILVPSHSRWFSWDSIHECEIRNIPE----SSKNPRVYKYYRNSIVKFFR 101
Query: 105 YNPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDDKDTKVDSA 164
+NPNRKITFTDVRK LVGDVGSIRRVF+FLEAWGLINYHPSSS SKP KW+DKDTK D+A
Sbjct: 102 FNPNRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYHPSSSLSKPLKWEDKDTKPDAA 161
Query: 165 E-----PPPPPVRETAKRVCSGCKALCTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDF 219
P P PV+E AKR+CSGCK LC +ACF C+K ++TLCARC++RGNYR+G+S+++F
Sbjct: 162 SNSAESPSPAPVKE-AKRICSGCKNLCVMACFACEKNNMTLCARCFIRGNYRIGMSNTEF 220
Query: 220 KRVEISXXXXXXXXXXXXLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQF 279
KRVEIS LNL+EAI+++GDDWKRV+HQVVGRT+KECVA FL+LPFG+QF
Sbjct: 221 KRVEISEETKNEWTEKETLNLLEAITNFGDDWKRVAHQVVGRTDKECVARFLELPFGDQF 280
Query: 280 L------GSAVSDDGC-ELKQHAD---ESETVASAESNKRMRLTPLADASNPIMAQAAFL 329
L + DDG +LK ESETV S +S+KRM LTPLADASNPIMAQAAFL
Sbjct: 281 LHYPHSESAPCIDDGSDQLKPPVAAECESETVPSDKSSKRMCLTPLADASNPIMAQAAFL 340
Query: 330 SALAGPEVXXXXXXXXXXXXSDVYKSTRINYRSLPKNTLQQDAGVASNGGNNSDSLQGAR 389
SALAG EV S+VYKSTRINYRS P+NTLQQDA VASNGGN SDS+QG+
Sbjct: 341 SALAGTEVAQAAAQAALTSLSNVYKSTRINYRSFPRNTLQQDAAVASNGGNASDSIQGSL 400
Query: 390 LNASLQLEKDESDVEKAISEIIEVQMKNIQDKLVHFEDLDLLMEKERQQLEQTKNMFFLD 449
L A+LQLEK+ESDVEKAISE+ EVQMKNIQDKL++FEDLD+LMEKERQQLEQTK++FFLD
Sbjct: 401 LRANLQLEKEESDVEKAISEVTEVQMKNIQDKLINFEDLDVLMEKERQQLEQTKSLFFLD 460
Query: 450 QLTLLFQKPSAPKTGEYPQGNHVK 473
QL LLF+K SAP TGE GNHVK
Sbjct: 461 QLNLLFRKTSAPTTGE---GNHVK 481
>Medtr5g085170.1 | SWI/SNF complex subunit SWI3B-like protein | HC |
chr5:36752674-36753975 | 20130731
Length = 433
Score = 574 bits (1479), Expect = e-164, Method: Compositional matrix adjust.
Identities = 292/446 (65%), Positives = 341/446 (76%), Gaps = 37/446 (8%)
Query: 41 PPSE----PKLSATPDANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSSSKSPRVYKYYR 96
PPS P+ + DAN+ILVPSHSRWFSWDSIH+CE+R++PE SSK+PRVYKYYR
Sbjct: 12 PPSSAIETPQPITSSDANLILVPSHSRWFSWDSIHECEIRNIPE----SSKNPRVYKYYR 67
Query: 97 NSIIKYFRYNPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDD 156
NSI+K+FR+NPNRKITFTDVRK++VGDVGSIRRVF+FLEAWGLINYHPSSS SKP KW+D
Sbjct: 68 NSIVKFFRFNPNRKITFTDVRKIIVGDVGSIRRVFDFLEAWGLINYHPSSSLSKPLKWED 127
Query: 157 KDTKVDSAE-----PPPPPVRETAKRVCSGCKALCTIACFVCDKYDLTLCARCYVRGNYR 211
KD K D+A P P E AKR+CS C + CF CDK + LCARC++RGNYR
Sbjct: 128 KDAKSDAASNSTESPSLVPANE-AKRICSVC-----MDCFACDKNNRKLCARCFIRGNYR 181
Query: 212 VGVSSSDFKRVEISXXXXXXXXXXXXLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFL 271
+G+S++ FKRVEIS LNL+EAI+++GDDWKRVSHQVVGRT+KECVA FL
Sbjct: 182 IGMSNTKFKRVEISEETKNEWTEEETLNLLEAITNFGDDWKRVSHQVVGRTDKECVARFL 241
Query: 272 KLPFGEQFLGSAVSDDGCELKQHAD---ESETVASAESNKRMRLTPLADASNPIMAQAAF 328
+LPFG+Q LK D ESE V S +S+KRM LTPL DA NPIMAQAAF
Sbjct: 242 ELPFGDQ------------LKPPVDAEWESEIVGSGKSSKRMCLTPLNDAINPIMAQAAF 289
Query: 329 LSALAGPEVXXXXXXXXXXXXSDVYKSTRINYRSLPKNTLQQDAGVASNGGNNSDSLQGA 388
LSALAG EV S VYKSTRINYRS P+NTLQQDA VAS+GGN SDS+QG+
Sbjct: 290 LSALAGTEVAQAAAQAALTSLSIVYKSTRINYRSFPRNTLQQDASVASDGGNASDSIQGS 349
Query: 389 RLNASLQLEKDESDVEKAISEIIEVQMKNIQDKLVHFEDLDLLMEKERQQLEQTKNMFFL 448
L A+LQLEK+ESDVEK I E+I+VQMKNIQDKL++FEDLD+LMEKERQQLEQTK++FFL
Sbjct: 350 LLRANLQLEKEESDVEKDIYEVIDVQMKNIQDKLINFEDLDVLMEKERQQLEQTKSLFFL 409
Query: 449 DQLTLLFQKPSAPKTGEYPQGNHVKT 474
DQL LLF+K SAP TGE GNHVK+
Sbjct: 410 DQLNLLFRKTSAPTTGE---GNHVKS 432
>Medtr6g053260.1 | F-box and associated interaction domain protein |
LC | chr6:19123038-19126671 | 20130731
Length = 708
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 169/238 (71%), Gaps = 38/238 (15%)
Query: 42 PSEPKLSATPDANVILVPSHSRWFSWDSIHQCEVRHLPEFFDSSSKSPRVYKYYRNSIIK 101
P +PK S+ D N+ILVPSHSRWFSWDSIH+CE+R++PE SSK+PRVYKYYRNSI+K
Sbjct: 19 PPKPKTSS--DGNLILVPSHSRWFSWDSIHECEIRNIPE----SSKNPRVYKYYRNSIVK 72
Query: 102 YFRYNPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFSKPFKWDDKDTKV 161
+FR+NPNRKITFTDVRK LVGDVGSIRRVF+FLE WGLINYHPSSS SK +
Sbjct: 73 FFRFNPNRKITFTDVRKTLVGDVGSIRRVFDFLEDWGLINYHPSSSLSK------SEAAS 126
Query: 162 DSAEPPPPPVRETAKRVCSGCKALCTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDFKR 221
+S E P ++TLC RC++ GNYR+G+S+++FKR
Sbjct: 127 NSTESP--------------------------SLNNMTLCVRCFICGNYRIGMSNTEFKR 160
Query: 222 VEISXXXXXXXXXXXXLNLVEAISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQF 279
VEIS LNL+EAI+++GDDWKRVSHQVVGRT+KECVA FL+LPFG+Q
Sbjct: 161 VEISEETKKEWTEEETLNLLEAITNFGDDWKRVSHQVVGRTDKECVARFLELPFGDQL 218
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 93/104 (89%), Gaps = 3/104 (2%)
Query: 369 QQDAGVASNGGNNSDSLQGARLNASLQLEKDESDVEKAISEIIEVQMKNIQDKLVHFEDL 428
+QDA V S+GGN SDS+QG+ L+A+LQLEK+ESDVEKAISE+IEVQMKNIQDKL++FEDL
Sbjct: 234 RQDASVTSDGGNASDSIQGSLLDANLQLEKEESDVEKAISEVIEVQMKNIQDKLINFEDL 293
Query: 429 DLLMEKERQQLEQTKNMFFLDQLTLLFQKPSAPKTGEYPQGNHV 472
D+LMEKERQQLEQTK++FFLDQL LLF+K SAP T E GNH+
Sbjct: 294 DVLMEKERQQLEQTKSLFFLDQLNLLFRKTSAPTTEE---GNHL 334
>Medtr3g099000.2 | SWI/SNF complex protein | HC |
chr3:45370551-45376366 | 20130731
Length = 540
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 226/527 (42%), Gaps = 125/527 (23%)
Query: 58 VPSHSRWFSWDSIHQCEVRHLPEFFDSSS--KSPRVYKYYRNSIIKYFRYNPNRKITFTD 115
+PS S+WF+WD IH+ E E+FD +S ++P++YK YR+ II +R P+R++TFT+
Sbjct: 18 IPSSSKWFAWDEIHETEKTAFKEYFDGTSITRTPKIYKEYRDFIINKYREEPSRRLTFTE 77
Query: 116 VRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFS--KPFKWDDKD-TKVDSAEPPPPPVR 172
VRK LVGDV + +VF FLE WGLINY S+ + + K +K+ K+ E P +R
Sbjct: 78 VRKSLVGDVTFLNKVFLFLECWGLINYGAPSAGNDGEAEKEHEKERCKLKVEEGAPNGIR 137
Query: 173 ETA-------------KRVCSG----------------------------------CKAL 185
A ++ +G C
Sbjct: 138 VVATPNSLKPISLPRDTKIAAGGGDESGAGVKIAPLASYSDVYGDLIRRKEVNCGNCGDK 197
Query: 186 CTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDFK---RVEISXXXXXXXXXXXXLNLVE 242
C + K + +C +C+ GNY S DFK EIS L L+E
Sbjct: 198 CGSGHYRSTKDNFIICTKCFKNGNYGEKRSMEDFKLNESSEISANHSAVWTEGETLLLLE 257
Query: 243 AISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGSA------------------- 283
++ +GDDW+ V+ V +T+ EC++ ++LPFGE L S
Sbjct: 258 SVLKHGDDWELVAQSVRTKTKLECISKLIELPFGELMLASVRRNDNSNSVTGIVNNRNQV 317
Query: 284 ------------VSDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSA 331
D E K +++ + +KR R++ L+D+S+ +M Q LS
Sbjct: 318 QVSSSDHQETSMTQDQSSEPKNEVEQNGDAVNENPSKRRRVSTLSDSSSSLMKQVGLLST 377
Query: 332 LAGPEVXXXXXXXXXXXXSDVYKSTRINYRSLPKNTLQQDAGVASNGGNNSDSLQ----- 386
+ P V D SLP++ + AS ++ L+
Sbjct: 378 VVDPHVTAAAASAAITALCD--------ENSLPRDIFDVEEDNASARALEAEGLEMVEGS 429
Query: 387 -------------------GARLNAS-----LQLEKDESDVEKAISEIIEVQMKNIQDKL 422
G L A+ L ++++ ++E ++ IIE Q++ +Q K+
Sbjct: 430 TQSEVKDDIPLTLRIRAAIGTALGATAARAKLLADQEDREIEHLVATIIEAQVEKLQQKV 489
Query: 423 VHFEDLDLLMEKERQQLEQTKNMFFLDQLTLLFQ--KPSAPKTGEYP 467
HF++L+LLMEKE ++E+ K+ +++ +L + K + YP
Sbjct: 490 KHFDELELLMEKEHAEMEELKDSILTERIDVLRKTFKSGVARWKHYP 536
>Medtr3g099000.1 | SWI/SNF complex protein | HC |
chr3:45370551-45376390 | 20130731
Length = 540
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 226/527 (42%), Gaps = 125/527 (23%)
Query: 58 VPSHSRWFSWDSIHQCEVRHLPEFFDSSS--KSPRVYKYYRNSIIKYFRYNPNRKITFTD 115
+PS S+WF+WD IH+ E E+FD +S ++P++YK YR+ II +R P+R++TFT+
Sbjct: 18 IPSSSKWFAWDEIHETEKTAFKEYFDGTSITRTPKIYKEYRDFIINKYREEPSRRLTFTE 77
Query: 116 VRKMLVGDVGSIRRVFEFLEAWGLINYHPSSSFS--KPFKWDDKD-TKVDSAEPPPPPVR 172
VRK LVGDV + +VF FLE WGLINY S+ + + K +K+ K+ E P +R
Sbjct: 78 VRKSLVGDVTFLNKVFLFLECWGLINYGAPSAGNDGEAEKEHEKERCKLKVEEGAPNGIR 137
Query: 173 ETA-------------KRVCSG----------------------------------CKAL 185
A ++ +G C
Sbjct: 138 VVATPNSLKPISLPRDTKIAAGGGDESGAGVKIAPLASYSDVYGDLIRRKEVNCGNCGDK 197
Query: 186 CTIACFVCDKYDLTLCARCYVRGNYRVGVSSSDFK---RVEISXXXXXXXXXXXXLNLVE 242
C + K + +C +C+ GNY S DFK EIS L L+E
Sbjct: 198 CGSGHYRSTKDNFIICTKCFKNGNYGEKRSMEDFKLNESSEISANHSAVWTEGETLLLLE 257
Query: 243 AISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGSA------------------- 283
++ +GDDW+ V+ V +T+ EC++ ++LPFGE L S
Sbjct: 258 SVLKHGDDWELVAQSVRTKTKLECISKLIELPFGELMLASVRRNDNSNSVTGIVNNRNQV 317
Query: 284 ------------VSDDGCELKQHADESETVASAESNKRMRLTPLADASNPIMAQAAFLSA 331
D E K +++ + +KR R++ L+D+S+ +M Q LS
Sbjct: 318 QVSSSDHQETSMTQDQSSEPKNEVEQNGDAVNENPSKRRRVSTLSDSSSSLMKQVGLLST 377
Query: 332 LAGPEVXXXXXXXXXXXXSDVYKSTRINYRSLPKNTLQQDAGVASNGGNNSDSLQ----- 386
+ P V D SLP++ + AS ++ L+
Sbjct: 378 VVDPHVTAAAASAAITALCD--------ENSLPRDIFDVEEDNASARALEAEGLEMVEGS 429
Query: 387 -------------------GARLNAS-----LQLEKDESDVEKAISEIIEVQMKNIQDKL 422
G L A+ L ++++ ++E ++ IIE Q++ +Q K+
Sbjct: 430 TQSEVKDDIPLTLRIRAAIGTALGATAARAKLLADQEDREIEHLVATIIEAQVEKLQQKV 489
Query: 423 VHFEDLDLLMEKERQQLEQTKNMFFLDQLTLLFQ--KPSAPKTGEYP 467
HF++L+LLMEKE ++E+ K+ +++ +L + K + YP
Sbjct: 490 KHFDELELLMEKEHAEMEELKDSILTERIDVLRKTFKSGVARWKHYP 536
>Medtr3g088480.1 | SWI/SNF complex protein | HC |
chr3:40113660-40120664 | 20130731
Length = 782
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 212/504 (42%), Gaps = 108/504 (21%)
Query: 55 VILVPSHSRWFSWDSIHQCEVRHLPEFFDSSSK--SPRVYKYYRNSIIKYFRYNPNRKIT 112
V+++P HS WFS ++H+ E + +P FF S+ +P Y RN I+ + P ++IT
Sbjct: 170 VLVLPMHSDWFSPGTVHRLERQAVPHFFSGKSQDLTPEKYMECRNYIVALYMEEPGKRIT 229
Query: 113 FTDVRKMLVGDVG--SIRRVFEFLEAWGLINYHPSSSFSKP------------------- 151
+D + + VG VG + R+ FL+ WG+INY + +P
Sbjct: 230 ASDCQGLQVG-VGHEDLTRIVRFLDHWGIINYCARTPSHEPPNAVSCLKEDTSGEIRVPS 288
Query: 152 ---------FKWDDKDTKVDSAEPPPP-------------PVRE-TAKRVCSGCKALCTI 188
K+D + K+ + E P +RE ++ C+ C
Sbjct: 289 EALKSIDSLIKFDKTNCKLKAEEIYSPLTMHSGDVPDLDSRIREHLSENHCNYCSCPLPA 348
Query: 189 ACFVCDK-YDLTLCARCYVRGNYRVGVSSSDFKRVEISXXXXXXXXXX----XXLNLVEA 243
+ K D+ LC C+ G + VG SS DF RV+ S L L+EA
Sbjct: 349 VYYQSQKEVDILLCTDCFHDGKFVVGHSSIDFLRVDSSRDYGELDVESWTDQETLLLLEA 408
Query: 244 ISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFL-----------GSAVSDDGCELK 292
+ Y ++W ++ V +++ +C+ HFL+LP + L + ++ D
Sbjct: 409 MEIYHENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSVSSNVMNRDDNGRS 468
Query: 293 QHADESETVASA----ESNKRMRLTPLADASNPIMAQAAFLSALAGPEVXXXXXXXXXXX 348
H ++ +S+ R+ P A++ NP+MA AFL++ GP V
Sbjct: 469 HHYSNGDSAGPVHHIRDSDSRL---PFANSGNPVMALVAFLASAVGPRVAASCAHAALSV 525
Query: 349 XSD-----VYKSTRINYRSLPKNTLQQDAG----VASNGGNNSDSLQG------------ 387
S+ +S+ + R+ P+NT +D G A + +N D +
Sbjct: 526 MSEDNTGSQTESSGHDNRTNPENTHSRDGGSRGETAISNNHNEDKAKAPCSREQSEGRTT 585
Query: 388 -----------------ARLNASLQLEKDESDVEKAISEIIEVQMKNIQDKLVHFEDLDL 430
A + A L + +E ++++ + II Q+K ++ KL F +++
Sbjct: 586 PLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIINHQLKRLELKLKQFAEIET 645
Query: 431 LMEKERQQLEQTKNMFFLDQLTLL 454
L+ KE +Q+E+ K F ++ ++
Sbjct: 646 LLMKECEQVERAKQRFAAERTRVI 669
>Medtr4g069830.1 | SWI/SNF complex subunit SWI3D | HC |
chr4:26258593-26267090 | 20130731
Length = 1041
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 137/310 (44%), Gaps = 56/310 (18%)
Query: 52 DANVILVPSHSRWFSWDSIHQCEVRHLPEFFD--SSSKSPRVYKYYRNSIIKYFRYNPNR 109
DAN +VP+H WFSW IH E R +P FF+ S +++P Y RN I+K F NPN
Sbjct: 135 DANAHVVPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNI 194
Query: 110 KITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYH--PSSSFSKPFKWDDKDTKVDS---- 163
+I D+ ++ +GD + + + EFL+ WGLIN+H PS+ + DD + + +S
Sbjct: 195 QIELKDLSELDIGDSDARQEIMEFLDYWGLINFHPFPSTDSAVASTGDDGEAEKNSLLEK 254
Query: 164 ------AEPPPPPVRETA-------------------------------KRVCSGCKALC 186
+ PP V++T + C+ C C
Sbjct: 255 LYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDC 314
Query: 187 TIACFVCDKY-DLTLCARCYVRGNYRVGVSSSDF---KRVEISXXXXXXXXXXXXLNLVE 242
+ + C K D LC C+ + G+S DF + E + L L+E
Sbjct: 315 SRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLE 374
Query: 243 AISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGSAVSDDGCELKQHADESETVA 302
A+ Y ++W ++ V +++ +C+ HF+++P + F+ C+ A ET
Sbjct: 375 ALELYKENWTEIAEHVGTKSKAQCILHFVQMPIEDAFV-------DCDDDVDAGSKETAD 427
Query: 303 SAESNKRMRL 312
A +N + +
Sbjct: 428 PAATNNNLPM 437
>Medtr4g069830.2 | SWI/SNF complex subunit SWI3D | HC |
chr4:26258609-26267090 | 20130731
Length = 1039
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 137/310 (44%), Gaps = 56/310 (18%)
Query: 52 DANVILVPSHSRWFSWDSIHQCEVRHLPEFFD--SSSKSPRVYKYYRNSIIKYFRYNPNR 109
DAN +VP+H WFSW IH E R +P FF+ S +++P Y RN I+K F NPN
Sbjct: 135 DANAHVVPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNI 194
Query: 110 KITFTDVRKMLVGDVGSIRRVFEFLEAWGLINYH--PSSSFSKPFKWDDKDTKVDS---- 163
+I D+ ++ +GD + + + EFL+ WGLIN+H PS+ + DD + + +S
Sbjct: 195 QIELKDLSELDIGDSDARQEIMEFLDYWGLINFHPFPSTDSAVASTGDDGEAEKNSLLEK 254
Query: 164 ------AEPPPPPVRETA-------------------------------KRVCSGCKALC 186
+ PP V++T + C+ C C
Sbjct: 255 LYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDC 314
Query: 187 TIACFVCDKY-DLTLCARCYVRGNYRVGVSSSDF---KRVEISXXXXXXXXXXXXLNLVE 242
+ + C K D LC C+ + G+S DF + E + L L+E
Sbjct: 315 SRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLE 374
Query: 243 AISHYGDDWKRVSHQVVGRTEKECVAHFLKLPFGEQFLGSAVSDDGCELKQHADESETVA 302
A+ Y ++W ++ V +++ +C+ HF+++P + F+ C+ A ET
Sbjct: 375 ALELYKENWTEIAEHVGTKSKAQCILHFVQMPIEDAFV-------DCDDDVDAGSKETAD 427
Query: 303 SAESNKRMRL 312
A +N + +
Sbjct: 428 PAATNNNLPM 437