Miyakogusa Predicted Gene

Lj1g3v3392210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3392210.1 tr|F2NFK9|F2NFK9_DESAR Biotin/lipoate A/B protein
ligase OS=Desulfobacca acetoxidans (strain ATCC
70,30.38,1.1,seg,NULL,CUFF.32053.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g116050.1 | multiple division site protein, putative | HC ...   178   9e-46

>Medtr3g116050.1 | multiple division site protein, putative | HC |
           chr3:54247564-54250413 | 20130731
          Length = 328

 Score =  178 bits (452), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 82/105 (78%), Positives = 88/105 (83%)

Query: 12  EMCGKVYRLAPVTLTQEQQTIHQKRRSRAYQWKRPTMFLKEGXXXXXXXXXXTIRWIPAN 71
           EMCGKVYRLAPVTLTQE+Q +HQ+RRSRAYQWKRPT+FLKEG          TIRWIPAN
Sbjct: 155 EMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQWKRPTVFLKEGESVPPDVDPDTIRWIPAN 214

Query: 72  HPFATTATDLDEDLAQNNVRQKDGVPFRIQAEHEALQRKLEALQN 116
           HPFATT+TD+ ED A  NV QK GVPFRIQAEHEALQRKLEALQN
Sbjct: 215 HPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEALQRKLEALQN 259