Miyakogusa Predicted Gene

Lj1g3v3391180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3391180.1 Non Characterized Hit- tr|I1K7A1|I1K7A1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.25,0,Ribophorin_I,Ribophorin I; coiled-coil,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; RIBOPHORIN I,Riboph,CUFF.32051.1
         (619 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g115980.1 | ribophorin I family protein | HC | chr3:542228...  1020   0.0  
Medtr1g094870.1 | ribophorin I family protein | HC | chr1:426685...   493   e-139

>Medtr3g115980.1 | ribophorin I family protein | HC |
           chr3:54222813-54229323 | 20130731
          Length = 617

 Score = 1020 bits (2637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/600 (81%), Positives = 536/600 (89%), Gaps = 3/600 (0%)

Query: 21  ILSSPALSLSDLILTKVDRRIDLTSQIARISTSLKVENAGSDLVSEILLSFPENQANHLA 80
           ILSS  LS  DLILTKVDRRIDL+SQI R +T+LKVENAGSD+VSEILL+FP+N   HLA
Sbjct: 20  ILSSHVLS--DLILTKVDRRIDLSSQIVRTTTTLKVENAGSDIVSEILLTFPDNHVKHLA 77

Query: 81  HLTAKLSEGKGKGKT-SGVGLPVEVVHPEGVPSSLTIYSVTLPKGIGKGDSLTLDVLAVF 139
           +L+A L+EGKGK K+ SGVGLP EVV P+ +PSSL  YSVTLPKG+GK +SLT+D+L VF
Sbjct: 78  YLSATLNEGKGKAKSFSGVGLPYEVVRPKDIPSSLATYSVTLPKGLGKAESLTMDILTVF 137

Query: 140 THTLEPFPEKITQADIQLLLFQESAHYLSPYAVKFQSLTVKLPDARIESYTKLDSAKLQG 199
           TH L+PFPEKITQADIQLLLFQESA YLSPY VK QSL VKLP+ARIESYTKL++ KLQG
Sbjct: 138 THILQPFPEKITQADIQLLLFQESAQYLSPYPVKVQSLNVKLPEARIESYTKLENTKLQG 197

Query: 200 SELKYGPYENLPPFSYLPIVVHFENNRPFAVAKELVREIEISHWGNVQVTEHYNLVHGGA 259
           SELKYGPYENLPPFSYLPIV+HFENN+PFAVAKELVREIEISHWGNVQ+TEHYNLVHGGA
Sbjct: 198 SELKYGPYENLPPFSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGA 257

Query: 260 QIKGEFSRLDYQSRPHVRGASSFRRLLAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTEL 319
           Q KGEFSRLDYQ+RP+VRGAS+FRRL AKLPPRAHSVYYRDEIGNISTSSLWGDSKKTEL
Sbjct: 258 QSKGEFSRLDYQARPYVRGASAFRRLTAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTEL 317

Query: 320 EIEPRYPLFGGWNSAFTIGYGLPLKDFLFGLDGKRFLNITFSTPINDLVIDTLFVKVVLP 379
           EIEPRYPLFGGW +AFTIGYGLPL+DFLFG+DGKRFLNI+F +PIN+LVIDTL VKVVLP
Sbjct: 318 EIEPRYPLFGGWKTAFTIGYGLPLQDFLFGVDGKRFLNISFGSPINELVIDTLVVKVVLP 377

Query: 380 EGSKDISVSVPYPVKQSQETKFSHLDIAGRPVVVLEKNNVVPEHNVHFQVYYKFNSLSML 439
           EGSKDIS SVP+PVK+  ETKFSHLDIAGRPVVVLEKNN VPEHN HFQVYYKFN LSML
Sbjct: 378 EGSKDISPSVPFPVKERHETKFSHLDIAGRPVVVLEKNNAVPEHNEHFQVYYKFNRLSML 437

Query: 440 REPLMLISGFFFLFVACIAYVHADFSISKSSASYLAKLQWEEVQATVRQIHNIISRCLTT 499
           REPLMLISGFFFLF+A I Y+HAD SISK+SASYLAK+QWEEVQAT+ Q+H+I+SRCLTT
Sbjct: 438 REPLMLISGFFFLFLASIVYMHADLSISKTSASYLAKIQWEEVQATIHQVHSIVSRCLTT 497

Query: 500 HDKLEASLRDLSRTGDVQACKATRXXXXXXXXXXXXXXXXXXAFLQSSPQATPVLSKVEE 559
           HDKLEASLRDLSRTGD+Q CKATR                   FLQSSPQA  +L KVEE
Sbjct: 498 HDKLEASLRDLSRTGDIQGCKATRKSVDSSLKELTKELKSPVTFLQSSPQAAQILPKVEE 557

Query: 560 IITKERDLQEKLMAKHSTVVDCYEKKLGGREIENRIASHQQKITALRQEIDDLMDVIDEI 619
           +I KERDLQEKLMAKHSTVVDCYEKKLGGREIENRIASHQQKITAL+QEIDDLMD+IDEI
Sbjct: 558 VIAKERDLQEKLMAKHSTVVDCYEKKLGGREIENRIASHQQKITALKQEIDDLMDLIDEI 617


>Medtr1g094870.1 | ribophorin I family protein | HC |
           chr1:42668514-42675153 | 20130731
          Length = 469

 Score =  493 bits (1270), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/467 (54%), Positives = 330/467 (70%), Gaps = 12/467 (2%)

Query: 7   MSMLNLFPFLLTFTILSSPALSLSDLILTKVDRRIDLTSQIARISTSLKVENAGSDLVSE 66
           +++L LF   L F+IL + +     L +   +RRIDL S I ++  +LKVEN+G+   SE
Sbjct: 11  IALLFLF---LHFSILVN-SFPSQHLQIINAERRIDLNSHIIKVYLTLKVENSGTTPASE 66

Query: 67  ILLSFPENQANHLAHLTAKLSEGKGKGKTSGVGLPVEVVH---PEGVPSSLTIYSVTLPK 123
           + L+F   +A HLA L A  + GK K KT    +P++V     P+G P+    + VTL  
Sbjct: 67  VHLAFSPAEAEHLAVLKAAATTGKRKKKTY---VPLDVKSAEIPDG-PNGSKFFPVTLLT 122

Query: 124 GIGKGDSLTLDVLAVFTHTLEPFPEKITQADIQLLLFQESAHYLSPYAVKFQSLTVKLPD 183
            + KG++ TL+VL + TH+LEPFP +I+Q++ QL+ F++SA  LSPY VK Q+  +K P 
Sbjct: 123 PLSKGETTTLEVLYILTHSLEPFPVEISQSESQLVYFRDSAILLSPYHVKQQTTFIKTPT 182

Query: 184 ARIESYTKLDSAKLQGSELKYGPYENLPPFSYLPIVVHFENNRPFAVAKELVREIEISHW 243
           AR+ES+T ++  K  G+ELKYGPY+   P+SY P++VHFENN PFAV +EL REIEISHW
Sbjct: 183 ARVESFTVVEPTKRAGTELKYGPYDEQTPYSYSPVLVHFENNNPFAVVEELEREIEISHW 242

Query: 244 GNVQVTEHYNLVHGGAQIKGEFSRLDYQSRPHVRGASSFRRLLAKLPPRAHSVYYRDEIG 303
           G++Q+TE Y LVH GA+ KG FSR++YQ+R    G +SF+ LLAKLPPR HSVYYRDEIG
Sbjct: 243 GSLQITERYKLVHAGARHKGVFSRVEYQTRSGASGVASFKHLLAKLPPRVHSVYYRDEIG 302

Query: 304 NISTSSLWGDSKKTELEIEPRYPLFGGWNSAFTIGYGLPLKDFLF-GLDGKRFLNITFST 362
           NIS+S L  D  K+ELE EPRYPLFGGW S F +GYGLPL+DFLF   DG+R+LN T+  
Sbjct: 303 NISSSHLRTDFLKSELEFEPRYPLFGGWKSTFLLGYGLPLQDFLFESPDGRRYLNFTYGC 362

Query: 363 PINDLVIDTLFVKVVLPEGSKDISVSVPYPVKQSQETKFSHLDIAGRPVVVLEKNNVVPE 422
           P+   V+D L +KVVLPEGSKD +  +P+ V Q  ETK+S+LDI GR VVVLEK NVVPE
Sbjct: 363 PLAQTVVDKLIIKVVLPEGSKDPAAVIPFQVDQHLETKYSYLDIVGRTVVVLEKRNVVPE 422

Query: 423 HNVHFQVYYKFNSLSMLREPLMLISGFFFLFVACIAYVHADFSISKS 469
           HN+ FQVYY FN + ML EPLML S FF LF A + Y+H D SI KS
Sbjct: 423 HNIPFQVYYNFNPIFMLAEPLMLASVFFLLFAASVTYLHMDLSIRKS 469