Miyakogusa Predicted Gene

Lj1g3v3390050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3390050.1 Non Characterized Hit- tr|I1JSS0|I1JSS0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,72.05,0,seg,NULL,gene.g34715.t1.1
         (317 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g116050.1 | multiple division site protein, putative | HC ...   356   2e-98

>Medtr3g116050.1 | multiple division site protein, putative | HC |
           chr3:54247564-54250413 | 20130731
          Length = 328

 Score =  356 bits (914), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 199/322 (61%), Positives = 224/322 (69%), Gaps = 16/322 (4%)

Query: 1   MTVIEPCPLI----SSSSRTSPHRIRIRNGISKWSSVVVTRTQQLKQDSINSITKFHHQL 56
           ++V   CP      SS+ R   HR  I NGIS         TQQ KQ  I SI+KFHHQL
Sbjct: 12  LSVRPSCPFFIDSNSSTRRRRRHRFLITNGIS---------TQQFKQQCITSISKFHHQL 62

Query: 57  VGSV--PIPPFLLNRNAGNNFAIWXXXXXXXXXXXX-XXXXMSRKKERPGSVADLVRRGQ 113
           + S+  P+P FL NRN G N  IW                  SRKKERPGSVADLVRRGQ
Sbjct: 63  LTSISIPMPQFLTNRNIGINLPIWVCVAVVILVASLRALSKFSRKKERPGSVADLVRRGQ 122

Query: 114 LRSDRRGISRPLKYEDPFNNPMVKVGKSNSTVEMCGKVYRLAPVTLTQEQQTIHQKRRSR 173
           LRSDRRGISR LKYEDPF+NP+VKV KS S+VEMCGKVYRLAPVTLTQE+Q +HQ+RRSR
Sbjct: 123 LRSDRRGISRNLKYEDPFDNPLVKVSKSKSSVEMCGKVYRLAPVTLTQEEQAVHQRRRSR 182

Query: 174 AYQWKRPTMFLKEGXXXXXXXXXXTIRWITANHPFATTATDLDEDLAQNNVRQKDGVPFR 233
           AYQWKRPT+FLKEG          TIRWI ANHPFATT+TD+ ED A  NV QK GVPFR
Sbjct: 183 AYQWKRPTVFLKEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFR 242

Query: 234 IQAEHEALQRKLEALQNDPKLNKLVIDPTNSKEFERPLNSNARLNDHAEKSSVNNQVXXX 293
           IQAEHEALQRKLEALQN+ +LNK+VI+P N+KEFERP NS+ RLNDHAEK+S+NNQV   
Sbjct: 243 IQAEHEALQRKLEALQNEEELNKVVINPINAKEFERPFNSHGRLNDHAEKTSLNNQVKDP 302

Query: 294 XXXXXXXXXNHLESASPSEEYQ 315
                    N+  SAS S E Q
Sbjct: 303 LSSKLDSSPNNFGSASSSGEDQ 324