Miyakogusa Predicted Gene
- Lj1g3v3385850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3385850.1 Non Characterized Hit- tr|J3M0S4|J3M0S4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,40.94,0.00000000000002,seg,NULL,TC62369.path1.1
(171 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g115950.2 | DHHC-type zinc finger protein | HC | chr3:5420... 243 7e-65
Medtr3g115950.1 | DHHC-type zinc finger protein | HC | chr3:5420... 242 1e-64
>Medtr3g115950.2 | DHHC-type zinc finger protein | HC |
chr3:54207417-54213078 | 20130731
Length = 569
Score = 243 bits (620), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 1 MSNFSSPQVSNFAPSPGLKPDLNRDHFNPMYQQPSGNQSPSSAKESERNVNPVHENGARV 60
MSN SSPQVSN +PSP +P LNRDHFNPMYQQPS NQSPSS + SE +VNPVHENGARV
Sbjct: 400 MSNLSSPQVSNISPSPMQRPGLNRDHFNPMYQQPSINQSPSSVRGSEGSVNPVHENGARV 459
Query: 61 PMRSNRLAIPENRRSSVFWDQAAGRFVXXXXXXXXXXXXXXTELLYTGRNIFFGSPVVNE 120
MR+N LA+ E+RRSSVFWDQAAGRFV TEL Y+GR+IFFGSP V+E
Sbjct: 460 AMRNNSLAVLEDRRSSVFWDQAAGRFVPNPSRAQGSSQIPGTELTYSGRSIFFGSPAVSE 519
Query: 121 QPTTGTRNSSSVVAGISDRDSMSRDFQQGRSHRGAQLPVFVPGYSQQNKFS 171
Q GTRNSSS VAG+SDRD+ RDFQQGRSHRGAQLPVFVP YSQQNKFS
Sbjct: 520 QSNAGTRNSSS-VAGVSDRDNTIRDFQQGRSHRGAQLPVFVPSYSQQNKFS 569
>Medtr3g115950.1 | DHHC-type zinc finger protein | HC |
chr3:54207417-54213097 | 20130731
Length = 643
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 1 MSNFSSPQVSNFAPSPGLKPDLNRDHFNPMYQQPSGNQSPSSAKESERNVNPVHENGARV 60
MSN SSPQVSN +PSP +P LNRDHFNPMYQQPS NQSPSS + SE +VNPVHENGARV
Sbjct: 474 MSNLSSPQVSNISPSPMQRPGLNRDHFNPMYQQPSINQSPSSVRGSEGSVNPVHENGARV 533
Query: 61 PMRSNRLAIPENRRSSVFWDQAAGRFVXXXXXXXXXXXXXXTELLYTGRNIFFGSPVVNE 120
MR+N LA+ E+RRSSVFWDQAAGRFV TEL Y+GR+IFFGSP V+E
Sbjct: 534 AMRNNSLAVLEDRRSSVFWDQAAGRFVPNPSRAQGSSQIPGTELTYSGRSIFFGSPAVSE 593
Query: 121 QPTTGTRNSSSVVAGISDRDSMSRDFQQGRSHRGAQLPVFVPGYSQQNKFS 171
Q GTRNSSS VAG+SDRD+ RDFQQGRSHRGAQLPVFVP YSQQNKFS
Sbjct: 594 QSNAGTRNSSS-VAGVSDRDNTIRDFQQGRSHRGAQLPVFVPSYSQQNKFS 643