Miyakogusa Predicted Gene

Lj1g3v3385850.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3385850.1 Non Characterized Hit- tr|J3M0S4|J3M0S4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,40.94,0.00000000000002,seg,NULL,TC62369.path1.1
         (171 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g115950.2 | DHHC-type zinc finger protein | HC | chr3:5420...   243   7e-65
Medtr3g115950.1 | DHHC-type zinc finger protein | HC | chr3:5420...   242   1e-64

>Medtr3g115950.2 | DHHC-type zinc finger protein | HC |
           chr3:54207417-54213078 | 20130731
          Length = 569

 Score =  243 bits (620), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 124/171 (72%), Positives = 136/171 (79%), Gaps = 1/171 (0%)

Query: 1   MSNFSSPQVSNFAPSPGLKPDLNRDHFNPMYQQPSGNQSPSSAKESERNVNPVHENGARV 60
           MSN SSPQVSN +PSP  +P LNRDHFNPMYQQPS NQSPSS + SE +VNPVHENGARV
Sbjct: 400 MSNLSSPQVSNISPSPMQRPGLNRDHFNPMYQQPSINQSPSSVRGSEGSVNPVHENGARV 459

Query: 61  PMRSNRLAIPENRRSSVFWDQAAGRFVXXXXXXXXXXXXXXTELLYTGRNIFFGSPVVNE 120
            MR+N LA+ E+RRSSVFWDQAAGRFV              TEL Y+GR+IFFGSP V+E
Sbjct: 460 AMRNNSLAVLEDRRSSVFWDQAAGRFVPNPSRAQGSSQIPGTELTYSGRSIFFGSPAVSE 519

Query: 121 QPTTGTRNSSSVVAGISDRDSMSRDFQQGRSHRGAQLPVFVPGYSQQNKFS 171
           Q   GTRNSSS VAG+SDRD+  RDFQQGRSHRGAQLPVFVP YSQQNKFS
Sbjct: 520 QSNAGTRNSSS-VAGVSDRDNTIRDFQQGRSHRGAQLPVFVPSYSQQNKFS 569


>Medtr3g115950.1 | DHHC-type zinc finger protein | HC |
           chr3:54207417-54213097 | 20130731
          Length = 643

 Score =  242 bits (618), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 124/171 (72%), Positives = 136/171 (79%), Gaps = 1/171 (0%)

Query: 1   MSNFSSPQVSNFAPSPGLKPDLNRDHFNPMYQQPSGNQSPSSAKESERNVNPVHENGARV 60
           MSN SSPQVSN +PSP  +P LNRDHFNPMYQQPS NQSPSS + SE +VNPVHENGARV
Sbjct: 474 MSNLSSPQVSNISPSPMQRPGLNRDHFNPMYQQPSINQSPSSVRGSEGSVNPVHENGARV 533

Query: 61  PMRSNRLAIPENRRSSVFWDQAAGRFVXXXXXXXXXXXXXXTELLYTGRNIFFGSPVVNE 120
            MR+N LA+ E+RRSSVFWDQAAGRFV              TEL Y+GR+IFFGSP V+E
Sbjct: 534 AMRNNSLAVLEDRRSSVFWDQAAGRFVPNPSRAQGSSQIPGTELTYSGRSIFFGSPAVSE 593

Query: 121 QPTTGTRNSSSVVAGISDRDSMSRDFQQGRSHRGAQLPVFVPGYSQQNKFS 171
           Q   GTRNSSS VAG+SDRD+  RDFQQGRSHRGAQLPVFVP YSQQNKFS
Sbjct: 594 QSNAGTRNSSS-VAGVSDRDNTIRDFQQGRSHRGAQLPVFVPSYSQQNKFS 643