Miyakogusa Predicted Gene

Lj1g3v3384570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3384570.1 Non Characterized Hit- tr|F6I0L4|F6I0L4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.85,5e-19,CBS-domain,NULL; CBS,Cystathionine beta-synthase,
core; no description,NULL,CUFF.30584.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g116850.1 | SNF1-related kinase regulatory subunit gamma 1...   130   2e-31

>Medtr3g116850.1 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr3:54642388-54640074 | 20130731
          Length = 419

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/78 (76%), Positives = 69/78 (88%)

Query: 1   MKNSLISRMDSPATNKENDTLKQVMEHMTQTNSSFSFVINDTKQVTGLLTLRDIILQFAP 60
           +KNS  SRMDSP TN+ N TLKQVMEHMTQTNSSFSF+IND +QVTG++T+RD+ILQFAP
Sbjct: 327 LKNSFTSRMDSPVTNRANQTLKQVMEHMTQTNSSFSFLINDNEQVTGVITVRDVILQFAP 386

Query: 61  PGVNSTIHGGGFFEFALE 78
           P VNS+I GGGFFE ALE
Sbjct: 387 PCVNSSIGGGGFFELALE 404