Miyakogusa Predicted Gene

Lj1g3v3381400.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3381400.1 tr|I1K753|I1K753_SOYBN Bifunctional dihydrofolate
reductase-thymidylate synthase OS=Glycine max GN=G,82.29,0,seg,NULL;
Dihydrofolate reductase-like,Dihydrofolate reductase-like domain;
Thymidylate synthase/dCM,CUFF.30578.1
         (328 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g117080.2 | dihydrofolate reductase-thymidylate synthase-l...   424   e-119
Medtr6g015630.3 | dihydrofolate reductase-thymidylate synthase-l...   424   e-119
Medtr3g117080.1 | dihydrofolate reductase-thymidylate synthase-l...   423   e-118
Medtr6g015630.1 | dihydrofolate reductase-thymidylate synthase-l...   402   e-112
Medtr6g015630.4 | dihydrofolate reductase-thymidylate synthase-l...   402   e-112
Medtr6g015630.2 | dihydrofolate reductase-thymidylate synthase-l...   402   e-112
Medtr4g070670.1 | dihydrofolate reductase-thymidylate synthase-l...   370   e-102

>Medtr3g117080.2 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr3:54760289-54757389 | 20130731
          Length = 491

 Score =  424 bits (1090), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/322 (67%), Positives = 241/322 (74%), Gaps = 7/322 (2%)

Query: 9   WKIPLQFPKNRPCSPCFQ-TVSSSFCR-FLSSMMTGDSFVVXXXXXXXXXXPLPNLQRTY 66
           ++I L F KN  CSP F    S S CR FLSS M GDS  +             NLQRTY
Sbjct: 4   FQIALHFQKNWLCSPYFHPNQSLSLCRRFLSSTMAGDSSAIFNGNGNGSI----NLQRTY 59

Query: 67  QVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWESIPLKYR 126
           QVVVAATK+MGIGKDGKLPWRL TDLKFFKEITT TS+PGKKNAIVMGRKTWESIPL++R
Sbjct: 60  QVVVAATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWESIPLQFR 119

Query: 127 PLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGGGQIFRE 186
           PL GRLNVVLTRSG+FDI  AENVVIC S+          PY  SIEK+FVIGGG+IFRE
Sbjct: 120 PLLGRLNVVLTRSGTFDIAAAENVVICRSMSSALELLAASPYHTSIEKIFVIGGGEIFRE 179

Query: 187 VLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATYVRVQSS 246
            LNAP CEAIH TEI ++IECDTFMPP+D+T +Q WYSSF KVEN+IRYSF TYVRV+SS
Sbjct: 180 ALNAPECEAIHLTEIQSNIECDTFMPPIDTTIFQPWYSSFTKVENNIRYSFTTYVRVRSS 239

Query: 247 AAESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISEXXXXXXX 306
           AAE   +NTD  FD+NS S KFEVQNF FLP+MI +RH EYMYL L+QEIIS+       
Sbjct: 240 AAE-YPKNTDSFFDSNSASKKFEVQNFSFLPKMIFERHAEYMYLNLVQEIISQGTTKGDR 298

Query: 307 XXXXXLSKFGCQMRFNLRRSFP 328
                LS FGCQMRFNLRR FP
Sbjct: 299 TGTGTLSAFGCQMRFNLRRGFP 320


>Medtr6g015630.3 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr6:5319938-5314483 | 20130731
          Length = 561

 Score =  424 bits (1089), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/322 (67%), Positives = 241/322 (74%), Gaps = 7/322 (2%)

Query: 9   WKIPLQFPKNRPCSPCFQ-TVSSSFCR-FLSSMMTGDSFVVXXXXXXXXXXPLPNLQRTY 66
           ++I L F KN  CSP F    S S CR FLSS+M GDS  +             NLQRTY
Sbjct: 4   FQIALHFQKNWLCSPYFHPNQSLSLCRRFLSSIMAGDSSAIFNGNGNGSI----NLQRTY 59

Query: 67  QVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWESIPLKYR 126
           QVVVAATK+MGIGKDGKLPWRL TDLKFFKEITT TS+PGKKNAIVMGRKTWESIPL +R
Sbjct: 60  QVVVAATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWESIPLHFR 119

Query: 127 PLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGGGQIFRE 186
           PL GRLNVVLTRSG+FDI  AENVVIC S+          PY  SIEK+FVIGGG+IFRE
Sbjct: 120 PLLGRLNVVLTRSGTFDIAAAENVVICRSMSSALELLAASPYHTSIEKIFVIGGGEIFRE 179

Query: 187 VLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATYVRVQSS 246
            LNAP CEAIH TEI ++IECDTFMPP+D+T +Q WYSSF KVEN+IRYSF TYVRV+SS
Sbjct: 180 ALNAPECEAIHLTEIQSNIECDTFMPPIDTTIFQPWYSSFTKVENNIRYSFTTYVRVRSS 239

Query: 247 AAESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISEXXXXXXX 306
           AAE   +NTD  FD+NS S KFEVQNF FLP+MI +RH EYMYL L+QEIIS+       
Sbjct: 240 AAE-YPKNTDSFFDSNSASKKFEVQNFSFLPKMIFERHAEYMYLNLVQEIISQGTTKGDR 298

Query: 307 XXXXXLSKFGCQMRFNLRRSFP 328
                LS FGCQMRFNLRR FP
Sbjct: 299 TGTGTLSAFGCQMRFNLRRGFP 320


>Medtr3g117080.1 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr3:54761987-54756466 | 20130731
          Length = 569

 Score =  423 bits (1087), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/320 (67%), Positives = 239/320 (74%), Gaps = 7/320 (2%)

Query: 11  IPLQFPKNRPCSPCFQ-TVSSSFCR-FLSSMMTGDSFVVXXXXXXXXXXPLPNLQRTYQV 68
           I L F KN  CSP F    S S CR FLSS M GDS  +             NLQRTYQV
Sbjct: 14  IALHFQKNWLCSPYFHPNQSLSLCRRFLSSTMAGDSSAIFNGNGNGSI----NLQRTYQV 69

Query: 69  VVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWESIPLKYRPL 128
           VVAATK+MGIGKDGKLPWRL TDLKFFKEITT TS+PGKKNAIVMGRKTWESIPL++RPL
Sbjct: 70  VVAATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWESIPLQFRPL 129

Query: 129 PGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGGGQIFREVL 188
            GRLNVVLTRSG+FDI  AENVVIC S+          PY  SIEK+FVIGGG+IFRE L
Sbjct: 130 LGRLNVVLTRSGTFDIAAAENVVICRSMSSALELLAASPYHTSIEKIFVIGGGEIFREAL 189

Query: 189 NAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATYVRVQSSAA 248
           NAP CEAIH TEI ++IECDTFMPP+D+T +Q WYSSF KVEN+IRYSF TYVRV+SSAA
Sbjct: 190 NAPECEAIHLTEIQSNIECDTFMPPIDTTIFQPWYSSFTKVENNIRYSFTTYVRVRSSAA 249

Query: 249 ESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISEXXXXXXXXX 308
           E   +NTD  FD+NS S KFEVQNF FLP+MI +RH EYMYL L+QEIIS+         
Sbjct: 250 E-YPKNTDSFFDSNSASKKFEVQNFSFLPKMIFERHAEYMYLNLVQEIISQGTTKGDRTG 308

Query: 309 XXXLSKFGCQMRFNLRRSFP 328
              LS FGCQMRFNLRR FP
Sbjct: 309 TGTLSAFGCQMRFNLRRGFP 328


>Medtr6g015630.1 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr6:5319702-5315138 | 20130731
          Length = 525

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/268 (73%), Positives = 216/268 (80%), Gaps = 1/268 (0%)

Query: 61  NLQRTYQVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWES 120
           NLQRTYQVVVAATK+MGIGKDGKLPWRL TDLKFFKEITT TS+PGKKNAIVMGRKTWES
Sbjct: 18  NLQRTYQVVVAATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWES 77

Query: 121 IPLKYRPLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGG 180
           IPL +RPL GRLNVVLTRSG+FDI  AENVVIC S+          PY  SIEK+FVIGG
Sbjct: 78  IPLHFRPLLGRLNVVLTRSGTFDIAAAENVVICRSMSSALELLAASPYHTSIEKIFVIGG 137

Query: 181 GQIFREVLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATY 240
           G+IFRE LNAP CEAIH TEI ++IECDTFMPP+D+T +Q WYSSF KVEN+IRYSF TY
Sbjct: 138 GEIFREALNAPECEAIHLTEIQSNIECDTFMPPIDTTIFQPWYSSFTKVENNIRYSFTTY 197

Query: 241 VRVQSSAAESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISEX 300
           VRV+SSAAE   +NTD  FD+NS S KFEVQNF FLP+MI +RH EYMYL L+QEIIS+ 
Sbjct: 198 VRVRSSAAE-YPKNTDSFFDSNSASKKFEVQNFSFLPKMIFERHAEYMYLNLVQEIISQG 256

Query: 301 XXXXXXXXXXXLSKFGCQMRFNLRRSFP 328
                      LS FGCQMRFNLRR FP
Sbjct: 257 TTKGDRTGTGTLSAFGCQMRFNLRRGFP 284


>Medtr6g015630.4 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr6:5319938-5314483 | 20130731
          Length = 525

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/268 (73%), Positives = 216/268 (80%), Gaps = 1/268 (0%)

Query: 61  NLQRTYQVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWES 120
           NLQRTYQVVVAATK+MGIGKDGKLPWRL TDLKFFKEITT TS+PGKKNAIVMGRKTWES
Sbjct: 18  NLQRTYQVVVAATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWES 77

Query: 121 IPLKYRPLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGG 180
           IPL +RPL GRLNVVLTRSG+FDI  AENVVIC S+          PY  SIEK+FVIGG
Sbjct: 78  IPLHFRPLLGRLNVVLTRSGTFDIAAAENVVICRSMSSALELLAASPYHTSIEKIFVIGG 137

Query: 181 GQIFREVLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATY 240
           G+IFRE LNAP CEAIH TEI ++IECDTFMPP+D+T +Q WYSSF KVEN+IRYSF TY
Sbjct: 138 GEIFREALNAPECEAIHLTEIQSNIECDTFMPPIDTTIFQPWYSSFTKVENNIRYSFTTY 197

Query: 241 VRVQSSAAESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISEX 300
           VRV+SSAAE   +NTD  FD+NS S KFEVQNF FLP+MI +RH EYMYL L+QEIIS+ 
Sbjct: 198 VRVRSSAAE-YPKNTDSFFDSNSASKKFEVQNFSFLPKMIFERHAEYMYLNLVQEIISQG 256

Query: 301 XXXXXXXXXXXLSKFGCQMRFNLRRSFP 328
                      LS FGCQMRFNLRR FP
Sbjct: 257 TTKGDRTGTGTLSAFGCQMRFNLRRGFP 284


>Medtr6g015630.2 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr6:5319938-5314483 | 20130731
          Length = 525

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/268 (73%), Positives = 216/268 (80%), Gaps = 1/268 (0%)

Query: 61  NLQRTYQVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWES 120
           NLQRTYQVVVAATK+MGIGKDGKLPWRL TDLKFFKEITT TS+PGKKNAIVMGRKTWES
Sbjct: 18  NLQRTYQVVVAATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWES 77

Query: 121 IPLKYRPLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGG 180
           IPL +RPL GRLNVVLTRSG+FDI  AENVVIC S+          PY  SIEK+FVIGG
Sbjct: 78  IPLHFRPLLGRLNVVLTRSGTFDIAAAENVVICRSMSSALELLAASPYHTSIEKIFVIGG 137

Query: 181 GQIFREVLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATY 240
           G+IFRE LNAP CEAIH TEI ++IECDTFMPP+D+T +Q WYSSF KVEN+IRYSF TY
Sbjct: 138 GEIFREALNAPECEAIHLTEIQSNIECDTFMPPIDTTIFQPWYSSFTKVENNIRYSFTTY 197

Query: 241 VRVQSSAAESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISEX 300
           VRV+SSAAE   +NTD  FD+NS S KFEVQNF FLP+MI +RH EYMYL L+QEIIS+ 
Sbjct: 198 VRVRSSAAE-YPKNTDSFFDSNSASKKFEVQNFSFLPKMIFERHAEYMYLNLVQEIISQG 256

Query: 301 XXXXXXXXXXXLSKFGCQMRFNLRRSFP 328
                      LS FGCQMRFNLRR FP
Sbjct: 257 TTKGDRTGTGTLSAFGCQMRFNLRRGFP 284


>Medtr4g070670.1 | dihydrofolate reductase-thymidylate synthase-like
           protein | HC | chr4:26618056-26613509 | 20130731
          Length = 528

 Score =  370 bits (949), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/269 (65%), Positives = 209/269 (77%)

Query: 60  PNLQRTYQVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWE 119
           PN QRTYQVVV AT+DMGI KDGKLPW L  D KFF++ITT TSDPGKKNA+VMGRK+WE
Sbjct: 19  PNPQRTYQVVVIATRDMGIAKDGKLPWTLPIDQKFFEDITTVTSDPGKKNAVVMGRKSWE 78

Query: 120 SIPLKYRPLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIG 179
           +IP + RPL GRLN++LTRSGSF+I TA+NV+ICGS+          PYC SIEKVF+ G
Sbjct: 79  AIPPENRPLRGRLNIILTRSGSFEIATADNVLICGSVSSAMELLASSPYCQSIEKVFLTG 138

Query: 180 GGQIFREVLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFAT 239
           G +IFRE L+APGCEAIH TEI ASIECDTFMP +D + +  WY+SFP VEN IRYSF T
Sbjct: 139 GAEIFREALHAPGCEAIHITEIEASIECDTFMPRIDFSVFHPWYTSFPLVENGIRYSFNT 198

Query: 240 YVRVQSSAAESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISE 299
           YVRV+SS  ES   NTDP+  +NS+ LKFE+++F FLP++I +RHEEY YL+L++EIISE
Sbjct: 199 YVRVRSSTEESQGLNTDPVLYDNSNPLKFEIKDFTFLPKIIFERHEEYKYLKLVEEIISE 258

Query: 300 XXXXXXXXXXXXLSKFGCQMRFNLRRSFP 328
                       LSKFG +MRFNLRRSFP
Sbjct: 259 GTVKDDRTGTGTLSKFGSKMRFNLRRSFP 287