Miyakogusa Predicted Gene

Lj1g3v3381300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3381300.1 tr|E6NUE8|E6NUE8_9ROSI JMS10C05.1 protein
OS=Jatropha curcas GN=JMS10C05.1 PE=4
SV=1,26.83,2e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; PGR3 (P,CUFF.30566.1
         (576 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g117150.1 | organelle transcript processing protein, putat...   900   0.0  
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:...   460   e-129
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:...   444   e-125
Medtr4g113830.1 | organelle transcript processing protein, putat...   422   e-118
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:...   411   e-115
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |...   407   e-113
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ...   407   e-113
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ...   406   e-113
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ...   406   e-113
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ...   404   e-112
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ...   404   e-112
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ...   401   e-112
Medtr3g052720.1 | organelle transcript processing protein, putat...   400   e-111
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ...   396   e-110
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ...   393   e-109
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ...   393   e-109
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ...   392   e-109
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ...   391   e-109
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758...   388   e-108
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ...   387   e-107
Medtr5g006420.1 | organelle transcript processing protein, putat...   385   e-107
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ...   381   e-106
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ...   379   e-105
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ...   379   e-105
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ...   379   e-105
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ...   377   e-104
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |...   377   e-104
Medtr1g059720.1 | organelle transcript processing protein, putat...   376   e-104
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ...   376   e-104
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ...   374   e-103
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ...   372   e-103
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ...   369   e-102
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ...   369   e-102
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ...   368   e-102
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:...   367   e-101
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ...   367   e-101
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465...   366   e-101
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ...   365   e-101
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ...   363   e-100
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911...   362   e-100
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ...   362   e-100
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903...   362   e-100
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ...   362   e-100
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ...   361   1e-99
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ...   359   4e-99
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ...   358   6e-99
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:...   358   8e-99
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:...   357   2e-98
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:...   357   2e-98
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ...   355   6e-98
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ...   354   2e-97
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ...   353   2e-97
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ...   352   5e-97
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ...   352   5e-97
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ...   351   1e-96
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:...   350   2e-96
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:...   350   2e-96
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ...   350   3e-96
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ...   348   9e-96
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ...   348   9e-96
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ...   348   1e-95
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068...   347   2e-95
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ...   345   5e-95
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ...   345   6e-95
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ...   343   4e-94
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:...   342   6e-94
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ...   341   1e-93
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ...   341   1e-93
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ...   341   1e-93
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ...   340   2e-93
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ...   338   7e-93
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ...   336   5e-92
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ...   335   6e-92
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ...   334   1e-91
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ...   333   3e-91
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ...   333   3e-91
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ...   332   6e-91
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ...   330   2e-90
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ...   330   3e-90
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ...   329   4e-90
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ...   329   5e-90
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ...   329   6e-90
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ...   322   5e-88
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ...   322   6e-88
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ...   322   9e-88
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:...   321   1e-87
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:...   321   1e-87
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ...   321   2e-87
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ...   320   3e-87
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:...   317   2e-86
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ...   315   6e-86
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ...   315   6e-86
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:...   313   2e-85
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ...   312   5e-85
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:...   311   9e-85
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ...   310   2e-84
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:...   307   2e-83
Medtr6g460480.1 | organelle transcript processing protein, putat...   307   2e-83
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ...   303   2e-82
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ...   303   2e-82
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:...   302   5e-82
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ...   302   6e-82
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:...   301   1e-81
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ...   298   1e-80
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ...   296   3e-80
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ...   295   9e-80
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ...   294   2e-79
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:...   293   2e-79
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:...   293   2e-79
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf...   289   4e-78
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12...   285   7e-77
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:...   285   1e-76
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:...   285   1e-76
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ...   281   1e-75
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:...   281   2e-75
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:...   281   2e-75
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:...   279   7e-75
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:...   273   3e-73
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:...   271   1e-72
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ...   270   3e-72
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ...   270   4e-72
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:...   268   9e-72
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:...   267   2e-71
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:...   266   3e-71
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697...   265   8e-71
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:...   265   1e-70
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ...   265   1e-70
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:...   264   2e-70
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:...   262   6e-70
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:...   262   8e-70
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:...   261   1e-69
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:...   261   2e-69
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ...   260   3e-69
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ...   257   2e-68
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ...   255   9e-68
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602...   254   2e-67
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ...   253   3e-67
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:...   253   3e-67
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840...   249   4e-66
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:...   249   5e-66
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:...   249   6e-66
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:...   249   7e-66
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:...   248   1e-65
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:...   248   1e-65
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:...   248   1e-65
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:...   247   2e-65
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:...   246   3e-65
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:...   245   7e-65
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:...   245   7e-65
Medtr2g082550.1 | PPR containing plant-like protein, putative | ...   245   1e-64
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1...   244   2e-64
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:...   244   2e-64
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:...   241   1e-63
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:...   241   1e-63
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:...   239   5e-63
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:...   239   6e-63
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati...   239   7e-63
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:...   239   7e-63
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ...   237   2e-62
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:...   236   6e-62
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:...   234   2e-61
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:...   233   3e-61
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:...   233   3e-61
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:...   233   4e-61
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:...   233   5e-61
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:...   232   6e-61
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ...   232   6e-61
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:...   232   7e-61
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:...   231   1e-60
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:...   231   1e-60
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ...   230   3e-60
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ...   229   7e-60
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:...   228   2e-59
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:...   227   2e-59
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:...   226   5e-59
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:...   224   1e-58
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35...   224   2e-58
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ...   223   3e-58
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:...   223   4e-58
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:...   222   9e-58
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:...   221   1e-57
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:...   220   3e-57
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:...   220   3e-57
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:...   220   3e-57
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:...   219   7e-57
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ...   219   7e-57
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:...   219   8e-57
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:...   218   1e-56
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:...   218   1e-56
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:...   218   1e-56
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:...   217   3e-56
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:...   217   3e-56
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:...   216   4e-56
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ...   216   4e-56
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:...   216   4e-56
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:...   216   4e-56
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:...   216   5e-56
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:...   216   7e-56
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:...   214   1e-55
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:...   214   3e-55
Medtr8g066670.1 | chlororespiratory reduction protein, putative ...   213   3e-55
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:...   212   9e-55
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:...   212   9e-55
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:...   212   9e-55
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:...   212   1e-54
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:...   212   1e-54
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:...   211   1e-54
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:...   211   1e-54
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:...   211   2e-54
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:...   211   2e-54
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:...   210   3e-54
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:...   210   3e-54
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:...   209   5e-54
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:...   208   9e-54
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:...   207   2e-53
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ...   207   2e-53
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:...   206   5e-53
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:...   205   8e-53
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:...   205   8e-53
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:...   205   1e-52
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:...   205   1e-52
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ...   204   3e-52
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:...   203   3e-52
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:...   203   3e-52
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:...   203   4e-52
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:...   202   1e-51
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:...   200   3e-51
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:...   199   7e-51
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:...   199   8e-51
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ...   199   8e-51
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:...   198   1e-50
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ...   198   2e-50
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5...   197   2e-50
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:...   197   2e-50
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:...   197   2e-50
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:...   197   2e-50
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ...   197   3e-50
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:...   197   3e-50
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:...   195   9e-50
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:...   195   9e-50
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:...   194   2e-49
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ...   194   3e-49
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:...   192   5e-49
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ...   192   6e-49
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ...   192   6e-49
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ...   192   6e-49
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ...   192   6e-49
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ...   191   2e-48
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ...   191   2e-48
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ...   190   4e-48
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:...   189   6e-48
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:...   187   2e-47
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:...   187   3e-47
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ...   186   6e-47
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:...   185   9e-47
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:...   184   1e-46
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:...   183   5e-46
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:...   182   5e-46
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:...   182   6e-46
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:...   182   7e-46
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:...   182   9e-46
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:...   182   1e-45
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ...   181   1e-45
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:...   181   1e-45
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:...   181   2e-45
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ...   179   7e-45
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:...   179   7e-45
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:...   177   3e-44
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:...   177   3e-44
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ...   175   1e-43
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:...   173   4e-43
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:...   169   5e-42
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:...   167   2e-41
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:...   164   1e-40
Medtr5g031630.1 | PPR containing plant-like protein, putative | ...   163   5e-40
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:...   162   1e-39
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:...   160   2e-39
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:...   159   5e-39
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:...   154   3e-37
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:...   150   3e-36
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:...   143   4e-34
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:...   141   2e-33
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ...   135   8e-32
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ...   135   8e-32
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ...   134   2e-31
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4...   134   3e-31
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:...   118   1e-26
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:...   115   1e-25
Medtr6g024410.1 | DYW nucleic acid deaminase family protein | HC...   108   1e-23
Medtr5g025700.1 | DYW nucleic acid deaminase family protein | LC...   108   2e-23
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:...   102   2e-21
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:...    97   4e-20
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493...    94   3e-19
Medtr2g064660.1 | DYW nucleic acid deaminase family protein | HC...    92   2e-18
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:...    86   1e-16
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ...    85   2e-16
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:...    84   3e-16
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:...    83   1e-15
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311...    82   1e-15
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407...    78   3e-14
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ...    77   3e-14
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:...    77   4e-14
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249...    77   5e-14
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ...    76   1e-13
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ...    75   1e-13
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ...    75   2e-13
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |...    74   4e-13
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c...    73   6e-13
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ...    73   7e-13
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:...    73   7e-13
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3...    73   8e-13
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:...    72   2e-12
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:...    72   2e-12
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:...    72   2e-12
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:...    72   2e-12
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:...    71   3e-12
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ...    71   3e-12
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ...    70   4e-12
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ...    70   6e-12
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:...    70   6e-12
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:...    70   6e-12
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:...    70   7e-12
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:...    70   7e-12
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ...    69   1e-11
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:...    69   1e-11
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ...    69   1e-11
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:...    69   2e-11
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ...    68   2e-11
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963...    68   2e-11
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:...    68   3e-11
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:...    68   3e-11
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:...    68   3e-11
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:...    68   3e-11
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:...    68   3e-11
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:...    67   3e-11
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ...    67   4e-11
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ...    67   4e-11
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ...    67   4e-11
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:...    67   4e-11
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:...    67   4e-11
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ...    67   4e-11
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ...    67   5e-11
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:...    67   6e-11
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:...    67   6e-11
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ...    66   8e-11
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:...    66   8e-11
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:...    66   8e-11
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:...    65   1e-10
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ...    65   1e-10
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |...    65   2e-10
Medtr7g058380.1 | PPR repeat protein | HC | chr7:21009807-210090...    65   2e-10
Medtr7g024140.1 | PPR containing plant-like protein, putative | ...    65   2e-10
Medtr8g106955.1 | DYW nucleic acid deaminase family protein | HC...    65   2e-10
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ...    65   2e-10
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |...    65   2e-10
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |...    65   2e-10
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |...    65   2e-10
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ...    65   2e-10
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:...    65   2e-10
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:...    65   3e-10
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:...    64   4e-10
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |...    64   5e-10
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:...    64   5e-10
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ...    64   5e-10
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |...    64   6e-10
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:...    64   6e-10
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:...    63   6e-10
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |...    63   6e-10
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:...    63   9e-10
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ...    62   1e-09
Medtr3g051150.1 | editing factor, putative | LC | chr3:20182043-...    62   1e-09
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ...    62   2e-09
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:...    62   2e-09
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ...    62   2e-09
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:...    62   2e-09
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ...    62   2e-09
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:...    62   2e-09
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:...    62   2e-09
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:...    62   2e-09
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:...    61   2e-09
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:...    61   2e-09
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |...    61   3e-09
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046...    61   3e-09
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |...    61   3e-09
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:...    61   4e-09
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ...    60   4e-09
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ...    60   4e-09
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:...    60   4e-09
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ...    60   5e-09
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ...    60   6e-09
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |...    60   6e-09
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:...    60   6e-09
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:...    60   6e-09
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:...    60   7e-09
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ...    60   8e-09
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ...    60   8e-09
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ...    59   9e-09
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:...    59   1e-08
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ...    59   1e-08
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:...    59   1e-08
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:...    59   1e-08
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:...    59   1e-08
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:...    59   2e-08
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ...    59   2e-08
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:...    59   2e-08
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ...    58   2e-08
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:...    58   2e-08
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ...    58   2e-08
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:...    58   2e-08
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:...    58   3e-08
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338...    58   3e-08
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ...    58   3e-08
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:...    57   4e-08
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ...    57   5e-08
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |...    57   5e-08
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731...    57   5e-08
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831...    57   5e-08
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ...    57   5e-08
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:...    57   5e-08
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ...    57   6e-08
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:...    57   6e-08
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ...    57   7e-08
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:...    57   7e-08
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ...    56   7e-08
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ...    56   9e-08
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ...    56   9e-08
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:...    56   1e-07
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:...    56   1e-07
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |...    55   1e-07
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:...    55   1e-07
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ...    55   2e-07
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:...    55   2e-07
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |...    55   2e-07
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:...    55   2e-07
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:...    55   2e-07
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:...    55   2e-07
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ...    55   2e-07
Medtr1g095460.1 | PPR repeat protein | LC | chr1:42934065-429337...    55   2e-07
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:...    55   2e-07
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:...    55   2e-07
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:...    55   2e-07
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ...    55   2e-07
Medtr7g025610.1 | PPR containing plant-like protein, putative | ...    55   3e-07
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:...    55   3e-07
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |...    54   3e-07
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |...    54   3e-07
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ...    54   4e-07
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:...    54   4e-07
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:...    54   5e-07
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:...    54   5e-07
Medtr7g060720.1 | PPR containing plant-like protein, putative | ...    54   5e-07
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ...    54   5e-07
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:...    54   5e-07
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:...    54   5e-07
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:...    54   5e-07
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ...    54   6e-07
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:...    54   6e-07
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ...    54   6e-07
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ...    53   6e-07
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:...    53   7e-07
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |...    53   7e-07
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati...    53   8e-07
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:...    53   9e-07
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ...    53   9e-07
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ...    53   9e-07
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:...    53   1e-06
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ...    52   1e-06
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ...    52   1e-06
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:...    52   2e-06
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:...    52   2e-06
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:...    52   2e-06
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ...    52   2e-06
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ...    52   2e-06
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ...    51   3e-06
Medtr6g060490.1 | PPR superfamily protein, putative | LC | chr6:...    51   4e-06
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ...    51   4e-06
Medtr3g462750.1 | pentatricopeptide (PPR) repeat protein | HC | ...    51   4e-06
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ...    51   4e-06
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:...    50   4e-06
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:...    50   4e-06
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:...    50   5e-06
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:...    50   7e-06

>Medtr3g117150.1 | organelle transcript processing protein, putative
           | HC | chr3:54810037-54807667 | 20130731
          Length = 571

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/579 (75%), Positives = 489/579 (84%), Gaps = 11/579 (1%)

Query: 1   MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
           ME+T MS+ALQLHAQ +K   S N   RNFSKLFTFAA SPSGDLNYARLLL +NP+LNS
Sbjct: 1   MEITNMSQALQLHAQFIK---SQNQ--RNFSKLFTFAAQSPSGDLNYARLLLNTNPSLNS 55

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
           YYYNT++RAYS +S+PTHHF ALSLFIFML+ P   VP PD FT+ F LK C RLKL +Q
Sbjct: 56  YYYNTIIRAYSHTSNPTHHFQALSLFIFMLQ-PHTNVPKPDTFTYSFALKSCGRLKLTQQ 114

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
            KQLHGFI KMGFG D YI NALIHMYS  G+L +AR++FDRM  RDVVSWTS+I G V+
Sbjct: 115 AKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVN 174

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
           H   VEAI+LF RMLE GV+VN+ATV+SVLR CADSGALS+GRKVHGIVKEK  I+ K N
Sbjct: 175 HHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKG-IDFKAN 233

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           V TALI MY+K GC+ESA              WTAMI GLA HG+CKEAI+LFLEMETCN
Sbjct: 234 VCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCN 293

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
           VKPDERT+  VLSA RNA LVRE YM F+D++KRY ++P I+HFGC+VDLLA+ GCL+EA
Sbjct: 294 VKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEA 353

Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE---MGVDDSGSYILASNVY 417
           EDF+NAMPMKPDAV+WRTLIWACKVH DTERAERLMK HLE   M   DSGSYILASNVY
Sbjct: 354 EDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMK-HLELQGMSAHDSGSYILASNVY 412

Query: 418 ASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMV 477
           AS GKW +KAEVRELMNKKGL+KPPGSSRIEVDG +HEFVMGDY+HP+ + IF+KLD+MV
Sbjct: 413 ASTGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKLDQMV 472

Query: 478 DKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCE 537
           DKL+KEGYNPK+SEV+LE+DDEEKA QLLHHSEKLALAYGLIRT  GSKIRIVKNLRSCE
Sbjct: 473 DKLRKEGYNPKVSEVMLEMDDEEKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCE 532

Query: 538 DCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           DCHEFMKLISK+YQRDIIVRDRIRFHHFKNGDCSCKDYW
Sbjct: 533 DCHEFMKLISKVYQRDIIVRDRIRFHHFKNGDCSCKDYW 571


>Medtr1g012380.1 | PPR containing plant-like protein | HC |
           chr1:2444546-2447496 | 20130731
          Length = 600

 Score =  460 bits (1184), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/585 (42%), Positives = 355/585 (60%), Gaps = 27/585 (4%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLN---YARLLL--------T 53
           T+S+  Q+HA ILK G  NN  P   +K FT    S S +LN   YA   L        T
Sbjct: 30  TLSKLTQIHAFILKTGLQNN--PLILTK-FT----STSSNLNSIHYATSFLFPPSHTTST 82

Query: 54  SNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCA 113
             P+ +++ +NT++RAYS + D   +  +   +  MLR   +GV  P+ FTFPFVLK CA
Sbjct: 83  PTPSYDAFLFNTLIRAYSQTRDSKSN--SFLFYRTMLR---YGV-TPNKFTFPFVLKGCA 136

Query: 114 RLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV--ARELFDRMPDRDVVSW 171
            +   R GK +HG + K GF  D +++N LIHMY   G+ G   A ++FD  P  D V+W
Sbjct: 137 GIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTW 196

Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
           +++I G V       A++LF  M   GV  ++ T+VSVL ACAD GAL +G+ V   V E
Sbjct: 197 SAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYV-E 255

Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAID 291
           KK I     +  ALIDM+AK G ++ A              WT++I+GLA HG   +A+ 
Sbjct: 256 KKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVS 315

Query: 292 LFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
           LF EM    + PD+     VLSAC ++ LV +    F  M++ + I P ++H+GC+VDLL
Sbjct: 316 LFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLL 375

Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYI 411
            R G +KEA +F+  MP +P+ ++WRT+I AC    + +  E + K+ ++       +Y+
Sbjct: 376 CRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYV 435

Query: 412 LASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFV 471
           L SN+YA + +W  K +VRE+M+ +G+ K PGS+ IEV+  ++EFV GD +H +   I+ 
Sbjct: 436 LLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYE 495

Query: 472 KLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVK 531
            +DEM  ++KK GY P  S+VLL+ID+E+K   L  HSEKLA+A+ L+ T  G+ IRIVK
Sbjct: 496 MVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVK 555

Query: 532 NLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           NLR CEDCH   K ISK+Y R+I+VRDR RFHHFKNG CSC+D+W
Sbjct: 556 NLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600


>Medtr2g018870.1 | PPR containing plant-like protein | HC |
           chr2:6013889-6015841 | 20130731
          Length = 613

 Score =  444 bits (1143), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/566 (40%), Positives = 341/566 (60%), Gaps = 10/566 (1%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+HA  ++     N+   +  K   F  +S S  ++YA  + T     N + +NTM+R Y
Sbjct: 58  QIHAFSIRHNVPLNNP--DIGKYLIFTIVSLSAPMSYAHNVFTLLYNPNVFTWNTMIRGY 115

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           + S + T    AL L+    R+       PD  T+PF+LK  ++    R G+ +H    +
Sbjct: 116 AESDNSTP---ALGLY----RKMLGSCVEPDTHTYPFLLKAISKSLNVRDGEMIHSVTVR 168

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
            GF S  ++ N+L+H+Y+  GD   A ++F+ M +RD+V+W S+I+G   + +P EA+ L
Sbjct: 169 NGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFALNGKPNEALSL 228

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F  M   GVE +  TVVS+  ACA+ GAL +GR+VH +   K  +    +V+ +L+D YA
Sbjct: 229 FREMSLKGVEPDGFTVVSLFSACAELGALELGRRVH-VYLLKVGLTGNLHVNNSLLDFYA 287

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           K G I  A              WT+++ GLA +G  +EA+ LF EME   + P E T   
Sbjct: 288 KCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIVPREITFVG 347

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           VL AC +  ++ E +  F  MK+ YGI P I+H+GC+VDLL+RAG +K A +++ +MPM+
Sbjct: 348 VLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYEYIQSMPMQ 407

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
           P+AV+WRTL+ AC VH D    E      L++    SG Y+L SN+YAS  +WS+   VR
Sbjct: 408 PNAVIWRTLLGACTVHGDLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWSDVQTVR 467

Query: 431 ELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLS 490
             M + G+ K PG S +E+   + EF MGD +HP + +++  L+++ + LK EGY P  +
Sbjct: 468 RSMIEDGVWKTPGYSLVELGNRVFEFTMGDRSHPRSQDVYALLEKITELLKLEGYVPHTA 527

Query: 491 EVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIY 550
            VL +I++EEK   L +HSEK+A+A+ L+ T+ G+ IR++KNLR C DCH  +KLISK+Y
Sbjct: 528 NVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVIKNLRVCADCHMAIKLISKVY 587

Query: 551 QRDIIVRDRIRFHHFKNGDCSCKDYW 576
            R+II+RDR RFHHF  G CSCKDYW
Sbjct: 588 AREIIIRDRSRFHHFSGGSCSCKDYW 613


>Medtr4g113830.1 | organelle transcript processing protein, putative
           | HC | chr4:46849211-46846995 | 20130731
          Length = 738

 Score =  422 bits (1086), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/597 (39%), Positives = 332/597 (55%), Gaps = 35/597 (5%)

Query: 8   EALQLHAQILKLGTSNND-------------APRNFSKLF----------TFAAL----S 40
           E  QLHA  LKL    N                 +F++L           +F AL     
Sbjct: 149 EGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYV 208

Query: 41  PSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP 100
             G L+ AR L    P  +   +N M+  Y  S      F    +  + ++        P
Sbjct: 209 SQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSG----RFEEAIVCFYEMQEAN---VLP 261

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           +  T   VL  C   +    GK +  ++   GFGS+  + NALI MY   G+  +ARELF
Sbjct: 262 NKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELF 321

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           D + ++DV+SW ++I G        EA+ LF  ML + V+ ND T + +L ACA  GAL 
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALD 381

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
           +G+ VH  + +  R     ++ T+LIDMYAK GCIE+A              W AM+SG 
Sbjct: 382 LGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGF 441

Query: 281 ASHGLCKEAIDLFLEMETCNV-KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
           A HG  + A+ LF EM    + +PD+ T   VLSAC  A LV   +  F  M + YGI P
Sbjct: 442 AMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISP 501

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            +QH+GC++DLLARA   +EAE  M  M M+PD  +W +L+ ACK H   E  E + ++ 
Sbjct: 502 KLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERL 561

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
            ++  +++G+++L SN+YA  G+W + A +R  +N KG+ K PG + IE+DG +HEF++G
Sbjct: 562 FQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVG 621

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
           D  HPE +NI+  L+E+   L++ G+ P  SEVL ++D+E K   L  HSEKLA+++GLI
Sbjct: 622 DKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLI 681

Query: 520 RTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           +T  G+ IRIVKNLR C +CH   KLISKI+ R+II RDR RFHHFK+G CSC D W
Sbjct: 682 KTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  169 bits (429), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 198/428 (46%), Gaps = 45/428 (10%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL---NSYYYNTML 67
           Q+H+ I+K G +N    +  SKL  F A+SPSGDL+YA  L   N      N + +N+++
Sbjct: 46  QIHSLIIKTGLNNTVFVQ--SKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLI 103

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
           R YSLSS P    H  S  ++      +GV  P++ TFPF+ K C + K   +GKQLH  
Sbjct: 104 RGYSLSSSPLSSLHLFSRMLY------YGV-QPNSHTFPFLFKSCTKAKATHEGKQLHAH 156

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGV-------------------------------A 156
             K+    + ++  ++IHMY+  G++                                 A
Sbjct: 157 ALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDA 216

Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
           R LFD +P +DVVSW ++I G V   R  EAI  F  M EA V  N +T+V VL AC  +
Sbjct: 217 RRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHT 276

Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
            +  +G+ +   V++         ++ ALIDMY K G  + A              W  M
Sbjct: 277 RSGELGKWIGSWVRDNG-FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTM 335

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           I G +   L +EA+ LF  M   NVKP++ T   +L AC     +     V + + K   
Sbjct: 336 IGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLR 395

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
                  +  ++D+ A+ GC++ AE    +M  + +   W  ++    +H   ERA  L 
Sbjct: 396 NSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMHGHAERALALF 454

Query: 397 KQHLEMGV 404
            + +  G+
Sbjct: 455 SEMVNKGL 462



 Score = 94.0 bits (232), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 123/295 (41%), Gaps = 39/295 (13%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSV--FGDLGVARELFDRMPD---RDVVSWTSLID 176
           KQ+H  I K G  +  ++ + LIH  +V   GDL  A  LF+        +V  W SLI 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 177 GLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG--------- 227
           G      P+ ++ LF RML  GV+ N  T   + ++C  + A   G+++H          
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 228 ----------------------IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX 265
                                 +V +K  +    +  TALI  Y   GC++ A       
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSF-TALITGYVSQGCLDDARRLFDEI 223

Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
                  W AMISG    G  +EAI  F EM+  NV P++ TM  VLSAC +        
Sbjct: 224 PVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGK 283

Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
            + S ++   G    +Q    ++D+  + G    A +  + +  K D + W T+I
Sbjct: 284 WIGSWVRDN-GFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK-DVISWNTMI 336


>Medtr5g044260.1 | PPR containing plant-like protein | HC |
           chr5:19452918-19451090 | 20130731
          Length = 565

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/538 (42%), Positives = 331/538 (61%), Gaps = 14/538 (2%)

Query: 47  YARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFP 106
           +A++L T +   NS+ +N ++++YS S+   H   A+ L+  ++    + +  PD  T+P
Sbjct: 34  HAQILRTIHTP-NSFTWNILIQSYSKST--LHKQKAILLYKAIITEQENEL-FPDKHTYP 89

Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD- 165
           FVLK CA L    +GKQ+H  + K+GF  D YI N+LIH Y+  G L  AR++FDRM + 
Sbjct: 90  FVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEW 149

Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
           R+VVSW  +ID           + +F  M++   E +  T+ SV+RAC   G+LS+G  V
Sbjct: 150 RNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTMQSVIRACGGLGSLSLGMWV 208

Query: 226 HGIVKEK--KRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
           H  V +K  K + C   V+T L+DMY K G +E A              W ++I G A H
Sbjct: 209 HAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVH 268

Query: 284 GLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           G  K A+D F+ M +   + P+  T   VLSAC ++ +V E  M F  M K Y +EP++ 
Sbjct: 269 GKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLV 328

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC-KVHEDTERAERLMKQHLE 401
           H+GC+VDL ARAG ++EA + ++ MP+KPDAV+WR+L+ AC K H   E +E + KQ  E
Sbjct: 329 HYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFE 388

Query: 402 M-GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
             G    G+Y+L S VYAS  +W++   +R+LMN KG+ K PG S IE++GA HEF  GD
Sbjct: 389 SNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGD 448

Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLL--EIDDEEKATQLLHHSEKLALAYGL 518
            NHP++ +I+  ++E+ +KL+  GY P  S   L  EI++ ++ T  LH SE+LA+A+GL
Sbjct: 449 TNHPQSKDIYKFMNEIQEKLESVGYLPDYSGAPLIDEINEGKQNTMRLH-SERLAIAFGL 507

Query: 519 IRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           + +     IR+ KNLR C DCH+  KLIS+IY  +IIVRDR+RFHHFK+G CSC DYW
Sbjct: 508 LNSKPSMPIRVFKNLRVCNDCHKVTKLISRIYNVEIIVRDRVRFHHFKDGSCSCMDYW 565



 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 17/259 (6%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL-NSYYY 63
           ++ E  Q+HA +LKLG   +    N   L  F A    G L  AR +        N   +
Sbjct: 100 SLFEGKQVHAHVLKLGFELDTYICN--SLIHFYA--SCGYLETARKVFDRMCEWRNVVSW 155

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N M+ +Y+   D   +   L +F  M++     V  PD +T   V++ C  L     G  
Sbjct: 156 NVMIDSYAKVGD---YDIVLIMFCEMMK-----VYEPDCYTMQSVIRACGGLGSLSLGMW 207

Query: 124 LHGFITK---MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           +H F+ K        D  +   L+ MY   G L +A+++F+ M  RDV SW S+I G   
Sbjct: 208 VHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAV 267

Query: 181 HDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
           H +   A++ F RM++   +  N  T V VL AC  SG +  G     ++ ++  +E   
Sbjct: 268 HGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSL 327

Query: 240 NVSTALIDMYAKSGCIESA 258
                L+D+YA++G I+ A
Sbjct: 328 VHYGCLVDLYARAGHIQEA 346


>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
           scaffold0013:48776-47089 | 20130731
          Length = 558

 Score =  407 bits (1045), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/569 (41%), Positives = 329/569 (57%), Gaps = 16/569 (2%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLL--TSNPALNSYYYNTMLR 68
           QL A ++  G       R  +KL    ++SPSG+L+ A  +     NP  N Y  N +LR
Sbjct: 3   QLQAHLITTGKFQFHPSR--TKLLELFSVSPSGNLSLAGNIFRQIQNPTTNDY--NAILR 58

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
             + SS+PT    ++S +  ML      V   D  T  F LK CAR     +  QLH  +
Sbjct: 59  GLAQSSEPTQ---SISWYRDML----CCVQRVDALTCSFALKGCARALAFSEATQLHSQV 111

Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
            + GF +D  ++  L+ +Y+  G +  AR++FD M  RD+ SW ++I GL    RP EAI
Sbjct: 112 LRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAI 171

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
            LF RM E G   ND TV+  L AC+  GAL  G  VH  V ++K ++    V  A+IDM
Sbjct: 172 ALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHRYVLDEK-LDRNVIVCNAVIDM 230

Query: 249 YAKSGCIESAXXXXXXXX-XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           +AK G ++ A               W  MI   A +G   +A+DL   M      PD  +
Sbjct: 231 FAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVS 290

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
               L AC +A LV E   +F D+ K  G++  ++H+G +VDLL RAG LKEA + +N+M
Sbjct: 291 YLGALCACNHAGLVDEGVRLF-DLMKVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSM 349

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
           PM PD VLW++L+ ACK + + E AE   K+ +EMG + SG ++L SNVYA+  +W +  
Sbjct: 350 PMFPDVVLWQSLLGACKTYGNVEMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQRWKDVG 409

Query: 428 EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
            VRE M    + K PG S  EVDG +H+F+  D +HP +  I+ KLDE+  ++K+ GY  
Sbjct: 410 RVREAMVDSDVRKVPGFSYTEVDGRIHKFINYDQSHPNSKEIYAKLDEIKFRIKEYGYIA 469

Query: 488 KLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLIS 547
           + + VL +I DE+K   L +HSEKLA+AYGLI T  G+ I+++KNLR C DCH F+K+IS
Sbjct: 470 ETNLVLHDIGDEDKENALNYHSEKLAVAYGLISTVDGTPIQVIKNLRICVDCHAFIKIIS 529

Query: 548 KIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            IY R+IIVRDR RFH FK+G CSC+DYW
Sbjct: 530 NIYNREIIVRDRARFHRFKDGVCSCRDYW 558



 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 150/346 (43%), Gaps = 26/346 (7%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
             SEA QLH+Q+L+ G                   + +G ++YAR +       +   +N
Sbjct: 100 AFSEATQLHSQVLRFGFD----ADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWN 155

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
            M+   +  S P     A++LF     R       P++ T    L  C++L   ++G+ +
Sbjct: 156 AMISGLAQGSRPD---EAIALF----NRMKEEGWRPNDVTVLGALSACSQLGALKEGEIV 208

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLVDHDR 183
           H ++       +  + NA+I M++  G +  A  +F+ M  R  +++W ++I     +  
Sbjct: 209 HRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGD 268

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS- 242
             +A++L  RM   G   +  + +  L AC  +G +  G ++  ++K       K NV  
Sbjct: 269 GYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVSG---VKLNVKH 325

Query: 243 -TALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGLASHG---LCKEAIDLFLEME 297
             +++D+  ++G ++ A               W +++    ++G   + + A    +EM 
Sbjct: 326 YGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYGNVEMAEMASKKLVEMG 385

Query: 298 TCNVKPDERTMTAVLSA---CRNADLVREAYMVFSDMKKRYGIEPT 340
           + N   D   ++ V +A    ++   VREA MV SD++K  G   T
Sbjct: 386 S-NSSGDFVLLSNVYAAQQRWKDVGRVREA-MVDSDVRKVPGFSYT 429


>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:48574897-48578894 | 20130731
          Length = 993

 Score =  407 bits (1045), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/568 (36%), Positives = 333/568 (58%), Gaps = 16/568 (2%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+H   LK G   +    +F         S  G +  A LL  +    +   +N M+  +
Sbjct: 420 QVHTCALKAGIVLD----SFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGF 475

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           ++S +   +  AL LF  M  R        D  TF    K    L   +QGKQ+H  + K
Sbjct: 476 TVSDN---YREALRLFSLMHERGEKA----DQITFANAAKAAGCLVRLQQGKQIHAVVIK 528

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           M F  D ++++ ++ MY   G++  AR++F+++P  D V+WT++I G V++    +A+  
Sbjct: 529 MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFT 588

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALIDM 248
           + +M  AGV+ ++ T  ++++AC+   AL  G+++H  +    ++ C  +  V T+L+DM
Sbjct: 589 YHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIM---KLNCAFDPFVMTSLVDM 645

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK G IE A              W AMI GLA HG  +EA++ F EM++  V PD  T 
Sbjct: 646 YAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTF 705

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
             VLSAC ++ L  +AY  F  M+K YG+EP I+H+ C+VD L+RAG ++EAE  +++MP
Sbjct: 706 IGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMP 765

Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
            +  A ++RTL+ AC+V  D E  ER+ ++   M   DS +Y+L SN+YA+  +W N   
Sbjct: 766 FEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVS 825

Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
            R +M +  + K PG S I++   +H FV GD +H E D I+ K++ ++ ++K+EGY P 
Sbjct: 826 ARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPD 885

Query: 489 LSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISK 548
               L++I++E+K + L +HSEKLA+AYGL++T   + +R++KNLR C DCH  +K IS 
Sbjct: 886 TEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISN 945

Query: 549 IYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           ++QR+I++RD  RFHHF++G CSC DYW
Sbjct: 946 VFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 176/401 (43%), Gaps = 27/401 (6%)

Query: 11  QLHAQILKLG-----TSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           Q+H  +++ G     +  N A   + K         +G +NYAR +      ++   +NT
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVK---------AGSVNYARRMFGQMKEVDLISWNT 368

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR-QGKQL 124
           ++   + S        +L LFI +LR        PD FT   VL+ C+ L+ +   G+Q+
Sbjct: 369 VISGCARSGLEEC---SLRLFIDLLRSGL----LPDQFTITSVLRACSSLEESYCVGRQV 421

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           H    K G   D ++  ALI +YS  G +  A  LF      D+ SW +++ G    D  
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY 481

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
            EA+ LF  M E G + +  T  +  +A      L  G+++H +V  K R      V + 
Sbjct: 482 REALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI-KMRFHYDLFVISG 540

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           ++DMY K G ++SA              WT +ISG   +G  ++A+  + +M    V+PD
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 305 ERTMTAVLSACRNADLVREAYMVFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           E T   ++ AC     + +   + ++ MK     +P +     +VD+ A+ G +++A   
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGL 658

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
              M  +  A LW  +I     H + E A     +    GV
Sbjct: 659 FRRMNTRSVA-LWNAMIVGLAQHGNAEEALNFFNEMKSRGV 698



 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 138/298 (46%), Gaps = 14/298 (4%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+ T+  +L   A L     GKQ+HG + + G+     + N+ I+MY   G +  AR +F
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD-SGAL 219
            +M + D++SW ++I G         ++ LF  +L +G+  +  T+ SVLRAC+    + 
Sbjct: 356 GQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESY 415

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
            +GR+VH     K  I     VSTALID+Y+K G +E A              W AM+ G
Sbjct: 416 CVGRQVH-TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHG 474

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR-----EAYMVFSDMKKR 334
                  +EA+ LF  M     K D+ T      A     LVR     + + V   M+  
Sbjct: 475 FTVSDNYREALRLFSLMHERGEKADQITFANAAKAA--GCLVRLQQGKQIHAVVIKMRFH 532

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
           Y +         ++D+  + G +K A    N +P  PD V W T+I  C  + + E+A
Sbjct: 533 YDLFV----ISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQA 585



 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 146/370 (39%), Gaps = 45/370 (12%)

Query: 43  GDLNYARLLLTSNPALNS--YYYNTMLRAYSLSSD-----PTHH-FHALSLFIFMLRRPT 94
           G L  AR L    P  +     YN +L AY+ + +      TH  FH     IF L R +
Sbjct: 62  GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFH-----IFRLLRQS 116

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
             V      T   + K C         + L G+  K+G   D ++  AL+++Y+ F  + 
Sbjct: 117 --VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIR 174

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            AR LFDRMP RDVV W  ++   V+     E + LF     +G+  +  +V ++L    
Sbjct: 175 EARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL---- 230

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
               + +G+K    V E++  + +   +   +       C + +              W 
Sbjct: 231 ----MGVGKKT---VFERELEQVRAYATKLFV-------CDDDS----------DVTVWN 266

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
             +S     G   EA+D F +M    V  D  T   +LS   + + +     +   +  R
Sbjct: 267 KTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV-VR 325

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
           +G +  +      +++  +AG +  A      M  + D + W T+I  C      E + R
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGCARSGLEECSLR 384

Query: 395 LMKQHLEMGV 404
           L    L  G+
Sbjct: 385 LFIDLLRSGL 394



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 8/251 (3%)

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           A +LF    D DV  W   +   +      EA++ F  M+++ V  +  T + +L   A 
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
              L +G+++HG V  +   +   +V+ + I+MY K+G +  A              W  
Sbjct: 310 LNHLELGKQIHGAVV-RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNT 368

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK-- 333
           +ISG A  GL + ++ LF+++    + PD+ T+T+VL AC +   + E+Y V   +    
Sbjct: 369 VISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCA 425

Query: 334 -RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
            + GI         ++D+ ++ G ++EAE   +      D   W  ++    V ++   A
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDNYREA 484

Query: 393 ERLMKQHLEMG 403
            RL     E G
Sbjct: 485 LRLFSLMHERG 495



 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 9/200 (4%)

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP--DRDVVSWTSLIDG- 177
           GK+ H  I   G   D Y+ N LI MY+  G L  AR+LFD  P  DRD+V++ +++   
Sbjct: 32  GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91

Query: 178 -----LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEK 232
                L D ++  EA  +F  + ++ +     T+  + + C   G+ S    + G    K
Sbjct: 92  AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV-K 150

Query: 233 KRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
             ++    V+ AL+++YAK   I  A              W  M+      G   E + L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210

Query: 293 FLEMETCNVKPDERTMTAVL 312
           F       ++PD  ++  +L
Sbjct: 211 FSAFHRSGLRPDCVSVRTIL 230


>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:48574897-48577818 | 20130731
          Length = 973

 Score =  406 bits (1044), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/568 (36%), Positives = 333/568 (58%), Gaps = 16/568 (2%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+H   LK G   +    +F         S  G +  A LL  +    +   +N M+  +
Sbjct: 420 QVHTCALKAGIVLD----SFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGF 475

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           ++S +   +  AL LF  M  R        D  TF    K    L   +QGKQ+H  + K
Sbjct: 476 TVSDN---YREALRLFSLMHERGEKA----DQITFANAAKAAGCLVRLQQGKQIHAVVIK 528

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           M F  D ++++ ++ MY   G++  AR++F+++P  D V+WT++I G V++    +A+  
Sbjct: 529 MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFT 588

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALIDM 248
           + +M  AGV+ ++ T  ++++AC+   AL  G+++H  +    ++ C  +  V T+L+DM
Sbjct: 589 YHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIM---KLNCAFDPFVMTSLVDM 645

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK G IE A              W AMI GLA HG  +EA++ F EM++  V PD  T 
Sbjct: 646 YAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTF 705

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
             VLSAC ++ L  +AY  F  M+K YG+EP I+H+ C+VD L+RAG ++EAE  +++MP
Sbjct: 706 IGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMP 765

Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
            +  A ++RTL+ AC+V  D E  ER+ ++   M   DS +Y+L SN+YA+  +W N   
Sbjct: 766 FEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVS 825

Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
            R +M +  + K PG S I++   +H FV GD +H E D I+ K++ ++ ++K+EGY P 
Sbjct: 826 ARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPD 885

Query: 489 LSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISK 548
               L++I++E+K + L +HSEKLA+AYGL++T   + +R++KNLR C DCH  +K IS 
Sbjct: 886 TEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISN 945

Query: 549 IYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           ++QR+I++RD  RFHHF++G CSC DYW
Sbjct: 946 VFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  127 bits (318), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 176/401 (43%), Gaps = 27/401 (6%)

Query: 11  QLHAQILKLG-----TSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           Q+H  +++ G     +  N A   + K         +G +NYAR +      ++   +NT
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVK---------AGSVNYARRMFGQMKEVDLISWNT 368

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR-QGKQL 124
           ++   + S        +L LFI +LR        PD FT   VL+ C+ L+ +   G+Q+
Sbjct: 369 VISGCARSGLEEC---SLRLFIDLLRSGL----LPDQFTITSVLRACSSLEESYCVGRQV 421

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           H    K G   D ++  ALI +YS  G +  A  LF      D+ SW +++ G    D  
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY 481

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
            EA+ LF  M E G + +  T  +  +A      L  G+++H +V  K R      V + 
Sbjct: 482 REALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI-KMRFHYDLFVISG 540

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           ++DMY K G ++SA              WT +ISG   +G  ++A+  + +M    V+PD
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 305 ERTMTAVLSACRNADLVREAYMVFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           E T   ++ AC     + +   + ++ MK     +P +     +VD+ A+ G +++A   
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGL 658

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
              M  +  A LW  +I     H + E A     +    GV
Sbjct: 659 FRRMNTRSVA-LWNAMIVGLAQHGNAEEALNFFNEMKSRGV 698



 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 138/298 (46%), Gaps = 14/298 (4%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+ T+  +L   A L     GKQ+HG + + G+     + N+ I+MY   G +  AR +F
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD-SGAL 219
            +M + D++SW ++I G         ++ LF  +L +G+  +  T+ SVLRAC+    + 
Sbjct: 356 GQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESY 415

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
            +GR+VH     K  I     VSTALID+Y+K G +E A              W AM+ G
Sbjct: 416 CVGRQVH-TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHG 474

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR-----EAYMVFSDMKKR 334
                  +EA+ LF  M     K D+ T      A     LVR     + + V   M+  
Sbjct: 475 FTVSDNYREALRLFSLMHERGEKADQITFANAAKAA--GCLVRLQQGKQIHAVVIKMRFH 532

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
           Y +         ++D+  + G +K A    N +P  PD V W T+I  C  + + E+A
Sbjct: 533 YDLFV----ISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQA 585



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 146/370 (39%), Gaps = 45/370 (12%)

Query: 43  GDLNYARLLLTSNPALNS--YYYNTMLRAYSLSSD-----PTHH-FHALSLFIFMLRRPT 94
           G L  AR L    P  +     YN +L AY+ + +      TH  FH     IF L R +
Sbjct: 62  GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFH-----IFRLLRQS 116

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
             V      T   + K C         + L G+  K+G   D ++  AL+++Y+ F  + 
Sbjct: 117 --VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIR 174

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            AR LFDRMP RDVV W  ++   V+     E + LF     +G+  +  +V ++L    
Sbjct: 175 EARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL---- 230

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
               + +G+K    V E++  + +   +   +       C + +              W 
Sbjct: 231 ----MGVGKKT---VFERELEQVRAYATKLFV-------CDDDS----------DVTVWN 266

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
             +S     G   EA+D F +M    V  D  T   +LS   + + +     +   +  R
Sbjct: 267 KTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV-VR 325

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
           +G +  +      +++  +AG +  A      M  + D + W T+I  C      E + R
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGCARSGLEECSLR 384

Query: 395 LMKQHLEMGV 404
           L    L  G+
Sbjct: 385 LFIDLLRSGL 394



 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 8/251 (3%)

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           A +LF    D DV  W   +   +      EA++ F  M+++ V  +  T + +L   A 
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
              L +G+++HG V  +   +   +V+ + I+MY K+G +  A              W  
Sbjct: 310 LNHLELGKQIHGAVV-RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNT 368

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK-- 333
           +ISG A  GL + ++ LF+++    + PD+ T+T+VL AC +   + E+Y V   +    
Sbjct: 369 VISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCA 425

Query: 334 -RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
            + GI         ++D+ ++ G ++EAE   +      D   W  ++    V ++   A
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDNYREA 484

Query: 393 ERLMKQHLEMG 403
            RL     E G
Sbjct: 485 LRLFSLMHERG 495



 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 9/200 (4%)

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP--DRDVVSWTSLIDG- 177
           GK+ H  I   G   D Y+ N LI MY+  G L  AR+LFD  P  DRD+V++ +++   
Sbjct: 32  GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91

Query: 178 -----LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEK 232
                L D ++  EA  +F  + ++ +     T+  + + C   G+ S    + G    K
Sbjct: 92  AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV-K 150

Query: 233 KRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
             ++    V+ AL+++YAK   I  A              W  M+      G   E + L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210

Query: 293 FLEMETCNVKPDERTMTAVL 312
           F       ++PD  ++  +L
Sbjct: 211 FSAFHRSGLRPDCVSVRTIL 230


>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:48574897-48577818 | 20130731
          Length = 973

 Score =  406 bits (1044), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/568 (36%), Positives = 333/568 (58%), Gaps = 16/568 (2%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+H   LK G   +    +F         S  G +  A LL  +    +   +N M+  +
Sbjct: 420 QVHTCALKAGIVLD----SFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGF 475

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           ++S +   +  AL LF  M  R        D  TF    K    L   +QGKQ+H  + K
Sbjct: 476 TVSDN---YREALRLFSLMHERGEKA----DQITFANAAKAAGCLVRLQQGKQIHAVVIK 528

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           M F  D ++++ ++ MY   G++  AR++F+++P  D V+WT++I G V++    +A+  
Sbjct: 529 MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFT 588

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALIDM 248
           + +M  AGV+ ++ T  ++++AC+   AL  G+++H  +    ++ C  +  V T+L+DM
Sbjct: 589 YHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIM---KLNCAFDPFVMTSLVDM 645

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK G IE A              W AMI GLA HG  +EA++ F EM++  V PD  T 
Sbjct: 646 YAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTF 705

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
             VLSAC ++ L  +AY  F  M+K YG+EP I+H+ C+VD L+RAG ++EAE  +++MP
Sbjct: 706 IGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMP 765

Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
            +  A ++RTL+ AC+V  D E  ER+ ++   M   DS +Y+L SN+YA+  +W N   
Sbjct: 766 FEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVS 825

Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
            R +M +  + K PG S I++   +H FV GD +H E D I+ K++ ++ ++K+EGY P 
Sbjct: 826 ARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPD 885

Query: 489 LSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISK 548
               L++I++E+K + L +HSEKLA+AYGL++T   + +R++KNLR C DCH  +K IS 
Sbjct: 886 TEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISN 945

Query: 549 IYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           ++QR+I++RD  RFHHF++G CSC DYW
Sbjct: 946 VFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  127 bits (318), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 176/401 (43%), Gaps = 27/401 (6%)

Query: 11  QLHAQILKLG-----TSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           Q+H  +++ G     +  N A   + K         +G +NYAR +      ++   +NT
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVK---------AGSVNYARRMFGQMKEVDLISWNT 368

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR-QGKQL 124
           ++   + S        +L LFI +LR        PD FT   VL+ C+ L+ +   G+Q+
Sbjct: 369 VISGCARSGLEEC---SLRLFIDLLRSGL----LPDQFTITSVLRACSSLEESYCVGRQV 421

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           H    K G   D ++  ALI +YS  G +  A  LF      D+ SW +++ G    D  
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY 481

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
            EA+ LF  M E G + +  T  +  +A      L  G+++H +V  K R      V + 
Sbjct: 482 REALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI-KMRFHYDLFVISG 540

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           ++DMY K G ++SA              WT +ISG   +G  ++A+  + +M    V+PD
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 305 ERTMTAVLSACRNADLVREAYMVFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           E T   ++ AC     + +   + ++ MK     +P +     +VD+ A+ G +++A   
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGL 658

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
              M  +  A LW  +I     H + E A     +    GV
Sbjct: 659 FRRMNTRSVA-LWNAMIVGLAQHGNAEEALNFFNEMKSRGV 698



 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 138/298 (46%), Gaps = 14/298 (4%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+ T+  +L   A L     GKQ+HG + + G+     + N+ I+MY   G +  AR +F
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD-SGAL 219
            +M + D++SW ++I G         ++ LF  +L +G+  +  T+ SVLRAC+    + 
Sbjct: 356 GQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESY 415

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
            +GR+VH     K  I     VSTALID+Y+K G +E A              W AM+ G
Sbjct: 416 CVGRQVH-TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHG 474

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR-----EAYMVFSDMKKR 334
                  +EA+ LF  M     K D+ T      A     LVR     + + V   M+  
Sbjct: 475 FTVSDNYREALRLFSLMHERGEKADQITFANAAKAA--GCLVRLQQGKQIHAVVIKMRFH 532

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
           Y +         ++D+  + G +K A    N +P  PD V W T+I  C  + + E+A
Sbjct: 533 YDLFV----ISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQA 585



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 146/370 (39%), Gaps = 45/370 (12%)

Query: 43  GDLNYARLLLTSNPALNS--YYYNTMLRAYSLSSD-----PTHH-FHALSLFIFMLRRPT 94
           G L  AR L    P  +     YN +L AY+ + +      TH  FH     IF L R +
Sbjct: 62  GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFH-----IFRLLRQS 116

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
             V      T   + K C         + L G+  K+G   D ++  AL+++Y+ F  + 
Sbjct: 117 --VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIR 174

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            AR LFDRMP RDVV W  ++   V+     E + LF     +G+  +  +V ++L    
Sbjct: 175 EARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL---- 230

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
               + +G+K    V E++  + +   +   +       C + +              W 
Sbjct: 231 ----MGVGKKT---VFERELEQVRAYATKLFV-------CDDDS----------DVTVWN 266

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
             +S     G   EA+D F +M    V  D  T   +LS   + + +     +   +  R
Sbjct: 267 KTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV-VR 325

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
           +G +  +      +++  +AG +  A      M  + D + W T+I  C      E + R
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGCARSGLEECSLR 384

Query: 395 LMKQHLEMGV 404
           L    L  G+
Sbjct: 385 LFIDLLRSGL 394



 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 8/251 (3%)

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           A +LF    D DV  W   +   +      EA++ F  M+++ V  +  T + +L   A 
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
              L +G+++HG V  +   +   +V+ + I+MY K+G +  A              W  
Sbjct: 310 LNHLELGKQIHGAVV-RFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNT 368

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK-- 333
           +ISG A  GL + ++ LF+++    + PD+ T+T+VL AC +   + E+Y V   +    
Sbjct: 369 VISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCA 425

Query: 334 -RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
            + GI         ++D+ ++ G ++EAE   +      D   W  ++    V ++   A
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDNYREA 484

Query: 393 ERLMKQHLEMG 403
            RL     E G
Sbjct: 485 LRLFSLMHERG 495



 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 9/200 (4%)

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP--DRDVVSWTSLIDG- 177
           GK+ H  I   G   D Y+ N LI MY+  G L  AR+LFD  P  DRD+V++ +++   
Sbjct: 32  GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91

Query: 178 -----LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEK 232
                L D ++  EA  +F  + ++ +     T+  + + C   G+ S    + G    K
Sbjct: 92  AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV-K 150

Query: 233 KRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
             ++    V+ AL+++YAK   I  A              W  M+      G   E + L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210

Query: 293 FLEMETCNVKPDERTMTAVL 312
           F       ++PD  ++  +L
Sbjct: 211 FSAFHRSGLRPDCVSVRTIL 230


>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:39629093-39627012 | 20130731
          Length = 626

 Score =  404 bits (1037), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 331/601 (55%), Gaps = 49/601 (8%)

Query: 10  LQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
           LQ+HA +++    ++    NF     +++L   G LNY+  L       + Y + +++ A
Sbjct: 41  LQIHASLVRRNL-DDHTILNFKLQRRYSSL---GHLNYSVTLFNRTRNRDVYTWTSIIHA 96

Query: 70  YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
           ++ S        ALS +  ML   TH +  P+ FTF  +L       +    K +H  + 
Sbjct: 97  HTQSKLNDQ---ALSYYAQML---THRI-QPNAFTFSSLLNGSTIQPI----KSIHCHVI 145

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP------------------------- 164
           K G  SD Y+   L+  Y+  GD   A +LFD+MP                         
Sbjct: 146 KFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARL 205

Query: 165 -------DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
                  +RDVV W  +IDG   +  P E + LF RML   V+ N  T++ VL +C   G
Sbjct: 206 LFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVG 265

Query: 218 ALSMGRKVHGIVKEKK--RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
           AL  GR VH  +K  K   +  +  V TAL+DMY K G +E A              W +
Sbjct: 266 ALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNS 325

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
           MI G A +GL +EA+ LF EM    V+P   T  A+L+AC ++ LV + + +F+ MK  Y
Sbjct: 326 MIMGYAVNGLSEEALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEY 385

Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
            +EP ++HFGC+V+LL RAG L+EA D + +M + PD V+W TL+WAC++H +    E +
Sbjct: 386 KMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLHNNISLGEEI 445

Query: 396 MKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHE 455
            +  L   +  SG+Y+L SN+YA+ G W   A+VR LM   G+ K PG S IEV+  +HE
Sbjct: 446 AEFLLSNDLASSGTYVLLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCSIIEVNNRVHE 505

Query: 456 FVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALA 515
           F+ GD  HP++ +I++ L+EM   LK +GY PK   VL +I +E+K   L  HSEKLALA
Sbjct: 506 FIAGDLKHPKSKDIYLMLEEMNSWLKGKGYTPKTDVVLHDIGEEQKELSLEVHSEKLALA 565

Query: 516 YGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
           +GLI T  G+ ++IVKNLR C DCH  MK+ISKI  R I++RDR RFHHF NG CSC D+
Sbjct: 566 FGLISTRPGTTVKIVKNLRVCLDCHAVMKMISKITGRRIVMRDRNRFHHFDNGSCSCGDF 625

Query: 576 W 576
           W
Sbjct: 626 W 626


>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:20818019-20812038 | 20130731
          Length = 1056

 Score =  404 bits (1037), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/605 (37%), Positives = 348/605 (57%), Gaps = 45/605 (7%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           ++++  Q HA ++   T+    P   +K     AL+    L YA  L    P  + + YN
Sbjct: 24  SINQIKQTHANLIT--TAQITLPVIANKFLKNVALA---SLTYAHKLFDQIPQPDLFIYN 78

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
           TM++++S+S  P  +  ++++F  ++R   +    P+ ++F F    C      R+G+Q+
Sbjct: 79  TMIKSHSMS--PHSYLDSIAVFRSLIRDSGY---FPNRYSFVFAFGACGNGMCVREGEQV 133

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD---- 180
                K+G   + +++NALI M+  +G +  AR +FD   DRD  SW ++I   V     
Sbjct: 134 FTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNM 193

Query: 181 ----------HDRPV-----------------EAIELFGRMLEAGVEVNDATVVSVLRAC 213
                     H+R V                 EA++ F +ML++ V+ N+ T+VS L AC
Sbjct: 194 VLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAAC 253

Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX- 272
           ++  AL  G+ +H  ++ +  I+    +  +LIDMYAK G I+SA               
Sbjct: 254 SNLVALDQGKWIHVYIR-RDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWP 312

Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
           W AMI G A HG  +EAI++F +M+   V P++ T  A+L+AC +  +V+E    F  M 
Sbjct: 313 WNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMA 372

Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
             YGI P I+H+GC+VDLL+R+G LK++E+ + +MPM PD  +W  L+ AC++++D ER 
Sbjct: 373 SDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERG 432

Query: 393 ERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN-KKGLIKPPGSSRIEVDG 451
            R+ +   E+  +  G  +L  N+Y++ G+W+    VRE         K PG S IE++G
Sbjct: 433 YRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSSIELNG 492

Query: 452 ALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE-KATQLLHHSE 510
             HEF++GD +HP++  I+  LDEM+ KLK  GY P+L EVLL+ DDEE K T L  HSE
Sbjct: 493 VFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLLDFDDEEDKETALSVHSE 552

Query: 511 KLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDC 570
           KLA+A+GL+ T+ G+ IRIVKNLR C DCH+  K ISK+Y R IIVRDR+R+HHFK+G C
Sbjct: 553 KLAIAFGLMNTAPGTPIRIVKNLRVCGDCHQATKFISKVYDRVIIVRDRMRYHHFKDGIC 612

Query: 571 SCKDY 575
           SCKDY
Sbjct: 613 SCKDY 617


>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:17991225-17993175 | 20130731
          Length = 586

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/575 (38%), Positives = 322/575 (56%), Gaps = 27/575 (4%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPS-GDLNYARLLLTSNPALNSYY 62
           TT+ E  Q+ A  +K    NN      +K   F   +P+   + +A  L       N   
Sbjct: 37  TTLKELKQIQAYTIKTNYQNN--TNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVL 94

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +NTM R Y+  +DP             LR  TH         F   L+  +++K   +GK
Sbjct: 95  FNTMARGYARLNDP-------------LRMITH---------FRRCLRLVSKVKALAEGK 132

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           QLH F  K+G   + Y++  LI+MY+  GD+  +R +FD++ +  VV++ ++I  L  ++
Sbjct: 133 QLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNN 192

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
           R  EA+ LF  + E G++  D T++ VL +CA  G+L +GR +H  VK K   +    V+
Sbjct: 193 RANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVK-KYGFDRYVKVN 251

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           T LIDMYAK G ++ A              W+A+I   A+HG   +AI +  EM+   V+
Sbjct: 252 TTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQ 311

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PDE T   +L AC +  LV E +  F  M   YGI P+I+H+GC+VDLL RAG L EA  
Sbjct: 312 PDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYK 371

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGK 422
           F++ +P+KP  +LWRTL+ AC  H + E  +R++++  E+     G Y++ SN+ A  GK
Sbjct: 372 FIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGK 431

Query: 423 WSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKK 482
           W +   +R+ M  KG +K PG S IEV+  +HEF  G+  H  +  +   LDE+V +LK 
Sbjct: 432 WDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKS 491

Query: 483 EGYNPKLSEVLL-EIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHE 541
            GY P  S V   +++DEEK   L +HSEKLA+ +GL+ T  G+ IR+VKNLR C DCH 
Sbjct: 492 AGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHN 551

Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
             K IS I+ R II+RD  RFHHFK+G CSC DYW
Sbjct: 552 AAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 146/357 (40%), Gaps = 56/357 (15%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPA 57
           +V  ++E  QLH   +KLG S+N        ++    L    +  GD++ +R +      
Sbjct: 124 KVKALAEGKQLHCFAVKLGVSDN--------MYVVPTLINMYTACGDIDASRRVFDKIDE 175

Query: 58  LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL 117
                YN ++ + + ++       AL+LF    R        P + T   VL  CA L  
Sbjct: 176 PCVVAYNAIIMSLARNNRAN---EALALF----RELQEIGLKPTDVTMLVVLSSCALLGS 228

Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
              G+ +H ++ K GF     +   LI MY+  G L  A  +F  MP RD  +W+++I  
Sbjct: 229 LDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVA 288

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV-------HGIVK 230
              H    +AI +   M +  V+ ++ T + +L AC+ +G +  G +        +GIV 
Sbjct: 289 YATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVP 348

Query: 231 EKKRIECKCNVSTALIDMYAKSGCIESAXXXX-XXXXXXXXXXWTAMISGLASHGLCKEA 289
             K   C       ++D+  ++G ++ A               W  ++S  ++HG     
Sbjct: 349 SIKHYGC-------MVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHG----- 396

Query: 290 IDLFLEMETCNVKPDERTMTAV--LSACRNADLVREAYMVFSDMKKRYGIEPTIQHF 344
                     NV+  +R +  +  L      D     Y++FS++  RYG    + H 
Sbjct: 397 ----------NVEMGKRVIERIFELDDSHGGD-----YVIFSNLCARYGKWDDVNHL 438


>Medtr3g052720.1 | organelle transcript processing protein, putative
           | HC | chr3:20868148-20864227 | 20130731
          Length = 1150

 Score =  400 bits (1028), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/494 (41%), Positives = 288/494 (58%), Gaps = 32/494 (6%)

Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDL---------GV---- 155
           +  C  L   R G+ +HG   K+G      + NALIH+YS  G++         GV    
Sbjct: 315 ISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDL 374

Query: 156 ------------------ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
                             A++LFD M ++DVVSW+++I G   H    EA+ LF  M   
Sbjct: 375 VSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLL 434

Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
           G+  ++  +VSV+ AC    AL +G+ +H  +  K        + T L+DMY K GC+E+
Sbjct: 435 GIRPDETAIVSVISACTHMAALDLGKWIHAYIS-KNEFNVNVILGTTLVDMYMKCGCVEN 493

Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
           A              W A+I GLA +GL ++++++F +M+     P+E T   VL ACR+
Sbjct: 494 ALEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRH 553

Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
             LV E    FS M + + IEP ++H+GC+VDLL RAG LKEAE+ + +MPM PD   W 
Sbjct: 554 MGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWG 613

Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
            L+ AC+ H + E  ERL ++ +++  D  G ++L SN+YAS G W +  E+R +M + G
Sbjct: 614 ALLGACRKHHNNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGDVLEIRGIMAQHG 673

Query: 438 LIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEID 497
           ++K PG S IE +G +HEF+ GD  HP+  +I   L+E+  KLK EGY P  SEV L+ID
Sbjct: 674 VVKMPGCSMIEANGIVHEFLAGDKTHPQIKDIEHMLNEVAAKLKIEGYAPITSEVSLDID 733

Query: 498 DEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVR 557
           +EEK T L  HSEKLA+A+GLI     + IRI+KNLR C DCH  +KLISK + R+I+VR
Sbjct: 734 EEEKETALFSHSEKLAVAFGLITIPLPAPIRIIKNLRICNDCHTVVKLISKAFDREIVVR 793

Query: 558 DRIRFHHFKNGDCS 571
           DR RFHHFK+G CS
Sbjct: 794 DRHRFHHFKHGSCS 807



 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 185/459 (40%), Gaps = 110/459 (23%)

Query: 31  SKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY-SLSSDPTHHFHALSLFIFM 89
           S+L  F+  S      Y+  +       N++ +NT++R++  L + P    +   LF+F 
Sbjct: 80  SRLVNFSTHSNFIPFQYSLKIFNHLHNPNTFIWNTIMRSHLELHNSPQQALNFYKLFLFQ 139

Query: 90  LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV 149
                    +PD++T+P +L+ C       +GKQ+H  + K GF SD Y+ N LI++Y+V
Sbjct: 140 -------NTSPDHYTYPILLRSCTARVSEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAV 192

Query: 150 FGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA------------------IELF 191
            G++  A ++F      D+VSW +L+ G V+    VEA                  I LF
Sbjct: 193 CGNMVSAHKVFKESVVLDLVSWNTLLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLF 252

Query: 192 G--------RMLEAGVEVNDATVVSVLRACADS--------------------------- 216
           G        R L   +E  D    S + +C +                            
Sbjct: 253 GKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVV 312

Query: 217 ---------GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG-------------- 253
                     A+ MGR VHG+   K  I+   ++  ALI +Y+  G              
Sbjct: 313 SAISACTSLSAVRMGRSVHGLAA-KIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVL 371

Query: 254 ---------------C--IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
                          C  +E A              W+AMISG A HG   EA+ LF EM
Sbjct: 372 LDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEM 431

Query: 297 ETCNVKPDERTMTAVLSACRNA---DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLAR 353
           +   ++PDE  + +V+SAC +    DL +  +   S  K  + +   +     +VD+  +
Sbjct: 432 QLLGIRPDETAIVSVISACTHMAALDLGKWIHAYIS--KNEFNVNVILG--TTLVDMYMK 487

Query: 354 AGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
            GC++ A +   AM  K  +  W  LI    ++   E++
Sbjct: 488 CGCVENALEVFYAMEEKGVST-WNALILGLAMNGLVEKS 525



 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 34/217 (15%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD      V+  C  +     GK +H +I+K  F  +  +   L+ MY   G +  A E+
Sbjct: 438 PDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEV 497

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F  M ++ V +W +LI GL  +    +++ +F  M +     N+ T + VL AC   G +
Sbjct: 498 FYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLV 557

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             GR+    + ++ +IE        ++D+  ++                           
Sbjct: 558 DEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRA--------------------------- 590

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR 316
               GL KEA +L   +E+  + PD  T  A+L ACR
Sbjct: 591 ----GLLKEAEEL---IESMPMAPDVATWGALLGACR 620


>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:44861451-44859606 | 20130731
          Length = 554

 Score =  396 bits (1018), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/575 (38%), Positives = 327/575 (56%), Gaps = 25/575 (4%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           M    +LHA ++K G   N  P +    F   +  P+     A +LL      + + YNT
Sbjct: 1   MIRVYKLHATLIKTGQHQN--PHSLRPFFLTCSNYPAAARYAATVLLRLPTPPDPFSYNT 58

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           +++  S    PT    A+SLF  M R   + VP  D+FTFP +LK      L        
Sbjct: 59  IIKHVS----PTG---AISLFSHMHR---NSVPF-DHFTFPLILKHHHHHLLHSL----- 102

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
             I K+GF ++ ++ NALI+ Y   G L VA +LFD M  RD+VSW++LI  LV ++ P 
Sbjct: 103 --IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPA 160

Query: 186 EAIELFGRMLEAGVEVND----ATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
           EA+ +F +M     ++ +    A ++SV+ A +  G + +G  VH  +  +  I     +
Sbjct: 161 EALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIV-RMGIVMTVPL 219

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
            TALI+MY++ G I+ +              WTA+I+GLA HG  +EA+ +F EM+   +
Sbjct: 220 GTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGL 279

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KPD      VL AC +  LV + + VF  M+  +GI+P ++H+GC+VDLL RAG + EA 
Sbjct: 280 KPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAF 339

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           DF+  MP+KP++V+WRTL+ AC  H     AE+  ++ +E+     G Y+L SN Y  VG
Sbjct: 340 DFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVG 399

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
            W  KA +R  M +  ++K PG S + +D  +HEFV GD+ HP+ + I   L  ++D +K
Sbjct: 400 NWGGKAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVK 459

Query: 482 KEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHE 541
             GY P  S VL +I DEEK   L +HSEKLA+A+ L+       IR++KNLR C DCH+
Sbjct: 460 LGGYTPNTSSVLHDIQDEEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCHD 519

Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           FMK  S I+ RDII+RDR RFHHF  G CSC+D+W
Sbjct: 520 FMKHASGIFDRDIIIRDRNRFHHFSKGLCSCQDFW 554


>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:32273955-32271537 | 20130731
          Length = 672

 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/575 (37%), Positives = 320/575 (55%), Gaps = 18/575 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSYYYNTM 66
           Q+H Q    G          S +F  +AL    S  G LN AR L    P  N   + +M
Sbjct: 107 QIHQQAFVFGYG--------SDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 67  LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP----DNFTFPFVLKCCARLKLARQGK 122
           +  Y  +            F+ +       +       D+     V+  CAR+ +    +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
            +HG   K GF     + N L+  Y+  G++ V+R++FD M + DV SW SLI     + 
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278

Query: 183 RPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
             VEA  LF  M++ G V  N  T+ +VL ACA SGAL +G+ +H  V  K  +E    V
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVV-KMELEDNLVV 337

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
            T+++DMY K G +E A              WT M++G   HG  KEA+ +F EM  C +
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  +VL+AC +A L++E +  F+ MK  + +EP I+H+ C+VDLL RAG LKEA 
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
             +  M +KPD ++W +L+ AC++H++ E  E   ++  ++   + G Y+L SN+YA  G
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
           +W +   +R LM   GL+K PG S +E  G +H F++GD  HP+ + I+  LDE+  KL+
Sbjct: 518 RWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQ 577

Query: 482 KEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHE 541
           + GY P ++ VL ++D EEK   L  HSEKLA+A+G++ +  GS I+I+KNLR C DCH 
Sbjct: 578 EVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHF 637

Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            +KLISKI  R+I++RD  RFHHFK+G CSC DYW
Sbjct: 638 AIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  129 bits (324), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 175/371 (47%), Gaps = 24/371 (6%)

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
           Y +N+++  ++ S D      AL  F  M +   H    P+  TFP  +K C+ L     
Sbjct: 52  YSWNSIIADFARSGDS---LQALYAFSSMRKLSLH----PNRSTFPCTIKSCSSLYDLCA 104

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           GKQ+H      G+GSD ++ +ALI MYS  G L  AR+LFD +P+R+VVSWTS+I G V 
Sbjct: 105 GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQ 164

Query: 181 HDRPVEAIELFGRML----------EAGVEVNDATVVS-VLRACADSGALSMGRKVHGIV 229
           ++R  EA+ LF   L                 D+ ++  V+ ACA     S+   VHG+ 
Sbjct: 165 NERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLA 224

Query: 230 KEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEA 289
             KK  E    V   L+D YAK G I  +              W ++I+  A +GL  EA
Sbjct: 225 V-KKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEA 283

Query: 290 IDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
             LF +M +   V+ +  T++AVL AC ++  ++    +  D   +  +E  +     +V
Sbjct: 284 FSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCI-HDQVVKMELEDNLVVGTSIV 342

Query: 349 DLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
           D+  + G ++ A    + +  K +   W  ++    +H   + A ++  + +  G+    
Sbjct: 343 DMYCKCGRVEMARKAFDRLKRK-NVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP-- 399

Query: 409 SYILASNVYAS 419
           +YI   +V A+
Sbjct: 400 NYITFVSVLAA 410



 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 21/239 (8%)

Query: 157 RELFDRMPDR-DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           R +F +  D+  V SW S+I         ++A+  F  M +  +  N +T    +++C+ 
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 216 SGALSMGRKVHG---IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
              L  G+++H    +      I     V++ALIDMY+K G +  A              
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDI----FVASALIDMYSKCGYLNDARKLFDEIPERNVVS 154

Query: 273 WTAMISGLASHGLCKEAIDLFL-----------EMETCNVKPDERTMTAVLSACRNADLV 321
           WT+MISG   +   +EA+ LF            E+    V  D   +  V+SAC     V
Sbjct: 155 WTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV-CV 213

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           +        +  + G E  +     ++D  A+ G +  +    + M  + D   W +LI
Sbjct: 214 KSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLI 271


>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:32273955-32271537 | 20130731
          Length = 672

 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/575 (37%), Positives = 320/575 (55%), Gaps = 18/575 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSYYYNTM 66
           Q+H Q    G          S +F  +AL    S  G LN AR L    P  N   + +M
Sbjct: 107 QIHQQAFVFGYG--------SDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 67  LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP----DNFTFPFVLKCCARLKLARQGK 122
           +  Y  +            F+ +       +       D+     V+  CAR+ +    +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
            +HG   K GF     + N L+  Y+  G++ V+R++FD M + DV SW SLI     + 
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278

Query: 183 RPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
             VEA  LF  M++ G V  N  T+ +VL ACA SGAL +G+ +H  V  K  +E    V
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVV-KMELEDNLVV 337

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
            T+++DMY K G +E A              WT M++G   HG  KEA+ +F EM  C +
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  +VL+AC +A L++E +  F+ MK  + +EP I+H+ C+VDLL RAG LKEA 
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
             +  M +KPD ++W +L+ AC++H++ E  E   ++  ++   + G Y+L SN+YA  G
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
           +W +   +R LM   GL+K PG S +E  G +H F++GD  HP+ + I+  LDE+  KL+
Sbjct: 518 RWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQ 577

Query: 482 KEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHE 541
           + GY P ++ VL ++D EEK   L  HSEKLA+A+G++ +  GS I+I+KNLR C DCH 
Sbjct: 578 EVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHF 637

Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            +KLISKI  R+I++RD  RFHHFK+G CSC DYW
Sbjct: 638 AIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  129 bits (324), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 175/371 (47%), Gaps = 24/371 (6%)

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
           Y +N+++  ++ S D      AL  F  M +   H    P+  TFP  +K C+ L     
Sbjct: 52  YSWNSIIADFARSGDS---LQALYAFSSMRKLSLH----PNRSTFPCTIKSCSSLYDLCA 104

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           GKQ+H      G+GSD ++ +ALI MYS  G L  AR+LFD +P+R+VVSWTS+I G V 
Sbjct: 105 GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQ 164

Query: 181 HDRPVEAIELFGRML----------EAGVEVNDATVVS-VLRACADSGALSMGRKVHGIV 229
           ++R  EA+ LF   L                 D+ ++  V+ ACA     S+   VHG+ 
Sbjct: 165 NERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLA 224

Query: 230 KEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEA 289
             KK  E    V   L+D YAK G I  +              W ++I+  A +GL  EA
Sbjct: 225 V-KKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEA 283

Query: 290 IDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
             LF +M +   V+ +  T++AVL AC ++  ++    +  D   +  +E  +     +V
Sbjct: 284 FSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCI-HDQVVKMELEDNLVVGTSIV 342

Query: 349 DLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
           D+  + G ++ A    + +  K +   W  ++    +H   + A ++  + +  G+    
Sbjct: 343 DMYCKCGRVEMARKAFDRLKRK-NVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP-- 399

Query: 409 SYILASNVYAS 419
           +YI   +V A+
Sbjct: 400 NYITFVSVLAA 410



 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 21/239 (8%)

Query: 157 RELFDRMPDR-DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           R +F +  D+  V SW S+I         ++A+  F  M +  +  N +T    +++C+ 
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 216 SGALSMGRKVHG---IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
              L  G+++H    +      I     V++ALIDMY+K G +  A              
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDI----FVASALIDMYSKCGYLNDARKLFDEIPERNVVS 154

Query: 273 WTAMISGLASHGLCKEAIDLFL-----------EMETCNVKPDERTMTAVLSACRNADLV 321
           WT+MISG   +   +EA+ LF            E+    V  D   +  V+SAC     V
Sbjct: 155 WTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV-CV 213

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           +        +  + G E  +     ++D  A+ G +  +    + M  + D   W +LI
Sbjct: 214 KSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLI 271


>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:35708903-35705786 | 20130731
          Length = 616

 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/610 (37%), Positives = 327/610 (53%), Gaps = 52/610 (8%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNF--SKLFTFAALSPSGDLN-YARLLLTSNPALNS 60
           TT++ A QLHA I +    NN    ++  + L  F    P   ++ Y  LL +   + N 
Sbjct: 22  TTLNHAKQLHAHIYR----NNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNP 77

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
           + Y+ ++RAY+  + P HH  ++ L+  ML        +P +FTF  +    + LK    
Sbjct: 78  FLYSALIRAYA-RNGPFHH--SIRLYTSMLNNNV----SPVSFTFSALF---SLLKNPSL 127

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWT-------- 172
           G QLH      GF +D Y+ N +IHMY  FG L  AR++FD MP RDVV+WT        
Sbjct: 128 GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYAR 187

Query: 173 -----------------------SLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
                                  S++ G   +  P +A++ F +M EAGV  ++ T+V  
Sbjct: 188 SGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGA 247

Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNV--STALIDMYAKSGCIESAXXXXXXXXX 267
           + ACA  G       +  I  E  R     NV   +ALIDMY+K G +E A         
Sbjct: 248 ISACAQLGVSGYADWIREIA-ESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKE 306

Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
                +++MI G A HG  + AI LF EM    +KP+  T   + +AC +A +V +   +
Sbjct: 307 MNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQL 366

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           F  MK+ YG+ PT  H+ C+ DLL RAG L++A   +  MPM+P+  +W  L+ A  +H 
Sbjct: 367 FGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHG 426

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
           + + AE   +   E+  D+ G+Y+L S  YA   KW + + VR+LM +K L K PG S +
Sbjct: 427 NPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWV 486

Query: 448 EV-DGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLL 506
           E  +G +HEF  GD  HPE + I   LD+++ +LK  GY PKL+ V  +IDDE K   L+
Sbjct: 487 EAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLV 546

Query: 507 HHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFK 566
            HSEKLALAYGL+ T  GS I+I+KNLR CEDCH  M   SK+  R IIVRD +RFHHF 
Sbjct: 547 SHSEKLALAYGLLSTDAGSTIKIMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFL 606

Query: 567 NGDCSCKDYW 576
           NG CSC ++W
Sbjct: 607 NGACSCNNFW 616


>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:18562024-18564318 | 20130731
          Length = 740

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 216/585 (36%), Positives = 339/585 (57%), Gaps = 30/585 (5%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLT--SNPALNSYYYNTMLR 68
           Q+H QI+  G S          L     +S   +L YA  +    SNP +  + YNT++ 
Sbjct: 167 QIHTQIITTGLSFQTYC-----LSHLIKISSKFNLPYAFKIFNYISNPTI--FLYNTLIS 219

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK-CCARLKLARQGKQLHGF 127
           +    ++      A SL+  +L   T+    P++FTFP + K CC+       G  LH  
Sbjct: 220 SLINQTNQNQIHLAFSLYNKIL---TNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTH 276

Query: 128 ITK-MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV------- 179
           + K +    D ++  +L++ Y+ +G + V+R +FDR+ + D+ +W  +++          
Sbjct: 277 VLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHS 336

Query: 180 ------DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
                 D D  +E++ LF  M   G+  N+ T+V+++ AC++ GA+S G  VH  V   K
Sbjct: 337 YSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNK 396

Query: 234 RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX--WTAMISGLASHGLCKEAID 291
            I+    V TA +DMY+K GC+  A                +TAMI G A HG   +A++
Sbjct: 397 -IKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALE 455

Query: 292 LFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
           L+ +M+   + PD  T    + AC +  LV E   +F  MK+ +G+EP ++H+GC++DLL
Sbjct: 456 LYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLL 515

Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYI 411
            RAG LKEAE+++  MPMKP+AVLWR+L+ A ++H +    E  + + +E+  + SG+Y+
Sbjct: 516 GRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYV 575

Query: 412 LASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFV 471
           L SN+YASVG+ ++   VR+LM   G+ K PG S +E+ GA+HEF+ GD +HP +  I++
Sbjct: 576 LLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYL 635

Query: 472 KLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVK 531
           K+ E+  +L++ G+  + SE L ++++E+K   L +HSE+LA+A+ LI +     IRI+K
Sbjct: 636 KIAEINSRLEEYGHKARTSEALFDLEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIK 695

Query: 532 NLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           NLR C DCH F KLIS  Y R+IIVRDR RFHHFK+G CSC DYW
Sbjct: 696 NLRVCGDCHAFTKLISVAYHREIIVRDRNRFHHFKDGSCSCLDYW 740


>Medtr2g101710.1 | PPR containing plant protein | HC |
           chr2:43758970-43756533 | 20130731
          Length = 620

 Score =  388 bits (997), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/566 (37%), Positives = 326/566 (57%), Gaps = 13/566 (2%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLHAQ   LG + N      +KL    A+S S  L  AR L    P  N + +N ++R Y
Sbjct: 68  QLHAQFYHLGIAYNQDLA--TKLVHLYAVSNS--LLNARNLFDKIPKQNLFLWNVLIRGY 123

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           + +     H +A+ L+  ML    +G+  PDNFT PFVLK C+ L    +G+ +H ++ K
Sbjct: 124 AWNGP---HDNAIILYHKML---DYGL-RPDNFTLPFVLKACSALSAIGEGRSIHEYVIK 176

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
            G+  D ++  ALI MY+  G +  A  +FD++  RD V W S++     +  P E+I L
Sbjct: 177 SGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISL 236

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
              M   GV   +AT+V+V+ + AD   L  GR++HG    +   +    V TALIDMYA
Sbjct: 237 CREMAANGVRPTEATLVTVISSSADVACLPYGREIHGF-GWRHGFQSNDKVKTALIDMYA 295

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           K G ++ A              W A+I+G A HGL   A+DLF +M   + +PD  T   
Sbjct: 296 KCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVG 354

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           VL+AC    L+ E   +++ M + YGI PT+QH+ C++DLL   G L EA D +  M +K
Sbjct: 355 VLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVK 414

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
           PD+ +W  L+ +CK+H + E AE  +++ +E+  DDSG+Y++ +N+YA  GKW    ++R
Sbjct: 415 PDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLR 474

Query: 431 ELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLS 490
           ++M  K + K    S IEV   ++ F+ GD +H  +D I+ +L  +   + + GY P   
Sbjct: 475 QVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTG 534

Query: 491 EVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIY 550
            V  +++++EK + +  HSE+LA+A+GLI TS G+++ I KNLR CEDCH  +K ISKI 
Sbjct: 535 SVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIM 594

Query: 551 QRDIIVRDRIRFHHFKNGDCSCKDYW 576
           +R+I VRD  R+H FK+G CSC D+W
Sbjct: 595 EREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 6/291 (2%)

Query: 98  PAPD-NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
           P P  ++ +  +L+ C   K    GKQLH     +G   +  +   L+H+Y+V   L  A
Sbjct: 42  PQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNA 101

Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
           R LFD++P +++  W  LI G   +     AI L+ +ML+ G+  ++ T+  VL+AC+  
Sbjct: 102 RNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSAL 161

Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
            A+  GR +H  V  K   E    V  ALIDMYAK GC+  A              W +M
Sbjct: 162 SAIGEGRSIHEYVI-KSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSM 220

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY-MVFSDMKKRY 335
           ++  A +G   E+I L  EM    V+P E T+  V+S+  +AD+    Y         R+
Sbjct: 221 LAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS--SADVACLPYGREIHGFGWRH 278

Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           G +   +    ++D+ A+ G +K A      +  K   V W  +I    +H
Sbjct: 279 GFQSNDKVKTALIDMYAKCGSVKVALALFERLREK-RVVSWNAIITGYAMH 328


>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38095334-38099255 | 20130731
          Length = 653

 Score =  387 bits (995), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/532 (39%), Positives = 305/532 (57%), Gaps = 13/532 (2%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
           L  A+++    P  N   + TM+ AYS +     +  A+ L +FM+R    GV  P+ +T
Sbjct: 135 LEEAQMVFDKMPERNVVSWTTMISAYSYAK---LNDRAMKLLVFMIR---DGV-MPNMYT 187

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
           F  VL+ C RL      KQ+H  I K G  SD ++ +ALI  YS  G+L  A  +F  M 
Sbjct: 188 FSSVLRACERLC---DLKQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMV 244

Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
             D V W S+I     H    EA+ L+  M   G   + +T+ SVLRAC  S  L +GR+
Sbjct: 245 TGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQ 304

Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
           VH  V    + +    ++ AL+DMY K G +E A              W+ MISGLA +G
Sbjct: 305 VHVHVL---KFDQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNG 361

Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHF 344
              EA++LF  M+    +P+  T+  VL AC +A LV E +  F  MK  YGI+P  +H+
Sbjct: 362 FSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHY 421

Query: 345 GCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
            C++DLL RAG L E    ++ M  +PD V WRTL+ AC+   + + A    K+ L++  
Sbjct: 422 SCLLDLLGRAGKLDEMVKLIHEMTCEPDVVTWRTLLDACRAQRNVDLATYAAKEILKLDQ 481

Query: 405 DDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHP 464
            D+G+Y+L SN+YA+  +W + AEVR  M+ +G+ K PG S IEV+  +H F++GD +HP
Sbjct: 482 QDAGAYVLLSNIYANSKRWDDVAEVRRTMSARGIRKEPGCSWIEVNNQIHAFIVGDKSHP 541

Query: 465 EADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQG 524
           + D I  KLDE + KL   GY P  + +L +++ E+    L HHSEKLA+ +G+I   + 
Sbjct: 542 QIDEINRKLDEYIRKLTDAGYVPDTNFMLKDLEGEQSEYSLRHHSEKLAIVFGIISFPRE 601

Query: 525 SKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
             IRI KNL+ C DCH F KLI+K+ QR I++RD IR+HHF++G CSC DYW
Sbjct: 602 KTIRIWKNLKICGDCHIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 653



 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 138/281 (49%), Gaps = 10/281 (3%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D   +  ++KCC   K  R+GK++H  I   G+    +++N L++MY     L  A+ +F
Sbjct: 83  DAIAYSELIKCCLAHKAVREGKRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVF 142

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           D+MP+R+VVSWT++I           A++L   M+  GV  N  T  SVLRAC     L 
Sbjct: 143 DKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRACERLCDL- 201

Query: 221 MGRKVH-GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             ++VH GI+K    +E    V +ALID Y+K G +  A              W ++I+ 
Sbjct: 202 --KQVHSGILKAG--LESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAA 257

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            A H    EA+ L+  M       D+ T+T+VL AC  + L+     V   + K    + 
Sbjct: 258 FAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLK---FDQ 314

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
            +     ++D+  + G L++A+   + M +K D + W T+I
Sbjct: 315 DLILNNALLDMYCKCGSLEDAKFIFSRMAVK-DVISWSTMI 354



 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 9/227 (3%)

Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
           +SL++   + D P  A+++   M + GV  +      +++ C    A+  G++VH  +  
Sbjct: 54  SSLLNHCYNRDLP-RAMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKRVHNHIFS 112

Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAID 291
                 K  +   L++MY K   +E A              WT MIS  +   L   A+ 
Sbjct: 113 NG-YRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMK 171

Query: 292 LFLEMETCNVKPDERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDL 350
           L + M    V P+  T ++VL AC R  DL +    V S + K  G+E  +     ++D 
Sbjct: 172 LLVFMIRDGVMPNMYTFSSVLRACERLCDLKQ----VHSGILKA-GLESDVFVRSALIDA 226

Query: 351 LARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
            ++ G L EA      M +  D+V+W ++I A   H D + A  L K
Sbjct: 227 YSKLGELLEAVGVFREM-VTGDSVVWNSIIAAFAQHSDGDEALALYK 272


>Medtr5g006420.1 | organelle transcript processing protein, putative
           | HC | chr5:911890-915336 | 20130731
          Length = 726

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/606 (36%), Positives = 329/606 (54%), Gaps = 43/606 (7%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           +V+  +  L++H    KLG    D P  F +    A  +    +  ARLL       ++ 
Sbjct: 133 KVSAFNHGLEIHGLASKLGFV--DDP--FIQTGLIAMYASCRRIMDARLLFDKMCHPDAV 188

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            +N ++  Y  +    H+  AL LF  M          PD+     VL  C        G
Sbjct: 189 AWNMIIDGYCQNG---HYDDALRLFEDMRSSDM----KPDSVILCTVLSACGHAGNLSYG 241

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL---------------------- 159
           + +H F+   G+  D ++  ALI+MY+  G + +AR++                      
Sbjct: 242 RTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKL 301

Query: 160 ---------FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
                    FD+M +RD+V W+++I G  + D+P EA++LF  ML+     +  T++SV+
Sbjct: 302 GMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVI 361

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
            AC+  GAL+    +H  V ++       +V+ ALIDMYAK G +  A            
Sbjct: 362 SACSHVGALAQANWIHTYV-DRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNV 420

Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
             W++MI+  A HG    AI LF  M+  N++P+  T   VL AC +A LV E   +FS 
Sbjct: 421 ISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSS 480

Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
           M   +GI PT +H+GC+VDL  RA  L++A + +  MP  P+ ++W +L+ AC+VH + E
Sbjct: 481 MINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAE 540

Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
             E   K+ LE+  D  G+ ++ SN+YA   +W++   +R+ M+ KG+ K   SSRIE++
Sbjct: 541 LGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEIN 600

Query: 451 GALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSE 510
             +H F+M D  H ++D I+ KLDE+V KLK  GY P  S +L+++++E+K   +L HSE
Sbjct: 601 NQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSE 660

Query: 511 KLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDC 570
           KLA+ YGLI     S IRIVKNLR CEDCH FMKL+SK+YQ +I+VRDR RFHH   G C
Sbjct: 661 KLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGIC 720

Query: 571 SCKDYW 576
           SC+DYW
Sbjct: 721 SCRDYW 726



 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 203/430 (47%), Gaps = 40/430 (9%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKL--FTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
           Q+HAQIL   T+  +     SKL        S S  L+YA  + +  P  ++++ N +LR
Sbjct: 34  QIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQLLR 93

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
             S SS P       ++F++   R  +   A D F+FP +LK  +++     G ++HG  
Sbjct: 94  HLSRSSFPEK-----TIFLYHNLRAINAF-ALDRFSFPSLLKAVSKVSAFNHGLEIHGLA 147

Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
           +K+GF  D +I   LI MY+    +  AR LFD+M   D V+W  +IDG   +    +A+
Sbjct: 148 SKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDAL 207

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK------------RIE 236
            LF  M  + ++ +   + +VL AC  +G LS GR +H  VK+               + 
Sbjct: 208 RLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMY 267

Query: 237 CKCN------------------VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
             C                   VSTA++  YAK G ++ A              W+AMIS
Sbjct: 268 ANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMIS 327

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
           G A     +EA+ LF EM      PD+ TM +V+SAC +   + +A  + + +  R G  
Sbjct: 328 GYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYV-DRSGFG 386

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
             +     ++D+ A+ G L +A +    MP K + + W ++I A  +H + + A +L ++
Sbjct: 387 RALSVNNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGNADSAIKLFRR 445

Query: 399 HLEMGVDDSG 408
             E+ ++ +G
Sbjct: 446 MKEVNIEPNG 455


>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:1841187-1847304 | 20130731
          Length = 880

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/533 (38%), Positives = 306/533 (57%), Gaps = 7/533 (1%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +  AR L    P  +++ +N ++  Y        +  AL LF  M    +      + 
Sbjct: 143 GRIEQARKLFDEMPHRDNFSWNAVISGYVSQG---WYMEALDLFRMMQENESSNC---NM 196

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           FT    L   A +   R+GK++HG++ + G   D  +  AL+ +Y   G L  AR +FD+
Sbjct: 197 FTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQ 256

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M D+D+VSWT++I    +  R  E   LF  ++ +GV  N+ T   VL ACAD  A  MG
Sbjct: 257 MADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMG 316

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
           ++VHG +  +   +     ++AL+ +Y+K G  E+A              WT++I G A 
Sbjct: 317 KEVHGYMT-RVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQ 375

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           +G    A+  F  +     KPDE T   VLSAC +A LV      F  +K+++G+  T  
Sbjct: 376 NGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTAD 435

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
           H+ CV+DLLAR+G  KEAE+ ++ MPMKPD  LW +L+  C++H + E AER  K   E+
Sbjct: 436 HYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFEL 495

Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
             ++  +YI  SN+YA+ G W+ + +VR  M+ +G++K PG S IE+   +H F++GD +
Sbjct: 496 EPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTS 555

Query: 463 HPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTS 522
           HP+  +I   L E+  K+K+EGY    + VL ++++E+K   + +HSEKLA+A+G+I TS
Sbjct: 556 HPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTS 615

Query: 523 QGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
            G+ I++ KNLR+C DCH  MK ISKI QR IIVRD  RFH F +G CSCKDY
Sbjct: 616 PGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  106 bits (265), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 135/325 (41%), Gaps = 49/325 (15%)

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
           H +P P    +  ++  C R +    GK++H       F     I N LIHMY+  G L 
Sbjct: 56  HRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLV 115

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-------------------- 194
            A+ LFD +P +D+ SW ++I G  +  R  +A +LF  M                    
Sbjct: 116 DAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGW 175

Query: 195 -LEA-----------GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
            +EA               N  T+ S L A A   +L  G+++HG +  +  +E    V 
Sbjct: 176 YMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLI-RSGLELDEVVW 234

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           TAL+D+Y K G +  A              WT MI      G  KE   LF ++    V+
Sbjct: 235 TALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVR 294

Query: 303 PDERTMTAVLSACRNADLVRE-------AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
           P+E T   VL+AC  ADL  E        YM       R G +P       +V + ++ G
Sbjct: 295 PNEYTFAGVLNAC--ADLAAEQMGKEVHGYMT------RVGYDPFSFAASALVHVYSKCG 346

Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLI 380
             + A    N MP +PD V W +LI
Sbjct: 347 NTETARRVFNQMP-RPDLVSWTSLI 370


>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:21515828-21518970 | 20130731
          Length = 616

 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/571 (37%), Positives = 318/571 (55%), Gaps = 14/571 (2%)

Query: 8   EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
           E  ++HA ++K        P  F +       +    L  A  +    P  N   +  M+
Sbjct: 58  EGQRVHAHMIK----TRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMI 113

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
            AYS     +    AL+LF+ MLR  T     P+ FTF  VL  C        G+Q+H  
Sbjct: 114 SAYSQRGYASQ---ALNLFLQMLRSGTE----PNEFTFATVLTSCTSSLGFILGRQIHSL 166

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           I K+ +    ++ ++L+ MY+  G +  AR +F+ +P+RDVVS T++I G        EA
Sbjct: 167 IIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEA 226

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           +ELF R+   G++ N  T   VL A +   AL +G++VH  V  +  I     +  +LID
Sbjct: 227 LELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVL-RSEIPSFVVLQNSLID 285

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDER 306
           MY+K G +  +              W AM+ G + HG  +E + LF  M E   VKPD  
Sbjct: 286 MYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSV 345

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKK-RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
           T+ AVLS C +  L  +   +F+DM   +  +EP ++H+GCVVDLL R+G ++EA +F+ 
Sbjct: 346 TILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIK 405

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
            MP +P A +W +L+ AC+VH + +  E   +Q LE+   ++G+Y++ SN+YAS G+W +
Sbjct: 406 KMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWED 465

Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
            + +R+LM KK + K PG S IE+D  LH F   D +HP  + I +K+ E+    K+ GY
Sbjct: 466 VSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGY 525

Query: 486 NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKL 545
            P LS VL ++D+E+K   LL HSEKLAL++GLI +     IR++KNLR C DCH F K 
Sbjct: 526 VPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKY 585

Query: 546 ISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           ISK+Y R++ +RD+ RFH    G CSC+DYW
Sbjct: 586 ISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 616



 Score =  120 bits (300), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 1/207 (0%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           +L  C   +  R+G+++H  + K  +    ++   LI +Y+    LG A  +FD MP+R+
Sbjct: 46  ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 105

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
           VVSWT++I          +A+ LF +ML +G E N+ T  +VL +C  S    +GR++H 
Sbjct: 106 VVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIHS 165

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
           ++  K   E    V ++L+DMYAK G I  A               TA+ISG A  GL +
Sbjct: 166 LII-KLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDE 224

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSA 314
           EA++LF  ++   +K +  T T VL+A
Sbjct: 225 EALELFRRLQGEGMKSNYVTYTGVLTA 251


>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:41831683-41828172 | 20130731
          Length = 811

 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/537 (39%), Positives = 303/537 (56%), Gaps = 8/537 (1%)

Query: 40  SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
           + SG++  A+ L    P  +   ++ M+  Y+ S        AL LF+ M  R T  VP 
Sbjct: 283 AKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKE---ALDLFLRM--RQTSVVP- 336

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
            +NFTF  VL+ CA       GKQ+H  + K G  S+ ++ NA++ +Y+  G++  + +L
Sbjct: 337 -NNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKL 395

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+ +PDR+ V+W ++I G V       A+ LF  MLE  ++  + T  SVLRA A   AL
Sbjct: 396 FEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAAL 455

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G ++H +   K        V+ +LIDMYAK G I  A              W AMI G
Sbjct: 456 EPGLQIHSLTI-KTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICG 514

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            + HG+  EA++LF  M+  + KP++ T   VLSAC NA L+ +    F  M K Y I+P
Sbjct: 515 YSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKP 574

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            I+H+ C+V LL R G   EA   +  +  +P  ++WR L+ AC +H+  +      +  
Sbjct: 575 CIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHV 634

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           LEM   D  +++L SN+YA+ G+W N A VR+ M KK + K PG S +E  G +H F +G
Sbjct: 635 LEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVG 694

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
           D +HP+   I   L+ +  K +  GY P  + VLL++ D+EK   L  HSE+LALAYGLI
Sbjct: 695 DTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLI 754

Query: 520 RTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           RT     IRI+KNLR C DCH  MKLISK+ QR+I++RD  RFHHF++G CSC DYW
Sbjct: 755 RTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  153 bits (387), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 185/391 (47%), Gaps = 14/391 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
            LH  ILK GTS +   +N   L  F   S S  L  A  L    P  N+  + T+ + Y
Sbjct: 56  HLHCHILKRGTSLDLFAQNI--LLNFYVQSNS--LQDASKLFDEMPQTNTISFVTLAQGY 111

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           S      H FH    FI  + +  H V   + F F  +LK    + LA     LH  + K
Sbjct: 112 S----RDHQFHQALHFILRIFKEGHEV---NPFVFTTLLKLLVSMDLAHLCWTLHACVYK 164

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           +G  +D ++  ALI  YSV G++ VAR +FD +  +D+VSWT ++    ++    E+++L
Sbjct: 165 LGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQL 224

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F +M   G + N+ T+   L++C    A ++G+ VHG    K   +    V  AL+++YA
Sbjct: 225 FNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCAL-KGCYDHDLFVGIALLELYA 283

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           KSG I  A              W+ MI+  A     KEA+DLFL M   +V P+  T  +
Sbjct: 284 KSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFAS 343

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           VL AC ++  +     + S + K +G+   +     ++D+ A+ G ++ +      +P +
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDR 402

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
            D V W T+I       D ERA  L    LE
Sbjct: 403 ND-VTWNTIIVGYVQLGDGERAMNLFTHMLE 432



 Score =  135 bits (340), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 185/393 (47%), Gaps = 18/393 (4%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
           LHA + KLG  + DA   F       A S  G+++ AR +       +   +  M+  Y+
Sbjct: 158 LHACVYKLG-HHADA---FVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYA 213

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
            +      F+  SL +F   R       P+NFT    LK C  L+    GK +HG   K 
Sbjct: 214 ENC-----FYEESLQLFNQMRIMG--YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKG 266

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
            +  D ++  AL+ +Y+  G++  A+ LF+ MP  D++ W+ +I      DR  EA++LF
Sbjct: 267 CYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLF 326

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
            RM +  V  N+ T  SVL+ACA S +L +G+++H  V  K  +     VS A++D+YAK
Sbjct: 327 LRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL-KFGLNSNVFVSNAIMDVYAK 385

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
            G IE++              W  +I G    G  + A++LF  M   +++P E T ++V
Sbjct: 386 CGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSV 445

Query: 312 LSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           L A  +   +     + S  +K  Y  +  +     ++D+ A+ G + +A    + M  K
Sbjct: 446 LRASASLAALEPGLQIHSLTIKTMYNKDTVVA--NSLIDMYAKCGRINDARLTFDKMN-K 502

Query: 371 PDAVLWRTLIWACKVHEDTERAERL--MKQHLE 401
            D V W  +I    +H  +  A  L  M QH +
Sbjct: 503 RDEVSWNAMICGYSMHGMSMEALNLFDMMQHTD 535



 Score = 83.2 bits (204), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 115/270 (42%), Gaps = 23/270 (8%)

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           GK LH  I K G   D +  N L++ Y     L  A +LFD MP  + +S+ +L  G   
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
             +  +A+    R+ + G EVN     ++L+         +   +H  V +         
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGH-HADAF 172

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           V TALID Y+  G ++ A              WT M++  A +   +E++ LF +M    
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC----------VVDL 350
            KP+  T++  L +C    L  EA+ V    K  +G        GC          +++L
Sbjct: 233 YKPNNFTISGALKSC----LGLEAFNV---GKSVHGCALK----GCYDHDLFVGIALLEL 281

Query: 351 LARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
            A++G + +A+     MP K D + W  +I
Sbjct: 282 YAKSGEIIDAQRLFEEMP-KTDLIPWSLMI 310


>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:24361845-24364937 | 20130731
          Length = 975

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/540 (36%), Positives = 316/540 (58%), Gaps = 8/540 (1%)

Query: 37  AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
           A  +  G L+YA  +     +     +N ++  +  +  P     AL L++ M       
Sbjct: 444 AGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRK---ALDLYLLMRGSGLE- 499

Query: 97  VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
              PD FT   +L  CARLK    GK++HG + + GF  D +I  +L+ +Y   G + +A
Sbjct: 500 ---PDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLA 556

Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
           +  FD M ++++V W ++I+G   ++ P +A+++F +ML + +  ++ +++  L AC+  
Sbjct: 557 KLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV 616

Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
            AL +G+++H    +    E    V+ +LIDMYAK GC+E +              W  +
Sbjct: 617 SALRLGKELHCFAVKSHLTE-HSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVL 675

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           I+G   HG  ++AI+LF  M+    +PD  T  A+L+AC +A LV E       M+  +G
Sbjct: 676 ITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFG 735

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           I+P ++H+ CVVD+L RAG L EA + +N +P KPD+ +W +L+ +C+ + D +  E++ 
Sbjct: 736 IKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVA 795

Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
            + LE+G D + +Y+L SN YA +GKW    ++R+ M + GL K  G S IE+ G +  F
Sbjct: 796 NKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRF 855

Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAY 516
           ++GD +  ++  I     E+  K+ K GY P  S VL E++++EK   L +HSEKLA+++
Sbjct: 856 LVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISF 915

Query: 517 GLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           GL+ T++G+ +R+ KNLR C DCH  +KL+SKI +R+IIVRD  RFHHFKNG CSC DYW
Sbjct: 916 GLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 17/272 (6%)

Query: 50  LLLTSNPALNSYYYNTMLRAY---SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFP 106
           L+  ++   N + +N +L  Y   SL  D      A+ +F+ M+         PDNFT P
Sbjct: 150 LVFNASRRKNLFLWNALLSGYLRNSLFRD------AVFVFVEMISLTEF---VPDNFTLP 200

Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
            V+K C  +   R G+ +HGF  K    SD ++ NALI MY  FG +  A ++FD+MP R
Sbjct: 201 CVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQR 260

Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEA--GVEVNDATVVSVLRACADSGALSMGRK 224
           ++VSW S++   +++    E+  LF  +L    G+  + AT+V+V+  CA  G + +G  
Sbjct: 261 NLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMV 320

Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
            HG+   K  +  +  V+++L+DMY+K G +  A              W +MI G +   
Sbjct: 321 FHGLAL-KLGLCGELKVNSSLLDMYSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDR 378

Query: 285 LCKEAIDLFLEMETCN-VKPDERTMTAVLSAC 315
             + A +L  +M+  + VK +E T+  VL  C
Sbjct: 379 DFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410



 Score =  113 bits (282), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 8/284 (2%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD  T   V+  CAR    R G   HG   K+G   +  + ++L+ MYS  G L  AR L
Sbjct: 297 PDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVL 356

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGA 218
           FD   +++V+SW S+I G         A EL  +M +E  V+VN+ T+++VL  C +   
Sbjct: 357 FD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQ 415

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
               +++HG       I+    V+ A +  YAK G +  A              W A+I 
Sbjct: 416 FLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIG 475

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
           G   +G  ++A+DL+L M    ++PD  T+ ++LSAC     +     +   M  R G E
Sbjct: 476 GHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSM-LRNGFE 534

Query: 339 PTIQHFGCV--VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
             +  F C+  V L  + G +  A+ F + M  K + V W T+I
Sbjct: 535 --LDEFICISLVSLYVQCGKILLAKLFFDNMEEK-NLVCWNTMI 575



 Score = 86.3 bits (212), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 155/357 (43%), Gaps = 18/357 (5%)

Query: 56  PALNSYYYNTMLRAYSLSSDPTHHFHAL-------SLFIFMLRRPTHGVPAPDN---FTF 105
           P  +S+ ++ ++ ++    + + HFH L         F F+       V + ++      
Sbjct: 37  PPKSSHLFSPIISSHKKQQNASKHFHNLCNTGNLNQAFNFLQSNLNDVVSSSNSKPKQLI 96

Query: 106 PFVLKCCARLKLARQGKQLHGFI-TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
             +L+ C   K    G+++H FI T   F +D  ++  L+ MYS+      +  +F+   
Sbjct: 97  GLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASR 156

Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGR 223
            +++  W +L+ G + +    +A+ +F  M+     V D  T+  V++AC     + +G 
Sbjct: 157 RKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGE 216

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
            VHG    K ++     V  ALI MY K G +ESA              W +++     +
Sbjct: 217 AVHGFAL-KTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275

Query: 284 GLCKEAIDLFLEMETCN--VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
           G+ +E+  LF  +   +  + PD  TM  V+  C     VR   MVF  +  + G+   +
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLG-MVFHGLALKLGLCGEL 334

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
           +    ++D+ ++ G L EA    +    + + + W ++I       D   A  L+++
Sbjct: 335 KVNSSLLDMYSKCGYLCEARVLFDT--NEKNVISWNSMIGGYSKDRDFRGAFELLRK 389


>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:40268645-40272453 | 20130731
          Length = 678

 Score =  377 bits (969), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/477 (39%), Positives = 286/477 (59%), Gaps = 1/477 (0%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD F    VL+ CARL     G+ +   + + G   + ++  +L+ MY+  G +  AR +
Sbjct: 203 PDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFV 262

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           FD M ++D+V W+++I G   +  P EAIELF  M +  V  +   +V  L +CA  GAL
Sbjct: 263 FDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGAL 322

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
            +G    G++  ++ +     + T+LID YAK G +E A              + A+ISG
Sbjct: 323 ELGNWAKGLMNYEEFLSNPV-LGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISG 381

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
           LA +G    A  +F +M    + P+E T   +L  C +A LV +    F+ M   + + P
Sbjct: 382 LAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTP 441

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
           TI+H+GC+VDLLARAG L EA + +  MPMK + ++W +L+  C++H +T+ AE ++KQ 
Sbjct: 442 TIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQL 501

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           +E+   +SG Y+L SN+Y++  +W    ++R  +N+KG+ K PG S +EVDG +HEF++G
Sbjct: 502 IELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVG 561

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
           D +HP +  I+ KL+ +   LK+ GYNP    VL ++++EEK   L  HSEKLA+A+ LI
Sbjct: 562 DTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALI 621

Query: 520 RTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            T     IR+VKNLR C DCHE +K ISK+  R+I++RD  RFH F +G CSC+DYW
Sbjct: 622 STGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678



 Score =  170 bits (431), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 197/394 (50%), Gaps = 16/394 (4%)

Query: 13  HAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPA-LNSYYYNTMLRAYS 71
           H ++L+L   +++   +   +   + ++ S +  Y  L+    P   N++ YNTM+R   
Sbjct: 24  HCRLLRLNLHHDN---DLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGM- 79

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
           +S D  ++  A+ L+  M +        PD+FTF FVLK CARL L   G  +H  + K 
Sbjct: 80  VSKDRFNN--AVHLYASMHKAAI----VPDSFTFSFVLKACARLNLFHLGVMIHSLVFKT 133

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
           GF  D ++   ++  YS  G L  A ++FD M  ++VVSWT +I G ++  +  EA++LF
Sbjct: 134 GFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLF 193

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
             +LE+G+  +   +V VLRACA  G L  GR +   ++E   +     V+T+L+DMY K
Sbjct: 194 RGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECG-LSRNVFVATSLVDMYTK 252

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
            G +E A              W+AMI G AS+GL +EAI+LF EM   NV+PD   M   
Sbjct: 253 CGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGA 312

Query: 312 LSACRNADLVREAYMVFSDMK-KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           LS+C +   +         M  + +   P +     ++D  A+ G ++EA      M  K
Sbjct: 313 LSSCASLGALELGNWAKGLMNYEEFLSNPVLG--TSLIDFYAKCGSMEEALGVYKMMKEK 370

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
            D V++  +I    ++     A  +  Q  + G+
Sbjct: 371 -DRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGI 403


>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
           scaffold0493:2001-4149 | 20130731
          Length = 611

 Score =  377 bits (968), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/614 (36%), Positives = 327/614 (53%), Gaps = 64/614 (10%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGD-LNYARLLLTSNPALNSYY 62
           TT+    Q+H  +   G   +  P  F KL    A+S S   LNY+  L    P  +++ 
Sbjct: 21  TTLKTTKQIHTHLYVTGLHTH--PFFFGKLLLNCAVSISDHVLNYSLRLFHHFPNPDTFM 78

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA-RQG 121
           YNT++R+ S SS P     +L  FI +LR PT     PD+F+F F LK  A    + RQG
Sbjct: 79  YNTLIRSLSHSSTP---LSSLQPFIQLLRHPT---LLPDSFSFAFTLKGIANDGCSKRQG 132

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVV------------ 169
            QLH    + GF    ++   LI MY+  G    AR++FD M   +VV            
Sbjct: 133 IQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRC 192

Query: 170 --------------------------SWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVND 203
                                     SW+++I G        +A   F  +L      ++
Sbjct: 193 GMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSE 252

Query: 204 ATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXX 263
            ++  VL ACA +GA   G+ +HG + EK    C  +V+ ALID Y+K G ++ A     
Sbjct: 253 VSLTGVLSACAQAGAFEFGKILHGFM-EKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN 311

Query: 264 XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVRE 323
                           LA HG   EAI +F EME   V+PD  T  ++L AC ++ LV +
Sbjct: 312 I--------------SLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQ 357

Query: 324 AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
              +FS M+  YGIEP I+H+GC+VDL  RA  L++A +F+  MP+ P+ ++WRTL+ AC
Sbjct: 358 GCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGAC 417

Query: 384 KVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPG 443
            +H + E AE +  +  EM  ++SG ++L SNVYA  GKW + A +R  M ++ + K PG
Sbjct: 418 SIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPG 477

Query: 444 SSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK-KEGYNPKLSEVLLEIDDEEKA 502
            S IE+D   + FV G+  +        KL E++ +L+ +EGY P++  VL ++++EEK 
Sbjct: 478 WSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRSVLHDVEEEEKE 537

Query: 503 TQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRF 562
             +  HSEKLA A+G+ +  +G  +RIVKNLR C DCH  MKLISK+YQ +IIVRDR RF
Sbjct: 538 DSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRF 597

Query: 563 HHFKNGDCSCKDYW 576
           H FK G CSC+DYW
Sbjct: 598 HSFKGGFCSCRDYW 611


>Medtr1g059720.1 | organelle transcript processing protein, putative
           | HC | chr1:25973337-25971195 | 20130731
          Length = 574

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/567 (37%), Positives = 312/567 (55%), Gaps = 14/567 (2%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+HA  L  GT NN    N  KL  F     +  +N A  L    P  +   ++ M+  +
Sbjct: 21  QVHANALINGTFNNLIVAN--KLLHFYVQHKA--INDAYYLFDEMPTRDPTTWSIMVGGF 76

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           S   D  + +   + F  +LR        PDN+T PFV++ C   K  + G+ +H  + K
Sbjct: 77  SKLGDYNNCY---ATFREILRCNI----TPDNYTLPFVIRACRDRKDIQMGRMIHDVVLK 129

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
            G   D ++   L+ MY+    +  AR+LFD M  +D+V+WT +I    D+D   E++ L
Sbjct: 130 YGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYD-AYESLVL 188

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F R+ E G   +   +V+V+ ACA  GA+   R V+  +     +     + TA+IDMYA
Sbjct: 189 FDRLREEGFVSDKVAMVTVVNACAKLGAMHRARFVNEYICGNG-LSLDVILGTAMIDMYA 247

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           K GC++SA              W+AMI+    HG  KEA+DLF  M +C + P+  T  +
Sbjct: 248 KCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVS 307

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           +L AC ++ L  E    F  M + YG+ P ++H+ CVVDLL RAG L EA   +  M ++
Sbjct: 308 LLYACSHSGLTDEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVE 367

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
            D  LW  L+ AC+VH + E A ++ +  LE+   + G Y+L SN+YA  GKW    E R
Sbjct: 368 KDERLWSALLGACRVHGNMELAGKVAESLLELQPKNPGIYVLLSNIYAKAGKWEKVGEFR 427

Query: 431 ELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLS 490
           +LM ++ L K PG + IEVD   ++F +GD +HP++  I+  L  ++ KL+  GY P   
Sbjct: 428 DLMTQRKLKKVPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLTSVIKKLEMVGYVPDTE 487

Query: 491 EVLLEIDDEEKATQLLHHSEKLALAYGLIRT-SQGSKIRIVKNLRSCEDCHEFMKLISKI 549
            VL ++++E K   L  HSEKLA+A+GLI   ++G  IRI KNLR C DCH F K++S +
Sbjct: 488 FVLQDVEEEVKKEMLYTHSEKLAIAFGLIAIPNKGDPIRISKNLRVCGDCHTFCKMVSDV 547

Query: 550 YQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            +R IIVRD  RFHHF  G CSC DYW
Sbjct: 548 MKRSIIVRDANRFHHFNEGACSCGDYW 574



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 4/283 (1%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           +Q+H      G  ++  + N L+H Y     +  A  LFD MP RD  +W+ ++ G    
Sbjct: 20  RQVHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKL 79

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
                    F  +L   +  ++ T+  V+RAC D   + MGR +H +V  K  +     V
Sbjct: 80  GDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVL-KYGLVLDHFV 138

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
              L+DMYAK   IE A              WT MI   A +    E++ LF  +     
Sbjct: 139 CATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYD-AYESLVLFDRLREEGF 197

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
             D+  M  V++AC     +  A  V ++     G+   +     ++D+ A+ GC+  A 
Sbjct: 198 VSDKVAMVTVVNACAKLGAMHRARFV-NEYICGNGLSLDVILGTAMIDMYAKCGCVDSAR 256

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
           +  + M  K + + W  +I A   H   + A  L    L  G+
Sbjct: 257 EVFDRMKEK-NVISWSAMIAAYGYHGKGKEALDLFHMMLSCGI 298


>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:28566228-28568873 | 20130731
          Length = 808

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/571 (35%), Positives = 322/571 (56%), Gaps = 24/571 (4%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSYYYNTM 66
           Q+H  I+K G  +N        ++  +AL    +  GDL  A+ +L +    +   +N++
Sbjct: 257 QVHGFIVKSGFGSN--------VYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSL 308

Query: 67  LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAP-DNFTFPFVLKCCARLKLARQGKQLH 125
           +  +          H L      L +  HG     D++TFP VL CC    +    K +H
Sbjct: 309 MVGFVR--------HGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVH 358

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
           G I K GF +   + NAL+ MY+  GD+  A  +F++M ++DV+SWTSL+ G   ++   
Sbjct: 359 GLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHE 418

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
           E++++F  M   GV  +   V S+L ACA+   L  G++VH +   K  +    +V  +L
Sbjct: 419 ESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVH-LDFIKSGLRWSQSVYNSL 477

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           + MYAK GC++ A              WTA+I G A +G  + ++  +  M +   +PD 
Sbjct: 478 VAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDF 537

Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
            T   +L AC +A LV E    F  M K YGI+P  +H+ C++DL  R+G L EA+  ++
Sbjct: 538 ITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLD 597

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
            M +KPDA +W++L+ AC+VHE+ E AER      E+   ++  Y++ SN+Y++  KW++
Sbjct: 598 QMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWND 657

Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
            A++R+LM  KG++K PG S +E++  ++ F+  D  HP    I+ K+DE++ ++K+ GY
Sbjct: 658 VAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGY 717

Query: 486 NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKL 545
            P +S  L ++D E K   L +HSEKLA+A+GL+     + IRI KNLR C DCH  MK 
Sbjct: 718 VPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKY 777

Query: 546 ISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           IS+++ R II+RD   FHHF+ G+CSC DYW
Sbjct: 778 ISRVFTRHIILRDSNCFHHFREGECSCGDYW 808



 Score =  166 bits (419), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 169/322 (52%), Gaps = 12/322 (3%)

Query: 59  NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           N   +  M+  Y+ + D    + A+  F +M      GV   + +TFP +L  C+ +   
Sbjct: 200 NHVLWTAMVTGYAQNGDG---YKAVEFFRYM---HAQGVEC-NQYTFPTILTACSSVLAR 252

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
             G+Q+HGFI K GFGS+ Y+ +AL+ MY+  GDL  A+ + + M D DVVSW SL+ G 
Sbjct: 253 CFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGF 312

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
           V H    EA+ LF  M    ++++D T  SVL  C   G+++  + VHG++  K   E  
Sbjct: 313 VRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLII-KTGFENY 369

Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
             VS AL+DMYAK+G ++ A              WT++++G A +   +E++ +F +M  
Sbjct: 370 KLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRV 429

Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
             V PD+  + ++LSAC    L+     V  D  K  G+  +   +  +V + A+ GCL 
Sbjct: 430 TGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS-GLRWSQSVYNSLVAMYAKCGCLD 488

Query: 359 EAEDFMNAMPMKPDAVLWRTLI 380
           +A+    +M +K D + W  +I
Sbjct: 489 DADAIFVSMQVK-DVITWTAII 509



 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 177/406 (43%), Gaps = 40/406 (9%)

Query: 39  LSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF------------ 86
           LS SG +N AR L    P  + Y +NTM+ +Y    +      A  LF            
Sbjct: 46  LSKSGQVNDARKLFDKMPQKDEYSWNTMISSYV---NVGRLVEARELFDGCSCKSSITWS 102

Query: 87  --------------IFMLRRPT--HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
                          F L R     G  A   FT   VL+ C+ L L + G+ +HGF+ K
Sbjct: 103 SIISGYCKFGCKVEAFDLFRSMRLEGWKA-SQFTLGSVLRVCSSLGLIQTGEMIHGFVVK 161

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP-DR-DVVSWTSLIDGLVDHDRPVEAI 188
            GF  + +++  L+ MY+    +  A  LF  +  DR + V WT+++ G   +    +A+
Sbjct: 162 NGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAV 221

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
           E F  M   GVE N  T  ++L AC+   A   G +VHG +  K        V +AL+DM
Sbjct: 222 EFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV-KSGFGSNVYVQSALVDM 280

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK G +++A              W +++ G   HGL +EA+ LF  M   N+K D+ T 
Sbjct: 281 YAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTF 340

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
            +VL+ C    +  ++      +  + G E        +VD+ A+ G +  A      M 
Sbjct: 341 PSVLNCCVVGSINPKS---VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM- 396

Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
           ++ D + W +L+     +   E + ++       GV+    +I+AS
Sbjct: 397 LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPD-QFIVAS 441



 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 138/309 (44%), Gaps = 14/309 (4%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D Y  N +I  Y   G L  ARELFD    +  ++W+S+I G       VEA +LF  M 
Sbjct: 66  DEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMR 125

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
             G + +  T+ SVLR C+  G +  G  +HG V  K   E    V T L+DMYAK  C+
Sbjct: 126 LEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVV-KNGFEGNVFVVTGLVDMYAKCKCV 184

Query: 256 ESAXXXXXXXX--XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
             A                WTAM++G A +G   +A++ F  M    V+ ++ T   +L+
Sbjct: 185 SEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILT 244

Query: 314 ACRN--ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
           AC +  A    E    F  +K  +G    +Q    +VD+ A+ G LK A++ +  M    
Sbjct: 245 ACSSVLARCFGEQVHGFI-VKSGFGSNVYVQ--SALVDMYAKCGDLKNAKNMLETME-DD 300

Query: 372 DAVLWRTLIWACKVHEDTERAERLMK--QHLEMGVDDSGSYILASNVYASVGKWSNKAEV 429
           D V W +L+     H   E A RL K      M +DD   Y   S +   V    N   V
Sbjct: 301 DVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDD---YTFPSVLNCCVVGSINPKSV 357

Query: 430 RELMNKKGL 438
             L+ K G 
Sbjct: 358 HGLIIKTGF 366


>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:11695650-11697815 | 20130731
          Length = 446

 Score =  374 bits (960), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/447 (42%), Positives = 279/447 (62%), Gaps = 2/447 (0%)

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           MG   D  + N+LI+MY   G++  A ++F+ M ++ V SW+++I      +   E + L
Sbjct: 1   MGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLML 60

Query: 191 FGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
            G+M   G   V ++T+V+VL AC   G+  +G+ +HGI+  +   E    V T+LIDMY
Sbjct: 61  LGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILL-RNISELNVVVKTSLIDMY 119

Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
            KSGC+E                +T MISGLA HG  KEA+ +F EM    + PD+    
Sbjct: 120 VKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYV 179

Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
            V SAC +A LV E    F  M+  + IEPT+QH+GC+VDLL R G LKEA + + +M +
Sbjct: 180 GVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSI 239

Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEV 429
           KP+ V+WR+L+ ACKVH + E  +   +    +  ++SG Y++ +N+YA   KW + A++
Sbjct: 240 KPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKI 299

Query: 430 RELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKL 489
           R  + ++ L++ PG S IE    +++FV  D + P+ + I+  + +M  +LK EGY P  
Sbjct: 300 RTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDT 359

Query: 490 SEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKI 549
           S+VLL++DDEEK  +L  HS+KLA+A+GLI TS+GS +RI +NLR C DCH + K IS I
Sbjct: 360 SQVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMI 419

Query: 550 YQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           Y+R+I VRDR+RFHHFKNG CSCKDYW
Sbjct: 420 YEREITVRDRLRFHHFKNGSCSCKDYW 446



 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 34/231 (14%)

Query: 86  FIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIH 145
            + + +  + G    +  T   VL  C  L     GK +HG + +     +  +  +LI 
Sbjct: 58  LMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLID 117

Query: 146 MYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDAT 205
           MY   G L     +F  M +++  S+T +I GL  H R  EA+++F  M+E G+  +D  
Sbjct: 118 MYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVV 177

Query: 206 VVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX 265
            V V  AC+ +G +  G +    ++ + +IE         +  Y   GC           
Sbjct: 178 YVGVFSACSHAGLVEEGLQCFKSMQFEHKIE-------PTVQHY---GC----------- 216

Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR 316
                     M+  L   G+ KEA +L   M   ++KP++    ++LSAC+
Sbjct: 217 ----------MVDLLGRFGMLKEAYELIKSM---SIKPNDVIWRSLLSACK 254


>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:31582853-31578503 | 20130731
          Length = 1126

 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/470 (40%), Positives = 290/470 (61%), Gaps = 3/470 (0%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           +L  C+ LK  +  K++HG++ K G  +D  I NA++++Y     +  AR +F+ +  +D
Sbjct: 459 ILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKD 517

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
           +VSWTS+I   V +   +EA+ELF  ++E  +E +  T+VSVL A A   +L  G+++HG
Sbjct: 518 IVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHG 577

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
            +  +K    +  ++ +L+DMYA+ G +E+A              WT+MI+    HG  K
Sbjct: 578 FLI-RKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGK 636

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
           +AIDLF +M   NV PD  T  A+L AC ++ LV E    F  MK  Y +EP  +H+ C+
Sbjct: 637 DAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACL 696

Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
           VDLLAR+  L+EA  F+  MP++P A +W  L+ AC++H + +  E   K+ L++  ++S
Sbjct: 697 VDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENS 756

Query: 408 GSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEAD 467
           G+Y+L SN +A+ G+W++  EVR +M    L K PG S IEV+  +H F+  D +HP+ +
Sbjct: 757 GNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCN 816

Query: 468 NIFVKLDEMVDKLK-KEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSK 526
           NI++KL +    LK K GY  +   V  ++ +EEK   L  HSE+LAL YGL+ TS+G+ 
Sbjct: 817 NIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTC 876

Query: 527 IRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           +RI KNLR C+DCH F K+ S+I QR ++VRD  RFHHF+ G CSC D+W
Sbjct: 877 LRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  160 bits (405), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 161/320 (50%), Gaps = 11/320 (3%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D FTFP VLK C   K  R G ++HG   K G+G   ++ NALI MY+  GDLG AR LF
Sbjct: 147 DAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLF 206

Query: 161 DR--MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           D   M   D VSW S+I   V     +EA+ LF RM E GVE N  T VS L+AC     
Sbjct: 207 DSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTF 266

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           + +GR +H ++ +         VS ALI MYA  G +E A              W  ++S
Sbjct: 267 IKIGRGIHAVILKSNHFT-DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLS 325

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGI 337
           G+  + +  +AI+ F +M+    KPD+ ++  +++A  R+A+L+  A M       ++GI
Sbjct: 326 GMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLL--AGMEVHAYAIKHGI 383

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
           +  +     ++D+  +  C+K        MP K D + W T+I     +E    A  L++
Sbjct: 384 DSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEK-DLISWTTIIAGYAQNECHLDALNLLR 442

Query: 398 --QHLEMGVDDS--GSYILA 413
             Q  +M VD    GS +LA
Sbjct: 443 KVQLEKMDVDPMMIGSILLA 462



 Score =  109 bits (273), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 128/304 (42%), Gaps = 36/304 (11%)

Query: 98  PAPDNFTFPF------VLKCCARLKLARQGKQLHG-FITKMGFGSDCYIMNALIHMYSVF 150
           P P    FP        L+ CA  K   QG+QLH  F+    +    ++    +HMY   
Sbjct: 36  PLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKC 95

Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
           G    A ++FD+M +R + +W ++I   V   R VEAIEL+  M   GV ++  T   VL
Sbjct: 96  GSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVL 155

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCN------VSTALIDMYAKSGCIESAXXXXXX 264
           +AC       +G ++HG+         KC       V  ALI MYAK G +  A      
Sbjct: 156 KACGAFKERRLGCEIHGVA-------VKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDS 208

Query: 265 XXXXXX--XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
                     W ++IS     G   EA+ LF  M+   V+ +  T  + L AC     ++
Sbjct: 209 GLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIK 268

Query: 323 EAYMVFSDMKKRYGIEPTIQHF------GCVVDLLARAGCLKEAEDFMNAMPMKPDAVLW 376
               + + + K         HF        ++ + A  G +++AE    +M  K D V W
Sbjct: 269 IGRGIHAVILKS-------NHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFK-DCVSW 320

Query: 377 RTLI 380
            TL+
Sbjct: 321 NTLL 324



 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 186/413 (45%), Gaps = 28/413 (6%)

Query: 37  AALSPSGDLNYARLLLTSN--PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPT 94
           A  +  GDL  AR+L  S      +   +N+++ A+    +      ALSLF    RR  
Sbjct: 191 AMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES---LEALSLF----RRMQ 243

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
                 + +TF   L+ C      + G+ +H  I K    +D Y+ NALI MY+  G + 
Sbjct: 244 EVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQME 303

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            A  +F  M  +D VSW +L+ G+V +D   +AI  F  M ++G + +  +V++++ A  
Sbjct: 304 DAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASG 363

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
            S  L  G +VH     K  I+   ++  +LIDMY K  C++                WT
Sbjct: 364 RSANLLAGMEVHAYAI-KHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWT 422

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC---RNADLVREAYMVFSDM 331
            +I+G A +    +A++L  +++   +  D   + ++L AC   ++  L++E   +   +
Sbjct: 423 TIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKE---IHGYV 479

Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH----- 386
            K    +  IQ+   +V++      +  A     ++  K D V W ++I  C VH     
Sbjct: 480 LKGGLADILIQN--AIVNVYGELALVDYARHVFESINSK-DIVSWTSMITCC-VHNGLAI 535

Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
           E  E    L++ ++E  +    S + A+   +S+ K     E+   + +KG  
Sbjct: 536 EALELFNSLIETNIEPDLITLVSVLYAAAALSSLKK---GKEIHGFLIRKGFF 585



 Score = 93.6 bits (231), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 90/159 (56%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD  T   VL   A L   ++GK++HGF+ + GF  +  I N+L+ MY+  G +  AR +
Sbjct: 551 PDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNI 610

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+ +  RD++ WTS+I+    H    +AI+LF +M +  V  +  T +++L AC+ SG +
Sbjct: 611 FNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLV 670

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
             G++   I+K + ++E        L+D+ A+S  +E A
Sbjct: 671 VEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEA 709


>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:50134416-50129873 | 20130731
          Length = 860

 Score =  369 bits (948), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/513 (38%), Positives = 293/513 (57%), Gaps = 8/513 (1%)

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N ++  YS   D      A+SLF F L    H     +  T   VLK  A L+  +  KQ
Sbjct: 356 NALISGYSQCGDDEQ---AISLF-FELH---HENIDFNQTTLSTVLKSVASLQQIKVCKQ 408

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +H    K G  SD Y++N+L+  Y     +  A ++F+     D+V++TS+I     H  
Sbjct: 409 IHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGD 468

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             EA++L+ +M  A ++ +     S+L ACA+  A   G+++H +   K         S 
Sbjct: 469 AEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLH-VHAIKFGFMSDIFASN 527

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           +L++MYAK G IE A              W+AMI GLA HG  KEA+ +F +M    V P
Sbjct: 528 SLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSP 587

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           +  T+ +VL AC +A LV E    F  M++++GI+PT +H  C++DLL R+G L EA + 
Sbjct: 588 NHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVEL 647

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
           +N++P + D  +W  L+ A ++H++ E  E+  ++   +  D SG+ +L +N+YAS G W
Sbjct: 648 VNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMW 707

Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
            N A VR++M    + K PG S IEV   +H F++GD NH  +D IF KLDE+ + L K 
Sbjct: 708 ENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFIVGDRNHSRSDEIFAKLDELSELLSKA 767

Query: 484 GYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFM 543
           GY+P +   +  ++  EK   L HHSEKLA+A+GLI T  G+ IR+ KNLR C DCH F+
Sbjct: 768 GYSPIIETDIHNVERSEKEKLLYHHSEKLAVAFGLIVTPPGAPIRVKKNLRVCVDCHTFL 827

Query: 544 KLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           KL+SK+  R I+VRD  RFHHFKNG CSC DYW
Sbjct: 828 KLVSKLVSRQIVVRDINRFHHFKNGSCSCGDYW 860



 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 176/390 (45%), Gaps = 18/390 (4%)

Query: 10  LQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYA-RLLLTSNPALNSYYYNTMLR 68
           ++LH  ++K G S + + RN   L TF   S S    YA  LL  S        ++ ++ 
Sbjct: 1   MELHTHLIKFGFSRHSSLRN--HLLTF--YSNSRRFGYACNLLDQSTEPRTVVSWSALIS 56

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
            Y  +      FH  +L  F     T GV + + FTFP VLK C+  K    GK++H   
Sbjct: 57  RYVQNG-----FHKEALLAFN-EMCTLGVKS-NEFTFPTVLKACSIKKDLNMGKKVHAMT 109

Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
              GF SD ++ N L+ MY+  G    +++LF  + +  VVSW +L    V  D   E +
Sbjct: 110 VVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETV 169

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
           +LF RM+E  V  N+ ++  +L ACA      +GR VHG++ +      + + + AL+DM
Sbjct: 170 DLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFS-ANALVDM 228

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK+G IE A              W A+I+G   H     A+ L  EM+     P+  T+
Sbjct: 229 YAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTL 288

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV--VDLLARAGCLKEAEDFMNA 366
           ++ L AC    L      + S   K   I+     F  V  +DL ++   + +A    + 
Sbjct: 289 SSALKACAAMGLKDLGRQIHSCSVK---IDSDSDLFVAVGLIDLYSKCEMMDDARRAYDL 345

Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           MP K   +    LI       D E+A  L 
Sbjct: 346 MPTKDHIIAGNALISGYSQCGDDEQAISLF 375



 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 10/285 (3%)

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD-RDVVSWTSLIDGLVDH 181
           +LH  + K GF     + N L+  YS     G A  L D+  + R VVSW++LI   V +
Sbjct: 2   ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
               EA+  F  M   GV+ N+ T  +VL+AC+    L+MG+KVH +       E    V
Sbjct: 62  GFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSG-FESDAFV 120

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
           S  L+ MYAK G    +              W A+ S         E +DLF  M    V
Sbjct: 121 SNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKV 180

Query: 302 KPDERTMTAVLSAC---RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
           +P+E +++ +L+AC   R+  + R  + +   MK  +G++    +   +VD+ A+AG ++
Sbjct: 181 RPNEYSLSIILNACAGLRDGGIGRTVHGLL--MKLGHGLDQFSAN--ALVDMYAKAGRIE 236

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +A D    M + PD V W  +I  C +HE  + A  L+ +  + G
Sbjct: 237 DAVDVFREM-IHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSG 280


>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:35446469-35444694 | 20130731
          Length = 591

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/570 (36%), Positives = 321/570 (56%), Gaps = 18/570 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q HA ++  G   + A        + AA    G + Y R L  S    +S+ +N++++A 
Sbjct: 36  QAHAHLIVSGRHRSRALLTKLLTLSSAA----GSIAYTRRLFLSVTDPDSFLFNSLIKAS 91

Query: 71  SLSSDPTHHFHALSL-FIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
           S         H  SL  IF  RR       P ++TF  V K CA L   + G  LH  + 
Sbjct: 92  SQ--------HGFSLDTIFFYRRMLSSPHKPSSYTFTSVFKACAHLSALKIGTILHSHVF 143

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
             GFGS+ ++  A++  Y+    L VAR++FD+MP R VV+W ++I G   +    EA+ 
Sbjct: 144 VSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMT 203

Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH-GIVKEKKRIECKCNVSTALIDM 248
           LF +M E GV  + AT VSV  AC+  G+L +G  V+  IV    R+     + T+LI+M
Sbjct: 204 LFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVI--LGTSLINM 261

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNVKPDERT 307
           +++ G +  A              WTAMISG   HG   EA++LF EM+    + P+  T
Sbjct: 262 FSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVT 321

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
             AVLSAC +A L+ E   VF+ M++ YG+ P ++H  C+VD+L +AG L EA  F+  +
Sbjct: 322 FVAVLSACAHAGLIHEGRQVFASMREEYGLVPGLEHHVCMVDMLGKAGLLTEAYQFIKEL 381

Query: 368 -PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNK 426
            P++    +W  ++ ACK+H++ +      +  + +  ++  +Y+L SN+YA  G+    
Sbjct: 382 CPVEHVPAVWTAMLGACKMHKNYDLGVEAAQHLISLEPENPSNYVLLSNMYALAGRMDRV 441

Query: 427 AEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYN 486
             VR +M ++G+ K  G S I+V+   + F MGD  HPE + I+  LD ++ + K+ GY 
Sbjct: 442 ESVRNVMIQRGIKKQAGYSSIDVNNKTYLFRMGDKAHPETNEIYQYLDGLIWRCKEAGYA 501

Query: 487 PKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLI 546
           P     + E+++EE+   L HHSEKLA+A+GL++TS G+ ++IVKNLR CEDCH  +K I
Sbjct: 502 PIPESAMHELEEEEREYALRHHSEKLAVAFGLMKTSHGTALKIVKNLRICEDCHSAIKFI 561

Query: 547 SKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           S +  R+II+RD++RFHHF+ G CSC DYW
Sbjct: 562 SVVTNREIIIRDKLRFHHFREGSCSCLDYW 591


>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:45554142-45556499 | 20130731
          Length = 785

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/535 (37%), Positives = 312/535 (58%), Gaps = 13/535 (2%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV-PAPDNF 103
           L YAR +  +    N   ++ M+  Y L    +    AL+L+  ML    +G+ P P   
Sbjct: 261 LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISD---ALALYDDML--CIYGLNPTPA-- 313

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           T   +L+ CA+L   ++GK+LH  + K G   D  + N+LI MY+  G +  A    D M
Sbjct: 314 TLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM 373

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
             +D VS++++I G V +    +A+ +F +M  +G+     T++++L AC+   AL  G 
Sbjct: 374 IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGT 433

Query: 224 KVHG--IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
             HG  +V+        CN   A+IDMY+K G I  +              W  MI G  
Sbjct: 434 CCHGYTVVRGFTNDTSICN---AIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYG 490

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
            HGLC EA+ LF E++   +KPD+ T+ AVLSAC ++ LV E    FS M + + I+P +
Sbjct: 491 IHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRM 550

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
            H+ C+VDLLARAG L EA  F+  MP  P+  +W  L+ AC+ H++ E  E++ K+   
Sbjct: 551 AHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQL 610

Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDY 461
           +G + +G+++L SN+Y+SVG+W + A +R +    G  K PG S +E+ G +H F+ G  
Sbjct: 611 LGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQ 670

Query: 462 NHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRT 521
           +HP++ +I  KL E++ ++KK GY    S VL ++++EEK   LL+HSEK+A+A+G++ T
Sbjct: 671 SHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNT 730

Query: 522 SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           S  S+I + KNLR C DCH  +K I+ + +R+I VRD  RFHHFK+G C+C+D+W
Sbjct: 731 SPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785



 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 172/365 (47%), Gaps = 15/365 (4%)

Query: 44  DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
           ++  AR +    P  +   +N M+R Y+ S        ++ L++ ML+    GV  P NF
Sbjct: 56  EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQ---SIYLYLHMLQL---GV-TPTNF 108

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           TFPF+LK C+ L+  + G+ +H     +G   D Y+  AL+HMY+  G L  A+ LF+ +
Sbjct: 109 TFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSI 168

Query: 164 P--DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
              DRD+V+W ++I     H    + I    +M +AGV  N +T+VS+L     + AL  
Sbjct: 169 SHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQ 228

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
           G+ +H         +    + TAL+DMYAK   +  A              W+AMI G  
Sbjct: 229 GKAIHAYYIRNFFFD-NVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYV 287

Query: 282 SHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGIEP 339
            H    +A+ L+ +M     + P   T+  +L AC    DL R   +    +K    ++ 
Sbjct: 288 LHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDT 347

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
           T+ +   ++ + A+ G +  A  F++ M  K D V +  +I  C  +   E+A  + +Q 
Sbjct: 348 TVGN--SLISMYAKCGIMDNAVGFLDEMIAK-DTVSYSAIISGCVQNGYAEKALLIFRQM 404

Query: 400 LEMGV 404
              G+
Sbjct: 405 QSSGI 409


>Medtr8g105720.1 | PPR containing plant-like protein | HC |
           chr8:44583313-44585824 | 20130731
          Length = 701

 Score =  367 bits (943), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/485 (39%), Positives = 290/485 (59%), Gaps = 6/485 (1%)

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
           +G   PD+FT   +L   A      +GK++HG+  + GF  D +I ++LI MY+    L 
Sbjct: 220 NGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLE 279

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            +   F  +P +D +SW S+I G V +      +  F RML+  V+    +  SV+ ACA
Sbjct: 280 CSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACA 339

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCN--VSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
              ALS+GR++HG +    R+    N  ++++L+DMYAK G I+ A              
Sbjct: 340 HLTALSLGRQLHGCIV---RLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVA 396

Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
           WTA+I G A HG   +A+ LF  M    V+P      AVL+AC +A LV E +  F+ M+
Sbjct: 397 WTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSME 456

Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM-PMKPDAVLWRTLIWACKVHEDTER 391
           + +GI P ++H+  V DLL RAG L+EA DF++ M  ++P   +W  L+ AC+ H+  E 
Sbjct: 457 RDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVEL 516

Query: 392 AERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDG 451
           AE+++ + L +  ++ G+Y+L SN+Y++  +W + A +R  M KKGL K P  S IEV  
Sbjct: 517 AEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGN 576

Query: 452 ALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEK 511
            +H F+ GD +HP  D I   LD ++++++KEGY    ++VL ++D+E K   L +HSE+
Sbjct: 577 QVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSER 636

Query: 512 LALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCS 571
           LA+AYG+I T+ G+ IR++KN+R C DCH  +K I+KI  R+I VRD  RFHHFKNG CS
Sbjct: 637 LAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCS 696

Query: 572 CKDYW 576
           C DYW
Sbjct: 697 CGDYW 701



 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 20/324 (6%)

Query: 97  VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVF------ 150
           VP P+   FP +LK    LK  +    LH    ++G  SD YI NALI+ Y+ F      
Sbjct: 106 VP-PNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKV 164

Query: 151 -------GDLGV--ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-VE 200
                  G+ G+   +++FD MP RDVVSW ++I G   +   VEA+++   M + G ++
Sbjct: 165 FDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLK 224

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
            +  T+ S+L   A+   ++ G+++HG    +   +    + ++LIDMYAK   +E +  
Sbjct: 225 PDSFTLSSILPIFAEHVDVNKGKEIHGYA-VRNGFDGDVFIGSSLIDMYAKCNRLECSLR 283

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W ++I+G   +G     +  F  M   NVKP   + ++V+ AC +   
Sbjct: 284 AFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTA 343

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           +     +   +  R G +        +VD+ A+ G +K A    + +  K D V W  +I
Sbjct: 344 LSLGRQLHGCI-VRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRID-KRDMVAWTAII 401

Query: 381 WACKVHEDTERAERLMKQHLEMGV 404
             C +H     A  L +  LE GV
Sbjct: 402 MGCAMHGHALDAVSLFENMLEDGV 425


>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:10600555-10597860 | 20130731
          Length = 839

 Score =  367 bits (942), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/505 (40%), Positives = 293/505 (58%), Gaps = 24/505 (4%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGS-DCYIM 140
           A+ +F  ML +   G  AP+ FTF  VLK CA L     G+Q+HG   K+G  + DC + 
Sbjct: 349 AMRMFSNMLLQ---GGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDC-VG 404

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV---------DHDRPVEAIELF 191
           N L+ +Y+  G +  AR+ FD + ++++VS T + D  V         D DR VE +   
Sbjct: 405 NGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYV--- 461

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
                 G  V+  T  S+L   A  G +  G ++H +V  K       +V+ ALI MY+K
Sbjct: 462 ------GSGVSSFTYASLLSGAACIGTIGKGEQIHAMVV-KIGFRTDLSVNNALISMYSK 514

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
            G  E+A              WT++I+G A HG   +A++LF  M    VKP++ T  AV
Sbjct: 515 CGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAV 574

Query: 312 LSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
           LSAC +  L+ EA+  F+ M+  +GI P ++H+ C+VDLL R+G L EA +F+N+MP   
Sbjct: 575 LSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDA 634

Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRE 431
           DA++WRT + +C+VH +T+  E   K  LE    D  +YIL SN+YA+ G+W + A +R+
Sbjct: 635 DALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRK 694

Query: 432 LMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSE 491
            M +K + K  GSS IEV+  +H+F +GD  HP+A  I+ KLDE+  K+K  GY P    
Sbjct: 695 NMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDF 754

Query: 492 VLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQ 551
           VL +++DE+K   L  HSEKLA+A+ LI T     IR+ KNLR C DCH  +K IS +  
Sbjct: 755 VLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSG 814

Query: 552 RDIIVRDRIRFHHFKNGDCSCKDYW 576
           R+I+VRD  RFHH K+G CSC DYW
Sbjct: 815 REIVVRDANRFHHMKDGTCSCNDYW 839



 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 171/388 (44%), Gaps = 60/388 (15%)

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           T   +LK C R K    GK LH  +T      D  ++N+LI +YS   D   A  +F  M
Sbjct: 54  TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113

Query: 164 PD--RDVVSWTSLIDGLVDHDRPVEAIELFGR-MLEAGVEVNDATVVSVLRACADSGALS 220
            +  RDVVS++S+I    ++   ++A+E+F + +L+ GV  N+    +V+RAC   G   
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGC----IESAXXXXXXXXXXXXXXWTAM 276
            G  + G V +    +    V   LIDM+ K GC    +ESA              WT M
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVK-GCSLADLESARKVFDKMREKNVVTWTLM 232

Query: 277 ISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNAD---------------- 319
           I+ LA +G   EAIDLFLEM  +    PD  T+T ++S C                    
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292

Query: 320 -------------------LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
                              LV+EA  VF  M+     E  +  +  +V+   R G   E 
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR-----EHNVMSWTALVNGYVRGGGGYER 347

Query: 361 ED---FMNAM---PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG---VDDSGSYI 411
           E    F N +    + P+   +  ++ AC    D +  E++  Q +++G   +D  G+ +
Sbjct: 348 EAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGL 407

Query: 412 LASNVYASVGKWSNKAEVRELMNKKGLI 439
           ++  VYA  G+  +  +  +++ +K L+
Sbjct: 408 VS--VYAKSGRMESARKCFDVLFEKNLV 433



 Score =  110 bits (275), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 33/259 (12%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYAR----LLLTSNPALNSYYYNTM 66
           Q+H Q +KLG S  D   N       +  + SG +  AR    +L   N    +   +T 
Sbjct: 387 QVHGQTIKLGLSAIDCVGN----GLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTN 442

Query: 67  LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHG 126
           ++ ++L+S+             + R   +      +FT+  +L   A +    +G+Q+H 
Sbjct: 443 VKDFNLNSEQD-----------LDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHA 491

Query: 127 FITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
            + K+GF +D  + NALI MYS  G+   A ++F+ M D +V++WTS+I+G   H    +
Sbjct: 492 MVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASK 551

Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG-------RKVHGIVKEKKRIECKC 239
           A+ELF  MLE GV+ ND T ++VL AC+  G +          R  HGIV   +   C  
Sbjct: 552 ALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYAC-- 609

Query: 240 NVSTALIDMYAKSGCIESA 258
                ++D+  +SG +  A
Sbjct: 610 -----MVDLLGRSGLLSEA 623



 Score =  106 bits (264), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 160/351 (45%), Gaps = 51/351 (14%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSP----SGDLNYARLL----LTSNPALNSYY 62
           QLH  I  L  ++ ++  N +KL T + L      + + +  +LL     TSN  L++  
Sbjct: 31  QLHKAITTLNLTDTESTHN-NKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLL 89

Query: 63  YNTMLRAYSLSSDPTHHF------------------------------HALSLFIFMLRR 92
            N+++  YS S+DP   F                               A+ +F  +L +
Sbjct: 90  LNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQ 149

Query: 93  PTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMG-FGSDCYIMNALIHMY---S 148
              GV  P+ + F  V++ C +    + G  L GF+ K G F S   +   LI M+    
Sbjct: 150 D--GV-YPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGC 206

Query: 149 VFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA-TVV 207
              DL  AR++FD+M +++VV+WT +I  L  +    EAI+LF  ML +   V D  T+ 
Sbjct: 207 SLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLT 266

Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
            ++  CA+   LS+G+++H  V     +   C V  +L+DMYAK G ++ A         
Sbjct: 267 GLISVCAEIQFLSLGKELHSWVIRSGLVLDLC-VGCSLVDMYAKCGLVQEARKVFDGMRE 325

Query: 268 XXXXXWTAMISGL--ASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSAC 315
                WTA+++G      G  +EA+ +F  M     V P+  T + VL AC
Sbjct: 326 HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKAC 376



 Score = 99.8 bits (247), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 24/363 (6%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           A+ LF+ ML    +    PD FT   ++  CA ++    GK+LH ++ + G   D  +  
Sbjct: 245 AIDLFLEMLVSSGY---VPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGC 301

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV----DHDRPVEAIELFGRM-LE 196
           +L+ MY+  G +  AR++FD M + +V+SWT+L++G V     ++R  EA+ +F  M L+
Sbjct: 302 SLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYER--EAMRMFSNMLLQ 359

Query: 197 AGVEVNDATVVSVLRACADSGALSMGRKVHG--IVKEKKRIECKCNVSTALIDMYAKSGC 254
            GV  N  T   VL+ACA       G +VHG  I      I+C   V   L+ +YAKSG 
Sbjct: 360 GGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDC---VGNGLVSVYAKSGR 416

Query: 255 IESAXXXXXXXXXXXXXXWTAM-ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
           +ESA               T +  + +    L  E  DL  E+E         T  ++LS
Sbjct: 417 MESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ-DLDREVEYVGSGVSSFTYASLLS 475

Query: 314 ACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDA 373
                  + +   + + M  + G    +     ++ + ++ G  + A    N M    + 
Sbjct: 476 GAACIGTIGKGEQIHA-MVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDME-DCNV 533

Query: 374 VLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVG----KWSNKAE 428
           + W ++I     H    +A  L    LE GV  +  +YI   +  + VG     W +   
Sbjct: 534 ITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTS 593

Query: 429 VRE 431
           +R+
Sbjct: 594 MRD 596


>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
           | 20130731
          Length = 596

 Score =  366 bits (939), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/576 (36%), Positives = 317/576 (55%), Gaps = 18/576 (3%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARL-LLTSNPALNSYYY 63
           ++ + LQLHA I+KLG      P     L  F + +    L Y+ L +   +P  ++  +
Sbjct: 35  SLPKGLQLHAHIIKLGLQT--IPLLSHHLINFYSKT---HLPYSSLQIFHDSPHKSATTW 89

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           ++++ +++ +  P     +L+ F  MLR+   GVP PD+  FP   K C  L      K 
Sbjct: 90  SSVISSFAQNDLP---LLSLNYFRLMLRQ---GVP-PDDHIFPSATKSCGILSSLPVAKM 142

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           LH F  K  +  D ++ +++I MY+  GD+  A  +FD MP R+VVSW+ LI G V    
Sbjct: 143 LHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGE 202

Query: 184 PVEAIELFGRML--EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
             E++ LF R L  E    VND T+ SVLR C  S  L MGR +HG+   K   +  C V
Sbjct: 203 DDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGL-SFKTSFDSSCFV 261

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN- 300
           +++LI +Y+K G +E A              W AM+   A H    +  +LF +M++   
Sbjct: 262 ASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGG 321

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
           +K +  T   VL AC +A LV +    F  MK  YGIEP  QH+  +VDLL RAG L +A
Sbjct: 322 MKANFITFLCVLYACSHAGLVEKGKYYFELMKD-YGIEPGTQHYSTMVDLLGRAGKLNDA 380

Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
              +  MPM+P   +W  L+  C++H +T+ A  +  +  E+G   SG +++ SN YA+ 
Sbjct: 381 VKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAA 440

Query: 421 GKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKL 480
           G+W   A+ R++M  +G+ K  G S +E    +H F  GD +H ++  I+ KLDE+ +++
Sbjct: 441 GRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEM 500

Query: 481 KKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCH 540
            K GY    S VL E+D EEK+  + +HSE+LA+A+G I    G  IR++KNLR C DCH
Sbjct: 501 DKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCH 560

Query: 541 EFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
             +K ISK   R IIVRD  RFH F++G C+C DYW
Sbjct: 561 TAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596


>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:54376407-54379381 | 20130731
          Length = 783

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/540 (36%), Positives = 294/540 (54%), Gaps = 14/540 (2%)

Query: 40  SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
           S  GD+N ARLL       +   YN M+  ++ +             +F   R +     
Sbjct: 255 SKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIV 314

Query: 100 ---PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
              P +  F  +   C+          +HGF  K G   +  +  A   +Y+   ++ +A
Sbjct: 315 GLIPLHSPFGHLHLACS----------IHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLA 364

Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
           R LFD  P++ VV+W ++I G   +     AI LF  M++     N  T+ ++L ACA  
Sbjct: 365 RHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQL 424

Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
           G+LS G+ VH ++K +  +E    VSTAL+DMYAK G I  A              W  M
Sbjct: 425 GSLSFGKWVHHLIKSEN-LEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTM 483

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           I G   HG   EA+ L+ EM      P   T  +VL AC +A LV E   +F +M  +Y 
Sbjct: 484 IFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYR 543

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           IEP I+H+ C+VD+L R+G L++A +F+  MP++P   +W TL+ AC +H+DT+ A    
Sbjct: 544 IEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLAS 603

Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
           ++  E+     G Y+L SN+Y+    +   A +R+++ K+ L K PG + IEV+G  H F
Sbjct: 604 ERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVF 663

Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAY 516
           V GD +H  A +I+ KL+++  K+++ GY  +    L ++++EEK   +  HSEKLA+A+
Sbjct: 664 VSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAF 723

Query: 517 GLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           GLI T  G++IRI+KNLR C DCH   K ISKI +R I+VRD  RFHHFK+G CSC DYW
Sbjct: 724 GLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 6/343 (1%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+ T   VL   A L+  + G  +     K+GFG   Y++  LI +YS  GD+  AR LF
Sbjct: 208 DSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLF 267

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
            R+   D++++ ++I G   +     +++LF  +L +G  V+ +T+V ++   +  G L 
Sbjct: 268 RRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLH 327

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
           +   +HG    K  I     VSTA   +Y K   I+ A              W AMISG 
Sbjct: 328 LACSIHGFCV-KSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGY 386

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
             +G  + AI LF EM      P+  T+T +LSAC     +     V   +K    +EP 
Sbjct: 387 TQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSE-NLEPN 445

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
           I     +VD+ A+ G + EA    ++M  K + V W T+I+   +H     A +L  + L
Sbjct: 446 IYVSTALVDMYAKCGNISEAWQLFDSMSEK-NTVTWNTMIFGYGLHGYGHEALKLYNEML 504

Query: 401 EMGVDDSGSYILASNVYA--SVGKWSNKAEVRELMNKKGLIKP 441
            +G + S    L S +YA    G      E+   M  K  I+P
Sbjct: 505 HLGYNPSAVTFL-SVLYACSHAGLVGEGEEIFHNMVNKYRIEP 546



 Score =  125 bits (315), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 153/297 (51%), Gaps = 18/297 (6%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAP--RNFSKLFTFAALSPSGDLNYARLLLTSNPALN 59
           + +T     Q HAQ +  G   + A   +   KLF F+A        +AR L  S P  +
Sbjct: 21  KASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSAT------RHARALFFSVPKPD 74

Query: 60  SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
            + +N ++R +SL+  P+    ++SL+   LRR T+   +PDNFT+ F +  C+  K   
Sbjct: 75  IFLFNVLVRGFSLNDSPSS---SISLYTH-LRRNTN--LSPDNFTYAFAVAACSNDK--- 125

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
               LH      G+GS+ ++ +AL+ +Y  F  +  AR++FD MP+RD V W ++I+GLV
Sbjct: 126 HLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLV 185

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
            +    ++I+LF  M+  GV V+ +TV +VL A A+   L +G  +  +  +     C  
Sbjct: 186 KNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCD- 244

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
            V T LI +Y+K G + +A              + AMISG  ++G  + ++ LF E+
Sbjct: 245 YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFREL 301


>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:38114703-38117150 | 20130731
          Length = 616

 Score =  363 bits (933), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/602 (36%), Positives = 320/602 (53%), Gaps = 46/602 (7%)

Query: 9   ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
           A +LHAQI+K G  N+  P  F K     A    G L  A  L  + P  +   + T+L 
Sbjct: 27  AKKLHAQIIKSGL-NHHHP--FPKTL-IDAYGKCGLLKDALKLFDALPQQDHVAWATVLS 82

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA--RQGKQLHG 126
           A +LS+ P H   ++SL I       H    PD+F F  ++K CA L     + GKQLH 
Sbjct: 83  ACNLSNLP-HKAFSISLPIL------HEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHA 135

Query: 127 FITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
                 F  D  + ++L+ MY+ F      R +FD + +   +SWT++I G     R +E
Sbjct: 136 RFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLE 195

Query: 187 AIELFG-------------------------------RMLEAGVEVNDATVV-SVLRACA 214
           A+ELF                                 M   GV + D  V+ SV+ ACA
Sbjct: 196 ALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACA 255

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
           +S    +G++VH +V       C   +S AL+DMYAK   + +A              WT
Sbjct: 256 NSAVRELGKQVHCVVITLGYESC-LFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWT 314

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
           ++I G A HGL +EA+ L+ +M    VKP+E T   ++ AC +  LV +   +F  M + 
Sbjct: 315 SIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVED 374

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
           +GI P++QH+ C++DL +R+G L EAE+ +  MP+KPD   W  L+ ACK H +T+ A R
Sbjct: 375 FGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVR 434

Query: 395 LMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
           +    L++  +D  SYIL SN+YA  G W N + VR+LM  K + K PG S +++     
Sbjct: 435 IADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQ 494

Query: 455 EFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLAL 514
            F  G+ + P  D I   + ++  ++++ GY P  S VLL++D +EK  QL  HSE+LAL
Sbjct: 495 VFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLAL 554

Query: 515 AYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKD 574
           AYGL++   G+ IRIVKNLR C DCH  +KLIS I  R+I VRD  R+HHFK+G CSC D
Sbjct: 555 AYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCND 614

Query: 575 YW 576
           +W
Sbjct: 615 FW 616


>Medtr8g086560.1 | PPR containing plant protein | HC |
           chr8:35911406-35914374 | 20130731
          Length = 908

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/538 (36%), Positives = 300/538 (55%), Gaps = 15/538 (2%)

Query: 40  SPSGDLNYARLLLTSNPALNSYYYNTMLRAY---SLSSDPTHHFHALSLFIFMLRRPTHG 96
           S  G+LN A  +           + +++ AY    L SD      A+ LF  M  +    
Sbjct: 342 SKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSD------AIGLFDEMQSKGVR- 394

Query: 97  VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
              PD +T   ++  CA      +G+ +H ++ K G GS+  + NALI+MY+  G +  A
Sbjct: 395 ---PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 451

Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
           R +F ++P +D+VSW ++I G   +  P EA+ELF  M +   + +D T+  VL ACA  
Sbjct: 452 RLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGL 510

Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
            AL  GR++HG +  +       +V+ AL+DMYAK G +  A              WT M
Sbjct: 511 AALDKGREIHGHILRRGYFS-DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 569

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           I+G   HG   EAI  F EM    ++PDE + +A+L+AC ++ L+ E +  F+ M+   G
Sbjct: 570 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECG 629

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           +EP ++H+ CVVDLLAR G L +A  F+ +MP+KPD  +W  L+  C++H D + AE++ 
Sbjct: 630 VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 689

Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
           +   E+  D++  Y++ +NVYA   KW    ++R+ M K+G  + PG S IEV G  + F
Sbjct: 690 EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIF 749

Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAY 516
           V G+  HP+A  I V L ++  +++ E Y+     VL+  DD EK      HSEK A+A+
Sbjct: 750 VAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAF 809

Query: 517 GLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKD 574
           G++    G  +R+ KN R C DCHE  K +SK  + +I++RD  RFHHFK+G CSC+D
Sbjct: 810 GILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867



 Score =  172 bits (435), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 198/379 (52%), Gaps = 14/379 (3%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           E  ++ +  ++H+ I+  G S ++A         F  ++  GDL   R +         +
Sbjct: 106 EKKSLEDGKRVHSVIISNGISVDEA---LGAKLVFMYVN-CGDLVQGRKIFDKIMNDKVF 161

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            +N ++  Y+      +   ++SLF  M +    G    + +TF  VLKC A L   ++ 
Sbjct: 162 LWNLLMSEYA---KIGNFRESVSLFKKMQKLGVVG----NCYTFTCVLKCFAALGKVKEC 214

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           K++HG++ K+GFGS+  ++N+LI  Y  FG +  A  LFD + + DVVSW S+I+G V +
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
                 +E+F +ML  GVEV+  T+VSVL ACA+ G LS+GR +HG    K     +   
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGF-GVKACFSEEVVF 333

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
           S  L+DMY+K G +  A              WT++I+     GL  +AI LF EM++  V
Sbjct: 334 SNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGV 393

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           +PD  T+T+++ AC  +  + +   V S + K  G+   +     ++++ A+ G ++EA 
Sbjct: 394 RPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEAR 452

Query: 362 DFMNAMPMKPDAVLWRTLI 380
              + +P+K D V W T+I
Sbjct: 453 LVFSKIPVK-DIVSWNTMI 470



 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 164/347 (47%), Gaps = 24/347 (6%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           +++ +   +H+ ++K G  +N  P   + +  +A     G +  ARL+ +  P  +   +
Sbjct: 411 SSLDKGRDVHSYVIKNGMGSN-LPVTNALINMYA---KCGSVEEARLVFSKIPVKDIVSW 466

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           NTM+  YS +  P     AL LF+ M ++       PD+ T   VL  CA L    +G++
Sbjct: 467 NTMIGGYSQNLLPN---EALELFLDMQKQFK-----PDDITMACVLPACAGLAALDKGRE 518

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +HG I + G+ SD ++  AL+ MY+  G L +A+ LFD +P +D++SWT +I G   H  
Sbjct: 519 IHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGF 578

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             EAI  F  M  AG+E ++++  ++L AC+ SG L+ G K    ++ +  +E K     
Sbjct: 579 GNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYA 638

Query: 244 ALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGLASH---GLCKEAIDLFLEMETC 299
            ++D+ A+ G +  A               W  ++SG   H    L ++  +   E+E  
Sbjct: 639 CVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE-- 696

Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
              PD      VL+   N     E +     ++KR       Q+ GC
Sbjct: 697 ---PDNTRYYVVLA---NVYAEAEKWEEVKKLRKRMQKRGFKQNPGC 737



 Score = 93.6 bits (231), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 1/210 (0%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           VL+ CA  K    GK++H  I   G   D  +   L+ MY   GDL   R++FD++ +  
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
           V  W  L+          E++ LF +M + GV  N  T   VL+  A  G +   ++VHG
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
            V  K        V  +LI  Y K G +ESA              W +MI+G   +G   
Sbjct: 220 YVL-KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 278

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRN 317
             +++F++M    V+ D  T+ +VL AC N
Sbjct: 279 NGLEIFIQMLILGVEVDLTTLVSVLVACAN 308



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 5/219 (2%)

Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
           AIEL  +      E+   +  SVL+ CA+  +L  G++VH ++     I     +   L+
Sbjct: 80  AIELLTK--SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNG-ISVDEALGAKLV 136

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
            MY   G +                 W  ++S  A  G  +E++ LF +M+   V  +  
Sbjct: 137 FMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY 196

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           T T VL        V+E   V   + K  G          ++    + G ++ A +  + 
Sbjct: 197 TFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 255

Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
           +  +PD V W ++I  C V+  +     +  Q L +GV+
Sbjct: 256 LS-EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 293


>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:46998568-47001126 | 20130731
          Length = 782

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/529 (37%), Positives = 292/529 (55%), Gaps = 38/529 (7%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           AL  F  M R  +     PD FT   VL  CA L+  + GKQ+H +I +        + N
Sbjct: 258 ALETFSDMFRSSS---LKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGN 314

Query: 142 ALIHMYSV---------------------------------FGDLGVARELFDRMPDRDV 168
           ALI MY+                                   GD+  ARE+FD +  RDV
Sbjct: 315 ALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDV 374

Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGI 228
           V+WT++I G   +    +A+ELF  M+  G   N  T+ +VL   +   +L  G+++H I
Sbjct: 375 VAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAI 434

Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGLASHGLCK 287
               K +    +V  ALI MY+KSGCI+ A               WT+MI  LA HGL  
Sbjct: 435 AIRLKEVS-SVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGN 493

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
           EAI+LF +M   N+KPD  T   VLSAC +  LV +    F+ MK  + IEPT  H+ C+
Sbjct: 494 EAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACM 553

Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
           +DL  RAG ++EA +F+  MP++PD + W +L+ AC+VH++ + A+   ++ L +  ++S
Sbjct: 554 IDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRVHKNVDLAKVAAEKLLLIDPNNS 613

Query: 408 GSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEAD 467
           G+Y   +N +++ G+W   A+VR+LM  + + K  G S +++   +H F + D  HP+ D
Sbjct: 614 GAYSALANTHSACGEWEEAAKVRKLMRDREVKKEQGFSWVQIQNKVHIFGVEDALHPQRD 673

Query: 468 NIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKI 527
            I+  + ++  ++KK G+NP    VL ++D E K   L HHSEKLA+A+ LI +   + +
Sbjct: 674 AIYRMISKIWKEIKKIGFNPDTDSVLHDLDQEVKEQILSHHSEKLAIAFALINSPGYTTL 733

Query: 528 RIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           RI+KNLR C DCH  +K IS +  R+IIVRD  RFHHFK+G CSC+DYW
Sbjct: 734 RIMKNLRVCNDCHSAIKYISMLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 205/501 (40%), Gaps = 90/501 (17%)

Query: 22  SNNDAPRNFSKL-----FTFAALSPS----GDLNYARLLLTSNPALNSYYYNTMLRAYSL 72
           S NDA R FS++     F++  L  S    G++  AR L    P  +S  + TM+  Y+ 
Sbjct: 60  SFNDAHRLFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQ 119

Query: 73  SSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMG 132
                   H     I      + G+  P  FTF  VL  C        GK++H F+ K+G
Sbjct: 120 MGRFNTAIHTFQQMI------SDGI-LPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLG 172

Query: 133 FGSDCYIMNALIHMY----------SVF---------------------GDLGVARELFD 161
                 + N+L++MY          +VF                     G   VA  LFD
Sbjct: 173 LSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFD 232

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALS 220
           +M DRD++SW S+I G        +A+E F  M   + ++ +  T+ SVL ACA+  +L 
Sbjct: 233 QMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLK 292

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX----------- 269
           +G+++H  +  +  I+    V  ALI MYAKSG +E A                      
Sbjct: 293 LGKQIHAYI-VRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLN 351

Query: 270 ----------------------XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
                                    WTAMI G A + L K+A++LF  M +   +P+  T
Sbjct: 352 GYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYT 411

Query: 308 MTAVL---SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
           + AVL   S+  + D  ++ + +   +K+   +         ++ + +++GC+K+A    
Sbjct: 412 LAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVG----NALITMYSKSGCIKDARKVF 467

Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKW 423
           N +  + D + W ++I A   H     A  L +  L+  +  D  +Y+   +    VG  
Sbjct: 468 NQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLV 527

Query: 424 SNKAEVRELMNKKGLIKPPGS 444
                   LM     I+P  S
Sbjct: 528 EQGKRYFNLMKNVHHIEPTHS 548



 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 49/323 (15%)

Query: 7   SEALQLHAQILKL-GTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           S A+++   I++L GTSN +     S L  +  +   GD+N AR +  S    +   +  
Sbjct: 323 SGAVEVARTIVELRGTSNINVIAFTSLLNGYVKI---GDVNPAREIFDSLKCRDVVAWTA 379

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           M+  Y+ +S       AL LF  M+       P P+++T   VL   + L     GKQLH
Sbjct: 380 MIVGYAQNSLLKD---ALELFRLMISEG----PRPNSYTLAAVLSVFSSLASLDHGKQLH 432

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM-PDRDVVSWTSLIDGLVDHDRP 184
               ++   S   + NALI MYS  G +  AR++F+++  +RD ++WTS+I  L  H   
Sbjct: 433 AIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLG 492

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
            EAIELF  ML+  ++ +  T V VL AC   G +  G++   ++K    IE   +    
Sbjct: 493 NEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYAC 552

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           +ID++ ++G IE A                                  +  ++T  ++PD
Sbjct: 553 MIDLFGRAGLIEEA----------------------------------YNFIKTMPIEPD 578

Query: 305 ERTMTAVLSACR---NADLVREA 324
                ++LSACR   N DL + A
Sbjct: 579 GIAWGSLLSACRVHKNVDLAKVA 601



 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 69/301 (22%)

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS---------- 148
            P + TF ++L+   + +    G+ +H  I K G     ++MN L++ YS          
Sbjct: 7   TPKSDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHR 66

Query: 149 VF---------------------GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           +F                     G++  AR LFD +P+ D VSWT++I G     R   A
Sbjct: 67  LFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTA 126

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           I  F +M+  G+     T  +VL +C  +G+L +G+KVH  V  K  +     V+ +L++
Sbjct: 127 IHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFV-VKLGLSGVVPVANSLLN 185

Query: 248 MYAK-------------------------------SGCIESAXXXXXXXXXXXXXXWTAM 276
           MY K                               SG  + A              W ++
Sbjct: 186 MYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSI 245

Query: 277 ISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVR-----EAYMVFSD 330
           I+G    G   +A++ F +M  + ++KPD+ T+ +VLSAC N + ++      AY+V +D
Sbjct: 246 IAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRAD 305

Query: 331 M 331
           +
Sbjct: 306 I 306


>Medtr4g086490.1 | PPR containing plant protein | HC |
            chr4:33903624-33910415 | 20130731
          Length = 1183

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/475 (38%), Positives = 277/475 (58%), Gaps = 2/475 (0%)

Query: 100  PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
            PD +T   ++  CA      +G+ +H ++ K G GS+  + NALI+MY+  G +  AR +
Sbjct: 670  PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 729

Query: 160  FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
            F ++P +D+VSW ++I G   +  P EA+ELF  M +   + +D T+  VL ACA   AL
Sbjct: 730  FSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAAL 788

Query: 220  SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
              GR++HG +  +       +V+ AL+DMYAK G +  A              WT MI+G
Sbjct: 789  DKGREIHGHILRRGYFS-DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 847

Query: 280  LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
               HG   EAI  F EM    ++PDE + + +L+AC ++ L+ E +  F+ M+   G+EP
Sbjct: 848  YGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEP 907

Query: 340  TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
             ++H+ CVVDLLAR G L +A  F+ +MP+KPD  +W  L+  C++H D + AE++ +  
Sbjct: 908  KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI 967

Query: 400  LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
             E+  D++  Y++ +NVYA   KW    ++R+ M K+G  + PG S IEV G  + FV G
Sbjct: 968  FELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 1027

Query: 460  DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
            +  HP+A  I V L ++  +++ E Y      VL+  DD EK      HSEK A+A+G++
Sbjct: 1028 NSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGIL 1087

Query: 520  RTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKD 574
                G  +R+ KN R C DCHE  K +SK  +R+I++RD  RFHHFK+G CSC+D
Sbjct: 1088 NLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142



 Score =  166 bits (421), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 196/379 (51%), Gaps = 14/379 (3%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           E  ++ +  ++H+ I+  G S ++A         F  ++  GDL   R +         +
Sbjct: 381 EKKSLEDGKRVHSVIISNGISIDEA---LGAKLVFMYVN-CGDLVQGRKIFDKIMNDKVF 436

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            +N ++  Y+   +      ++SLF  M +    G    + +TF  VLKC A L   ++ 
Sbjct: 437 LWNLLMSEYAKIGN---FRESVSLFKKMQKLGVVG----NCYTFTCVLKCFAALGKVKEC 489

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           K++HG++ K+GFGS+  ++N+LI  Y  FG +  A  LFD + + DVVSW S+I+G V +
Sbjct: 490 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 549

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
                 +E+F +ML  GVEV+  T+VSVL A A+ G LS+GR +HG    K     +   
Sbjct: 550 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGF-GVKACFSEEVVF 608

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
           S  L+DMY+K G +  A              WT+ I+     GL  +AI LF EM++  V
Sbjct: 609 SNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGV 668

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           +PD  T+T+++ AC  +  + +   V S + K  G+   +     ++++ A+ G ++EA 
Sbjct: 669 RPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEAR 727

Query: 362 DFMNAMPMKPDAVLWRTLI 380
              + +P+K D V W T+I
Sbjct: 728 LVFSKIPVK-DIVSWNTMI 745



 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 164/347 (47%), Gaps = 24/347 (6%)

Query: 4    TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
            +++ +   +H+ ++K G  +N  P   + +  +A     G +  ARL+ +  P  +   +
Sbjct: 686  SSLDKGRDVHSYVIKNGMGSN-LPVTNALINMYAK---CGSVEEARLVFSKIPVKDIVSW 741

Query: 64   NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
            NTM+  YS +S P     AL LF+ M ++       PD+ T   VL  CA L    +G++
Sbjct: 742  NTMIGGYSQNSLPN---EALELFLDMQKQ-----FKPDDITMACVLPACAGLAALDKGRE 793

Query: 124  LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
            +HG I + G+ SD ++  AL+ MY+  G L +A+ LFD +P +D++SWT +I G   H  
Sbjct: 794  IHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGF 853

Query: 184  PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
              EAI  F  M  AG+E ++++   +L AC+ SG L+ G K    ++ +  +E K     
Sbjct: 854  GNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYA 913

Query: 244  ALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLASH---GLCKEAIDLFLEMETC 299
             ++D+ A+ G +  A               W  ++SG   H    L ++  +   E+E  
Sbjct: 914  CVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE-- 971

Query: 300  NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
               PD      VL+   N     E +     ++KR       Q+ GC
Sbjct: 972  ---PDNTRYYVVLA---NVYAEAEKWEEVKKLRKRMQKRGFKQNPGC 1012



 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 1/210 (0%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           VL+ CA  K    GK++H  I   G   D  +   L+ MY   GDL   R++FD++ +  
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
           V  W  L+          E++ LF +M + GV  N  T   VL+  A  G +   ++VHG
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
            V  K        V  +LI  Y K G +ESA              W +MI+G   +G   
Sbjct: 495 YVL-KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 553

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRN 317
             +++F++M    V+ D  T+ +VL A  N
Sbjct: 554 NGLEIFIQMLILGVEVDLTTLVSVLVAWAN 583



 Score = 53.5 bits (127), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 6/239 (2%)

Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
           AIEL  +      E+   +  SVL+ CA+  +L  G++VH ++     I     +   L+
Sbjct: 355 AIELLTK--SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNG-ISIDEALGAKLV 411

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
            MY   G +                 W  ++S  A  G  +E++ LF +M+   V  +  
Sbjct: 412 FMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY 471

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           T T VL        V+E   V   + K  G          ++    + G ++ A +  + 
Sbjct: 472 TFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 530

Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWS 424
           +  +PD V W ++I  C V+  +     +  Q L +GV+ D  + +     +A++G  S
Sbjct: 531 LS-EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLS 588


>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:453448-455881 | 20130731
          Length = 668

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/555 (36%), Positives = 311/555 (56%), Gaps = 12/555 (2%)

Query: 24  NDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHAL 83
           ND     S LF +A     G L  AR +       +   + +M+  YS     +    AL
Sbjct: 124 NDLVIKNSILFMYAK---CGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTAL 180

Query: 84  SLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNAL 143
            LF+ M+R        P+ F    ++KCC  L     GKQ+HG   K GF  + ++ ++L
Sbjct: 181 VLFLEMVRDGLR----PNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSL 236

Query: 144 IHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVND 203
           + MY+  G+L  +R +FD +  ++ VSW +LI G        EA+ LF +M   G    +
Sbjct: 237 VDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATE 296

Query: 204 ATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
            T  ++L + + +G+L  G+ +H  ++K  K++     V   L+ MYAKSG I  A    
Sbjct: 297 FTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGY--VGNTLLHMYAKSGNICDAKKVF 354

Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNVKPDERTMTAVLSACRNADLV 321
                       +M+ G A HGL KEA++LF EM     ++P++ T  +VL+AC +A L+
Sbjct: 355 DRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLL 414

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
            E    F  MKK YG+EP + H+  VVDL  RAG L +A+ F+  MP++P+A +W  L+ 
Sbjct: 415 DEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLG 473

Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
           A K+H++TE      ++ LE+     G++ L SN+YAS G+W + A+VR+ M   GL K 
Sbjct: 474 ASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKE 533

Query: 442 PGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEK 501
           P  S +E++ ++H F   D +HP+ + ++   + +  K+K+ GY P  S V + +D +EK
Sbjct: 534 PACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEK 593

Query: 502 ATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIR 561
              L +HSEKLALA+ L+ T  GS IRI+KN+R C DCH  +K +S + +R+IIVRD  R
Sbjct: 594 ELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNR 653

Query: 562 FHHFKNGDCSCKDYW 576
           FHHF++G CSC+DYW
Sbjct: 654 FHHFRDGSCSCRDYW 668



 Score =  116 bits (290), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 130/273 (47%), Gaps = 11/273 (4%)

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           +T L   SL+ + T   H L L         +G   PD   +  +LK C  L   +QGK 
Sbjct: 60  DTNLLRPSLNPNSTTGLHVLDLI-------NNGSLEPDRTIYNKLLKRCTMLGKLKQGKL 112

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH-- 181
           +H  +    F +D  I N+++ MY+  G L +AR++FD M  +DVV+WTS+I G      
Sbjct: 113 VHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGY 172

Query: 182 -DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
                 A+ LF  M+  G+  N+  + S+++ C   G+   G+++HG    K   +    
Sbjct: 173 ASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCC-WKYGFQENVF 231

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           V ++L+DMYA+ G +  +              W A+ISG A  G  +EA+ LF++M+   
Sbjct: 232 VGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREG 291

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
               E T +A+L +      + +   + + M K
Sbjct: 292 FGATEFTYSALLCSSSTTGSLEQGKWLHAHMMK 324


>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:41303481-41301142 | 20130731
          Length = 634

 Score =  361 bits (926), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 210/564 (37%), Positives = 304/564 (53%), Gaps = 45/564 (7%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHF---HALSLFIFMLRRPTHGVPA 99
           G+   AR L    P  N+  YNTML  Y       HHF   +A   F +M        P 
Sbjct: 86  GNFERARQLFDKIPEPNTVSYNTMLACY------LHHFGIHNARDFFDWM--------PV 131

Query: 100 PDNFTFPFVLKCCARLKLARQGKQL----------------HGFIT--KMGFGSDCY--- 138
            D  ++  +L   A++++  + ++L                 G++    +    +C+   
Sbjct: 132 RDTASWNTMLSGYAQVRMMDEARRLLVAMPEKNCVTWSAMVSGYVACGDLDAAVECFYAA 191

Query: 139 ------IMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
                    A+I  Y  FG +G+A  LF ++  + +V+W ++I G VD+ R    ++LF 
Sbjct: 192 PMKSVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFK 251

Query: 193 RMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS 252
            MLE GV+ N  ++ SVL  C+D  AL  G++VH +V  K  +       T+LI MY+K 
Sbjct: 252 TMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVC-KSPLSRDTTAVTSLISMYSKC 310

Query: 253 GCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL 312
           G ++ +              W AMISG A HG  ++A+ LF EM+   +KPD  T  AVL
Sbjct: 311 GDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVL 370

Query: 313 SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD 372
            AC +A +V      F+ M K +GI+   +H+GC+VDLL RAG L EA D + +MP KP 
Sbjct: 371 LACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKSMPFKPH 430

Query: 373 AVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVREL 432
             ++ TL+ AC++H+    AE   K  LE+    +  Y+  +NVYA+  KW + A VR+ 
Sbjct: 431 PAIFGTLLGACRIHKSMHMAEFAAKNLLELDPTSATGYVQLANVYAAQSKWEHVARVRKS 490

Query: 433 MNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEV 492
           M +  ++KPPG S IE++ A+HEF   D  HPE  +I  KLD++  K+K  GY P L   
Sbjct: 491 MKENNVVKPPGYSWIEINNAVHEFRSNDRLHPELVSIHEKLDKLETKMKLAGYVPDLEFA 550

Query: 493 LLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQR 552
           L ++ +E K   LL HSEKLA+A+GL++   G  IR+ KNLR C DCH  +K IS I  R
Sbjct: 551 LHDVGEELKEQLLLRHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSAIKYISAIEGR 610

Query: 553 DIIVRDRIRFHHFKNGDCSCKDYW 576
           +IIVRD  RFHHFK+G CSC DYW
Sbjct: 611 EIIVRDTTRFHHFKDGLCSCSDYW 634


>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:3128021-3130773 | 20130731
          Length = 810

 Score =  359 bits (922), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 192/535 (35%), Positives = 298/535 (55%), Gaps = 10/535 (1%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G++   RL+     + N   +NT++   + + +      A + F+ M          P N
Sbjct: 285 GEVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEE---AFATFLKMFEEKVE----PTN 337

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            +    L  C+ L    +GK +H  + +M   S+  +MN+LI MYS    + +A  +FD 
Sbjct: 338 VSMMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDN 397

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           +  +  V+W ++I G   +    EA+ LF  M   G++ +  T VSV+ A AD       
Sbjct: 398 LEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQA 457

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
           + +HG+   +  ++    V+TAL+DMYAK G IE+A              W AMI G  +
Sbjct: 458 KWIHGLAI-RTNMDTNVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGT 516

Query: 283 HGLCKEAIDLFLEMET-CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
           HGL K A+DLF +M+   ++KP++ T  +V+SAC ++  V E    F  MK+ YG+EP++
Sbjct: 517 HGLGKAALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSM 576

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
            H+G +VDLL RAG L +A  F++ MP+KP   +   ++ ACK+H++ E  E+   +  E
Sbjct: 577 DHYGAMVDLLGRAGKLDDAWKFIHEMPIKPGITVLGAMLGACKIHKNIELGEKAADRLFE 636

Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDY 461
           +  D+ G Y+L +N+YAS   W   A+VR  M KKGL K PG S +E    +H F  G  
Sbjct: 637 LDPDEGGYYMLVANMYASASMWDKVAKVRTAMEKKGLHKTPGCSLVEWRNEVHAFYSGST 696

Query: 462 NHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRT 521
           NHP++  I+  L+ + D+++  GY P  ++ + ++++  K   +  HSE+LA+A+GL+ T
Sbjct: 697 NHPQSKRIYAFLETLGDEIRAAGYVPD-NDSIHDVEEYVKEQLVSSHSERLAIAFGLLNT 755

Query: 522 SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
             G+ I + KNLR C DCHE  K IS +  R+IIVRD  RFHHFKNG CSC DYW
Sbjct: 756 RPGTTIHVRKNLRVCGDCHEATKYISLVTGREIIVRDLQRFHHFKNGRCSCGDYW 810



 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+ T   VL   A +K  R G+ +HG+  ++GF S   +  AL+ MY   G++   R +F
Sbjct: 235 DSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVF 294

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
            RM  ++VVSW ++IDGL  +    EA   F +M E  VE  + +++  L AC++ G L 
Sbjct: 295 QRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLE 354

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G+ VH ++ + K +    +V  +LI MY+K   ++ A              W AMI G 
Sbjct: 355 RGKFVHRLLDQMK-LSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGY 413

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           A +G   EA++LF  M++  +KPD  T  +V++A  +  + R+A  +   +  R  ++  
Sbjct: 414 AQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHG-LAIRTNMDTN 472

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           +     +VD+ A+ G ++ A +  + M  +   + W  +I     H
Sbjct: 473 VFVATALVDMYAKCGAIETARELFDMMQER-HVITWNAMIDGYGTH 517



 Score =  136 bits (342), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 215/471 (45%), Gaps = 46/471 (9%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
            T++SE  Q+   I+K G  N    +  +KL +       G +N A  +  S        
Sbjct: 47  TTSISELHQILPHIIKNGFYNQHLFQ--TKLISL--FCKFGTINEALRVFDSVETKLDVL 102

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           Y+T+L+ Y  +S       +LS  +   +R  +    P  + F ++L+ C      ++G 
Sbjct: 103 YHTLLKGYVKNS-------SLSESLSFFKRMQNDEVEPVVYDFTYLLQLCGENFDLKKGM 155

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++HG + K GF S+ + M +++++Y+    +  A ++F RMP+RD+V W +++ G   + 
Sbjct: 156 EVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNG 215

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              +A++L   M E G + +  T+VSVL A AD   L +GR VHG    +   +   NVS
Sbjct: 216 FARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGYAV-RLGFDSMVNVS 274

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           TAL+DMY K G +E+               W  +I GLA +G  +EA   FL+M    V+
Sbjct: 275 TALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVE 334

Query: 303 PDERTMTAVLSACRN-ADLVREAYM--VFSDMK------------------KRYGIEPTI 341
           P   +M   L AC N  DL R  ++  +   MK                  KR  I  ++
Sbjct: 335 PTNVSMMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASV 394

Query: 342 ---------QHFGCVVDLLARAGCLKEAEDF---MNAMPMKPDAVLWRTLIWACKVHEDT 389
                      +  ++   A+ GC+ EA +    M +  +KPD+  + ++I A      T
Sbjct: 395 FDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVT 454

Query: 390 ERAERLMKQHLEMGVDDSGSYILA-SNVYASVGKWSNKAEVRELMNKKGLI 439
            +A+ +    +   +D +     A  ++YA  G      E+ ++M ++ +I
Sbjct: 455 RQAKWIHGLAIRTNMDTNVFVATALVDMYAKCGAIETARELFDMMQERHVI 505


>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:28741911-28744729 | 20130731
          Length = 786

 Score =  358 bits (920), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 191/512 (37%), Positives = 289/512 (56%), Gaps = 36/512 (7%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P+  T   +L  CA LK  + GK++HGF  + G   + ++ +AL+ +Y+    +  AR +
Sbjct: 177 PNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMV 236

Query: 160 FDRMPDRDVVSWT-----------------------------------SLIDGLVDHDRP 184
           FD MP RDVVSW                                    ++I G +++ R 
Sbjct: 237 FDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRS 296

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
            EA+E+F +M + G + N+ T+ S+L AC+ S  L MG+++H  V    ++      +TA
Sbjct: 297 EEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVG-DLTSTTA 355

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           L+ MYAK G +  +              W  MI   A HG  KEA+ LF +M    V+P+
Sbjct: 356 LLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPN 415

Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
             T T VLS C ++ LV E   +F+ M + + +EP   H+ CVVD+ +RAG L EA  F+
Sbjct: 416 SVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFI 475

Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
             MPM+P A  W  L+ AC+V+++ E A+   K+  E+  ++ G+Y+   N+  +   WS
Sbjct: 476 QGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWS 535

Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
             ++VR LM ++G+ K PG S ++V   +H FV+GD ++ E+D I+  LDE+V+K+K  G
Sbjct: 536 EASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAG 595

Query: 485 YNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMK 544
           Y P    VL +ID EEKA  L +HSEKLA+A+G++  +  S IR+ KNLR C DCH  +K
Sbjct: 596 YKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIK 655

Query: 545 LISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            +SK+    I+VRD +RFHHFKNG+CSCKD W
Sbjct: 656 YMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687



 Score =  115 bits (288), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 138/300 (46%), Gaps = 13/300 (4%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHF--HALSLFIFMLRRPTHGVPAP 100
           GD N AR L  + P  +    +T++ A +     TH     A+ ++  +  R   G+  P
Sbjct: 26  GDFNRARQLFDNIPQPDPTTCSTLISALT-----THGLSNEAIKIYSSLQER---GI-KP 76

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D   F    K CA    A + K++H   T+ G  SD ++ NALIH Y     +  AR +F
Sbjct: 77  DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           D +  RDVVSWTSL    V    P + +++F  M  +GV+ N  TV S+L ACA+   L 
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G+++HG       +     V +AL+ +YAK   +  A              W  +++  
Sbjct: 197 SGKEIHGFAVRHGMV-VNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
             +   ++   LFL+M    V+ DE T  AV+  C       EA  +F  M+K  G +P 
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK-MGFKPN 314



 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 3/262 (1%)

Query: 143 LIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
           LI +    GD   AR+LFD +P  D  + ++LI  L  H    EAI+++  + E G++ +
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
               ++  +ACA SG     ++VH     +  +     V  ALI  Y K  C+E A    
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDAT-RCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136

Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
                     WT++ S     G  ++ +D+F EM    VKP+  T++++L AC     ++
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196

Query: 323 EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
               +      R+G+   +     +V L A+   ++EA    + MP + D V W  ++ A
Sbjct: 197 SGKEIHG-FAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTA 254

Query: 383 CKVHEDTERAERLMKQHLEMGV 404
              +++ E+   L  +    GV
Sbjct: 255 YFKNKEYEKGFSLFLKMSRDGV 276


>Medtr2g086150.1 | PPR containing plant-like protein | HC |
           chr2:36227786-36230819 | 20130731
          Length = 867

 Score =  358 bits (919), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 188/497 (37%), Positives = 291/497 (58%), Gaps = 10/497 (2%)

Query: 81  HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM 140
            A++LF  M R    GV  P++FT+  +L     + ++    ++H  + K  +     + 
Sbjct: 380 QAVNLFSQMRRE---GVK-PNHFTYSAILTVHYPVFVS----EMHAEVIKTNYERSSSVG 431

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
            AL+  Y   G+   A ++F+ +  +D+++W++++ G        EA +LF ++++ G++
Sbjct: 432 TALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIK 491

Query: 201 VNDATVVSVLRACAD-SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
            N+ T  SV+ ACA  + A   G++ H     K R+     VS+AL+ MYAK G I+SA 
Sbjct: 492 PNEFTFSSVINACASPTAAAEQGKQFHAYAI-KMRLNNALCVSSALVTMYAKRGNIDSAH 550

Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
                        W +MISG + HG  K+A+++F EM+  N+  D  T   V++AC +A 
Sbjct: 551 EVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAG 610

Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
           LV +    F+ M   + I PT++H+ C++DL +RAG L++A   +N MP  P A +WRTL
Sbjct: 611 LVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTL 670

Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
           + A +VH + E  E   ++ + +  +DS +Y+L SN+YA+ G W  +  VR+LM+K+ + 
Sbjct: 671 LGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVK 730

Query: 440 KPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDE 499
           K PG S IEV    + F+ GD  HP ++ I+ KL E+  +LK  GY P    V  +I+DE
Sbjct: 731 KEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDE 790

Query: 500 EKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDR 559
           +K T L HHSE+LA+A+GLI T     I+IVKNLR C DCH F KL+S + QR I+VRD 
Sbjct: 791 QKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDS 850

Query: 560 IRFHHFKNGDCSCKDYW 576
            RFHHFK+G CSC DYW
Sbjct: 851 NRFHHFKDGLCSCGDYW 867



 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 149/344 (43%), Gaps = 13/344 (3%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N +L +YS          AL+LF+ +L    H    PD  T   V   CA     + G+
Sbjct: 61  HNQLLFSYSRDKQTKE---ALNLFVSLL----HSSLQPDESTLSCVFNICAGSLDGKLGR 113

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           Q+H    K G      +  +L+ MY    ++   R +FD M +R+VVSWTSL+ G   + 
Sbjct: 114 QVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNG 173

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
                 ELF +M   GV  N  TV +V+ A  + G + +G +VH +V  K   E    V 
Sbjct: 174 LYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVV-KHGFEEAIPVF 232

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
            +LI +Y++ G +  A              W +MI+G   +G   E  ++F +M+   VK
Sbjct: 233 NSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVK 292

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC--LKEA 360
           P   T  +V+ +C +   +RE  +V     K      T         ++A + C  + +A
Sbjct: 293 PTHMTFASVIKSCAS---LRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDA 349

Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
               + M    + V W  +I  C  +   ++A  L  Q    GV
Sbjct: 350 LSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGV 393



 Score =  107 bits (267), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 141/319 (44%), Gaps = 34/319 (10%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P+ +T   V+       +   G Q+H  + K GF     + N+LI +YS  G L  AR++
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           FD+M  RD V+W S+I G V + + +E  E+F +M  AGV+    T  SV+++CA    L
Sbjct: 252 FDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLREL 311

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALID-------MYAKSGCIE---SAXXXXXXXXXXX 269
           ++           K ++CK   S    D       M A S C E   +            
Sbjct: 312 AL----------VKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKN 361

Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF- 328
              WTAMISG   +G   +A++LF +M    VKP+  T +A+L+           Y VF 
Sbjct: 362 VVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTV---------HYPVFV 412

Query: 329 SDMKK---RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
           S+M     +   E +      ++D   + G   +A      +  K D + W  ++     
Sbjct: 413 SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAK-DLMAWSAMLAGYAQ 471

Query: 386 HEDTERAERLMKQHLEMGV 404
             +TE A +L  Q ++ G+
Sbjct: 472 TGETEEAAKLFHQLIKEGI 490


>Medtr8g065730.2 | PPR containing plant-like protein | HC |
           chr8:27332922-27335168 | 20130731
          Length = 748

 Score =  357 bits (916), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 182/476 (38%), Positives = 275/476 (57%), Gaps = 1/476 (0%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D +TF  VL  C  +   ++GKQ+H +I +  +  + ++ +AL+ MY    ++  A  +F
Sbjct: 274 DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVF 333

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
            +M  ++VVSWT+++ G   +    EA++ F  M + G+E +D T+ SV+ +CA+  +L 
Sbjct: 334 KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 393

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G + H        I     VS AL+ +Y K G IE +              WTA++SG 
Sbjct: 394 EGAQFHARALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 452

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           A  G   E I LF  M    +KPD+ T   VLSAC  A LV +   +F  M   +GI P 
Sbjct: 453 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 512

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
             H+ C++DL +RAG ++EA +F+N MP  PDA+ W TL+ +C+ + + +  +   +  +
Sbjct: 513 QDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLM 572

Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
           E+   ++ SY+L S+VYA+ GKW   A +R+ M  KGL K PG S I+    +H F   D
Sbjct: 573 ELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADD 632

Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIR 520
            ++P +D I+ +L+++  K+ KEGY P ++ VL ++ D EK   L HHSEKLA+A+GL+ 
Sbjct: 633 KSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLF 692

Query: 521 TSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
              G  IR+VKNLR C DCH   K ISKI  R+I+VRD  RFH FK+G CSC D+W
Sbjct: 693 IPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  139 bits (349), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 187/438 (42%), Gaps = 68/438 (15%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           E    ++A  LH+ I+K        P  F      ++ +  G + YA  +    P  N Y
Sbjct: 21  ETHNFTKAKNLHSHIIK----TLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLY 76

Query: 62  YYNTMLRAYS---LSSDPTHHFHAL-----------------------SLFIFMLRRPTH 95
            +NT+L AYS     S+  + F A+                       S+  + L     
Sbjct: 77  SWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKND 136

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
           G    +  TF  +L   ++    + G+Q+HG + K GF S  ++ + L+ MYS  G +  
Sbjct: 137 GSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISC 196

Query: 156 ARELFDRMPD-------------------------------RDVVSWTSLIDGLVDHDRP 184
           AR++FD +P+                               RD +SWTS+I G   +   
Sbjct: 197 ARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLD 256

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VS 242
            +AI++F  M    ++++  T  SVL AC    AL  G++VH  +    R + K N  V+
Sbjct: 257 RDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI---IRTDYKDNIFVA 313

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           +AL++MY K   I+SA              WTAM+ G   +G  +EA+  F +M+   ++
Sbjct: 314 SALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PD+ T+ +V+S+C N   + E    F       G+   I     +V L  + G ++++  
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432

Query: 363 FMNAMPMKPDAVLWRTLI 380
             N +  K D V W  L+
Sbjct: 433 LFNEISFK-DEVTWTALV 449



 Score = 90.1 bits (222), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 33/267 (12%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPAL 58
           V  + E  Q+HA I++    +N        +F  +AL        ++  A  +       
Sbjct: 288 VMALQEGKQVHAYIIRTDYKDN--------IFVASALVEMYCKCKNIKSAEAVFKKMTCK 339

Query: 59  NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           N   +  ML  Y  +    +   A+  F  M +   +G+  PD+FT   V+  CA L   
Sbjct: 340 NVVSWTAMLVGYGQNG---YSEEAVKTFSDMQK---YGIE-PDDFTLGSVISSCANLASL 392

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
            +G Q H      G  S   + NAL+ +Y   G +  +  LF+ +  +D V+WT+L+ G 
Sbjct: 393 EEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 452

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV-------HGIVKE 231
               +  E I LF  ML  G++ +  T + VL AC+ +G +  G ++       HGIV  
Sbjct: 453 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 512

Query: 232 KKRIECKCNVSTALIDMYAKSGCIESA 258
           +    C       +ID+++++G IE A
Sbjct: 513 QDHYTC-------MIDLFSRAGRIEEA 532


>Medtr8g065730.1 | PPR containing plant-like protein | HC |
           chr8:27332922-27335168 | 20130731
          Length = 748

 Score =  357 bits (916), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 182/476 (38%), Positives = 275/476 (57%), Gaps = 1/476 (0%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D +TF  VL  C  +   ++GKQ+H +I +  +  + ++ +AL+ MY    ++  A  +F
Sbjct: 274 DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVF 333

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
            +M  ++VVSWT+++ G   +    EA++ F  M + G+E +D T+ SV+ +CA+  +L 
Sbjct: 334 KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 393

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G + H        I     VS AL+ +Y K G IE +              WTA++SG 
Sbjct: 394 EGAQFHARALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 452

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           A  G   E I LF  M    +KPD+ T   VLSAC  A LV +   +F  M   +GI P 
Sbjct: 453 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 512

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
             H+ C++DL +RAG ++EA +F+N MP  PDA+ W TL+ +C+ + + +  +   +  +
Sbjct: 513 QDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLM 572

Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
           E+   ++ SY+L S+VYA+ GKW   A +R+ M  KGL K PG S I+    +H F   D
Sbjct: 573 ELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADD 632

Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIR 520
            ++P +D I+ +L+++  K+ KEGY P ++ VL ++ D EK   L HHSEKLA+A+GL+ 
Sbjct: 633 KSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLF 692

Query: 521 TSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
              G  IR+VKNLR C DCH   K ISKI  R+I+VRD  RFH FK+G CSC D+W
Sbjct: 693 IPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  139 bits (349), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 187/438 (42%), Gaps = 68/438 (15%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           E    ++A  LH+ I+K        P  F      ++ +  G + YA  +    P  N Y
Sbjct: 21  ETHNFTKAKNLHSHIIK----TLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLY 76

Query: 62  YYNTMLRAYS---LSSDPTHHFHAL-----------------------SLFIFMLRRPTH 95
            +NT+L AYS     S+  + F A+                       S+  + L     
Sbjct: 77  SWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKND 136

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
           G    +  TF  +L   ++    + G+Q+HG + K GF S  ++ + L+ MYS  G +  
Sbjct: 137 GSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISC 196

Query: 156 ARELFDRMPD-------------------------------RDVVSWTSLIDGLVDHDRP 184
           AR++FD +P+                               RD +SWTS+I G   +   
Sbjct: 197 ARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLD 256

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VS 242
            +AI++F  M    ++++  T  SVL AC    AL  G++VH  +    R + K N  V+
Sbjct: 257 RDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI---IRTDYKDNIFVA 313

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           +AL++MY K   I+SA              WTAM+ G   +G  +EA+  F +M+   ++
Sbjct: 314 SALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PD+ T+ +V+S+C N   + E    F       G+   I     +V L  + G ++++  
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432

Query: 363 FMNAMPMKPDAVLWRTLI 380
             N +  K D V W  L+
Sbjct: 433 LFNEISFK-DEVTWTALV 449



 Score = 90.1 bits (222), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 33/267 (12%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPAL 58
           V  + E  Q+HA I++    +N        +F  +AL        ++  A  +       
Sbjct: 288 VMALQEGKQVHAYIIRTDYKDN--------IFVASALVEMYCKCKNIKSAEAVFKKMTCK 339

Query: 59  NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           N   +  ML  Y  +    +   A+  F  M +   +G+  PD+FT   V+  CA L   
Sbjct: 340 NVVSWTAMLVGYGQNG---YSEEAVKTFSDMQK---YGIE-PDDFTLGSVISSCANLASL 392

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
            +G Q H      G  S   + NAL+ +Y   G +  +  LF+ +  +D V+WT+L+ G 
Sbjct: 393 EEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 452

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV-------HGIVKE 231
               +  E I LF  ML  G++ +  T + VL AC+ +G +  G ++       HGIV  
Sbjct: 453 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 512

Query: 232 KKRIECKCNVSTALIDMYAKSGCIESA 258
           +    C       +ID+++++G IE A
Sbjct: 513 QDHYTC-------MIDLFSRAGRIEEA 532


>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:45164389-45168068 | 20130731
          Length = 766

 Score =  355 bits (911), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 180/436 (41%), Positives = 254/436 (58%), Gaps = 1/436 (0%)

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
           N +I  Y   GD+  AR+ FD MP RD VSW ++I G        EA+ +F  + + G  
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
           +N AT    L  CAD  AL +G+++HG    K      C V  AL+ MY K G I+ A  
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAV-KMGYGTGCFVGNALLAMYFKCGSIDEAND 450

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W  M++G A HG  ++A+ +F  M+T  VKPDE TM  VLSAC +  L
Sbjct: 451 TFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL 510

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           +      F  M K YG+ PT +H+ C++DLL RAG L+EA+D +  MP +P A  W  L+
Sbjct: 511 LDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570

Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
            A ++H +TE  E+  +   +M   +SG Y+L SN+YA+ G+W +  ++R  M   G+ K
Sbjct: 571 GASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQK 630

Query: 441 PPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE 500
            PG S +EV   +H F +GD +HPE + I+  L+E+  K+++EGY      VL ++++EE
Sbjct: 631 VPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEE 690

Query: 501 KATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRI 560
           K   L +HSEKLA+A+G++    G  IR++KNLR CEDCH  +K ISKI  R II+RD  
Sbjct: 691 KEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSH 750

Query: 561 RFHHFKNGDCSCKDYW 576
           RFHHF  G CSC DYW
Sbjct: 751 RFHHFNEGFCSCGDYW 766



 Score =  109 bits (272), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 31/298 (10%)

Query: 28  RNFSKLFT-FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
           RN S   T        GD+  AR      P  +   +  ++  Y+ S    H+  AL++F
Sbjct: 326 RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSG---HYEEALNMF 382

Query: 87  IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
           + + +       + +  TF   L  CA +     GKQ+HG   KMG+G+ C++ NAL+ M
Sbjct: 383 VEIKQDG----ESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAM 438

Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
           Y   G +  A + F+ + ++DVVSW +++ G   H    +A+ +F  M  AGV+ ++ T+
Sbjct: 439 YFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITM 498

Query: 207 VSVLRACADSGALSMG-------RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
           V VL AC+ +G L  G        K +G++   K   C       +ID+  ++G +E A 
Sbjct: 499 VGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTC-------MIDLLGRAGRLEEAQ 551

Query: 260 XXXXXX-XXXXXXXWTAMISGLASHG---LCKEAIDLFLEMETCNVKPDERTMTAVLS 313
                         W A++     HG   L ++A ++  +ME     P    M  +LS
Sbjct: 552 DLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME-----PQNSGMYVLLS 604



 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 111/267 (41%), Gaps = 32/267 (11%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D +  N ++  Y     LG AR LFD MP++DVVSW SL+ G   +    EA E+F  M 
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP 169

Query: 196 EAGVEVNDATVVSVL------RAC------ADSGALSMGRKVHGIVKEKK---------R 234
           E      +  + + +       AC      +D   +S    + G V++KK         +
Sbjct: 170 EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDK 229

Query: 235 IECKCNVS-TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
           +  +  +S   +I  YA+ G +  A              WTAM+SG   +G+  EA   F
Sbjct: 230 MPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFF 289

Query: 294 LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLAR 353
            EM   N +     M A     +  D+ RE   +F  M  R      I  +  ++    +
Sbjct: 290 DEMPEKN-EVSYNAMIAGYVQTKKMDIARE---LFESMPCR-----NISSWNTMITGYGQ 340

Query: 354 AGCLKEAEDFMNAMPMKPDAVLWRTLI 380
            G + +A  F + MP + D V W  +I
Sbjct: 341 IGDIAQARKFFDMMPQR-DCVSWAAII 366



 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 18/232 (7%)

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
           NA+I  Y       +AR LFD+MP+RD+ SW  ++ G V + R  +A  LF  M E  V 
Sbjct: 84  NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDV- 142

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
               +  S+L   A +G +   R+V   + EK  I         L+  Y  +G IE A  
Sbjct: 143 ---VSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISW-----NGLLAAYVHNGRIEEACL 194

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W  ++ G        +A  LF +M       D  +   ++S       
Sbjct: 195 LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPV----RDAISWNTMISGYAQGGG 250

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD 372
           + +A  +F +   R      +  +  +V    + G L EA+ F + MP K +
Sbjct: 251 LSQARRLFDESPTR-----DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNE 297


>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
           chr7:13795126-13792268 | 20130731
          Length = 952

 Score =  354 bits (908), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/556 (35%), Positives = 300/556 (53%), Gaps = 43/556 (7%)

Query: 56  PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
           P  N   +N++   Y     P      L++F  M+    +GV  PD  T   +L  C+ L
Sbjct: 405 PHRNVVTWNSLSSCYVNCGFPQK---GLNVFREMV---LNGVK-PDLVTMLSILHACSDL 457

Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSL- 174
           +  + GK +HGF  + G   D ++ NAL+ +Y+    +  A+ +FD +P R+V SW  + 
Sbjct: 458 QDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGIL 517

Query: 175 ----------------------------------IDGLVDHDRPVEAIELFGRMLEAGVE 200
                                             I G V + R  EA+E+F +M   G +
Sbjct: 518 TAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFK 577

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
            ++ T+ S+LRAC+ S  L MG+++H  V    + +     + AL+DMYAK G +  +  
Sbjct: 578 PDETTIYSILRACSLSECLRMGKEIHCYVFRHWK-DWDLARTNALVDMYAKCGGLSLSRN 636

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W  MI     HG  KEA+ LF +M    VKPD  T T VLSAC ++ L
Sbjct: 637 VFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSML 696

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           V E   +F+ M + + +EP  +H+ CVVD+ +RAGCL+EA  F+  MPM+P A+ W+  +
Sbjct: 697 VEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFL 756

Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
             C+V+++ E A+   K+  E+  + S +Y+   N+  +   WS  +++R+LM ++G+ K
Sbjct: 757 AGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITK 816

Query: 441 PPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE 500
            PG S   V   +H FV GD ++ E+D I+  LDE+  K+K  GY P    VL +ID EE
Sbjct: 817 TPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEE 876

Query: 501 KATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRI 560
           KA  L +HSEKLA+A+G++  +  S IR+ KNLR C DCH  +K +S +    I+VRD +
Sbjct: 877 KAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSL 936

Query: 561 RFHHFKNGDCSCKDYW 576
           RFHHFKNG+CSCKD+W
Sbjct: 937 RFHHFKNGNCSCKDFW 952



 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 170/378 (44%), Gaps = 39/378 (10%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD      +L  C++LK  + GK +HGF  K G   D ++  AL+++Y+    +  A+ +
Sbjct: 341 PDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTV 400

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           FD MP R+VV+W SL    V+   P + + +F  M+  GV+ +  T++S+L AC+D   L
Sbjct: 401 FDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDL 460

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA--------------------- 258
             G+ +HG       +E    V  AL+ +YAK  C+  A                     
Sbjct: 461 KSGKVIHGFAVRHGMVE-DVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTA 519

Query: 259 --------------XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
                                       W+ +I G   +   +EA+++F +M+T   KPD
Sbjct: 520 YFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPD 579

Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
           E T+ ++L AC  ++ +R    +   + + +  +  +     +VD+ A+ G L  + +  
Sbjct: 580 ETTIYSILRACSLSECLRMGKEIHCYVFRHWK-DWDLARTNALVDMYAKCGGLSLSRNVF 638

Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLM-KQHLEMGVDDSGSYILASNVYASVGKW 423
           + MP+K D   W T+I+A  +H + + A  L  K  L M   DS ++    +  +     
Sbjct: 639 DMMPIK-DVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLV 697

Query: 424 SNKAEVRELMNKKGLIKP 441
               ++   M++  L++P
Sbjct: 698 EEGVQIFNSMSRDHLVEP 715



 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 7/279 (2%)

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   +L  C+ L+  + GK++HGF+ + G   D ++ +A ++ Y+    +  A+ +FD 
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           MP RDVV+W SL    V+   P + + +F  M+  GV+ +  TV  +L AC+D   L  G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
           + +HG   +   +E    VS AL+++Y    C+  A              W ++ S   +
Sbjct: 262 KAIHGFALKHGMVE-NVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
            G  ++ +++F EM    VKPD   M+++L AC     ++    +     K   +E    
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDV-- 378

Query: 343 HFGC--VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
            F C  +V+L A   C++EA+   + MP + + V W +L
Sbjct: 379 -FVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSL 415



 Score =  127 bits (318), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 3/280 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD   F  V K CA  + A + KQ H   T+ G  SD  I NA IH Y     +  AR +
Sbjct: 38  PDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRV 97

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           FD +  RDVV+W SL    V+   P + + +F +M    V+ N  TV S+L  C+D   L
Sbjct: 98  FDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDL 157

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G+++HG V     +E    VS+A ++ YAK  C+  A              W ++ S 
Sbjct: 158 KSGKEIHGFVVRHGMVE-DVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSC 216

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
             + G  ++ +++F EM    VKPD  T++ +LSAC +   ++    +      ++G+  
Sbjct: 217 YVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHG-FALKHGMVE 275

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
            +     +V+L     C++EA+   + MP + + + W +L
Sbjct: 276 NVFVSNALVNLYESCLCVREAQAVFDLMPHR-NVITWNSL 314



 Score =  126 bits (316), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 145/299 (48%), Gaps = 3/299 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD  T   +L  C+ L+  + GK +HGF  K G   + ++ NAL+++Y     +  A+ +
Sbjct: 240 PDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAV 299

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           FD MP R+V++W SL    V+   P + + +F  M   GV+ +   + S+L AC+    L
Sbjct: 300 FDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDL 359

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G+ +HG   +   +E    V TAL+++YA   C+  A              W ++ S 
Sbjct: 360 KSGKTIHGFAVKHGMVE-DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSC 418

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
             + G  ++ +++F EM    VKPD  TM ++L AC +   ++    V      R+G+  
Sbjct: 419 YVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG-KVIHGFAVRHGMVE 477

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
            +     ++ L A+  C++EA+   + +P + +   W  ++ A   +++ E+   +  Q
Sbjct: 478 DVFVCNALLSLYAKCVCVREAQVVFDLIPHR-EVASWNGILTAYFTNKEYEKGLYMFSQ 535



 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 7/203 (3%)

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
           + H  P EAI+++      G++ +    ++V +ACA S      ++ H    +  R    
Sbjct: 16  IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFH---DDATRCGVM 72

Query: 239 CNVS--TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
            +VS   A I  Y K  C+E A              W ++ +   + G  ++ +++F +M
Sbjct: 73  SDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKM 132

Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
               VK +  T++++L  C +   ++    +      R+G+   +      V+  A+  C
Sbjct: 133 GLNKVKANPLTVSSILPGCSDLQDLKSGKEIHG-FVVRHGMVEDVFVSSAFVNFYAKCLC 191

Query: 357 LKEAEDFMNAMPMKPDAVLWRTL 379
           ++EA+   + MP + D V W +L
Sbjct: 192 VREAQTVFDLMPHR-DVVTWNSL 213


>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:2861060-2858958 | 20130731
          Length = 700

 Score =  353 bits (906), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 182/476 (38%), Positives = 277/476 (58%), Gaps = 1/476 (0%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+ T+  V+  C +++    G Q+H  + K G   D ++ + L+ M+   GD+  AR++F
Sbjct: 226 DSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVF 285

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           D + +R+VV WTSL+   + +    E + L   M   G   N+ T   +L A A   AL 
Sbjct: 286 DGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALR 345

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G  +H  V EK  I+ +  V  ALI+MY+K GCI+S+              W AMI G 
Sbjct: 346 HGDLLHARV-EKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGY 404

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           + HGL K+A+ LF +M +    P+  T   VLSAC +  LV E +   + + K + +EP 
Sbjct: 405 SQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPG 464

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
           ++H+ CVV +L RAG L+EAE+FM    +K D V WR L+ AC +H +     ++ +  L
Sbjct: 465 LEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETIL 524

Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
           +M   D G+Y L SN+YA    W +   +R++M ++ + K PG S IE+  A+H F    
Sbjct: 525 QMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDG 584

Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIR 520
            NHPE   I+ K+  +++ +K+ GY P +  VL +++DE+K + L +HSEKLA+AYGL++
Sbjct: 585 SNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMK 644

Query: 521 TSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
               + IR++KNLR CEDCH  +KLISK+  R IIVRD  RFHHF++G C+C D+W
Sbjct: 645 IPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 15/364 (4%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
           L  AR L       +   YN ++  Y  S +   H   + LF    +     +  P+ + 
Sbjct: 71  LRLARYLFDEMSLRSVVSYNVLMGGYLHSGE---HLEVVKLF----KNMVSSLYQPNEYV 123

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM- 163
           F  VL  CA      +G Q HGF+ K G     ++ ++L+HMYS    + +A ++ +   
Sbjct: 124 FTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEH 183

Query: 164 ----PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
                D D   + S+++ LV+  R  EA+E+ GRM++ GV  +  T VSV+  C     L
Sbjct: 184 GNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDL 243

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
            +G +VH  +  K  +     V + L+DM+ K G + SA              WT++++ 
Sbjct: 244 GLGLQVHAQLL-KGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTA 302

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
              +G  +E ++L   M+      +E T   +L+A      +R   ++ + ++K  GI+ 
Sbjct: 303 YLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEK-LGIKN 361

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            +     ++++ ++ GC+  + D    M  + D + W  +I     H   ++A  L +  
Sbjct: 362 RVIVGNALINMYSKCGCIDSSYDVFFDMRNR-DIITWNAMICGYSQHGLGKQALLLFQDM 420

Query: 400 LEMG 403
           L  G
Sbjct: 421 LSAG 424



 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 11/257 (4%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           ++  +   LQ+HAQ+LK G + +     F            GD+  AR +       N  
Sbjct: 239 QIRDLGLGLQVHAQLLKGGLTFDV----FVGSMLVDMFGKCGDVLSARKVFDGLQNRNVV 294

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            + +++ AY  + +       L+L   M R  T      + FTF  +L   A +   R G
Sbjct: 295 VWTSLMTAYLQNGEFE---ETLNLLSCMDREGT----MSNEFTFAVLLNAFAGMAALRHG 347

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
             LH  + K+G  +   + NALI+MYS  G +  + ++F  M +RD+++W ++I G   H
Sbjct: 348 DLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQH 407

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
               +A+ LF  ML AG   N  T V VL ACA    ++ G      + +  ++E     
Sbjct: 408 GLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEH 467

Query: 242 STALIDMYAKSGCIESA 258
            T ++ +  ++G +E A
Sbjct: 468 YTCVVAVLCRAGMLEEA 484



 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 8/248 (3%)

Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV 199
           +N+LI++Y     L +AR LFD M  R VVS+  L+ G +     +E ++LF  M+ +  
Sbjct: 58  LNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLY 117

Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
           + N+    +VL ACA SG +  G + HG +  K  +     V ++L+ MY+K   ++ A 
Sbjct: 118 QPNEYVFTTVLSACAHSGRVFEGMQCHGFLF-KFGLVFHHFVKSSLVHMYSKCFHVDLAL 176

Query: 260 XXXXXXXXXX-----XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
                             + ++++ L   G   EA+++   M    V  D  T  +V+  
Sbjct: 177 QVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGL 236

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C     +     V + + K  G+   +     +VD+  + G +  A    + +  + + V
Sbjct: 237 CGQIRDLGLGLQVHAQLLKG-GLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR-NVV 294

Query: 375 LWRTLIWA 382
           +W +L+ A
Sbjct: 295 VWTSLMTA 302


>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:14170762-14173219 | 20130731
          Length = 503

 Score =  352 bits (904), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 179/437 (40%), Positives = 265/437 (60%), Gaps = 4/437 (0%)

Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV 199
           MN +I      G+  +A+++FD+MP RDVV+W ++I G V + R ++A+ +F  ML+A V
Sbjct: 71  MNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKV 130

Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
           E +  T  SV+  CA  G+    + VHG++ EKK +E    ++ AL+DMYAK G ++ + 
Sbjct: 131 EPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKK-VELNYILTAALVDMYAKCGRVDVSK 189

Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
                        W AMI+GLA HG   +A  +F  ME  NV PD  T   +L  C +  
Sbjct: 190 EVFECVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGILKGCSHCG 249

Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
           LV      F  M+ R+ I+P ++H+G +VDLL RAG L+EA   + AM ++PD V+WR+L
Sbjct: 250 LVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAMSVEPDVVIWRSL 309

Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI 439
           + AC++H   E  E  +     +   +SG ++L SN+Y S   W     VR +M K G+ 
Sbjct: 310 LSACRIHGKKELGEFAIANISRL---ESGDFVLLSNMYCSFKNWHGAERVRHMMKKGGVR 366

Query: 440 KPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDE 499
           K  G S IE+ G++H+F   D +H E   I+  L+ ++ + K EG+ P    VL+++ +E
Sbjct: 367 KKRGKSWIELGGSIHQFNAADQSHAEMKAIYRVLEGLMQRAKLEGFTPLTELVLMDVSEE 426

Query: 500 EKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDR 559
           EK   L  HSEKLALAYG++++S G+KI I KNLR C+DCH ++K++S+I  R+IIVRDR
Sbjct: 427 EKEANLTFHSEKLALAYGVLKSSPGTKITISKNLRICQDCHNWIKIVSRILNREIIVRDR 486

Query: 560 IRFHHFKNGDCSCKDYW 576
           IRFH F+ G CSC DYW
Sbjct: 487 IRFHQFEGGCCSCGDYW 503



 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 8/256 (3%)

Query: 30  FSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFM 89
           F+      +L  SG+ + A+ +    P  +   +NT++  Y           ALS+F  M
Sbjct: 69  FNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYV---KNLRFLDALSIFRVM 125

Query: 90  LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV 149
           L+        PD FTF  V+  CARL      K +HG + +     +  +  AL+ MY+ 
Sbjct: 126 LKAKVE----PDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAK 181

Query: 150 FGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
            G + V++E+F+ +    V  W ++I+GL  H   ++A  +F RM    V  +  T V +
Sbjct: 182 CGRVDVSKEVFECVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGI 241

Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX- 268
           L+ C+  G + +GRK   +++ +  I+ +      ++D+  ++G +E A           
Sbjct: 242 LKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAMSVEP 301

Query: 269 XXXXWTAMISGLASHG 284
               W +++S    HG
Sbjct: 302 DVVIWRSLLSACRIHG 317


>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:15046911-15042560 | 20130731
          Length = 737

 Score =  352 bits (903), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 188/489 (38%), Positives = 277/489 (56%), Gaps = 12/489 (2%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGS-------DCYIMNALIHMYSVFGD 152
           P+  T   +L  CA +     GK+ H +  K            D  ++NALI MY+    
Sbjct: 249 PNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKS 308

Query: 153 LGVARELFDRM--PDRDVVSWTSLIDGLVDHDRPVEAIELFGRM--LEAGVEVNDATVVS 208
           L VAR +FD +   DRDVV+WT +I G   H     A++LF  M  ++  +  ND T+  
Sbjct: 309 LEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISC 368

Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKC-NVSTALIDMYAKSGCIESAXXXXXXXXX 267
           VL +CA   AL+ G+++H  V  +  I      V+  LIDMY+KSG +++A         
Sbjct: 369 VLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK 428

Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
                WT++++G   HG  ++A  +F EM    + PD  T   VL AC ++ +V     +
Sbjct: 429 RNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINL 488

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           F  M K +G++P ++H+ C+VDLL RAG L EA   +N M M+P  V+W +L+ AC+ H 
Sbjct: 489 FYRMSKDFGVDPGVEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWISLLSACRTHS 548

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
           + E AE   K+ LE+  D+ G+Y L SN+YA+  +W + A +R LM + G+ K PG S +
Sbjct: 549 NIELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWV 608

Query: 448 EVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLH 507
           +    +  F +GD  H ++  I+  L +++ ++K  GY P+ +  L ++DDEEK  QLL 
Sbjct: 609 QGRKGMETFYVGDRTHSQSLKIYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLLE 668

Query: 508 HSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKN 567
           HSEKLALAY ++    G+ IRI KNLR C DCH  +  IS I + +II+RD  RFHHFKN
Sbjct: 669 HSEKLALAYAILTLPPGAPIRITKNLRICGDCHSAITYISMIVEHEIILRDSSRFHHFKN 728

Query: 568 GDCSCKDYW 576
           G CSCK YW
Sbjct: 729 GSCSCKGYW 737



 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 194/451 (43%), Gaps = 70/451 (15%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLN---YARLL---LTSN 55
           E++       +H  +++LG  +N    N       A +S  G      +AR +   L   
Sbjct: 22  EISNFELGASIHGCVIRLGFESNVFVCN-------AVISMYGKCKAVVHARKVFDELCYR 74

Query: 56  PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA-PDNFTFPFVLKCCAR 114
              +S  +N+++  YS    P     A+SLF    R  T G    PD      +L  C  
Sbjct: 75  GICDSVTWNSIVSVYSHCFVPNV---AVSLF----REMTVGYGILPDTVGVVNILPVCGY 127

Query: 115 LKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP---------- 164
           L L   G+Q+HGF  + G   D ++ NAL+ MY+  G +  A ++F+RM           
Sbjct: 128 LGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAM 187

Query: 165 -------------------------DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV 199
                                    + DVV+W+S+I G        EA+++F +M     
Sbjct: 188 VTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRC 247

Query: 200 EVNDATVVSVLRACADSGALSMGRKVHG-----IVKEKKRIEC-KCNVSTALIDMYAKSG 253
             N  T++S+L ACA  GAL  G++ H      I+K +   +     V  ALIDMYAK  
Sbjct: 248 RPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCK 307

Query: 254 CIESAXXXXXXX--XXXXXXXWTAMISGLASHGLCKEAIDLFLEM---ETCNVKPDERTM 308
            +E A                WT MI G A HG    A+ LF EM   + C V P++ T+
Sbjct: 308 SLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIV-PNDFTI 366

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG-CVVDLLARAGCLKEAEDFMNAM 367
           + VL +C     +     + + + +R  I   +     C++D+ +++G +  A+   ++M
Sbjct: 367 SCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSM 426

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
             K +AV W +L+    +H  +E A R+  +
Sbjct: 427 S-KRNAVSWTSLLTGYGMHGRSEDAFRVFDE 456



 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 147/350 (42%), Gaps = 47/350 (13%)

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
            PD++TFPFV K C  +     G  +HG + ++GF S+ ++ NA+I MY     +  AR+
Sbjct: 7   TPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARK 66

Query: 159 LFDRMPDR---DVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACA 214
           +FD +  R   D V+W S++        P  A+ LF  M +  G+  +   VV++L  C 
Sbjct: 67  VFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCG 126

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
             G    GR+VHG       +E    V  AL+DMYAK G +E A              W 
Sbjct: 127 YLGLGLCGRQVHGFCVRSGLVE-DVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWN 185

Query: 275 AM-----------------------------------ISGLASHGLCKEAIDLFLEMETC 299
           AM                                   ISG A  G   EA+D+F +M  C
Sbjct: 186 AMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC 245

Query: 300 NVKPDERTMTAVLSACRNADLV-----REAYMVFSDMKKRYGIEP-TIQHFGCVVDLLAR 353
             +P+  T+ ++LSAC +   +        Y V   +K  +  +   +     ++D+ A+
Sbjct: 246 RCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAK 305

Query: 354 AGCLKEAEDFMNAM-PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
              L+ A    + + P   D V W  +I     H D   A +L  +  ++
Sbjct: 306 CKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKI 355


>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:7700828-7696262 | 20130731
          Length = 857

 Score =  351 bits (901), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 188/474 (39%), Positives = 277/474 (58%), Gaps = 3/474 (0%)

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           FTF  V+K C        G+Q+HG + K     D ++ ++L+ +YS FG++      F+ 
Sbjct: 256 FTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEM 315

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
            P  DVVSWTS I G V + +    + LF R L  G ++++  V SV+ ACAD  A   G
Sbjct: 316 TPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTG 375

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            ++ G    K  +     V    I MYAKSG I+SA              W+ MI   A 
Sbjct: 376 EQIQGYAL-KFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQ 434

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           HG  KE++ LF  M    + P++ T+  VL+AC +  LV E    +  MKK YG+   ++
Sbjct: 435 HGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVK 494

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
           H  C+VDLL RAG L+EA+ F+     + D VLWR L+ ACKVH+DTE  +R+  + +E+
Sbjct: 495 HSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVIEL 554

Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
              ++ SY+L  N+Y  VGK  +  EVR+LM  +G+ K PG S IEV   +H F++ D +
Sbjct: 555 EPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRS 614

Query: 463 HPEADNIFVKLDEMVDKLKKEGY-NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRT 521
           HP ++ I+ +L E++ K+K+  + N KL+  + E + +    ++ HHSEKLA+ +G+I  
Sbjct: 615 HPISELIYSRLGELLAKIKEISFDNEKLAFYISETE-QSGTVRMSHHSEKLAVTFGIISL 673

Query: 522 SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
              + +R++KNLR C DCH  MKLISK+ +R+II+RD IRFHHFK+G CSCKDY
Sbjct: 674 PISAPVRVMKNLRVCSDCHTTMKLISKVEKREIILRDAIRFHHFKDGVCSCKDY 727



 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/405 (22%), Positives = 176/405 (43%), Gaps = 26/405 (6%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
           +HA IL  G  N  +    S +  +   S    +  +R L  ++   ++  +N+++ AY+
Sbjct: 63  IHASILINGFLNKTSSFLNSLINMY---SKCNQIQTSRFLFDNSSIKDNVSWNSIISAYA 119

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL--KLARQGKQLHGFIT 129
                T +     L ++ + R  +   A  ++T   VL  C          G+ +HGF  
Sbjct: 120 KLGTKTSYGEVFQL-VYRMHRFGY---AFSDYTLSSVLNACCFCVDDNCFYGRLIHGFGI 175

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFD--RMPDRDVVSWTSLIDGLVDH----DR 183
           K+G   +  +  AL+ MY+  G L  A  +F+   +  ++   + ++I G +      + 
Sbjct: 176 KLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCEN 235

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             EA+ +F  M   GV+ +  T  SV++AC  +G   +GR++HG V  K  +E    V++
Sbjct: 236 AREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVL-KNSLEGDEFVAS 294

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           +L+D+Y+  G I+                WT+ I+G   +G  +  + LF        K 
Sbjct: 295 SLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKL 354

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV----VDLLARAGCLKE 359
           DE  +++V+ AC +    R    +     + Y ++  +  F  V    + + A++G +  
Sbjct: 355 DEFIVSSVMGACADMAAARTGEQI-----QGYALKFGVADFTVVKNTQICMYAKSGDIDS 409

Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
           A +       KPD V W  +I +   H   + + RL +     G+
Sbjct: 410 ARNTFQETE-KPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGI 453



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D F    V+  CA +  AR G+Q+ G+  K G      + N  I MY+  GD+  AR  F
Sbjct: 355 DEFIVSSVMGACADMAAARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTF 414

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
                 DVVSW+ +I     H    E++ LF  M  +G+  N  T++ VL AC+  G + 
Sbjct: 415 QETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVD 474

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
            G   +  +K+   +      S  ++D+  ++G +E A
Sbjct: 475 EGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEA 512


>Medtr8g069550.1 | PPR containing plant-like protein | HC |
           chr8:29180878-29178605 | 20130731
          Length = 757

 Score =  350 bits (899), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 181/476 (38%), Positives = 274/476 (57%), Gaps = 1/476 (0%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D +TF  VL  C  +   ++GKQ+H +I +  +  + ++ +AL+ MY    ++  A  +F
Sbjct: 283 DQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVF 342

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
            +M  ++VVSWT+++ G   +    EA++ F  M + G+E +D T+ SV+ +CA+  +L 
Sbjct: 343 KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 402

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G + H        I     VS AL+ +Y K G IE +              WTA++SG 
Sbjct: 403 EGAQFHARALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 461

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           A  G   E I LF  M    +KPD+ T   VLSAC  A LV +   +F  M   +GI P 
Sbjct: 462 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 521

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
             H+ C++DL +RAG ++EA +F+N MP  PDA+ W TL+ +C+ + + +  +   +  +
Sbjct: 522 QDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLM 581

Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
           E+   ++ SY+L S+VYA+ GKW   A +R+ M  KGL K PG S I+    +H F   D
Sbjct: 582 ELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADD 641

Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIR 520
            ++P +D I+ +L+++  K+ KEGY P ++ VL ++ D EK   L HHSEKLA+A+GL+ 
Sbjct: 642 KSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLF 701

Query: 521 TSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
              G  IR+VKNLR C DCH   K ISKI  R+I+VRD  RFH FK+G CS  D+W
Sbjct: 702 IPPGLPIRVVKNLRVCSDCHNATKYISKITHREILVRDTARFHLFKDGTCSYGDFW 757



 Score =  134 bits (337), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 186/438 (42%), Gaps = 68/438 (15%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           E    ++A  LH+ I+K        P  F      ++ +  G + YA  +    P  N Y
Sbjct: 30  ETRNFTKAKNLHSHIIK----TLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLY 85

Query: 62  YYNTMLRAYS---LSSDPTHHFHAL-----------------------SLFIFMLRRPTH 95
            +NT+L AYS     S+  + F A+                       S+  + L     
Sbjct: 86  SWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKND 145

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
           G    +  TF  +L   ++    + G+Q+HG + K GF S  ++ + L+ MYS  G +  
Sbjct: 146 GSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISC 205

Query: 156 ARELFDRMPD-------------------------------RDVVSWTSLIDGLVDHDRP 184
           AR++FD +P+                               RD +SWTS+I G   +   
Sbjct: 206 ARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLD 265

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VS 242
            +AI++F  M    ++++  T  SVL AC    AL  G++VH  +    R + K N  V+
Sbjct: 266 RDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI---IRTDYKDNIFVA 322

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           +AL+ MY K   I+SA              WTAM+ G   +G  +EA+  F +M+   ++
Sbjct: 323 SALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 382

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PD+ T+ +V+S+C N   + E    F       G+   I     +V L  + G ++++  
Sbjct: 383 PDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 441

Query: 363 FMNAMPMKPDAVLWRTLI 380
             N +  K D V W  L+
Sbjct: 442 LFNEISFK-DEVTWTALV 458



 Score = 89.7 bits (221), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 33/267 (12%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPAL 58
           V  + E  Q+HA I++    +N        +F  +AL        ++  A  +       
Sbjct: 297 VMALQEGKQVHAYIIRTDYKDN--------IFVASALVVMYCKCKNIKSAEAVFKKMTCK 348

Query: 59  NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           N   +  ML  Y  +    +   A+  F  M +   +G+  PD+FT   V+  CA L   
Sbjct: 349 NVVSWTAMLVGYGQNG---YSEEAVKTFSDMQK---YGIE-PDDFTLGSVISSCANLASL 401

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
            +G Q H      G  S   + NAL+ +Y   G +  +  LF+ +  +D V+WT+L+ G 
Sbjct: 402 EEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 461

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV-------HGIVKE 231
               +  E I LF  ML  G++ +  T + VL AC+ +G +  G ++       HGIV  
Sbjct: 462 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 521

Query: 232 KKRIECKCNVSTALIDMYAKSGCIESA 258
           +    C       +ID+++++G IE A
Sbjct: 522 QDHYTC-------MIDLFSRAGRIEEA 541


>Medtr8g069550.2 | PPR containing plant-like protein | HC |
           chr8:29180878-29178605 | 20130731
          Length = 757

 Score =  350 bits (899), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 181/476 (38%), Positives = 274/476 (57%), Gaps = 1/476 (0%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D +TF  VL  C  +   ++GKQ+H +I +  +  + ++ +AL+ MY    ++  A  +F
Sbjct: 283 DQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVF 342

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
            +M  ++VVSWT+++ G   +    EA++ F  M + G+E +D T+ SV+ +CA+  +L 
Sbjct: 343 KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 402

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G + H        I     VS AL+ +Y K G IE +              WTA++SG 
Sbjct: 403 EGAQFHARALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 461

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           A  G   E I LF  M    +KPD+ T   VLSAC  A LV +   +F  M   +GI P 
Sbjct: 462 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 521

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
             H+ C++DL +RAG ++EA +F+N MP  PDA+ W TL+ +C+ + + +  +   +  +
Sbjct: 522 QDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLM 581

Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
           E+   ++ SY+L S+VYA+ GKW   A +R+ M  KGL K PG S I+    +H F   D
Sbjct: 582 ELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADD 641

Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIR 520
            ++P +D I+ +L+++  K+ KEGY P ++ VL ++ D EK   L HHSEKLA+A+GL+ 
Sbjct: 642 KSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLF 701

Query: 521 TSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
              G  IR+VKNLR C DCH   K ISKI  R+I+VRD  RFH FK+G CS  D+W
Sbjct: 702 IPPGLPIRVVKNLRVCSDCHNATKYISKITHREILVRDTARFHLFKDGTCSYGDFW 757



 Score =  134 bits (337), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 186/438 (42%), Gaps = 68/438 (15%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           E    ++A  LH+ I+K        P  F      ++ +  G + YA  +    P  N Y
Sbjct: 30  ETRNFTKAKNLHSHIIK----TLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLY 85

Query: 62  YYNTMLRAYS---LSSDPTHHFHAL-----------------------SLFIFMLRRPTH 95
            +NT+L AYS     S+  + F A+                       S+  + L     
Sbjct: 86  SWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKND 145

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
           G    +  TF  +L   ++    + G+Q+HG + K GF S  ++ + L+ MYS  G +  
Sbjct: 146 GSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISC 205

Query: 156 ARELFDRMPD-------------------------------RDVVSWTSLIDGLVDHDRP 184
           AR++FD +P+                               RD +SWTS+I G   +   
Sbjct: 206 ARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLD 265

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VS 242
            +AI++F  M    ++++  T  SVL AC    AL  G++VH  +    R + K N  V+
Sbjct: 266 RDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI---IRTDYKDNIFVA 322

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           +AL+ MY K   I+SA              WTAM+ G   +G  +EA+  F +M+   ++
Sbjct: 323 SALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 382

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PD+ T+ +V+S+C N   + E    F       G+   I     +V L  + G ++++  
Sbjct: 383 PDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 441

Query: 363 FMNAMPMKPDAVLWRTLI 380
             N +  K D V W  L+
Sbjct: 442 LFNEISFK-DEVTWTALV 458



 Score = 89.7 bits (221), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 33/267 (12%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPAL 58
           V  + E  Q+HA I++    +N        +F  +AL        ++  A  +       
Sbjct: 297 VMALQEGKQVHAYIIRTDYKDN--------IFVASALVVMYCKCKNIKSAEAVFKKMTCK 348

Query: 59  NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           N   +  ML  Y  +    +   A+  F  M +   +G+  PD+FT   V+  CA L   
Sbjct: 349 NVVSWTAMLVGYGQNG---YSEEAVKTFSDMQK---YGIE-PDDFTLGSVISSCANLASL 401

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
            +G Q H      G  S   + NAL+ +Y   G +  +  LF+ +  +D V+WT+L+ G 
Sbjct: 402 EEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 461

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV-------HGIVKE 231
               +  E I LF  ML  G++ +  T + VL AC+ +G +  G ++       HGIV  
Sbjct: 462 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 521

Query: 232 KKRIECKCNVSTALIDMYAKSGCIESA 258
           +    C       +ID+++++G IE A
Sbjct: 522 QDHYTC-------MIDLFSRAGRIEEA 541


>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:7700828-7697127 | 20130731
          Length = 774

 Score =  350 bits (897), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 188/474 (39%), Positives = 277/474 (58%), Gaps = 3/474 (0%)

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           FTF  V+K C        G+Q+HG + K     D ++ ++L+ +YS FG++      F+ 
Sbjct: 256 FTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEM 315

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
            P  DVVSWTS I G V + +    + LF R L  G ++++  V SV+ ACAD  A   G
Sbjct: 316 TPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTG 375

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            ++ G    K  +     V    I MYAKSG I+SA              W+ MI   A 
Sbjct: 376 EQIQGYAL-KFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQ 434

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           HG  KE++ LF  M    + P++ T+  VL+AC +  LV E    +  MKK YG+   ++
Sbjct: 435 HGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVK 494

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
           H  C+VDLL RAG L+EA+ F+     + D VLWR L+ ACKVH+DTE  +R+  + +E+
Sbjct: 495 HSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVIEL 554

Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYN 462
              ++ SY+L  N+Y  VGK  +  EVR+LM  +G+ K PG S IEV   +H F++ D +
Sbjct: 555 EPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRS 614

Query: 463 HPEADNIFVKLDEMVDKLKKEGY-NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRT 521
           HP ++ I+ +L E++ K+K+  + N KL+  + E + +    ++ HHSEKLA+ +G+I  
Sbjct: 615 HPISELIYSRLGELLAKIKEISFDNEKLAFYISETE-QSGTVRMSHHSEKLAVTFGIISL 673

Query: 522 SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
              + +R++KNLR C DCH  MKLISK+ +R+II+RD IRFHHFK+G CSCKDY
Sbjct: 674 PISAPVRVMKNLRVCSDCHTTMKLISKVEKREIILRDAIRFHHFKDGVCSCKDY 727



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/405 (22%), Positives = 176/405 (43%), Gaps = 26/405 (6%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
           +HA IL  G  N  +    S +  +   S    +  +R L  ++   ++  +N+++ AY+
Sbjct: 63  IHASILINGFLNKTSSFLNSLINMY---SKCNQIQTSRFLFDNSSIKDNVSWNSIISAYA 119

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL--KLARQGKQLHGFIT 129
                T +     L ++ + R  +   A  ++T   VL  C          G+ +HGF  
Sbjct: 120 KLGTKTSYGEVFQL-VYRMHRFGY---AFSDYTLSSVLNACCFCVDDNCFYGRLIHGFGI 175

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFD--RMPDRDVVSWTSLIDGLVDH----DR 183
           K+G   +  +  AL+ MY+  G L  A  +F+   +  ++   + ++I G +      + 
Sbjct: 176 KLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCEN 235

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             EA+ +F  M   GV+ +  T  SV++AC  +G   +GR++HG V  K  +E    V++
Sbjct: 236 AREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVL-KNSLEGDEFVAS 294

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           +L+D+Y+  G I+                WT+ I+G   +G  +  + LF        K 
Sbjct: 295 SLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKL 354

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV----VDLLARAGCLKE 359
           DE  +++V+ AC +    R    +     + Y ++  +  F  V    + + A++G +  
Sbjct: 355 DEFIVSSVMGACADMAAARTGEQI-----QGYALKFGVADFTVVKNTQICMYAKSGDIDS 409

Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
           A +       KPD V W  +I +   H   + + RL +     G+
Sbjct: 410 ARNTFQETE-KPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGI 453



 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D F    V+  CA +  AR G+Q+ G+  K G      + N  I MY+  GD+  AR  F
Sbjct: 355 DEFIVSSVMGACADMAAARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTF 414

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
                 DVVSW+ +I     H    E++ LF  M  +G+  N  T++ VL AC+  G + 
Sbjct: 415 QETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVD 474

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
            G   +  +K+   +      S  ++D+  ++G +E A
Sbjct: 475 EGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEA 512


>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:45147837-45154874 | 20130731
          Length = 787

 Score =  348 bits (893), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 197/552 (35%), Positives = 284/552 (51%), Gaps = 25/552 (4%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYSLSSD-----------PTHHFHALSLFIF----- 88
           L  AR L    P  N+  +NTM+  Y+   D           P       +  +F     
Sbjct: 188 LGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQS 247

Query: 89  -ML---RRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALI 144
            ML   RR    +P      +  ++    + K     ++L   +     GS     N +I
Sbjct: 248 GMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGS----WNTII 303

Query: 145 HMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA 204
             Y   GD+  ARELFD M  RD VSW ++I G        + + +  +M   G  +N +
Sbjct: 304 SGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRS 363

Query: 205 TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
           T    L  CA   AL +G++VHG    K   +  C V  AL++MY K G I  A      
Sbjct: 364 TFCCALSTCAGMAALVLGKQVHGQAV-KTGYDNGCLVGNALLEMYCKCGSIGEAYDVFER 422

Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
                   W  M++G A HG  ++A+ +F  M+T   KPDE TM  VL AC +  L    
Sbjct: 423 MQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRG 482

Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
              F  M K YGI P  +H+ C++DLL RAG L+EA + M  MP +PDA  W  L+ A +
Sbjct: 483 TEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASR 542

Query: 385 VHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGS 444
           +H + E  E+  +    M  +++G Y+L SN+YA++GKW +  ++R  M + G+ K PG 
Sbjct: 543 IHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGY 602

Query: 445 SRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQ 504
           S +EV   +H+F +GD  HPE D I+  L+E+  K+K EG+   +  VL ++++EEK   
Sbjct: 603 SWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMKHEGHVSLVKLVLHDVEEEEKKRM 662

Query: 505 LLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHH 564
           L +HSEKLA+A+G++    G  IR++KNLR CEDCH  +K ISKI  R II+RD  RFH+
Sbjct: 663 LKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCEDCHNVIKYISKIVGRLIILRDSHRFHY 722

Query: 565 FKNGDCSCKDYW 576
              G CSC DYW
Sbjct: 723 VSEGICSCGDYW 734



 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 115/314 (36%), Gaps = 26/314 (8%)

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACA 214
           AR LFD MP +D VSW  ++ G V      EA  +F  M  +  +  N    V V     
Sbjct: 98  ARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYV----- 152

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
            +G L   R++     + + I   C     L+  Y K   +  A              W 
Sbjct: 153 QNGRLEEARRLFESKVDWELISWNC-----LMGGYVKRKMLGDARRLFDHMPVRNAISWN 207

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
            MISG A  G   +A  LF E        D  T TA++ A   + ++ EA  VF +M  +
Sbjct: 208 TMISGYARDGDLLQARRLFEESPV----RDVFTWTAMVFAYVQSGMLDEARRVFDEMPGK 263

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
             +   +   G V     +   +  A +   AMP + +   W T+I     + D  +A  
Sbjct: 264 REMAYNVMIAGYV-----QYKKMDMARELFEAMPCR-NVGSWNTIISGYGQNGDIAQARE 317

Query: 395 LMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG--LIKPPGSSRIEVDGA 452
           L      M   D  S+      YA  G +     +   M + G  L +      +     
Sbjct: 318 LFDM---MTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAG 374

Query: 453 LHEFVMGDYNHPEA 466
           +   V+G   H +A
Sbjct: 375 MAALVLGKQVHGQA 388


>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:3995998-3993764 | 20130731
          Length = 637

 Score =  348 bits (893), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 220/611 (36%), Positives = 316/611 (51%), Gaps = 78/611 (12%)

Query: 37  AALSPSGDLNYARLL--LTSNPALNSYYYNTMLRAYSLSSDPTHH--------------- 79
            AL P   L+   ++  L S+P  N +  N +L  Y   S P+H                
Sbjct: 34  TALRPGQQLHATAIVTGLISSP--NHFLRNALLHLYGSCSLPSHARKLFDEIPQSHKDSV 91

Query: 80  -----------FHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA--RQGKQLHG 126
                      F +L LFI M +     +P  D       L  CARL     + G Q+H 
Sbjct: 92  DYTALIRHCPPFESLKLFIQMRQ---FDLPL-DGVVMVCALNACARLGGGDTKVGSQMHV 147

Query: 127 FITKMGFGSDCYIMNALIHMYSVFGDLGVARE---------------------------- 158
            + K GF     + NAL+++Y  FG +G AR+                            
Sbjct: 148 GVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVES 207

Query: 159 ---LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACA 214
              LFD MP+R+ V+WT +I G V +    EA  L   M+   G  ++  T+ SVL AC+
Sbjct: 208 GRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACS 267

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
            SG + +GR VH    ++  ++    V T+L+DMYAK G I +A              W 
Sbjct: 268 QSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWN 327

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
           AM+ GLA HG+ K A+D+F  M    VKPD  T  A+LSAC ++ LV + +  F D++  
Sbjct: 328 AMLGGLAMHGMGKIAVDMFPSMVE-EVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPV 386

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
           Y I+P I+H+ C+V LL RAG L+EAE  +  M + P+ V+  +LI +C  H   +  E+
Sbjct: 387 YRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEK 446

Query: 395 LMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
           +M+  LEM   ++  +I+ SN+YA  GK      +R+++ K+G+ K PG S I VDG LH
Sbjct: 447 IMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLH 506

Query: 455 EFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLS-EVLLEIDD--------EEKATQL 505
           +F+ GD +H     I++KLDEM+ +L+  GY P  S +VL    +        EE    L
Sbjct: 507 QFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPNTSCQVLFGCSNRDDCSESLEEVEQVL 566

Query: 506 LHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHF 565
             HSEKLAL +GL+ T  GS + I KNLR C+DCH  +K+ SK+Y+R+I+VRDR RFH F
Sbjct: 567 FTHSEKLALCFGLMSTPSGSPLHIFKNLRICQDCHSAIKIASKVYKREIVVRDRYRFHSF 626

Query: 566 KNGDCSCKDYW 576
           K+G CSC DYW
Sbjct: 627 KHGSCSCSDYW 637



 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 42/319 (13%)

Query: 105 FPFVLKCCARLKLARQGKQLHG--FITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           F  +L+ C+R    R G+QLH    +T +    + ++ NAL+H+Y        AR+LFD 
Sbjct: 23  FRSLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDE 82

Query: 163 MPD--RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA--DSGA 218
           +P   +D V +T+LI     H  P E+++LF +M +  + ++   +V  L ACA    G 
Sbjct: 83  IPQSHKDSVDYTALIR----HCPPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGD 138

Query: 219 LSMGRKVH-------------------------GIVKEKKR----IECKCNVS-TALIDM 248
             +G ++H                         G+V E ++    IE +  VS +  ++ 
Sbjct: 139 TKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEG 198

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPDERT 307
             K   +ES               WT MI G   +G  KEA  L  EM   C  +    T
Sbjct: 199 LVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVT 258

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
           + +VLSAC  +  V     V     K  G++  +     +VD+ A+ G +  A     +M
Sbjct: 259 LCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM 318

Query: 368 PMKPDAVLWRTLIWACKVH 386
            +K + V W  ++    +H
Sbjct: 319 -LKRNVVAWNAMLGGLAMH 336


>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:5362710-5366096 | 20130731
          Length = 654

 Score =  348 bits (892), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 199/582 (34%), Positives = 322/582 (55%), Gaps = 18/582 (3%)

Query: 1   MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
           +E  ++S+ + +H +++  G+  +  P   +KL         G +++A  +         
Sbjct: 85  IEQNSLSDGVDVHHRLV--GSGLDQDPYLATKLINMYC--DLGSVDHACKVFDETREKTI 140

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA-- 118
           + +N + RA +++S          L +   +    G+P+ + FT+ +VLK C   +L+  
Sbjct: 141 FVWNAIFRALAMAS------RGEDLLVLYGQMNWIGIPS-NRFTYTYVLKACVVSELSIC 193

Query: 119 --RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID 176
             R+GK++H  I + G+    ++M  L+ +Y+ FG +  A  +F  MPD+++VSW+++I 
Sbjct: 194 PLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIA 253

Query: 177 GLVDHDRPVEAIELFG-RMLEAGVEV-NDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
               ++ P++A+ELF   MLEA   V N  T+VSVL+ACA   AL  G+ VH  V  ++ 
Sbjct: 254 CYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVL-RRG 312

Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
           ++    V   LI MY + G I +               W ++IS    HGL K+AI +F 
Sbjct: 313 LDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFE 372

Query: 295 EMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
            M    V P   T   VL AC +A LV EA ++F  M  +Y I P ++H+ C+VD+L RA
Sbjct: 373 NMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRA 432

Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS 414
             L EA + +  M  KP   +W +L+ +C++H + E AER      E+   ++G+Y+L S
Sbjct: 433 NRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLS 492

Query: 415 NVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLD 474
           ++YA    W++   VR+ +  +GL K P  S IEV   ++  V  +  +P+ + +   L 
Sbjct: 493 HIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLI 552

Query: 475 EMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLR 534
            ++ ++K +GY P+ + V  ++D+EEK   +L HS KLA+A+GLI TS+G  IRI  NLR
Sbjct: 553 TLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLR 612

Query: 535 SCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            CEDCH FMK +SK   R+I++RD  RFH FK+G CSC DYW
Sbjct: 613 LCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  112 bits (281), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 11/320 (3%)

Query: 98  PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
           P P   TF  ++  C        G  +H  +   G   D Y+   LI+MY   G +  A 
Sbjct: 70  PNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHAC 129

Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
           ++FD   ++ +  W ++   L    R  + + L+G+M   G+  N  T   VL+AC  S 
Sbjct: 130 KVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSE 189

Query: 218 ----ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
                L  G+++H  +  +   E   +V T L+D+YA+ G +  A              W
Sbjct: 190 LSICPLRKGKEIHAHIL-RHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSW 248

Query: 274 TAMISGLASHGLCKEAIDLF--LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
           +AMI+  A + +  +A++LF  + +E C+  P+  TM +VL AC +   +    +V + +
Sbjct: 249 SAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYV 308

Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
            +R G++ T+     ++ +  R G +   +   + M  K D + W +LI    +H   ++
Sbjct: 309 LRR-GLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK-KRDVISWNSLISIYGMHGLGKK 366

Query: 392 AERLMKQHLEMGVDDSGSYI 411
           A ++ +  +  GV  S SYI
Sbjct: 367 AIQIFENMINRGV--SPSYI 384


>Medtr2g035620.1 | PPR containing plant protein | HC |
           chr2:15068017-15065354 | 20130731
          Length = 887

 Score =  347 bits (889), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 193/538 (35%), Positives = 290/538 (53%), Gaps = 31/538 (5%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N M+  Y  +      + A+ LF+ M+     G+ +P++ T   VL  C R +     +
Sbjct: 357 WNAMIAGYVRNE---FDYEAIELFVEMVFEL--GL-SPNSVTLSSVLPACVRCESFLDKE 410

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
            +H  + K GF  D Y+ NAL+ MYS  G + +AR +F  M  +D+VSW ++I G V   
Sbjct: 411 GIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCG 470

Query: 183 RPVEAIELFGRMLEAGVE------------------VNDATVVSVLRACADSGALSMGRK 224
           R  +A+ L   M     E                   N  T+++VL  CA   AL  G++
Sbjct: 471 RHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKE 530

Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
           +H     K+ +     V +AL+DMYAK GC+  +              W  +I     HG
Sbjct: 531 IHAYAV-KQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHG 589

Query: 285 LCKEAIDLFLEM-----ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
             +EA+ LF  M         ++P+E T  A+ ++  ++ +V E   +F  MK ++GIEP
Sbjct: 590 KGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEP 649

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV-LWRTLIWACKVHEDTERAERLMKQ 398
           T  H+ C+VDLL R+G ++EA + +  MP     V  W +L+ ACK+H++ E  E   K 
Sbjct: 650 TSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKN 709

Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVM 458
              +  + +  Y+L SN+Y+S G W    +VR+ M +KG+ K PG S IE    +H+F+ 
Sbjct: 710 LFVLDPNVASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVRKEPGCSWIEHGDEVHKFLA 769

Query: 459 GDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGL 518
           GD +HP++  +   L+ +  ++KKEGY P  S VL  + +EEK T L  HSE+LA+A+GL
Sbjct: 770 GDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGL 829

Query: 519 IRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           + TS G+ IR+ KNLR C DCH   K ISKI  R+II+RD  RFHHF+NG CSC DYW
Sbjct: 830 LNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 887



 Score =  136 bits (342), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 172/384 (44%), Gaps = 21/384 (5%)

Query: 11  QLHAQILKLGTSNNDA-PRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
           QLHA + K G +   A P +F  ++        GD++ AR +       +   +N+M+ A
Sbjct: 106 QLHAHVFKFGQALPTAVPNSFVNMY-----GKCGDIDAARRVFDEITNRDDVSWNSMINA 160

Query: 70  YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL-KLARQGKQLHGFI 128
                     F    L + + R        P +FT   V   C+ L      GKQ+H F+
Sbjct: 161 AC-------RFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFV 213

Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
            + G     +  NAL+ MY+  G +  A+ LFD   D+D+VSW ++I  L  +DR  EA+
Sbjct: 214 LRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEAL 272

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
                ML++GV  N  T+ SVL AC+    L  G+++H  V     +     V  AL+DM
Sbjct: 273 LYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDM 332

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME-TCNVKPDERT 307
           Y      E                W AMI+G   +    EAI+LF+EM     + P+  T
Sbjct: 333 YCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVT 392

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
           +++VL AC   +   +   + S + K +G E        ++D+ +R G ++ A     +M
Sbjct: 393 LSSVLPACVRCESFLDKEGIHSCVVK-WGFEKDKYVQNALMDMYSRMGRIEIARSIFGSM 451

Query: 368 PMKPDAVLWRTLIWA---CKVHED 388
             K D V W T+I     C  H+D
Sbjct: 452 NRK-DIVSWNTMITGYVVCGRHDD 474



 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 10/271 (3%)

Query: 52  LTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKC 111
           + + P L S +  + LR+ + SS   H   A+S +  M+   T GVP PDNF FP VLK 
Sbjct: 42  VAAEPRLPSEWV-SHLRSQTQSSSTFHQ--AISTYTNMV---TAGVP-PDNFAFPAVLKA 94

Query: 112 CARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSW 171
            A ++    GKQLH  + K G      + N+ ++MY   GD+  AR +FD + +RD VSW
Sbjct: 95  TAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGDIDAARRVFDEITNRDDVSW 154

Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD-SGALSMGRKVHGIVK 230
            S+I+     +    A+ LF  ML   V     T+VSV  AC++    L +G++VH  V 
Sbjct: 155 NSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVL 214

Query: 231 EKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI 290
                + +   + AL+ MYAK G +  A              W  +IS L+ +   +EA+
Sbjct: 215 RNG--DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEAL 272

Query: 291 DLFLEMETCNVKPDERTMTAVLSACRNADLV 321
                M    V+P+  T+ +VL AC + +++
Sbjct: 273 LYLHVMLQSGVRPNGVTLASVLPACSHLEML 303



 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 9/226 (3%)

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
           +AI  +  M+ AGV  ++    +VL+A A    L++G+++H  V +  +      V  + 
Sbjct: 68  QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQ-ALPTAVPNSF 126

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           ++MY K G I++A              W +MI+        + A+ LF  M   NV P  
Sbjct: 127 VNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186

Query: 306 RTMTAVLSACRN---ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
            T+ +V  AC N     L+ +    F     R G   T  +   +V + A+ G + EA+ 
Sbjct: 187 FTLVSVAHACSNLINGLLLGKQVHAFV---LRNGDWRTFTN-NALVTMYAKLGRVYEAKT 242

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
             +    K D V W T+I +   ++  E A   +   L+ GV  +G
Sbjct: 243 LFDVFDDK-DLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNG 287


>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:988953-991582 | 20130731
          Length = 838

 Score =  345 bits (886), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 202/565 (35%), Positives = 297/565 (52%), Gaps = 39/565 (6%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           GD+   R +       N   YNT++  Y        H  A  + + +      G   PD 
Sbjct: 282 GDMYAVREIFDEFSDKNLVMYNTIMSNY------VQHGLAGEVLVVLDEMLQKG-QRPDK 334

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY----------SVF-- 150
            T    +  CA+L     GK  H ++ + G      I NA+I MY           VF  
Sbjct: 335 VTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDS 394

Query: 151 -------------------GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
                              G+L +A  +F  MP+ ++VSW ++I  +V      EAI+L 
Sbjct: 395 MSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLL 454

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
             M   G++ +  T+V +  AC   GAL + + ++  + EK  I     + TAL+DM+++
Sbjct: 455 REMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYI-EKNDIHIDMQLGTALVDMFSR 513

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
            G   +A              WTA I   A  G  K AI+LF EM   +VK D+    A+
Sbjct: 514 CGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVAL 573

Query: 312 LSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
           L+A  +   V +   +F  M+K +G+ P I H+GC+VDLL RAG L+EA D M +MP+KP
Sbjct: 574 LTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKP 633

Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRE 431
           + V+W + + AC+ H++ E A    ++  ++  +  G ++L SN+YAS GKW++ A VR 
Sbjct: 634 NDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRL 693

Query: 432 LMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSE 491
            M +KG  K  GSS IEV G + EF  GD +H E   I + L E+  ++ + GY P  + 
Sbjct: 694 QMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTN 753

Query: 492 VLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQ 551
           VL+++D++EK   L  HSEKLA+AYGLI T +G  IR+VKNLR C DCH F KL+SK+Y 
Sbjct: 754 VLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYG 813

Query: 552 RDIIVRDRIRFHHFKNGDCSCKDYW 576
           R+I VRD  R+H FK G CSC+D+W
Sbjct: 814 REITVRDNNRYHFFKEGFCSCRDFW 838



 Score =  166 bits (421), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 192/405 (47%), Gaps = 28/405 (6%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAA-LSPSGDLNYARLLLTSNPALNSYYY 63
           T+ E  QLH  +LK G  N       +KL      +     LNYA      +       Y
Sbjct: 44  TLIELKQLHCNMLKKGVFN------INKLIAACVQMGTHESLNYALNAFKEDEGTKCSLY 97

Query: 64  --NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
             NT++R Y+ S          ++FI++      G+  PDNFTFPF+L  C+++    +G
Sbjct: 98  TCNTLIRGYAASG-----LCKEAIFIYLHMIIVMGI-VPDNFTFPFLLSACSKIMAFSEG 151

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
            Q+HG + KMG   D ++ N+LIH Y+  G + + R++FD M +R+VVSWTSLI+G    
Sbjct: 152 VQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVV 211

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
           +   EA+ LF  M+E GVE N  T+V  + ACA    L +G+KV  ++ E   ++    V
Sbjct: 212 NMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELG-VKSNTLV 270

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
             AL+DMY K G + +               +  ++S    HGL  E + +  EM     
Sbjct: 271 VNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQ 330

Query: 302 KPDERTMTAVLSACRN-ADL----VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
           +PD+ TM + ++AC    DL       AY VF     R G+E        ++D+  + G 
Sbjct: 331 RPDKVTMLSTIAACAQLGDLSVGKSSHAY-VF-----RNGLERLDNISNAIIDMYMKCGK 384

Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
            + A    ++M  K   V W +LI       + E A R+  +  E
Sbjct: 385 REAACKVFDSMSNKT-VVTWNSLIAGLVRDGELELALRIFGEMPE 428



 Score =  132 bits (332), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 192/439 (43%), Gaps = 55/439 (12%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           ++   SE +Q+H  ++K+G   +    N S +  +AA    G ++  R +       N  
Sbjct: 144 KIMAFSEGVQVHGVVVKMGLVKDLFVAN-SLIHFYAA---CGKVDLGRKVFDEMLERNVV 199

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            + +++  YS+ +       A+ LF  M+         P+  T    +  CA+LK    G
Sbjct: 200 SWTSLINGYSVVNMAKE---AVCLFFEMVEVGVE----PNPVTMVCAISACAKLKDLELG 252

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           K++   +T++G  S+  ++NAL+ MY   GD+   RE+FD   D+++V + +++   V H
Sbjct: 253 KKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQH 312

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
               E + +   ML+ G   +  T++S + ACA  G LS+G+  H  V  +  +E   N+
Sbjct: 313 GLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVF-RNGLERLDNI 371

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG----------------- 284
           S A+IDMY K G  E+A              W ++I+GL   G                 
Sbjct: 372 SNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNL 431

Query: 285 --------------LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
                         + +EAIDL  EM+   +K D  TM  + SAC     +  A  +++ 
Sbjct: 432 VSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTY 491

Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM-----KPDAVLWRTLIWACKV 385
           ++K   I   +Q    +VD+ +R G      D +NAM +     K D   W   I    V
Sbjct: 492 IEKN-DIHIDMQLGTALVDMFSRCG------DPLNAMRVFENMEKRDVSAWTAAIRVKAV 544

Query: 386 HEDTERAERLMKQHLEMGV 404
             + + A  L  + L+  V
Sbjct: 545 EGNAKGAIELFDEMLKQDV 563


>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:50487581-50485585 | 20130731
          Length = 630

 Score =  345 bits (886), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 195/564 (34%), Positives = 302/564 (53%), Gaps = 12/564 (2%)

Query: 13  HAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSL 72
           HAQ + +G   +    N          S    ++ AR++    P  +   +NTM+ A + 
Sbjct: 79  HAQFILVGFETDILTSNM----LINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTR 134

Query: 73  SSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMG 132
            +       AL LFI MLR  T      + FT   VL  CA      +  QLH F  K+ 
Sbjct: 135 IAKEQE---ALMLFIQMLREGT----LFNEFTISSVLCECAFKCAILECMQLHAFSIKVS 187

Query: 133 FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
             S+C++  AL+H+Y+    +  A ++F+ MP+ + V+W+S++ G V +     A+ LF 
Sbjct: 188 VDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFR 247

Query: 193 RMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS 252
                G E +   + S + ACA    L  G++VH I   K        V+++LIDMYAK 
Sbjct: 248 DYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAI-SCKSGFGSNIYVTSSLIDMYAKC 306

Query: 253 GCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL 312
           GCI  A              W AMISG   H    EA+ LF +M+   + PD+ T  +VL
Sbjct: 307 GCIREAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVL 366

Query: 313 SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD 372
           +AC +  L  + +  F  M + + + P++ H+ C+VD+L RAG + +A D +  MP    
Sbjct: 367 NACSHMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFSAT 426

Query: 373 AVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVREL 432
           + +W +L+ +C++H + E AE   K   EM  D++G+++L +N+YA+  KW   A+ R+L
Sbjct: 427 SSIWGSLLASCRIHGNIEFAEIAAKHLFEMEPDNAGNHVLLANIYAANKKWEEVAKTRKL 486

Query: 433 MNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEV 492
           +    L K  G+S IE+   +H F +G+ NHP  + I+ KLD +V++L+K  Y    +  
Sbjct: 487 LRDSELKKDRGTSWIEIKNKIHSFTVGERNHPLINEIYAKLDSLVEELEKLNYKVDTNND 546

Query: 493 LLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQR 552
           L ++++ +K   L HHSEKLA+ +GL+       IRI+KNLR C DCH FMK + K   R
Sbjct: 547 LHDVEESKKQMLLRHHSEKLAITFGLMCLPSNIPIRIMKNLRICGDCHNFMKFVCKSTSR 606

Query: 553 DIIVRDRIRFHHFKNGDCSCKDYW 576
           +II+RD  RFHHFK+G CSC D+W
Sbjct: 607 EIIIRDTNRFHHFKDGLCSCGDFW 630



 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 4/335 (1%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           +L+ CA+ + +  G+  H     +GF +D    N LI+MYS    +  AR +FD MP + 
Sbjct: 62  ILQLCAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKS 121

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
           VVSW ++I  L    +  EA+ LF +ML  G   N+ T+ SVL  CA   A+    ++H 
Sbjct: 122 VVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQLHA 181

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
               K  ++  C V TAL+ +YAK   I+ A              W+++++G   +GL +
Sbjct: 182 F-SIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHE 240

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
            A+ LF + +    + D   +++ + AC     + E   V + +  + G    I     +
Sbjct: 241 AALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHA-ISCKSGFGSNIYVTSSL 299

Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV-DD 406
           +D+ A+ GC++EA        ++   VLW  +I     H     A  L ++  + G+  D
Sbjct: 300 IDMYAKCGCIREAYIVFQGEELR-SIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPD 358

Query: 407 SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
             +Y+   N  + +G      +  +LM ++  ++P
Sbjct: 359 DVTYVSVLNACSHMGLHEQGHKYFDLMVREHNLRP 393


>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
           20130731
          Length = 719

 Score =  343 bits (879), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 198/567 (34%), Positives = 312/567 (55%), Gaps = 16/567 (2%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
           +HA ++  G  ++   +N       A  +  G +  AR++           +  ++  Y 
Sbjct: 167 VHAHVIVYGFGSHVFVQNG----LVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYG 222

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
            + +P   + AL +F  M +        PD  +   V++    +    QG+ LHG I KM
Sbjct: 223 QNGEP---WEALRMFDQMRKTDV----KPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKM 275

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRM--PDRDVVSWTSLIDGLVDHDRPVEAIE 189
           G   +  ++ +L   Y+  G++ VA+  FD+M  P++ V+ W ++I G   +    EA+E
Sbjct: 276 GLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNK-VMMWNAMISGYAKNGHAEEAVE 334

Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
           LF  M+   ++ +  T+ S + ACA  G+L + + +   V+ K +      V+T LIDMY
Sbjct: 335 LFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVR-KSKYGGDIFVNTTLIDMY 393

Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
           AK G +ESA              W+AMI G   HG   EAI L+  M+   V P++ T  
Sbjct: 394 AKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFI 453

Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
            +L+AC ++ L+++ + +F  M+  +GI+P  +H+ CVVDLL RAG LK+A  F+  MP+
Sbjct: 454 GLLTACSHSGLIKQGWELFHCMRD-FGIKPRNEHYSCVVDLLGRAGYLKQAYVFILKMPI 512

Query: 370 KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEV 429
           +P   +W  L+ ACK+H      E   ++   +   ++G Y+  SN+YAS   W   A +
Sbjct: 513 EPGVSVWGALLSACKIHRCVTLGEYAAQKLFSLDPYNTGHYVQLSNLYASSRMWDRVAYI 572

Query: 430 RELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKL 489
           R LM +KGL K  G S I+++  LH F  GD +HP+A  IF +L     +LK+ G+ P  
Sbjct: 573 RVLMKEKGLTKYLGYSVIDINEKLHTFHAGDMSHPQAKEIFYELQRQERRLKEVGFVPHT 632

Query: 490 SEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKI 549
             VL +++ EEK   L  HSE++A+AYGLI T+  + +RI KNLR+C +CH  +KLISK+
Sbjct: 633 ESVLHDLNYEEKEENLCIHSERIAVAYGLISTAPRTTLRITKNLRACVNCHSAIKLISKL 692

Query: 550 YQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           ++R+IIVRD  RFHHFK+G CSC DYW
Sbjct: 693 FEREIIVRDANRFHHFKDGLCSCGDYW 719



 Score =  163 bits (413), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 198/403 (49%), Gaps = 17/403 (4%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           T ++   Q+H Q++  G  +N     F         S  G + YAR L    P  + + +
Sbjct: 58  THITHLYQVHNQLVLSGLQHN----RFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMW 113

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N ++R YS ++    + + + ++ +M     H    PD FTFP VLK C+ L        
Sbjct: 114 NAIIRTYSRNN---MYRNVIEMYRWMKWVGLH----PDKFTFPCVLKACSELLDFGLSCL 166

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +H  +   GFGS  ++ N L+ +Y+  G +G+AR +FDR+ DR +VSWT+++ G   +  
Sbjct: 167 VHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGE 226

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
           P EA+ +F +M +  V+ +  ++VSV+RA  D   L  GR +HG +  K  +E + ++  
Sbjct: 227 PWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCII-KMGLEEEPDLLI 285

Query: 244 ALIDMYAKSGCIESAXXXX-XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           +L   YAK G +  A               W AMISG A +G  +EA++LF  M + N+K
Sbjct: 286 SLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIK 345

Query: 303 PDERTM-TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           PD  T+ +AVL+  +   L    +M     K +YG +  +     ++D+ A+ G ++ A 
Sbjct: 346 PDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVN--TTLIDMYAKCGSVESAR 403

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
              +   +K D V+W  +I    +H     A  L     + GV
Sbjct: 404 LVFDRASVK-DVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGV 445


>Medtr1g103660.1 | PPR containing plant-like protein | HC |
           chr1:46920306-46922872 | 20130731
          Length = 684

 Score =  342 bits (877), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 186/480 (38%), Positives = 267/480 (55%), Gaps = 5/480 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++ TF   L  C  +     G+QLH FI + G+  D  + N LI  Y   GD+  A  +
Sbjct: 207 PNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMV 266

Query: 160 FDRMPDR-DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           F R+ +R +VVSW S++  LV +     A  +F ++ +  VE  D  + SVL ACA+ G 
Sbjct: 267 FSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQVRKE-VEPTDFMISSVLSACAELGG 325

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           L +GR VH +   K  ++    V +AL+D+Y K G IE+A              W AMI 
Sbjct: 326 LELGRSVHALAV-KACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIG 384

Query: 279 GLASHGLCKEAIDLFLEME--TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           G A  G    A+ LF EM   +  ++P   T+ ++LS C     V     +F  M+  YG
Sbjct: 385 GYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFESMRLNYG 444

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           IEP  +HF CVVDLL R+G +  A +F+  MP++P   +W  L+ AC++H  TE  +   
Sbjct: 445 IEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLGACRMHGKTELGKIAA 504

Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
           ++  E+   DSG++++ SN+ AS G+W     VR+ M   G+ K  G S I V   +H F
Sbjct: 505 EKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVF 564

Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAY 516
              D +H     I   L ++   +K+ GY P  +  L +++DEEKA+++ +HSEK+ALA+
Sbjct: 565 QAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAF 624

Query: 517 GLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           GLI   QG  IRI KNLR C DCH  +K IS+I  R+IIVRD  RFH FK+G CSCKDYW
Sbjct: 625 GLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 179/402 (44%), Gaps = 21/402 (5%)

Query: 50  LLLTSNPALNSYYYNTMLRAYSLSSDPTHH---FHALSLFIFMLRRPTHGVPAPDNFTFP 106
           LL ++   L+  +  T++   SL S   H+     AL  F  M R        P++FTFP
Sbjct: 57  LLNSAQHVLSFTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQ----PNDFTFP 112

Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
            V K  A +++   GKQ+HG   K G   D ++  +   MY   G  G A  +FD MP R
Sbjct: 113 CVFKASALMQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHR 172

Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
           ++ +W + I   V   R ++ I  F   L    E N  T  + L AC D   L++GR++H
Sbjct: 173 NLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLH 232

Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX-XXXXXXXXXXXWTAMISGLASHGL 285
             +      E   +V+  LID Y K G I SA               W +M++ L  +  
Sbjct: 233 AFIVRCGYKE-DVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHE 291

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
            + A  +FL++    V+P +  +++VLSAC     +     V + +  +  ++  I    
Sbjct: 292 EERACMVFLQVRK-EVEPTDFMISSVLSACAELGGLELGRSVHA-LAVKACVKDNIFVGS 349

Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD 405
            +VDL  + G ++ AE   + +P + + V W  +I       D + A RL +   EM + 
Sbjct: 350 ALVDLYGKCGSIENAEQVFSELP-ESNLVTWNAMIGGYAHQGDIDMALRLFE---EMTLG 405

Query: 406 DSG---SYI-LAS--NVYASVGKWSNKAEVRELMNKKGLIKP 441
             G   SY+ L S  +V + VG      ++ E M     I+P
Sbjct: 406 SRGIRPSYVTLVSILSVCSRVGAVERGIQIFESMRLNYGIEP 447



 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 17/280 (6%)

Query: 121 GKQLHGFITKMGFGS-DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
           G+ +H  I +        ++ N L++MYS    L  A+ +      R VV+WTSLI G V
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCV 84

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
            + R + A+  F  M    V+ ND T   V +A A       G+++HG+  +   I    
Sbjct: 85  HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIHGLALKGGMIY-DV 143

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
            V  +  DMY K+G    A              W A IS         + I  F E    
Sbjct: 144 FVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCV 203

Query: 300 NVKPDERTMTAVLSACRNADLVR-------EAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
           + +P+  T  A L+AC   D++R        A++V      R G +  +     ++D   
Sbjct: 204 HGEPNSITFCAFLNAC--VDMMRLNLGRQLHAFIV------RCGYKEDVSVANGLIDFYG 255

Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
           + G +  AE   + +  + + V W +++ A   + + ERA
Sbjct: 256 KCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERA 295


>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:32525227-32527614 | 20130731
          Length = 795

 Score =  341 bits (875), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 178/515 (34%), Positives = 280/515 (54%), Gaps = 40/515 (7%)

Query: 101 DNFTFPFVLKCCA----RLKLARQGKQLHGFITKMGFGSDCYIM----NALIHMYSVFGD 152
           D +T+  ++  C     ++ +   G+Q+HG+I +       + +    NALI  Y+ +  
Sbjct: 282 DEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDR 341

Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA------------------------- 187
           +  AR +FD+MP RD++SW +++ G V+  R  EA                         
Sbjct: 342 MIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQN 401

Query: 188 ------IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
                 ++LF +M   G+E  D      + AC+  G+L  G+++H  V      +   + 
Sbjct: 402 GFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGH-DSGLSA 460

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
             ALI MY++ G +ESA              W AMI+ LA HG   +AI+LF +M   ++
Sbjct: 461 GNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDI 520

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
            PD  T   +L+AC +A L++E    F  M  RYGI P   H+  ++DLL RAG   +A+
Sbjct: 521 LPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQ 580

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
             + +MP +  A +W  L+  C++H + E   +   + LE+     G+YI+ SN+YA++G
Sbjct: 581 SVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALG 640

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
           +W   A VR LM ++G+ K PG S +EV+  +H F++ D  HPE   ++  L ++V+++K
Sbjct: 641 QWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMK 700

Query: 482 KEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHE 541
           K GY P    VL +++ E K   L  HSEKLA+ YG+++   G+ IR+ KNLR C DCH 
Sbjct: 701 KLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHN 760

Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
             K ISK+ +R+I+VRDR RFHHFKNG+CSC +YW
Sbjct: 761 AFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 4/201 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P ++ F   +  C+ L     G+Q+H  + ++G  S     NALI MYS  G +  A  +
Sbjct: 421 PCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESV 480

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F  MP  D VSW ++I  L  H   V+AIELF +M++  +  +  T +++L AC  +G +
Sbjct: 481 FLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLI 540

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGC-IESAXXXXXXXXXXXXXXWTAMIS 278
             GR     +  +  I    +    LID+  ++G  +++               W A+++
Sbjct: 541 KEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLA 600

Query: 279 GLASHG---LCKEAIDLFLEM 296
           G   HG   L  +A D  LE+
Sbjct: 601 GCRIHGNMELGIQAADRLLEL 621



 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/373 (20%), Positives = 135/373 (36%), Gaps = 97/373 (26%)

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD--------------- 165
            + +H  I   GF  + +I+N LI++Y    ++  AR+LFD++P                
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 166 ------------------RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVV 207
                             RD VS+ ++I      +    A+ LF +M   G   +  T  
Sbjct: 84  SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFS 143

Query: 208 SVLRA---------------------------------------CADS------GALSMG 222
           SVL A                                       CA S        ++  
Sbjct: 144 SVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
           RKV     + +  E      T +I  Y ++  + +A              W AMISG   
Sbjct: 204 RKVFDETPKNQIYEPSW---TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVR 260

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG------ 336
            GL +EA D F  M +  ++ DE T T+++SAC + +   E   +F+  ++ +G      
Sbjct: 261 RGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCN---EKMGMFNCGRQVHGYILRTV 317

Query: 337 IEPTIQHF-----GCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
           +EP+  HF       ++    +   + EA    + MP++ D + W  ++      +  E 
Sbjct: 318 VEPS-HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSGYVNAQRIEE 375

Query: 392 AERLMKQHLEMGV 404
           A  +  +  E  V
Sbjct: 376 ANSIFSEMPERNV 388


>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:27881892-27885186 | 20130731
          Length = 684

 Score =  341 bits (874), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 189/511 (36%), Positives = 284/511 (55%), Gaps = 36/511 (7%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS----------V 149
           PD  T   VL     L+    GKQ+HG++ K+G  SD Y+++AL+ MY           V
Sbjct: 97  PDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRV 156

Query: 150 FGDL-------------GVAR--------ELFDRMP----DRDVVSWTSLIDGLVDHDRP 184
           F ++             G++R        ++F +      + +VV+WTS+I   V + + 
Sbjct: 157 FDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKD 216

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
           +EA+ELF  M   GVE N  T+ S++ AC +  AL+ G+++H     +K I     V +A
Sbjct: 217 MEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIH-CFSLRKGIFDDVYVGSA 275

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           LIDMYA  G I  +              W +++SG A HG  KE I++F  M     KPD
Sbjct: 276 LIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPD 335

Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
             T T+VLSAC    L  E +  F+ M K Y ++P ++H+ C+V LL+R G L+EA   +
Sbjct: 336 SITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSII 395

Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
             MP +PDA +W  L+ +C+VH +    E   ++   +  D+ G+YIL SN+YAS G W 
Sbjct: 396 KEMPFEPDACVWGALLSSCRVHHNLSLGEIAAEKLFVLEPDNPGNYILLSNIYASKGMWD 455

Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
            +  VR++M  KGL K PG S IE+   +H  V GD +HP+   I  K +++  ++K+ G
Sbjct: 456 EENRVRDMMKSKGLQKNPGCSWIEIGHRVHTLVSGDKSHPQMKEILEKSEKLSIEIKESG 515

Query: 485 YNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMK 544
             P    VL ++++++K   L  HSEKLA+  GLI TS G  ++++KNLR C+DCH  +K
Sbjct: 516 CLPMTKSVLQDVEEQDKEQILCGHSEKLAVVLGLINTSPGQPLQVIKNLRICDDCHAVIK 575

Query: 545 LISKIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
           +IS++  R+I VRD  RFHHFK G CSC D+
Sbjct: 576 VISRLEGREIFVRDTNRFHHFKEGVCSCADF 606



 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 6/209 (2%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDV----VSWTSLIDGLVDHDRPVEAIELF 191
           D  + +A+I  YS  G++  A+E+F  M    V    VSW  +I G  +     EA+ LF
Sbjct: 28  DVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDEAVRLF 87

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
             M+  G   + +TV  VL    +   + MG++VHG V  K  +E    V +AL+DMY +
Sbjct: 88  HEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVI-KLGLESDKYVVSALLDMYGR 146

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
            GC                    A ++GL+ +GL   A+D+F + +   ++ +  T T++
Sbjct: 147 CGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSI 206

Query: 312 LSACRNADLVREAYMVFSDMKKRYGIEPT 340
           +++C       EA  +F DM+   G+EP 
Sbjct: 207 IASCVQNGKDMEALELFRDMQAD-GVEPN 234


>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:38310385-38313323 | 20130731
          Length = 684

 Score =  341 bits (874), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 187/480 (38%), Positives = 266/480 (55%), Gaps = 5/480 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++ TF   L  C  +     G+QLH FI + G+  D  + N LI  Y   GD+  A  +
Sbjct: 207 PNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMV 266

Query: 160 FDRMPDR-DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           F+R+ +R +VVSW S++  LV +     A  +F +  +  VE  D  + SVL ACA+ G 
Sbjct: 267 FNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGG 325

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           L +GR VH +   K  +E    V +AL+DMY K G IE+A              W AMI 
Sbjct: 326 LELGRSVHALAV-KACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIG 384

Query: 279 GLASHGLCKEAIDLFLEME--TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           G A  G    A+ LF EM   +  ++P   T+ ++LS C     V     +F  M+  YG
Sbjct: 385 GYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYG 444

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           IEP  +HF CVVDLL R+G +  A +F+  M ++P   +W  L+ AC++H  TE  +   
Sbjct: 445 IEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAA 504

Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
           ++  E+   DSG++++ SN+ AS G+W     VR+ M   G+ K  G S I V   +H F
Sbjct: 505 EKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVF 564

Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAY 516
              D +H     I   L ++   +K+ GY P  +  L +++DEEKA+++ +HSEK+ALA+
Sbjct: 565 QAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAF 624

Query: 517 GLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           GLI   QG  IRI KNLR C DCH  +K IS+I  R+IIVRD  RFH FK+G CSCKDYW
Sbjct: 625 GLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 159/353 (45%), Gaps = 12/353 (3%)

Query: 50  LLLTSNPALNSYYYNTMLRAYSLSSDPTHH---FHALSLFIFMLRRPTHGVPAPDNFTFP 106
           LL ++   L+  +  T++   SL S   H+     AL  F  M R        P++FTFP
Sbjct: 57  LLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQ----PNDFTFP 112

Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
            V K  A +++   GKQ+HG   K G   D ++  +   MY   G  G A  +FD MP R
Sbjct: 113 CVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQR 172

Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
           ++ +W + I   V   R ++AI  F   L    E N  T  + L AC D   L++GR++H
Sbjct: 173 NLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLH 232

Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX-XXXXXXXXXXXWTAMISGLASHGL 285
             +      E   +V+  LID Y K G I SA               W +M++ L  +  
Sbjct: 233 AFIVRCGYKE-DVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHE 291

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
            + A  +FL+     V+P +  +++VLSAC     +     V + +  +  +E  I    
Sbjct: 292 EERACMVFLQARK-EVEPTDFMISSVLSACAELGGLELGRSVHA-LAVKACVEDNIFVGS 349

Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
            +VD+  + G ++ AE   + +P + + V W  +I       D + A RL ++
Sbjct: 350 ALVDMYGKCGSIENAEQVFSELPER-NLVTWNAMIGGYAHQGDIDMALRLFEE 401



 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 17/280 (6%)

Query: 121 GKQLHGFITKMGFGS-DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
           G+ +H  I +        ++ N L++MYS    L  A+ +      R VV+WTSLI G V
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
            + R + A+  F  M    V+ ND T   V +A A       G+++HG+  +   I    
Sbjct: 85  HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIY-DV 143

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
            V  +  DMY K+G    A              W A IS         +AI  F E    
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203

Query: 300 NVKPDERTMTAVLSACRNADLVR-------EAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
           + +P+  T  A L+AC   D+VR        A++V      R G +  +     ++D   
Sbjct: 204 HGEPNSITFCAFLNAC--VDMVRLNLGRQLHAFIV------RCGYKEDVSVANGLIDFYG 255

Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
           + G +  AE   N +  + + V W +++ A   + + ERA
Sbjct: 256 KCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERA 295


>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:34908078-34912174 | 20130731
          Length = 1099

 Score =  340 bits (873), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/567 (35%), Positives = 305/567 (53%), Gaps = 22/567 (3%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSYYYNTML 67
           +H  +LK G          S +F   AL    S  G L  A+++       +   +N+++
Sbjct: 244 IHLHVLKHGLD--------SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
            AY  ++DP+    AL  F  M      G   PD  T   +    ++L   R  + + GF
Sbjct: 296 AAYEQNNDPST---ALRFFKGM----QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGF 348

Query: 128 ITKMGF-GSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
           + +  +   D  I NAL++MY+  G +  A  +FD++P +D +SW +L+ G   +    E
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408

Query: 187 AIELFGRMLEAGVEV-NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
           AI+ +  M E    + N  T VS++ A +  GAL  G K+H  +  K  +     V+T L
Sbjct: 409 AIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLI-KNSLYLDVFVATCL 467

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           ID+Y K G +E A              W A+I+ L  HG  +EA+ LF +M    VK D 
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADH 527

Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
            T  ++LSAC ++ LV E    F  M+K YGI+P+++H+GC+VDLL RAG L++A + + 
Sbjct: 528 ITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVR 587

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
            MP++PDA +W  L+ ACK++ + E       + LE+  ++ G Y+L SN+YA+  KW  
Sbjct: 588 NMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEG 647

Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
             +VR L   +GL K PG S + V      F  G+  HP+   I+ +L  +  K+K  GY
Sbjct: 648 VIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGY 707

Query: 486 NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKL 545
            P  S V  +I+++EK   L  HSE+LA+A+G+I T   S IRI KNLR C DCH   K 
Sbjct: 708 VPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKY 767

Query: 546 ISKIYQRDIIVRDRIRFHHFKNGDCSC 572
           IS+I +R+I+VRD  RFHHFK+G CSC
Sbjct: 768 ISRISEREIVVRDSNRFHHFKDGICSC 794



 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 198/444 (44%), Gaps = 23/444 (5%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALN 59
            ++ +  ++H  + K+G  ++        +F  A+L    S  G L+ A  +    P  +
Sbjct: 135 VSLVDGKKVHCCVFKMGFEDD--------VFVAASLVHLYSRYGVLDVAHKVFVDMPVKD 186

Query: 60  SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
              +N M+  +  + +       L+      R    GV   D  T   +L  CA+     
Sbjct: 187 VGSWNAMISGFCQNGNAAGALGVLN------RMKGEGVKM-DTITVASILPVCAQSDDVI 239

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
            G  +H  + K G  SD ++ NALI+MYS FG L  A+ +FD+M  RD+VSW S+I    
Sbjct: 240 NGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYE 299

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
            ++ P  A+  F  M   G+  +  TVVS+    +      + R + G V  ++ ++   
Sbjct: 300 QNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDV 359

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
            +  AL++MYAK G +  A              W  +++G   +GL  EAID +  ME C
Sbjct: 360 VIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEEC 419

Query: 300 -NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
            +  P++ T  +++ A  +   +++   + + + K   +   +    C++DL  + G L+
Sbjct: 420 RDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLE 478

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVY 417
           +A      +P +  +V W  +I +  +H   E A +L K  L   V  D  +++   +  
Sbjct: 479 DAMSLFYEIP-RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSAC 537

Query: 418 ASVGKWSNKAEVRELMNKKGLIKP 441
           +  G      +  ++M K+  IKP
Sbjct: 538 SHSGLVDEGQKCFDIMQKEYGIKP 561



 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 172/370 (46%), Gaps = 12/370 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           +LHA +L  G S N      +KL         GD++ +R         N + +N+++ AY
Sbjct: 40  KLHALLLVFGKSQNIVLS--TKLINLYV--THGDISLSRSTFDYIHKKNIFSWNSIISAY 95

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
                   +  A++    +      G   PD +TFP +LK C  L     GK++H  + K
Sbjct: 96  VRFGK---YHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFK 149

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           MGF  D ++  +L+H+YS +G L VA ++F  MP +DV SW ++I G   +     A+ +
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
             RM   GV+++  TV S+L  CA S  +  G  +H  V  K  ++    VS ALI+MY+
Sbjct: 210 LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL-KHGLDSDVFVSNALINMYS 268

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           K G ++ A              W ++I+    +     A+  F  M+   ++PD  T+ +
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           + S        R +  +   + +R  ++  +     +V++ A+ G +  A    + +P K
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK 388

Query: 371 PDAVLWRTLI 380
            D + W TL+
Sbjct: 389 -DTISWNTLV 397



 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 10/280 (3%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           K+LH  +   G   +  +   LI++Y   GD+ ++R  FD +  +++ SW S+I   V  
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 182 DRPVEAI----ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
            +  EA+    +LF       +  +  T   +L+AC    +L  G+KVH  V  K   E 
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCV-FKMGFED 154

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
              V+ +L+ +Y++ G ++ A              W AMISG   +G    A+ +   M+
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMK 214

Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
              VK D  T+ ++L  C  +D V    ++   + K +G++  +     ++++ ++ G L
Sbjct: 215 GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK-HGLDSDVFVSNALINMYSKFGRL 273

Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
           ++A+   + M ++ D V W ++I A + + D   A R  K
Sbjct: 274 QDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFK 312


>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:21517672-21518970 | 20130731
          Length = 432

 Score =  338 bits (868), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 177/433 (40%), Positives = 261/433 (60%), Gaps = 3/433 (0%)

Query: 146 MYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDAT 205
           MY+  G +  AR +F+ +P+RDVVS T++I G        EA+ELF R+   G++ N  T
Sbjct: 1   MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60

Query: 206 VVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX 265
              VL A +   AL +G++VH  V  +  I     +  +LIDMY+K G +  +       
Sbjct: 61  YTGVLTALSGLAALDLGKQVHNHVL-RSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM 119

Query: 266 XXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREA 324
                  W AM+ G + HG  +E + LF  M E   VKPD  T+ AVLS C +  L  + 
Sbjct: 120 YERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKG 179

Query: 325 YMVFSDMKK-RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
             +F+DM   +  +EP ++H+GCVVDLL R+G ++EA +F+  MP +P A +W +L+ AC
Sbjct: 180 LNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 239

Query: 384 KVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPG 443
           +VH + +  E   +Q LE+   ++G+Y++ SN+YAS G+W + + +R+LM KK + K PG
Sbjct: 240 RVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPG 299

Query: 444 SSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKAT 503
            S IE+D  LH F   D +HP  + I +K+ E+    K+ GY P LS VL ++D+E+K  
Sbjct: 300 RSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEK 359

Query: 504 QLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFH 563
            LL HSEKLAL++GLI +     IR++KNLR C DCH F K ISK+Y R++ +RD+ RFH
Sbjct: 360 ILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFH 419

Query: 564 HFKNGDCSCKDYW 576
               G CSC+DYW
Sbjct: 420 RIVGGKCSCEDYW 432



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 8/180 (4%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNF-TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIM 140
           AL LF     R   G     N+ T+  VL   + L     GKQ+H  + +    S   + 
Sbjct: 42  ALELF-----RRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQ 96

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGV 199
           N+LI MYS  G+L  +R +FD M +R V+SW +++ G   H    E ++LF  M  E  V
Sbjct: 97  NSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKV 156

Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKK-RIECKCNVSTALIDMYAKSGCIESA 258
           + +  T+++VL  C+  G    G  +   +   K  +E K      ++D+  +SG +E A
Sbjct: 157 KPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEA 216


>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
            chr3:9292413-9288471 | 20130731
          Length = 1125

 Score =  336 bits (861), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 179/521 (34%), Positives = 276/521 (52%), Gaps = 7/521 (1%)

Query: 56   PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
            P  +   +N ++  ++   DP     A +L    +RR   G+ +        +  C +  
Sbjct: 612  PERDVVTWNALIGGHADDKDPNATIQAFNL----MRRE--GLLSNYITIVNLLGTCMSPD 665

Query: 116  KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI 175
             L + G  +H  I   GF  D Y+ ++LI MY+  GDL  +  +FD + +++  +W ++ 
Sbjct: 666  YLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIF 725

Query: 176  DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
                 +    EA++   RM   GV+++  +    L    +   L  G+++H  +  K   
Sbjct: 726  SANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWII-KLGF 784

Query: 236  ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
            E    V  A +DMY K G I+                W  +IS LA HG  ++A + F E
Sbjct: 785  ELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHE 844

Query: 296  METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
            M    +KPD  T  ++LSAC +  LV E  + FS M   +G+   I+H  C++DLL R+G
Sbjct: 845  MLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSG 904

Query: 356  CLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASN 415
             L EAE F++ MP+ P+  +WR+L+ ACKVH + E   +   +  E+   D  +Y+L SN
Sbjct: 905  RLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSN 964

Query: 416  VYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDE 475
            V AS  +W +   VR+ M  + L K P  S I++   +  F MGD  HP++  I+ KL+E
Sbjct: 965  VCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEE 1024

Query: 476  MVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRS 535
            +    ++EG+ P  S  L + D+E+K   L +HSE++ALA+GLI +++GS +RI KNLR 
Sbjct: 1025 LRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRV 1084

Query: 536  CEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            C DCH   KL+SKI  R I+VRD  RFHHF  G CSC DYW
Sbjct: 1085 CGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 159/342 (46%), Gaps = 10/342 (2%)

Query: 40  SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
           S  G + YA+ +       N   +N M+  +        +  A+  F  M     +GV  
Sbjct: 193 SKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVG---WYHKAMQFFCHMFE---NGV-T 245

Query: 100 PDNFTFPFVLKCCARLKLARQG-KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
           P ++    ++  C R     +G +Q+HG++ K G  S+ ++  +L+H Y   G +  A +
Sbjct: 246 PSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANK 305

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           LF+ + + ++VSWTSL+    D+    E + ++  +   G+     T+ +V+R C   G 
Sbjct: 306 LFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGD 365

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
            +MG ++ G V +        +V+ +LI M+     +E A              W ++I+
Sbjct: 366 KTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIIT 425

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
             A +G  +E++  F  M   + K D  T++A+L AC +A  ++    +   + K  G+E
Sbjct: 426 ASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKS-GLE 484

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
             +     ++ + A+AG  ++AE   + MP + D + W +++
Sbjct: 485 SNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR-DLISWNSMM 525



 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 3/277 (1%)

Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
           F+ K  + +     GK LH    K     + +  N L++MYS FG +  A+ +FD+M DR
Sbjct: 152 FLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDR 211

Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG-RKV 225
           +  SW ++I G V      +A++ F  M E GV  +   + S++ AC  SG ++ G R++
Sbjct: 212 NDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQI 271

Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
           HG V  K  +     V T+L+  Y   G +  A              WT+++   A +G 
Sbjct: 272 HGYVV-KCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGH 330

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
            KE ++++  +    +     TM  V+  C         Y +  D+ K      ++    
Sbjct: 331 TKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVAN 390

Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
            ++ +      ++EA    N M  + D + W ++I A
Sbjct: 391 SLISMFGNYDSVEEASRVFNNMQER-DTISWNSIITA 426



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 143/350 (40%), Gaps = 11/350 (3%)

Query: 84  SLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNAL 143
           SL  F   R TH  P  D  T   +L  C   +  + G+ LHG ITK G  S+  + N+L
Sbjct: 436 SLGHFFWMRRTH--PKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSL 493

Query: 144 IHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVND 203
           + MY+  G    A  +F  MP RD++SW S++   V+  +   AI L   ML+    +N 
Sbjct: 494 LSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNY 553

Query: 204 ATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXX 263
            T  + L AC +   L +   VH  V     +     +   L+ MY K G ++ A     
Sbjct: 554 VTFTTALSACYNLEKLKI---VHAFVIHFA-VHHNLIIGNTLVTMYGKFGLMDEAQKVCK 609

Query: 264 XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVRE 323
                    W A+I G A        I  F  M    +  +  T+  +L  C + D + +
Sbjct: 610 IMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLK 669

Query: 324 AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
             M         G E        ++ + A+ G L  +    + +  K ++  W  +  A 
Sbjct: 670 HGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANK-NSSTWNAIFSAN 728

Query: 384 KVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVREL 432
             +   E A + + +    GVD D  S+ +A    A++G  +   E ++L
Sbjct: 729 AHYGPGEEALKFIARMRNDGVDLDQFSFSVA---LATIGNLTVLDEGQQL 775



 Score = 83.2 bits (204), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 21/300 (7%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           +   + +HA I+  G   +   +  S L T  A    GDLN +  +       NS  +N 
Sbjct: 668 LKHGMPIHAHIVVAGFELDTYVQ--SSLITMYA--QCGDLNTSSYIFDVLANKNSSTWNA 723

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           +  A +      H+        F+ R    GV   D F+F   L     L +  +G+QLH
Sbjct: 724 IFSANA------HYGPGEEALKFIARMRNDGVDL-DQFSFSVALATIGNLTVLDEGQQLH 776

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP---DRDVVSWTSLIDGLVDHD 182
            +I K+GF  D Y++NA + MY   G  G   ++F  +P    R   SW  LI  L  H 
Sbjct: 777 SWIIKLGFELDEYVLNATMDMY---GKCGEIDDVFRILPIPKIRSKRSWNILISALARHG 833

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              +A E F  ML+ G++ +  T VS+L AC+  G +  G      +  +  +       
Sbjct: 834 FFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHC 893

Query: 243 TALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISGLASHG---LCKEAIDLFLEMET 298
             +ID+  +SG + E+               W ++++    HG   L ++A D   E+ +
Sbjct: 894 VCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNS 953


>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38663296-38660628 | 20130731
          Length = 745

 Score =  335 bits (860), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 200/595 (33%), Positives = 317/595 (53%), Gaps = 35/595 (5%)

Query: 1   MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
           +   ++S   QLH+ I   G S++    N   L  F   S  G+LN A  L    P  N 
Sbjct: 83  IPTNSVSLGKQLHSLIFTSGCSSDKFISN--HLLNF--YSKFGELNNAVKLFDRMPRRNY 138

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA--------------------- 99
              N M++AY    +  +   A +LF  M  R      A                     
Sbjct: 139 MSCNIMIKAYLEMGNIEN---AKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRM 195

Query: 100 ------PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDL 153
                 PD ++F  VL+ CA L+    G+Q+H ++ K GF  +  +  +L HMY   G L
Sbjct: 196 NVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSL 255

Query: 154 GVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
                +   MP+ ++V+W +L+ G   +      ++ +  M  AG   +  T VSV+ +C
Sbjct: 256 CNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSC 315

Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
           ++   L  G+++H  V  K       +V ++L+ MY+K G ++ +              W
Sbjct: 316 SELATLCQGKQIHAEVI-KAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVIW 374

Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
           ++MI+    HG C++AI LF + E  N+  +E T  ++L AC ++ L  +    F  M +
Sbjct: 375 SSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVE 434

Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAE 393
           +YG++  ++H+ CVVDLL R+GCL+EAE  + +MP+  DA++W+TL+ ACK+H++ E A 
Sbjct: 435 KYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHKNEEMAR 494

Query: 394 RLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGAL 453
           R+ ++ L +   D  SY+L + ++AS  +W N +EVR  M  K + K PG S +EV   +
Sbjct: 495 RVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQV 554

Query: 454 HEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLA 513
           H+F  GD +HP+   I   L+E+  ++K +GY P +S VL ++D+EEK   L HHSEKLA
Sbjct: 555 HQFHTGDKSHPKFVEINQYLEELTSEMKMQGYVPDISSVLHDMDNEEKEYNLTHHSEKLA 614

Query: 514 LAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNG 568
           +A+ L+   +G  IR++KN+R C DCH  +K IS+I   +IIVRD  RFHHFKNG
Sbjct: 615 IAFALMTIPKGEPIRVMKNMRVCSDCHVAIKYISEIKNLEIIVRDSSRFHHFKNG 669



 Score =  109 bits (273), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 144/324 (44%), Gaps = 36/324 (11%)

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
           F  +++ C        GKQLH  I   G  SD +I N L++ YS FG+L  A +LFDRMP
Sbjct: 75  FSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 134

Query: 165 -------------------------------DRDVVSWTSLIDGLVDHDRPVEAIELFGR 193
                                          +R+V +W +++ GLV      EA+ LF R
Sbjct: 135 RRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSR 194

Query: 194 MLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG 253
           M   G   ++ +  SVLR CA   AL +G +VH  V  K   E    V  +L  MY K+G
Sbjct: 195 MNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVA-KCGFEFNSVVGCSLAHMYMKAG 253

Query: 254 CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
            + +               W  +++G A +   +  +D +  M+    +PD+ T  +V+S
Sbjct: 254 SLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVIS 313

Query: 314 ACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA-EDFMNAMPMKPD 372
           +C     + +   + +++ K  G    +     +V + ++ G L+++ + F+     + D
Sbjct: 314 SCSELATLCQGKQIHAEVIKA-GASSVVSVISSLVSMYSKCGSLQDSIKAFLEC--EERD 370

Query: 373 AVLWRTLIWACKVHEDTERAERLM 396
            V+W ++I A   H   E+A +L 
Sbjct: 371 VVIWSSMIAAYGFHGQCEKAIKLF 394


>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:27639852-27642151 | 20130731
          Length = 707

 Score =  334 bits (857), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 173/437 (39%), Positives = 270/437 (61%), Gaps = 3/437 (0%)

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
           N +I  + + G++  AR +F+ M +RD  +W ++I         +EA+ LF RM   GV 
Sbjct: 273 NEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVA 332

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
           +N  +++SVL  CA   +L  GR+VH  +  +   +    V++ LI MY K G +  A  
Sbjct: 333 LNFPSMISVLSVCASLASLDHGRQVHARLV-RSEFDQDLYVASVLITMYVKCGDLVRAKG 391

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W +MI+G + HGL +EA+++F +M +  V+PDE T   VLSAC  +  
Sbjct: 392 IFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGK 451

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           V+E + +F  MK  Y +EP I+H+ C+VDLL RAG + EA + +  MPM+PDA++W  L+
Sbjct: 452 VKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALL 511

Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
            AC+ H   + AE  +++  ++   ++G Y+L S++YA+ G+W +   +R+ +N++ +IK
Sbjct: 512 GACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR-VIK 570

Query: 441 PPGSSRIEVDGALHEFVMGDY-NHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDE 499
            PG S IEV+  +H F  GD  +HPE   I   L+++   L++ GY P  S VL ++D+E
Sbjct: 571 FPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEE 630

Query: 500 EKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDR 559
           EK   L +HSE+LA+AYGL++  +G  IR++KNLR C DCH  +KLI+K+  R+II+RD 
Sbjct: 631 EKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDA 690

Query: 560 IRFHHFKNGDCSCKDYW 576
            RFHHFK+G CSCKD+W
Sbjct: 691 NRFHHFKDGSCSCKDFW 707



 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 17/269 (6%)

Query: 42  SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
           +G+++ AR++       +   +N M++ +           AL LF  M R    GV    
Sbjct: 282 AGEMHRARMMFEGMKERDEGTWNAMIKVFERKG---LDLEALGLFARMQR---EGVA--- 332

Query: 102 NFTFPF---VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
              FP    VL  CA L     G+Q+H  + +  F  D Y+ + LI MY   GDL  A+ 
Sbjct: 333 -LNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKG 391

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           +F+R   +DVV W S+I G   H    EA+ +F  M  +GV+ ++ T + VL AC+ SG 
Sbjct: 392 IFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGK 451

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMI 277
           +  G ++   +K   ++E        ++D+  ++G ++ A               W A++
Sbjct: 452 VKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALL 511

Query: 278 SGLASH---GLCKEAIDLFLEMETCNVKP 303
               +H    L + A++   ++E  N  P
Sbjct: 512 GACRNHMKLDLAEVAVEKLAKLEPKNAGP 540



 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 124/307 (40%), Gaps = 12/307 (3%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D  ++  +I  Y   G L  ARELFD M  R+V +WT+++ G   + R    +++  ++ 
Sbjct: 175 DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGR----VDVARKLF 230

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
           E   E N+ +  ++L     SG +    ++   +  K  + C       +I  +  +G +
Sbjct: 231 EVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVAC-----NEMILQFGLAGEM 285

Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
             A              W AMI      GL  EA+ LF  M+   V  +  +M +VLS C
Sbjct: 286 HRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVC 345

Query: 316 RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
            +   +     V + +  R   +  +     ++ +  + G L  A+   N    K D V+
Sbjct: 346 ASLASLDHGRQVHARL-VRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFK-DVVM 403

Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVRELMN 434
           W ++I     H   E A  +       GV  D  ++I   +  +  GK     E+ E M 
Sbjct: 404 WNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMK 463

Query: 435 KKGLIKP 441
               ++P
Sbjct: 464 CTYQVEP 470



 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 13/195 (6%)

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
           N +I  Y   G +  AR++FD MP+R+VVSWTS++ G V      EA +LF  M    V 
Sbjct: 87  NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
                +  +L+      A    +K+  ++ EK  +     V T +I  Y + G ++ A  
Sbjct: 147 SWTVMIGGLLKESRIDDA----KKLFDMIPEKDVV-----VVTNMIGGYCQVGRLDEARE 197

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       WT M+SG A +G    A  LF  M   N    E + TA+L     +  
Sbjct: 198 LFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERN----EVSWTAMLMGYTQSGR 253

Query: 321 VREAYMVFSDMKKRY 335
           ++EA+ +F  M  ++
Sbjct: 254 MKEAFELFEAMPVKW 268



 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 51/260 (19%)

Query: 144 IHMYSVFGDLGVARELFDR--MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
           I  Y   GD+  AR++FD   +P R + SW +++    +  +P +A+ LF +M +     
Sbjct: 26  ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR---- 81

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           N  +   ++     +G ++  RKV  ++ E+  +       T+++  Y + G +E A   
Sbjct: 82  NTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSW-----TSMVRGYVQEGMVEEAEKL 136

Query: 262 XXXXXXXXXXXWTAMISGLASH--------------------------GLCK-----EAI 290
                      WT MI GL                             G C+     EA 
Sbjct: 137 FWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEAR 196

Query: 291 DLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDL 350
           +LF EM+  NV     T T ++S       V  A  +F  M +R  +  T    G     
Sbjct: 197 ELFDEMKVRNV----FTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMG----- 247

Query: 351 LARAGCLKEAEDFMNAMPMK 370
             ++G +KEA +   AMP+K
Sbjct: 248 YTQSGRMKEAFELFEAMPVK 267


>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
            chr4:46542320-46539266 | 20130731
          Length = 1017

 Score =  333 bits (854), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 204/569 (35%), Positives = 298/569 (52%), Gaps = 15/569 (2%)

Query: 11   QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
            Q+H +  K G   + +  N   L T  A + S  +N  + +    P  +   +N+ + A 
Sbjct: 461  QIHGEGFKWGLDLDVSVSN--ALLTLYAETDS--INECQKVFFQMPEYDQVSWNSFIGA- 515

Query: 71   SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
             L+        AL  F+ M++        P+  TF  +L   +   +   G Q+H  I K
Sbjct: 516  -LAKYEASVLQALKYFLEMMQAGWR----PNRVTFINILAAVSSFSVLGLGHQIHALILK 570

Query: 131  MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLVDHDRPVEAIE 189
                 D  I NAL+  Y     +     +F RM +R D VSW S+I G +      +A++
Sbjct: 571  YSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMD 630

Query: 190  LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
            L   M++ G +++  T  +VL ACA    L  G +VH     +  +E    V +AL+DMY
Sbjct: 631  LVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAV-RACLESDVVVGSALVDMY 689

Query: 250  AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
            AK G I+ A              W +MISG A HG  ++A+ +F  M+     PD  T  
Sbjct: 690  AKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFV 749

Query: 310  AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
             VLSAC +  LV E Y  F  M + YG+ P I+HF C+VDLL RAG +K+ EDF+  MPM
Sbjct: 750  GVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPM 809

Query: 370  KPDAVLWRTLIWAC--KVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
             P+ ++WRT++ AC      +TE  +R  K  +E+   ++ +Y+L SN++A+ G W +  
Sbjct: 810  DPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVV 869

Query: 428  EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
            E R  M K  + K  G S + +   +H FV GD  HPE + I+ KL E+++K++  GY P
Sbjct: 870  EARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVP 929

Query: 488  KLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLIS 547
            +    L +++ E K   L +HSEKLA+A+ L R S+   IRI+KNLR C DCH   K IS
Sbjct: 930  ETKYALYDLELENKEELLSYHSEKLAIAFVLTRKSE-LPIRIMKNLRVCGDCHTAFKYIS 988

Query: 548  KIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            KI  R II+RD  RFHHF  G CSC DYW
Sbjct: 989  KIVGRQIILRDSNRFHHFGGGMCSCGDYW 1017



 Score =  116 bits (290), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 156/350 (44%), Gaps = 17/350 (4%)

Query: 56  PALNSYYYNTMLRAYSLSSDPTHHFH-ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCAR 114
           P+ ++  +N+M+       D    F  A+S F  M R        P NF+    L  C+ 
Sbjct: 401 PSKDTVSWNSMISGL----DHNERFEEAVSCFHTMKRNGM----VPSNFSVISTLSSCSS 452

Query: 115 LKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSL 174
           L     G+Q+HG   K G   D  + NAL+ +Y+    +   +++F +MP+ D VSW S 
Sbjct: 453 LGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSF 512

Query: 175 IDGLVDHDRPV-EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
           I  L  ++  V +A++ F  M++AG   N  T +++L A +    L +G ++H ++  K 
Sbjct: 513 IGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALIL-KY 571

Query: 234 RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLASHGLCKEAIDL 292
            +     +  AL+  Y K   +E                 W +MISG    G+  +A+DL
Sbjct: 572 SVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDL 631

Query: 293 FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
              M     K D  T   VLSAC +   +     V +    R  +E  +     +VD+ A
Sbjct: 632 VWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHA-CAVRACLESDVVVGSALVDMYA 690

Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL---MKQH 399
           + G +  A  F   MP++ +   W ++I     H   ++A ++   MKQH
Sbjct: 691 KCGKIDYASRFFELMPVR-NIYSWNSMISGYARHGHGQKALKIFTRMKQH 739



 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 4/264 (1%)

Query: 119 RQGKQLHGFITKMGF-GSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
           R+G+++H ++ + G   +   I NAL++MY     +  A  +F  MP +D VSW S+I G
Sbjct: 355 RKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISG 414

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
           L  ++R  EA+  F  M   G+  ++ +V+S L +C+  G L++GR++HG    K  ++ 
Sbjct: 415 LDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHG-EGFKWGLDL 473

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH-GLCKEAIDLFLEM 296
             +VS AL+ +YA++  I                 W + I  LA +     +A+  FLEM
Sbjct: 474 DVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEM 533

Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
                +P+  T   +L+A  +  ++   + + + + K Y +         ++    +   
Sbjct: 534 MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILK-YSVADDNAIENALLAFYGKCEQ 592

Query: 357 LKEAEDFMNAMPMKPDAVLWRTLI 380
           +++ E   + M  + D V W ++I
Sbjct: 593 MEDCEIIFSRMSERRDEVSWNSMI 616



 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 13/209 (6%)

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
              LH  + K GF  D +  N LI++Y   G+L  AR+LFD MP +++VSW+ LI G   
Sbjct: 42  ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ 101

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA--LSMGRKVHGIVKEKKRIECK 238
           +  P EA  LF  ++ +G+  N   V S LRAC   G+  + +G ++H  +    ++ C 
Sbjct: 102 NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFI---CKLPCV 158

Query: 239 CN--VSTALIDMYAK-SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF-- 293
            +  +S  L+ MY+  SG I+ A              W ++IS     G    A  LF  
Sbjct: 159 SDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSV 218

Query: 294 LEMETC--NVKPDERTMTA-VLSACRNAD 319
           ++ME    N++P+E T+ + V +AC  AD
Sbjct: 219 MQMEGVELNLRPNEYTLCSLVTAACSLAD 247



 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 178/408 (43%), Gaps = 39/408 (9%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           +++ +A  LH Q+ K G +++    N + +  +  +   G+L  AR L    P  N   +
Sbjct: 37  SSLYDANHLHLQLYKTGFTDDVFFCN-TLINIYVRI---GNLVSARKLFDEMPQKNLVSW 92

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA--RQG 121
           + ++  Y+ +  P     A SLF  ++   + G+  P++F     L+ C +      + G
Sbjct: 93  SCLISGYTQNRMPDE---ACSLFKGVI---SSGL-LPNHFAVGSALRACQQCGSTGIKLG 145

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYS-VFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
            Q+H FI K+   SD  + N L+ MYS   G +  A  +FD +  R+ V+W S+I     
Sbjct: 146 MQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCR 205

Query: 181 HDRPVEAIELFGRMLEAGVEV----NDATVVSVLRAC---ADSGALSMGRKVHGIVKEKK 233
               V A +LF  M   GVE+    N+ T+ S++ A    AD G + + + +  I  EK 
Sbjct: 206 RGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRI--EKS 263

Query: 234 RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
                  V +AL++ +A+ G ++ A                 ++ GLA     +EA  +F
Sbjct: 264 GFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVF 323

Query: 294 LEMETCNVKPDERTMTAVLSACRNADLVRE---------AYMVFSDMKKRYGIEPTIQHF 344
            EM+   V+ +  ++  +LS       ++E         AY+  S +     ++  I   
Sbjct: 324 KEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGL-----VDARISIG 377

Query: 345 GCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
             +V++  +   +  A      MP K D V W ++I     +E  E A
Sbjct: 378 NALVNMYGKCTAIDNACSVFQLMPSK-DTVSWNSMISGLDHNERFEEA 424


>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
            chr6:10235820-10240817 | 20130731
          Length = 1144

 Score =  333 bits (854), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 187/545 (34%), Positives = 294/545 (53%), Gaps = 12/545 (2%)

Query: 11   QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
            Q+H Q+LK G   N     +         +  G L++A  +       +   +  M+  Y
Sbjct: 507  QIHTQVLKTGFQFN----VYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGY 562

Query: 71   SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
            +     T    AL+LF  M      G+ + DN  F   +  CA ++   QG+Q+H     
Sbjct: 563  TQHDKFTE---ALNLFKEM---QDQGIKS-DNIGFASAISACAGIQALDQGRQIHAQSCL 615

Query: 131  MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
             G+  D  I NAL+ +Y+  G +  A   FD++  +D VSW SL+ G        EA+ +
Sbjct: 616  SGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNI 675

Query: 191  FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
            F +M +AG+E+N  T  S + A A+   + +G+++HG+++ K   + +  VS ALI +YA
Sbjct: 676  FAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIR-KTGYDSETEVSNALITLYA 734

Query: 251  KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
            K G I+ A              W +MI+G + HG   EA+ LF +M+  +V P+  T   
Sbjct: 735  KCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVG 794

Query: 311  VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
            VLSAC +  LV E    F  M + + + P  +H+ CVVDLL R+G L  A+ F+  MP++
Sbjct: 795  VLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQ 854

Query: 371  PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
            PDA++WRTL+ AC VH++ +  E      LE+   DS +Y+L SN+YA  GKW  +   R
Sbjct: 855  PDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTR 914

Query: 431  ELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLS 490
            ++M  +G+ K PG S +EVD ++H F  GD NHP AD I+  L  +  +  + GY P+ +
Sbjct: 915  QMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCN 974

Query: 491  EVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIY 550
             +L + +  +K    + HSE+LA+A+GL+  +  + + + KNLR CEDCH ++K +SKI 
Sbjct: 975  SLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKIT 1034

Query: 551  QRDII 555
             R II
Sbjct: 1035 DRVII 1039



 Score =  150 bits (380), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 204/458 (44%), Gaps = 35/458 (7%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
           V  +    Q H+  +K G ++ D     S L  +   S   D+  A     +    N   
Sbjct: 398 VGALPNGKQFHSYAIKAGMTS-DIVVEGSLLDLYVKCS---DIKTAHEFFLACETENVVL 453

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N ML  Y    +    F   +      +    G+  P+ FT+P +LK C  L     G+
Sbjct: 454 WNVMLVGYGQLDNLNKSFQIFT------QMQIEGI-VPNQFTYPSILKTCTTLGATDLGE 506

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           Q+H  + K GF  + Y+ + LI MY+  G L  A ++F R+ + DVVSWT++I G   HD
Sbjct: 507 QIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHD 566

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
           +  EA+ LF  M + G++ ++    S + ACA   AL  GR++H         +   ++ 
Sbjct: 567 KFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSD-DLSIG 625

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
            AL+ +YA+ G +  A              W +++SG A  G  +EA+++F +M    ++
Sbjct: 626 NALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLE 685

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
            +  T  + +SA  N   VR    +   M ++ G +   +    ++ L A+ G + +AE 
Sbjct: 686 INSFTFGSAVSAAANIANVRIGKQIHG-MIRKTGYDSETEVSNALITLYAKCGTIDDAER 744

Query: 363 FMNAMPMKPDAVLWRTLIW----------ACKVHEDTERAERLMKQHLEMG--------- 403
               MP K + + W ++I           A K+ ED ++ + L      +G         
Sbjct: 745 HFFEMPDK-NEISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVG 803

Query: 404 -VDDSGSYILA-SNVYASVGKWSNKAEVRELMNKKGLI 439
            VD+  SY  + S  +  V K  + A V +L+ + GL+
Sbjct: 804 LVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLL 841



 Score =  130 bits (326), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 147/328 (44%), Gaps = 5/328 (1%)

Query: 94  THGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDL 153
           T G+  P  + F  VL  C +++    GKQLHG + K GF S+ Y+ NAL+ +YS  G+L
Sbjct: 277 TSGI-CPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNL 335

Query: 154 GVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
             A ++F  M  RD VS+ SLI GL        A+ LF +M     + +  TV S+L AC
Sbjct: 336 SSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSAC 395

Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
           A  GAL  G++ H     K  +     V  +L+D+Y K   I++A              W
Sbjct: 396 ASVGALPNGKQFHSYAI-KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLW 454

Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
             M+ G        ++  +F +M+   + P++ T  ++L  C           + + + K
Sbjct: 455 NVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLK 514

Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAE 393
             G +  +     ++D+ A+ G L  A      +  + D V W  +I     H+    A 
Sbjct: 515 T-GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQHDKFTEAL 572

Query: 394 RLMKQHLEMGVDDSGSYILASNVYASVG 421
            L K+  + G+  S +   AS + A  G
Sbjct: 573 NLFKEMQDQGI-KSDNIGFASAISACAG 599



 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 158/361 (43%), Gaps = 11/361 (3%)

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
           HGV A ++ TF ++L+ C   +    G +LHG I KMGF  +  +   LI  Y  FGDL 
Sbjct: 75  HGVRA-NSQTFLWLLEGCLNSRSFYDGLKLHGKILKMGFCDEVVLCERLIDFYLAFGDLN 133

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            A  +FD MP R +  W  + +  +          LF RML   VE ++     VLR C+
Sbjct: 134 CAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCS 193

Query: 215 DSG-ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
            +  +     ++H         E    +   LID+Y K+G + SA              W
Sbjct: 194 GNAVSFRFVEQIHAKTITSG-FESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSW 252

Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
            AMISGL+ +G  +EA+ LF +M T  + P     ++VLSAC   +       +   + K
Sbjct: 253 VAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLK 312

Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAE 393
           + G          +V L +R+G L  AE   + M  + D V + +LI          RA 
Sbjct: 313 Q-GFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQR-DRVSYNSLISGLAQQGYINRAL 370

Query: 394 RLMKQ-HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGA 452
            L K+ +L+    D  +     +  ASVG   N  +      K G+     +S I V+G+
Sbjct: 371 ALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM-----TSDIVVEGS 425

Query: 453 L 453
           L
Sbjct: 426 L 426



 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 172/378 (45%), Gaps = 23/378 (6%)

Query: 8   EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNP--ALNSY--YY 63
           + L+LH +ILK+G    D      +L  F      GDLN A  +    P  +L+ +   +
Sbjct: 99  DGLKLHGKILKMGFC--DEVVLCERLIDFYL--AFGDLNCAVNVFDEMPIRSLSCWNRIF 154

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA-RQGK 122
           NT +    +   P        LF  ML +        D   F  VL+ C+   ++ R  +
Sbjct: 155 NTFIAERLMGRVP-------GLFRRMLTKNVE----FDERIFAVVLRGCSGNAVSFRFVE 203

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           Q+H      GF S  +I N LI +Y   G L  A+++F+ +  RD VSW ++I GL  + 
Sbjct: 204 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 263

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              EA+ LF +M  +G+        SVL AC        G+++HG+V  K+    +  V 
Sbjct: 264 YEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVL-KQGFSSETYVC 322

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
            AL+ +Y++SG + SA              + ++ISGLA  G    A+ LF +M     K
Sbjct: 323 NALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQK 382

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PD  T+ ++LSAC +   +      F     + G+   I   G ++DL  +   +K A +
Sbjct: 383 PDCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 441

Query: 363 FMNAMPMKPDAVLWRTLI 380
           F  A   + + VLW  ++
Sbjct: 442 FFLACETE-NVVLWNVML 458


>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:43569310-43567382 | 20130731
          Length = 526

 Score =  332 bits (851), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 185/479 (38%), Positives = 265/479 (55%), Gaps = 66/479 (13%)

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVF------------------------------ 150
           G Q+HG + K GFGSD ++  +L+ MY                                 
Sbjct: 2   GMQVHGQVVKYGFGSDFHVQRSLVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYFK 61

Query: 151 -GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
            GD+  AR+LFDRMP +++V+W+++I+G + ++   +A+E+F  +++ G+  N+   VS 
Sbjct: 62  CGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLVANEVGAVS- 120

Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNV--STALIDMYAKSGCIESAXXXXXXXXX 267
             ACA  GAL+ G K +   +   RI    NV   TA++DMYA+ G +E A         
Sbjct: 121 --ACAHLGALAAGEKAY---EHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKE 175

Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
                WT++ISG+A HG  +EA++ F  M    + P + T TAVL A  +  LV +   +
Sbjct: 176 KDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEI 235

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           F  MK+ Y +EP ++H+GC+VDLL RAG L+EAE+F+  MP+KP+A              
Sbjct: 236 FESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEMPIKPNA-------------- 281

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
                         M  + SG Y L SN+YA   KW +   +R LM +KG+ K PG S I
Sbjct: 282 -------------PMKPEHSGYYALLSNIYARTNKWKDATVMRRLMKEKGVRKQPGYSLI 328

Query: 448 EVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLH 507
           E+DG  HEF +G+  HPE D I    ++++ K+K  GY    SE L +ID+EEK   L  
Sbjct: 329 EIDGKTHEFTIGNKRHPEIDKIERMWEKILQKIKLAGYMGNTSEALFDIDEEEKEDALHR 388

Query: 508 HSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFK 566
           HSEKLA+AYG+++      IRIVKNLR CEDCH   K ISK++  ++IVRDR RFHHFK
Sbjct: 389 HSEKLAIAYGIMKIQAPGTIRIVKNLRVCEDCHTATKFISKVFDVELIVRDRNRFHHFK 447



 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 10/216 (4%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           GD++ AR L    P  N   ++TM+  Y  ++          + I        G+ A + 
Sbjct: 63  GDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILI------DEGLVANE- 115

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
                 +  CA L     G++ +    ++    +  +  A++ MY+  G++  A  +F+ 
Sbjct: 116 ---VGAVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEE 172

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M ++DV+SWTSLI G+  H    EA+E F  M++ G+   D T  +VL+A +  G +  G
Sbjct: 173 MKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKG 232

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           +++   +K   R+E +      ++D+  ++G +E A
Sbjct: 233 QEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEA 268


>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:50133605-50130067 | 20130731
          Length = 1017

 Score =  330 bits (847), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 185/507 (36%), Positives = 281/507 (55%), Gaps = 8/507 (1%)

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N ++  YS   D      A+SLF F L    H     +  T   VLK  A L+  +  KQ
Sbjct: 356 NALISGYSQCGDDEQ---AISLF-FELH---HENIDFNQTTLSTVLKSVASLQQIKVCKQ 408

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +H    K G  SD Y++N+L+  Y     +  A ++F+     D+V++TS+I     H  
Sbjct: 409 IHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGD 468

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             EA++L+ +M  A ++ +     S+L ACA+  A   G+++H +   K         S 
Sbjct: 469 AEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLH-VHAIKFGFMSDIFASN 527

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           +L++MYAK G IE A              W+AMI GLA HG  KEA+ +F +M    V P
Sbjct: 528 SLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSP 587

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           +  T+ +VL AC +A LV E    F  M++++GI+PT +H  C++DLL R+G L EA + 
Sbjct: 588 NHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVEL 647

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
           +N++P + D  +W  L+ A ++H++ E  E+  ++   +  D SG+ +L +N+YAS G W
Sbjct: 648 VNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMW 707

Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
            N A VR++M    + K PG S IEV   +H F++GD NH  +D IF KLDE+ + L K 
Sbjct: 708 ENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFIVGDRNHSRSDEIFAKLDELSELLSKA 767

Query: 484 GYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFM 543
           GY+P +   +  ++  EK   L HHSEKLA+A+GLI T  G+ IR+ KNLR C DCH F+
Sbjct: 768 GYSPIIETDIHNVERSEKEKLLYHHSEKLAVAFGLIVTPPGAPIRVKKNLRVCVDCHTFL 827

Query: 544 KLISKIYQRDIIVRDRIRFHHFKNGDC 570
           KL+SK+  R I++ +  +       DC
Sbjct: 828 KLVSKLVSRQIVIEEIGKEEKGNTQDC 854



 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 174/388 (44%), Gaps = 14/388 (3%)

Query: 10  LQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYA-RLLLTSNPALNSYYYNTMLR 68
           ++LH  ++K G S + + RN   L TF   S S    YA  LL  S        ++ ++ 
Sbjct: 1   MELHTHLIKFGFSRHSSLRN--HLLTF--YSNSRRFGYACNLLDQSTEPRTVVSWSALIS 56

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
            Y  +      FH  +L  F     T GV + + FTFP VLK C+  K    GK++H   
Sbjct: 57  RYVQNG-----FHKEALLAFN-EMCTLGVKS-NEFTFPTVLKACSIKKDLNMGKKVHAMT 109

Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
              GF SD ++ N L+ MY+  G    +++LF  + +  VVSW +L    V  D   E +
Sbjct: 110 VVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETV 169

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
           +LF RM+E  V  N+ ++  +L ACA      +GR VHG++ +      + + + AL+DM
Sbjct: 170 DLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFS-ANALVDM 228

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK+G IE A              W A+I+G   H     A+ L  EM+     P+  T+
Sbjct: 229 YAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTL 288

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
           ++ L AC    L      + S   K           G ++DL ++   + +A    + MP
Sbjct: 289 SSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVG-LIDLYSKCEMMDDARRAYDLMP 347

Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLM 396
            K   +    LI       D E+A  L 
Sbjct: 348 TKDHIIAGNALISGYSQCGDDEQAISLF 375



 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 10/285 (3%)

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD-RDVVSWTSLIDGLVDH 181
           +LH  + K GF     + N L+  YS     G A  L D+  + R VVSW++LI   V +
Sbjct: 2   ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
               EA+  F  M   GV+ N+ T  +VL+AC+    L+MG+KVH +       E    V
Sbjct: 62  GFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSG-FESDAFV 120

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
           S  L+ MYAK G    +              W A+ S         E +DLF  M    V
Sbjct: 121 SNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKV 180

Query: 302 KPDERTMTAVLSAC---RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
           +P+E +++ +L+AC   R+  + R  + +   MK  +G++    +   +VD+ A+AG ++
Sbjct: 181 RPNEYSLSIILNACAGLRDGGIGRTVHGLL--MKLGHGLDQFSAN--ALVDMYAKAGRIE 236

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +A D    M + PD V W  +I  C +HE  + A  L+ +  + G
Sbjct: 237 DAVDVFREM-IHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSG 280


>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:14398657-14402125 | 20130731
          Length = 960

 Score =  330 bits (845), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 182/508 (35%), Positives = 274/508 (53%), Gaps = 44/508 (8%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS----------VF 150
           D F  P +L  C+    A  G+ LHG+  K G GS   + NA+I MY+          VF
Sbjct: 378 DEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVF 437

Query: 151 ---------------------GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
                                GD+G AR  FD MP+R++V+W S++   V +    E ++
Sbjct: 438 RLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLK 497

Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA--LID 247
           L+  M   GV+ +  T  + +RACAD   + +G +V   V    +     NVS A  ++ 
Sbjct: 498 LYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQV---VTHATKFGLSLNVSVANSIVT 554

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY++ G I+ A              W AM++  A +GL  + ID F +M     KP+  +
Sbjct: 555 MYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHIS 614

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
             +VLS C +  LV E    F  M + +GI PT +HF C+VDLL RAG L++A+D +  M
Sbjct: 615 YVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGM 674

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
           P KP+A +W  L+ +C+VH D   AE   K+ +E+ V+ S  Y+L SN+Y+  G+  N A
Sbjct: 675 PFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVA 734

Query: 428 EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
           ++R+LM  KG+    G S IEVD  +H F + + +HP+   +++KL+EM+  ++  G   
Sbjct: 735 DMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTG--- 791

Query: 488 KLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLIS 547
           K   V   +   +K     +HSEKLA A+GL+       I ++KNLR C+DCH  +KL+S
Sbjct: 792 KYITVESSVHRSKK-----YHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLS 846

Query: 548 KIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
            +  R++I+RD  RFHHFK+G CSCKDY
Sbjct: 847 LVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  139 bits (349), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 168/390 (43%), Gaps = 43/390 (11%)

Query: 38  ALSPSGDLNYARLLLTSNPAL--NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
           AL  S  ++ A  L    P    +S  + TM+  YS +   +  F   SL   M+R    
Sbjct: 83  ALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL---MIRDTND 139

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
           G    D F+F  V+K C  L  +R   QLH  ++K+GFG +  I N+++ MY   GD+ +
Sbjct: 140 GGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDL 199

Query: 156 AR-------------------------------ELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           A                                ++F+RMP+RD VSW +LI     H   
Sbjct: 200 AETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFG 259

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV--S 242
           V+ + +F  M   G   N  T  SVL ACA +  L  G  +H  +    R+E   ++   
Sbjct: 260 VQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI---LRMEHSLDLVFG 316

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
             LIDMYAK GC++ A              W ++I+G+   GL ++A+ LF +M   +V 
Sbjct: 317 NGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVV 376

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
            DE  +  +L  C   D      ++     K  G+  +      ++ + A+ G   +A+ 
Sbjct: 377 LDEFILPTILGVCSGPDYASTGELLHGYTIKS-GMGSSAPVGNAIITMYAKCGDTDKADL 435

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
               MP++ + + W  +I A     D  +A
Sbjct: 436 VFRLMPLR-NTISWTAMITAFSRSGDIGKA 464



 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 174/432 (40%), Gaps = 68/432 (15%)

Query: 9   ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
           A+QLHA + KLG       +N             GD++ A  +       + + +N+M+ 
Sbjct: 165 AIQLHALVSKLGFGMETCIQNS----VVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIY 220

Query: 69  AYSLSSDPTHHFHALSLFIFMLRR------------PTHGVP---------------APD 101
            YS    P   + AL +F  M  R              HG                 +P+
Sbjct: 221 GYSQMYGP---YKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPN 277

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
             T+  VL  CA     + G  LH  I +M    D    N LI MY+  G L +A+ +F 
Sbjct: 278 FMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFK 337

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
            + + D +SW SLI G+V      +A+ LF +M  + V +++  + ++L  C+     S 
Sbjct: 338 SLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYAST 397

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
           G  +HG    K  +     V  A+I MYAK G  + A              WTAMI+  +
Sbjct: 398 GELLHGYTI-KSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFS 456

Query: 282 -------------------------------SHGLCKEAIDLFLEMETCNVKPDERTMTA 310
                                           +G  +E + L++ M +  V+PD  T T 
Sbjct: 457 RSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTT 516

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
            + AC +  +V+    V +   K +G+   +     +V + +R G +KEA++  +++  K
Sbjct: 517 SIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDK 575

Query: 371 PDAVLWRTLIWA 382
            D + W  ++ A
Sbjct: 576 -DLISWNAMLAA 586



 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 21/229 (9%)

Query: 37  AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
            A S SGD+  AR      P  N   +N+ML  Y  +         L L++ M    ++G
Sbjct: 453 TAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEE---GLKLYVSM---RSNG 506

Query: 97  VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
           V  PD  TF   ++ CA L + + G Q+    TK G   +  + N+++ MYS  G +  A
Sbjct: 507 VQ-PDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEA 565

Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
           +  FD + D+D++SW +++     +   ++ I+ F  ML+   + N  + VSVL  C+  
Sbjct: 566 KNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHM 625

Query: 217 GALSMGR-------KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           G ++ G+       +V GI    +   C       ++D+  ++G +E A
Sbjct: 626 GLVAEGKHYFDSMTRVFGISPTNEHFSC-------MVDLLGRAGLLEQA 667



 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 116/284 (40%), Gaps = 44/284 (15%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDR--DVVSWTSLIDGLVDHDRPVEAIELFGR 193
           + +  N +I        +  A +LFD MP R  D VSWT++I G   +     + E F  
Sbjct: 73  NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132

Query: 194 ML----EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
           M+    + G   +  +  SV++AC   G   +  ++H +V  K     +  +  +++ MY
Sbjct: 133 MIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALV-SKLGFGMETCIQNSVVGMY 191

Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISG------------------------------ 279
            K G ++ A              W +MI G                              
Sbjct: 192 VKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLIS 251

Query: 280 -LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGI 337
             + HG   + + +F+EM      P+  T  +VLSAC   +DL   A++    ++  + +
Sbjct: 252 IFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSL 311

Query: 338 EPTIQHFG-CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           +     FG  ++D+ A+ GCL  A+    ++  + D + W +LI
Sbjct: 312 DLV---FGNGLIDMYAKCGCLDLAKRVFKSLR-EHDHISWNSLI 351


>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:13515619-13513589 | 20130731
          Length = 676

 Score =  329 bits (844), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 180/478 (37%), Positives = 261/478 (54%), Gaps = 3/478 (0%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P+ +T   VL  C  L     GK +HG + K G  S      +L+ MYS    +  + ++
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKV 260

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+ +     V+WTS I GLV + R   A+ +F  M+   +  N  T  S+L AC+    L
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAML 320

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G ++H  V  K  ++    V  ALI +Y K G +E A                 MI  
Sbjct: 321 EAGEQIHA-VTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYA 379

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            A +G   EA++LF  M+    KP+  T  ++L AC NA LV E   +FS ++  + IE 
Sbjct: 380 YAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIEL 439

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
           T  H+ C++DLL RA   +EA   +      PD + WRTL+ ACK+H + E AE+ MK+ 
Sbjct: 440 TRDHYTCMIDLLGRAKRFEEAAMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           L+    D G++IL +N+YAS GKW N  E++       L K P  S +++D  +H F+ G
Sbjct: 499 LDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAG 558

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
           D +HP A  I   L E+++K+   GYNP    VL ++++E+K + L +HSEKLA+A+ L 
Sbjct: 559 DLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALW 618

Query: 520 RT-SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           +T  + + IRI KNLR C DCH ++K +S +  RDII RD  RFHHFK G CSCKDYW
Sbjct: 619 KTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676



 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 15/373 (4%)

Query: 48  ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
           AR L    P  +   +N+M+ ++ +S   T    A+ L+  ML     GV  PD +TF  
Sbjct: 54  ARKLFDEMPNRHIVTWNSMISSH-VSRGKTKE--AIELYDNMLFE---GV-LPDAYTFSA 106

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFG-SDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
           + K  + + ++R+G++ HG    +GF  SD ++   ++ MY+ FG +  AR +FDR+ D+
Sbjct: 107 IFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDK 166

Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
           DVV +T+LI G        EA+E+F  M+ + ++ N+ T+ SVL +C + G L  G+ +H
Sbjct: 167 DVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIH 226

Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
           G+V  K  +E      T+L+ MY+K   +E +              WT+ I GL  +G  
Sbjct: 227 GLVV-KSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGRE 285

Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
           + A+ +F EM  C++ P+  T +++L AC +  ++     + + +  + G++        
Sbjct: 286 EIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHA-VTVKLGVDGNKYVDAA 344

Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV----HEDTERAERLMKQHLEM 402
           ++ L  + G +++A     ++  + D V   T+I+A       HE  E  ER+ K   + 
Sbjct: 345 LIHLYGKCGNVEKARSVFESLT-ELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKP 403

Query: 403 GVDDSGSYILASN 415
            V    S +LA N
Sbjct: 404 NVVTFISILLACN 416



 Score =  102 bits (255), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 4/203 (1%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           ALS+F  M+R       +P++FTF  +L  C+ L +   G+Q+H    K+G   + Y+  
Sbjct: 288 ALSMFREMIRCSI----SPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDA 343

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
           ALIH+Y   G++  AR +F+ + + DVVS  ++I     +    EA+ELF RM + G + 
Sbjct: 344 ALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKP 403

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           N  T +S+L AC ++G +  G ++  +++    IE   +  T +ID+  ++   E A   
Sbjct: 404 NVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAML 463

Query: 262 XXXXXXXXXXXWTAMISGLASHG 284
                      W  +++    HG
Sbjct: 464 IEEGKNPDVIQWRTLLNACKIHG 486


>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:11323375-11320804 | 20130731
          Length = 724

 Score =  329 bits (844), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 183/484 (37%), Positives = 270/484 (55%), Gaps = 9/484 (1%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR--E 158
           D FT   VL     LK    G Q HG + K GF  + ++ + LI +YS     G+    +
Sbjct: 242 DMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMK 301

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVE-AIELFGRMLEAGVEVNDATVVSVLRACADSG 217
           +F+ +P  D+V W ++I G   H+   E A+  F  M   G   +D + V V+ AC++  
Sbjct: 302 VFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLS 361

Query: 218 ALSMGRKVHGIVKEKKRIEC-KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
           + S+G++VH +   K  I C + +V+ A + MY+K G +  A                +M
Sbjct: 362 SPSVGKQVHALAI-KSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSM 420

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           I+G A HG   E++ LF  M    + P+  T  +VLSAC +   V E    F+ MK+++G
Sbjct: 421 IAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFG 480

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           IEP  +H+ C++DLL RAG L +AE  +  MP  P ++ W  L+ ACK H + E A +  
Sbjct: 481 IEPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLGACKKHGNVELAVKAA 540

Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEF 456
            + L++   ++  Y++ SNVYAS  +W   A V+ LM ++G+ K PG S IE+D  +H F
Sbjct: 541 NKFLQLEPYNAAPYVMLSNVYASANRWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVF 600

Query: 457 VMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDD----EEKATQLLHHSEKL 512
           V  D +HP    I   + E++ KLK+ GY   +   L++ +D    EEK  +L HHSEKL
Sbjct: 601 VAEDTSHPRIKEIHTYMSELLMKLKQAGYVADIRLALVKDEDVIAIEEKERRLWHHSEKL 660

Query: 513 ALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSC 572
           A+A+ LI T +G+ I +VKNLR C DCH  +KLIS I  R+I VRD  RFH FK G CSC
Sbjct: 661 AIAFALISTEEGAPILVVKNLRICGDCHNAIKLISAISGREITVRDTHRFHCFKEGQCSC 720

Query: 573 KDYW 576
           +DYW
Sbjct: 721 RDYW 724



 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 13/303 (4%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           ++  +Q H +++K G   N    +   +  ++  +P G L   ++     P  +   +NT
Sbjct: 259 LAGGMQFHGKMIKSGFHRNSHVGS-GLIDLYSKCAPHGMLECMKVF-EEIPKPDLVLWNT 316

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           M+  +S   D      ALS F  M R        PD+ +F  V+  C+ L     GKQ+H
Sbjct: 317 MISGFSQHEDLCED--ALSSFREMQRVGF----CPDDCSFVCVISACSNLSSPSVGKQVH 370

Query: 126 GFITKMGFGSD-CYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
               K     +   + NA + MYS  G+L  AR +FD MP+++ VS  S+I G   H   
Sbjct: 371 ALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAE 430

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
           +E+++LF  ML+  +  N+ T +SVL ACA +G +  G K   ++KEK  IE +    + 
Sbjct: 431 IESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIEPEAEHYSC 490

Query: 245 LIDMYAKSGCIESAXXXXXXXXX-XXXXXWTAMISGLASHG---LCKEAIDLFLEMETCN 300
           +ID+  ++G +  A               W A++     HG   L  +A + FL++E  N
Sbjct: 491 MIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLGACKKHGNVELAVKAANKFLQLEPYN 550

Query: 301 VKP 303
             P
Sbjct: 551 AAP 553



 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 177/424 (41%), Gaps = 23/424 (5%)

Query: 27  PRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
           P  FS      A +     N A  L    P  +   YNT++  ++   +      A+S+F
Sbjct: 74  PNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQ---AVSVF 130

Query: 87  IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCY--IMNALI 144
               +         D FT   V+   A ++     +QLH F    G+  DCY  + NA++
Sbjct: 131 ----KEVREVGLVLDGFTLSGVIS--ASVEDVGLVRQLHCFALLCGY--DCYASVCNAVL 182

Query: 145 HMYSVFGDLGVARELFDRMPD--RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
             Y   G L  A  +F  M +  RD+VSW ++I     H    +A+ LFG M   G+EV+
Sbjct: 183 ACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVD 242

Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS---GCIESAX 259
             T+ SVL A      L+ G + HG +  K       +V + LID+Y+K    G +E   
Sbjct: 243 MFTMASVLTAFTCLKDLAGGMQFHGKMI-KSGFHRNSHVGSGLIDLYSKCAPHGMLE-CM 300

Query: 260 XXXXXXXXXXXXXWTAMISGLASH-GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
                        W  MISG + H  LC++A+  F EM+     PD+ +   V+SAC N 
Sbjct: 301 KVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNL 360

Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
                   V +   K       +      V + ++ G L +A    + MP + + V   +
Sbjct: 361 SSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMP-EQNTVSLNS 419

Query: 379 LIWACKVHEDTERAERLMKQHL-EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
           +I     H     + +L +  L E  V ++ ++I   +  A  GK     +   +M +K 
Sbjct: 420 MIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKF 479

Query: 438 LIKP 441
            I+P
Sbjct: 480 GIEP 483



 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 128/326 (39%), Gaps = 52/326 (15%)

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG--------- 154
           TF  +LK C   K    GK LH F  K       Y+ N    +YS FG            
Sbjct: 12  TFRTLLKQCITQKDFLTGKTLHAFYIKSFIPHSTYLSNHFTLLYSKFGTFSNALTAFHFT 71

Query: 155 ----------------------VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
                                 +A +LFD +P+ DVVS+ +LI          +A+ +F 
Sbjct: 72  GYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFK 131

Query: 193 RMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS 252
            + E G+ ++  T+  V+ A  +   + + R++H         +C  +V  A++  Y + 
Sbjct: 132 EVREVGLVLDGFTLSGVISASVED--VGLVRQLHCFALLCG-YDCYASVCNAVLACYGRL 188

Query: 253 GCIESA--XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           G +  A                W AMI     H    +A+ LF EME   ++ D  TM +
Sbjct: 189 GRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMAS 248

Query: 311 VLSA--CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG------CLKEAED 362
           VL+A  C   DL     M F     + G          ++DL ++        C+K  E+
Sbjct: 249 VLTAFTCLK-DLA--GGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEE 305

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHED 388
               +P KPD VLW T+I     HED
Sbjct: 306 ----IP-KPDLVLWNTMISGFSQHED 326


>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:30342642-30345393 | 20130731
          Length = 755

 Score =  329 bits (843), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 171/489 (34%), Positives = 271/489 (55%), Gaps = 17/489 (3%)

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD-- 161
           TF   L   + L L   G+QLHG +   G  SD YI ++L+ MY   G +  A  +    
Sbjct: 268 TFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDV 327

Query: 162 --------------RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVV 207
                         + P   +VSW+S++ G V + +  + ++ F  M+   + V+  TV 
Sbjct: 328 PLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVA 387

Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
           +++ ACA++G L  G+++H  + +K  +     V ++LIDMY+KSG ++ A         
Sbjct: 388 TIISACANAGILEFGKQIHAYI-QKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE 446

Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
                WT+MISG A HG  KEAI LF  M    + P+E T   VL+AC +  L+ E    
Sbjct: 447 PNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRY 506

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           F  MK  Y I P ++H+  +V+L  RAG L EA++F+    +     +WR+ + +C++H+
Sbjct: 507 FRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHK 566

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
           +    + + +  L+    D  +YIL SN+ +S  +W   A VR LM ++G+ K PG S +
Sbjct: 567 NFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWV 626

Query: 448 EVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLH 507
           ++   +H F +GD +HP+   I+  LD ++ +LK+ GY+     V+ ++++E+    + H
Sbjct: 627 QLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISH 686

Query: 508 HSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKN 567
           HSEKLAL + +I TS  + IRI+KNLR C DCH F K  S++ +R+IIVRD  RFHHFK 
Sbjct: 687 HSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQ 746

Query: 568 GDCSCKDYW 576
             CSC +YW
Sbjct: 747 SSCSCGEYW 755



 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/411 (22%), Positives = 176/411 (42%), Gaps = 58/411 (14%)

Query: 42  SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA-P 100
           S +L++A  L       N+  +  ++  ++ ++  +         +F L R      A P
Sbjct: 80  SSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSE-------LVFSLFREMQADGACP 132

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY----------SVF 150
           + +T   VLKCC+R    + GK +H +I + G G D  + N+++ +Y          S F
Sbjct: 133 NQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFF 192

Query: 151 ---------------------GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
                                GD+  + E+F   P++DVVSW ++IDGL+       A+E
Sbjct: 193 ELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALE 252

Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
               M+  G E +  T    L   +    + +GR++HG V     +     + ++L++MY
Sbjct: 253 QLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFG-LNSDGYIRSSLVEMY 311

Query: 250 AKSGCIESAXXXXX----------------XXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
            K G ++ A                              W++M+SG   +G  ++ +  F
Sbjct: 312 GKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTF 371

Query: 294 LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLAR 353
             M    +  D RT+  ++SAC NA ++     + + ++K  G+         ++D+ ++
Sbjct: 372 RSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK-IGLRIDAYVGSSLIDMYSK 430

Query: 354 AGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
           +G L +A      +  +P+ VLW ++I  C +H   + A  L +  L +G+
Sbjct: 431 SGSLDDALMIFEQIK-EPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGI 480



 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 2/173 (1%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           + LHG   K G        N L+ +Y    +L  A +LFD +  ++  +WT LI G    
Sbjct: 52  RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111

Query: 182 DRPVEAI-ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
               E +  LF  M   G   N  T+ SVL+ C+    +  G+ +H  +  +  +     
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWIL-RNGVGGDVV 170

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
           +  +++D+Y K    E A              W  MI      G  ++++++F
Sbjct: 171 LENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMF 223


>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:36572831-36570446 | 20130731
          Length = 700

 Score =  322 bits (826), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 174/460 (37%), Positives = 266/460 (57%), Gaps = 7/460 (1%)

Query: 121 GKQLHGFITKMGF--GSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
           G Q+H  + K GF  G D ++  +L+  Y+    +G A ++F     ++VV WT+L+ G 
Sbjct: 244 GIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGC 303

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH--GIVKEKKRIE 236
             +D+ VEA+E+F  M+   V  N+++  S L +C     L  GR +H  GI   K  +E
Sbjct: 304 GLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGI---KMGLE 360

Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
                  +L+ MY+K G I  A              W ++I G A HG    A+ LF EM
Sbjct: 361 NAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEM 420

Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
               V+ DE T+T +LSAC  + ++++A   F    ++  ++ T++H+ C+VD+L R G 
Sbjct: 421 LREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGE 480

Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNV 416
           ++EAE    +MP++ ++++W  L+ AC+VH   + AER  K+  EM  D S +Y+L SN+
Sbjct: 481 VEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNL 540

Query: 417 YASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM 476
           YAS  +W   A +R  M   G++K PGSS I + G  HEF+  D +HP  + I+ KL  +
Sbjct: 541 YASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWL 600

Query: 477 VDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSC 536
             KL++ GY P     L +++ E+    L +HSE+LA+A+GL+ T +GS I I+KNLR C
Sbjct: 601 GVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVC 660

Query: 537 EDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            DCH  + L++KI  R+I+VRD  RFHHFKNG CSC DYW
Sbjct: 661 GDCHTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 700



 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 79  HFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCY 138
           H  AL +F  M+R        P+  +F   L  C  L+   +G+ +H    KMG  +  Y
Sbjct: 309 HVEALEVFSEMMRFNV----VPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVY 364

Query: 139 IMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
             N+L+ MYS  G +G A  +F  + +++VVSW S+I G   H     A+ LF  ML  G
Sbjct: 365 TGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREG 424

Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           VE ++ T+  +L AC+ SG L   R   G    K+ ++        ++D+  + G +E A
Sbjct: 425 VESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEA 484



 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 6/274 (2%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D    NA+++ Y   G +  A  LF +MP RDV+SWTS+I GL  + +  +A+  F  M+
Sbjct: 157 DVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMV 216

Query: 196 E-AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALIDMYAKS 252
             +GV ++  T+V  L A A       G ++H  +  K    C  +  VS +L+  YA  
Sbjct: 217 GFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMF-KFGFCCGLDEFVSASLVTFYASC 275

Query: 253 GCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVL 312
             +  A              WTA+++G   +    EA+++F EM   NV P+E + T+ L
Sbjct: 276 KRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSAL 335

Query: 313 SACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD 372
           ++C   + + +  ++ +   K  G+E  +     +V + ++ G + +A      +  K +
Sbjct: 336 NSCVGLEDLEKGRVIHAAGIK-MGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEK-N 393

Query: 373 AVLWRTLIWACKVHEDTERAERLMKQHLEMGVDD 406
            V W ++I  C  H     A  L K+ L  GV+ 
Sbjct: 394 VVSWNSVIVGCAQHGCGTWALVLFKEMLREGVES 427


>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:8840204-8842727 | 20130731
          Length = 623

 Score =  322 bits (825), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 170/479 (35%), Positives = 268/479 (55%), Gaps = 4/479 (0%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           + FTF  V+  C   K   +G  +H    K+G   +  ++NAL++MY  FG +  A  LF
Sbjct: 146 NEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLF 205

Query: 161 DRMPD--RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
             MP+  + +VSW S++     +  P EA   F  M   G   +DAT+VS+L+AC +   
Sbjct: 206 SEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPL 265

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
             M   +HG++      E    + T L+++Y+K G + ++              WTAM++
Sbjct: 266 GRMVEVLHGVIFTCGLDE-NLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLA 324

Query: 279 GLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           G A HG  KEAI+ F  +     ++PD  T T +LSAC ++ LV+E    F  M   Y +
Sbjct: 325 GYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKV 384

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
           +P + H+ C+VDLL R G L +A + +  MP +P++ +W  L+ AC+VH + +  +   K
Sbjct: 385 QPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAK 444

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
             + +   D  +YI+ SN+Y++ G W++ ++VR LM  K L +  G S IE    +H FV
Sbjct: 445 NLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFV 504

Query: 458 MGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYG 517
           + DY HP++  I  KL+E++ K++  G+  +   +L ++D+E K   +  HSEK+ALAYG
Sbjct: 505 VDDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESILHDVDEEVKIDMITKHSEKIALAYG 564

Query: 518 LIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           L+ T+    + I+KNLR C DCH  +K +S + +R II+RD  RFH F  G CSC DYW
Sbjct: 565 LLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623



 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 22/288 (7%)

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +H  + K     D +I + L+  Y   G    A  LFD MP +D VSW SL+ GL    +
Sbjct: 67  IHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQ 126

Query: 184 PVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGALSMGRKVH------GIVKEKKRIE 236
             E + +F +M  ++ +++N+ T +SV+ AC    A   G  VH      G+V E K   
Sbjct: 127 LGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVK--- 183

Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXX--XXXXXXXWTAMISGLASHGLCKEAIDLFL 294
               V  AL++MY K G +ESA                W ++++  A +G+  EA + F 
Sbjct: 184 ----VVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFD 239

Query: 295 EMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
            M      PD+ TM ++L AC N  L R    V   +    G++  +     +++L ++ 
Sbjct: 240 MMRVNGFFPDDATMVSLLQACENFPLGRMVE-VLHGVIFTCGLDENLTIVTTLLNLYSKL 298

Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH----EDTERAERLMKQ 398
           G L  +      +  KPD V W  ++    +H    E  E  ER++++
Sbjct: 299 GRLNNSRKVFEEIS-KPDKVAWTAMLAGYAMHGCGKEAIEFFERIVRE 345


>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:26032045-26029503 | 20130731
          Length = 633

 Score =  322 bits (824), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 199/572 (34%), Positives = 300/572 (52%), Gaps = 24/572 (4%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLH+ ILK G+  +  P   S L    + +    L  AR +   +P   +  YN M+  Y
Sbjct: 80  QLHSHILKTGSQPD--PYTHSSLINMYSKTSLPCL--ARKVFDESPVNLTISYNAMISGY 135

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           +   +      A+ LF  ML      V +         +    +L+L   G  LHG   K
Sbjct: 136 T---NNMMIVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRL---GFCLHGCCFK 189

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
            GF +D  + N+ + MY   G++   R++FD +  +D+++W ++I G   +      +E+
Sbjct: 190 FGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEI 249

Query: 191 FGRMLE-AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALID 247
           +  M +  GV  +  T++ VL +CA+ GA  +GR+V    KE  R   + N  +  ALI+
Sbjct: 250 YREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVE---KEIDRFGFRSNSFLMNALIN 306

Query: 248 MYAKSGCIESAXXXX--XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           MYA+ G +  A                WTA+I G   HG  + A++LF  M    VKPD 
Sbjct: 307 MYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDR 366

Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
               +VLSAC +A L  +    F +M+++YG++P  +H+ C+VDLL R+G LKEA D ++
Sbjct: 367 TVFVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLID 426

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
            M +KPD  +W  L+ ACK+H + E AE   +  +E+   + G Y+L SN+Y+       
Sbjct: 427 LMKVKPDGPVWGALLGACKIHRNVELAEVAFQHVIELEPTNIGYYVLLSNLYSDTKNLEG 486

Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKK-EG 484
             +VR +M  + L K PG S +E  G +H F  GD +HP++  I+  L+E+ + +K   G
Sbjct: 487 VLKVRVMMRDRNLRKDPGCSYVEYKGKMHLFYSGDTSHPQSKEIYRMLNELENLVKDIHG 546

Query: 485 YNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMK 544
            + K      +   EE       HSEKLA+A+ L+ T  G+ I ++KNLR C DCH F K
Sbjct: 547 KDHK-----CQGKSEEPLIGAGVHSEKLAIAFALLNTKPGTDITVMKNLRVCVDCHVFFK 601

Query: 545 LISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           L+SKI  R  IVRD  RFH FKNG CSCKDYW
Sbjct: 602 LVSKIVDRQFIVRDATRFHRFKNGVCSCKDYW 633



 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 169/367 (46%), Gaps = 16/367 (4%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           AL+++  MLR        P+ FTFP +LK CA L L   G QLH  I K G   D Y  +
Sbjct: 43  ALTVYRHMLRSSFF----PNTFTFPVLLKSCALLSLPFTGSQLHSHILKTGSQPDPYTHS 98

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVE 200
           +LI+MYS      +AR++FD  P    +S+ ++I G  ++   VEAI+LF RML E    
Sbjct: 99  SLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFF 158

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
           VN  T++ ++        L +G  +HG    K   E   +V  + + MY K G +E    
Sbjct: 159 VNSVTMLGLVSGILVPEKLRLGFCLHGCCF-KFGFENDLSVGNSFLTMYVKCGEVEYGRK 217

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNAD 319
                       W AMISG A +G  +  ++++ EM +   V PD  T+  VL +C N  
Sbjct: 218 VFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLG 277

Query: 320 LVREAYMVFSDMKK---RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL- 375
               A  +  +++K   R+G          ++++ AR G L  A +  + M  +  +V+ 
Sbjct: 278 ----AQGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVS 333

Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVRELMN 434
           W  +I    +H + E A  L    +  GV  D   ++   +  +  G      E  + M 
Sbjct: 334 WTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDEME 393

Query: 435 KKGLIKP 441
           +K  ++P
Sbjct: 394 RKYGLQP 400


>Medtr3g109380.2 | PPR containing plant-like protein | HC |
           chr3:50595856-50594240 | 20130731
          Length = 538

 Score =  321 bits (823), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 182/500 (36%), Positives = 272/500 (54%), Gaps = 40/500 (8%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           +++  ++HA ++KL  S +    NF       +    G ++YA LL       N + YN 
Sbjct: 23  ITQLKKIHAHVVKLSLSQS----NFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNA 78

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           ++R Y+ +    HH  A+S+F+ ML   T+ V  PD FTFPFV+K C  +   R G Q+H
Sbjct: 79  IIRTYAHNR---HHSSAISVFVQMLTHSTNSV-FPDKFTFPFVIKSCTGILCHRLGMQVH 134

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDL-------------------------------G 154
           G + K G    C   NALI MY+ FGDL                                
Sbjct: 135 GLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMN 194

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            ARELFD MP R +VSWT++I G        +A+++F  M   G+E ++ ++++VL ACA
Sbjct: 195 SARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACA 254

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
             GAL +G+ +H +  +K     K  +  ALI+MYAK GCI+ A              W+
Sbjct: 255 QLGALEVGKWIH-MYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWS 313

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
            MI GLA+HG   EAI LF EM    V P+E T   VL AC +  L  E    F  M   
Sbjct: 314 TMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSAS 373

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
           Y IEP I+H+GC++DLL R+GCL +A D ++ MP+KPD+ +W +L+ +C++H + + A  
Sbjct: 374 YHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVI 433

Query: 395 LMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
            +KQ +E+  ++SG+Y+L +N+YA  GKW + + +R+L+  K + K PGSS IEV+  + 
Sbjct: 434 AVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQ 493

Query: 455 EFVMGDYNHPEADNIFVKLD 474
           EFV  D + P +  +F  L+
Sbjct: 494 EFVSSDDSKPFSQEVFWILE 513


>Medtr3g109380.1 | PPR containing plant-like protein | HC |
           chr3:50595856-50594240 | 20130731
          Length = 538

 Score =  321 bits (823), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 182/500 (36%), Positives = 272/500 (54%), Gaps = 40/500 (8%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           +++  ++HA ++KL  S +    NF       +    G ++YA LL       N + YN 
Sbjct: 23  ITQLKKIHAHVVKLSLSQS----NFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNA 78

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           ++R Y+ +    HH  A+S+F+ ML   T+ V  PD FTFPFV+K C  +   R G Q+H
Sbjct: 79  IIRTYAHNR---HHSSAISVFVQMLTHSTNSV-FPDKFTFPFVIKSCTGILCHRLGMQVH 134

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDL-------------------------------G 154
           G + K G    C   NALI MY+ FGDL                                
Sbjct: 135 GLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMN 194

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            ARELFD MP R +VSWT++I G        +A+++F  M   G+E ++ ++++VL ACA
Sbjct: 195 SARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACA 254

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
             GAL +G+ +H +  +K     K  +  ALI+MYAK GCI+ A              W+
Sbjct: 255 QLGALEVGKWIH-MYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWS 313

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR 334
            MI GLA+HG   EAI LF EM    V P+E T   VL AC +  L  E    F  M   
Sbjct: 314 TMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSAS 373

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
           Y IEP I+H+GC++DLL R+GCL +A D ++ MP+KPD+ +W +L+ +C++H + + A  
Sbjct: 374 YHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVI 433

Query: 395 LMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
            +KQ +E+  ++SG+Y+L +N+YA  GKW + + +R+L+  K + K PGSS IEV+  + 
Sbjct: 434 AVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQ 493

Query: 455 EFVMGDYNHPEADNIFVKLD 474
           EFV  D + P +  +F  L+
Sbjct: 494 EFVSSDDSKPFSQEVFWILE 513


>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:26513420-26510735 | 20130731
          Length = 659

 Score =  321 bits (822), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 162/419 (38%), Positives = 248/419 (59%), Gaps = 2/419 (0%)

Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
           ++F  +  ++++SW  +I   + +  P +A++L+ +M +  VE +  T  SVL AC D  
Sbjct: 243 KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLS 302

Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
           AL +GR++H  V EKK++     +  +LIDMYA+ GC++ A              WT++I
Sbjct: 303 ALLLGRRIHEYV-EKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLI 361

Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           S     G    A+ LF EM      PD     A+LSAC ++ L+ E  + F  M   Y I
Sbjct: 362 SAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRI 421

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
            P I+H+ C+VDLL RAG + EA + +  MP++P+  +W TL+ +C+V  + +       
Sbjct: 422 TPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAAD 481

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
             L++  + SG Y+L SN+YA  G+W    E+R +M +K + K PG S +E++  +H F+
Sbjct: 482 NLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFL 541

Query: 458 MGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYG 517
            GD +HP++  I+ +L  +V K+K+ GY P+    L ++++E+K   L  HSEKLA+ + 
Sbjct: 542 AGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFA 601

Query: 518 LIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           L+ T Q  +IRI KNLR C DCH   KLISKI +R+IIVRD  RFHHFK+G CSC DYW
Sbjct: 602 LLNT-QEYQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 170/373 (45%), Gaps = 49/373 (13%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLF-TFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
           +LH  I  L +  N  P    KL  ++AA    G+    R +       N  +YN M+R+
Sbjct: 39  KLHTMIFYLNSHQN--PSLGIKLMRSYAA---CGEPGLTRKVFDEMSDRNVVFYNVMIRS 93

Query: 70  YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
           Y       +H +   L +F  R   +G   PDN+T+P VLK C+  +  R G  +HG + 
Sbjct: 94  YV-----NNHRYDDGLLVF--REMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVL 146

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
           K+G   + ++ N LI MY   G L  AR +FD M  +DVVSW S++ G   + R  +A+E
Sbjct: 147 KVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALE 206

Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
           +   M + G + +  T+ S++ A A++ +                 E    V    +++ 
Sbjct: 207 ICREMEDYGQKPDGCTMASLMPAVANTSS-----------------ENVLYVEKIFVNLE 249

Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
            K+                    W  MI     + L  +A+DL+L+ME C V+PD  T  
Sbjct: 250 RKN-----------------LISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFA 292

Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
           +VL AC +   +     +   ++K+  + P +     ++D+ AR GCL +A+   + M  
Sbjct: 293 SVLPACGDLSALLLGRRIHEYVEKK-KLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKF 351

Query: 370 KPDAVLWRTLIWA 382
           + D   W +LI A
Sbjct: 352 R-DVASWTSLISA 363



 Score = 94.0 bits (232), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 145/328 (44%), Gaps = 30/328 (9%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           K+LH  I  +    +  +   L+  Y+  G+ G+ R++FD M DR+VV +  +I   V++
Sbjct: 38  KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
            R  + + +F  M+  G   ++ T   VL+AC+ S  L  G  +HG V  K  ++    V
Sbjct: 98  HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVL-KVGLDFNLFV 156

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
              LI MY K GC+  A              W +M++G A +    +A+++  EME    
Sbjct: 157 GNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQ 216

Query: 302 KPDERTMTAVLSACRNADLVREAYM--VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
           KPD  TM +++ A  N       Y+  +F +++++      +  +  ++ +  +     +
Sbjct: 217 KPDGCTMASLMPAVANTSSENVLYVEKIFVNLERK-----NLISWNVMIRVYMKNSLPTQ 271

Query: 360 AEDF---MNAMPMKPDAVLWRTLIWAC----------KVHEDTERAE---------RLMK 397
           A D    M    ++PDA+ + +++ AC          ++HE  E+ +          L+ 
Sbjct: 272 AVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLID 331

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSN 425
            +   G  D    +     +  V  W++
Sbjct: 332 MYARCGCLDDAKRVFDRMKFRDVASWTS 359


>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:10160876-10157214 | 20130731
          Length = 967

 Score =  320 bits (819), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 164/449 (36%), Positives = 262/449 (58%), Gaps = 5/449 (1%)

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEA 187
           G   D    N L+  YS+ G +  A  + +R+       +VVSWT+LI G   +++ ++A
Sbjct: 490 GITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDA 549

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           +++F +M    V+ N  T+ S+L ACA    L  G ++H    +   ++    V+TALID
Sbjct: 550 LKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVD-DIYVATALID 608

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY+++G ++ A              W  M+ G A H   +E + L+ +M   +++PD  T
Sbjct: 609 MYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAIT 668

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
            TA+LSAC+N+ LV E +  F  M++ Y I PTI+H+ C+VDLL ++G L EA  F+  M
Sbjct: 669 FTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETM 728

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
           P+KPDA +W  L+ +CK+H++ + AE   ++  +M  ++S +Y+L  N+Y+S+ +W    
Sbjct: 729 PIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRWVAVE 788

Query: 428 EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
            ++  M    +  PP  S  +V+ ++H F      HPE   I+ +L +++ +++K GY P
Sbjct: 789 RLKHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLISEIRKLGYAP 848

Query: 488 KLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLIS 547
            L+ V   IDD EK   L+ H+EKLA+ YG+++   GS IRIVKN R C DCH   K IS
Sbjct: 849 DLNCVCQNIDDNEKEKILMSHTEKLAMVYGVMKMKGGSPIRIVKNTRICFDCHTVAKYIS 908

Query: 548 KIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            + +R+I++RD  RFHHFKNG C+C D W
Sbjct: 909 LVRKREILLRDGGRFHHFKNGKCACNDRW 937



 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 179/426 (42%), Gaps = 63/426 (14%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
           ++ A  +    P    + +NT++ A +L S+   +  AL LF  M R            T
Sbjct: 205 IDKANQVFHETPYKEDFLWNTIVMA-NLRSERWKN--ALELFCDMQRDSAKATVG----T 257

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
              +L+ C +LK   +GKQLHG+  + G  S+  + N++I MYS      +AR +FD M 
Sbjct: 258 TVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSME 317

Query: 165 DR--------------------------------------DVVSWTSLIDGLVDHDRPVE 186
           D                                       D+++W S++ G +       
Sbjct: 318 DHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEM 377

Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
            +  F  +   G + +  +V S L+A  + G   +G+++HG +  +  +     V T+L+
Sbjct: 378 VLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIM-RSNLNYDVYVCTSLV 436

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
           DMY K+ C+E A              W ++ISG +  G   EA+ L  +M    + PD  
Sbjct: 437 DMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLV 496

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           T   ++S       + EA  + + +K   GI P +  +  ++     +GC  + E +M+A
Sbjct: 497 TWNGLVSGYSMQGRIDEALTIINRIKSS-GITPNVVSWTALI-----SGC-SQNEKYMDA 549

Query: 367 MPM---------KPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG-VDDSGSYILASNV 416
           + +         KP++    +L+ AC      ++ E L    +++G VDD        ++
Sbjct: 550 LKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDM 609

Query: 417 YASVGK 422
           Y+  GK
Sbjct: 610 YSEAGK 615



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 15/317 (4%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           E+ T++  ++LHAQI+K   + N A  + + +  +      GD   A  +     A N  
Sbjct: 63  ELRTLNSVMELHAQIIKTPKNYNFATIDGTMMRNYLEF---GDFLSAIKIFFVGFARNYL 119

Query: 62  YYNTMLRAY-SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
            +N+ L  + S   DP   F  L +F  M  +   GV   D+  F FVLK C  L+    
Sbjct: 120 LWNSFLEEFESFGGDP---FEILVVFNEMYSK---GVEF-DSKAFTFVLKICLALREFLF 172

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           G ++H  + K GF  D ++  ALI+ Y     +  A ++F   P ++   W +++   + 
Sbjct: 173 GLEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLR 232

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
            +R   A+ELF  M     +    T V +L+AC    AL+ G+++HG       +     
Sbjct: 233 SERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGKQLHGYALRFGLVS-NTL 291

Query: 241 VSTALIDMYAKSG--CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE-ME 297
           V  ++I MY+++    +  A              W ++I   A  G   +A+D     ME
Sbjct: 292 VCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGME 351

Query: 298 TCNVKPDERTMTAVLSA 314
              +KPD  T  ++LS 
Sbjct: 352 CSGIKPDIITWNSILSG 368



 Score = 86.3 bits (212), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 37/241 (15%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++ T   +L  CA   L ++G++LH F  K+GF  D Y+  ALI MYS  G L VA  +
Sbjct: 563 PNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNV 622

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+++ ++ +  W  ++ G   H    E + L+ +M E  +  +  T  ++L AC +SG +
Sbjct: 623 FNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLV 682

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G K    ++E   I         ++D+  KSG ++                       
Sbjct: 683 DEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDE---------------------- 720

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            ASH +           ET  +KPD     A+L++C+    ++ A +     +K + +EP
Sbjct: 721 -ASHFI-----------ETMPIKPDASIWGALLASCKIHKNIKLAEIA---ARKLFKMEP 765

Query: 340 T 340
            
Sbjct: 766 N 766



 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 87/230 (37%), Gaps = 3/230 (1%)

Query: 139 IMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD-RPVEAIELFGRMLEA 197
           I   ++  Y  FGD   A ++F     R+ + W S ++        P E + +F  M   
Sbjct: 89  IDGTMMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLEEFESFGGDPFEILVVFNEMYSK 148

Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
           GVE +      VL+ C        G +VH  +  KK      ++S ALI+ Y K   I+ 
Sbjct: 149 GVEFDSKAFTFVLKICLALREFLFGLEVHACLI-KKGFHVDVHLSCALINFYGKCWSIDK 207

Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
           A              W  ++         K A++LF +M+  + K    T   +L AC  
Sbjct: 208 ANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGK 267

Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
              + E   +      R+G+         ++ + +R    K A    ++M
Sbjct: 268 LKALNEGKQL-HGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSM 316


>Medtr4g108890.1 | PPR containing plant-like protein | HC |
           chr4:45133263-45138694 | 20130731
          Length = 548

 Score =  317 bits (813), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 181/532 (34%), Positives = 277/532 (52%), Gaps = 51/532 (9%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           T +  LQ+H Q++  G S+       +KL +F A   SG L +A  L        +  +N
Sbjct: 28  TETNILQIHTQVILNGLSHKH--NIIAKLLSFYA--ASGKLQHAHKLFIQIHNPKTTVWN 83

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
            M+RAY+ S  P       +  +            PD FT+ F+L  C R  L R+G+QL
Sbjct: 84  HMIRAYASSITPWKSVQYYNQMVL-------NACEPDGFTYSFLLSACVRGGLVREGEQL 136

Query: 125 HGFITKMGFGSDCYIMNALIHMYS----------VF---------------------GDL 153
           HG +   G+ SD ++   LI+ Y+          VF                     GD 
Sbjct: 137 HGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDF 196

Query: 154 GVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
             AR +F+ +P R+VVSWT++I G   + + VEA+ LFG+M  A VE++   +V+VL AC
Sbjct: 197 DAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSAC 256

Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
           A+ G L +GR +H  V+E++R +    ++ AL+ MYA  G I+ A              W
Sbjct: 257 AELGDLKLGRWIHWYVQERQR-QASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSW 315

Query: 274 TAMISGLASHGLCKEAIDLFLEMET-----CNVKPDERTMTAVLSACRNADLVREAYMVF 328
           T +I   A  GL KEA+DLF +M +       ++PD  T  A L AC +A  V E   +F
Sbjct: 316 TIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIF 375

Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
             M   + I   I+H+GC+VDLL+RAGCL EA   +  MP KP+  +W  L+  C++H++
Sbjct: 376 ESMIHTWRISLQIEHYGCMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKN 435

Query: 389 TERAERL---MKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
           +E A R+   +   L+     +G  +L SN+YA  G+W +   VR+ M + G+ KPPG S
Sbjct: 436 SELASRVANTLVAELDSTDQAAGYLVLLSNIYAFAGRWQDVIAVRQKMIEMGVKKPPGQS 495

Query: 446 RIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEID 497
            I++ G +H FV+GD  H  +  I+  L E+ ++ + EGY P ++EVLL+ +
Sbjct: 496 WIQIYGVVHNFVVGDMTHKHSSLIYETLCEITEQARVEGYKPDITEVLLDAE 547


>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:37579244-37581349 | 20130731
          Length = 701

 Score =  315 bits (808), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 171/453 (37%), Positives = 254/453 (56%), Gaps = 7/453 (1%)

Query: 127 FITKM---GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           F  KM   G   D   ++++++ Y   G +  AR +FD++  +D + WT++I G     R
Sbjct: 251 FFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGR 310

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             +A+ LF  ML   V  +  T+ +V+ +CA   +L  G+ VHG V     ++    VS+
Sbjct: 311 EEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMG-VDSNMLVSS 369

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           AL+DMY K G    A              W +MI G A +G  +EA+ L+  M   N KP
Sbjct: 370 ALVDMYCKCGVPLDARVIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKP 429

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           D  +   VLSAC N ++V+E    F  + ++ G+ PT+ H+ C++ LL R+G + +A D 
Sbjct: 430 DNISFVGVLSACINTNMVKEGRKHFDSISEQ-GMTPTLDHYACMIILLGRSGNIDKALDL 488

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
           +  MP KPD  +W  L+  C    D + AE       ++   ++GSYI+ SN+YA+ G+W
Sbjct: 489 IKGMPHKPDCRIWSALLSVCS-KGDIKTAEVAANHIFQLDPHNAGSYIMLSNLYAACGRW 547

Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
            + A VR LM  K   K    S +E+   +H FV  D+NHPE + I+ +L+ ++  L++ 
Sbjct: 548 KDVAVVRSLMKSKNAKKFSAYSWVEIGKKVHRFVSDDHNHPEMEKIYSELNRLIGILQQI 607

Query: 484 GYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSK-IRIVKNLRSCEDCHEF 542
           GYNP    VL  + +EEK   + HHSEKLALA+ LI+ S G+  IRI+KN+R C+DCHEF
Sbjct: 608 GYNPDTGIVLHNVGEEEKLRSISHHSEKLALAFSLIKKSNGAAPIRIIKNIRICDDCHEF 667

Query: 543 MKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDY 575
           MK  S    R II+RD  RFHHF  G CSCKD+
Sbjct: 668 MKFASIAITRPIIIRDSSRFHHFFGGKCSCKDH 700



 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 166/373 (44%), Gaps = 52/373 (13%)

Query: 33  LFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRR 92
           L  +A +    DLN   L+       +S  YNTM+  ++       ++ +     F +R 
Sbjct: 104 LSAYAKVGLVEDLN---LVFDRMACRDSVSYNTMIACFA------SNWLSGKALRFFVRM 154

Query: 93  PTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGD 152
              G   P  +++   L+ C++L   R GKQ+HG +    F  + ++ NA+  +Y+  GD
Sbjct: 155 QEDGF-RPTQYSYVNALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGD 213

Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRA 212
           +  AR LFD M ++++VSW  +I G V   +P E I  F +M  +G++ +  TV SVL A
Sbjct: 214 IDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNA 273

Query: 213 CADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
              SG +   R +   + +K  I                                     
Sbjct: 274 YFQSGRVDDARNMFDKIDKKDEI------------------------------------C 297

Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
           WT MI G A  G  ++A+ LF EM   NV+PD  T++ V+S+C     +     V   + 
Sbjct: 298 WTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKV- 356

Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
              G++  +     +VD+  + G   +A      MP+K + ++W ++I     + + E A
Sbjct: 357 ILMGVDSNMLVSSALVDMYCKCGVPLDARVIFETMPIK-NVIIWNSMILGYAQNGEAEEA 415

Query: 393 ----ERLMKQHLE 401
               ER+++++ +
Sbjct: 416 LTLYERMLQENFK 428



 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 160/363 (44%), Gaps = 24/363 (6%)

Query: 50  LLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVL 109
           LL T  PA +S Y   +L   + S+D        S     L +PT      D+F    +L
Sbjct: 21  LLFTRGPASSSDYTRLVLHC-AQSNDFNQAKRLQSHMELQLFQPT------DSFIHNQLL 73

Query: 110 KCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVV 169
              A+       +QL   ++K     D Y  NAL+  Y+  G +     +FDRM  RD V
Sbjct: 74  HLYAKCGKISDAQQLFDKMSK----RDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSV 129

Query: 170 SWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-- 227
           S+ ++I     +    +A+  F RM E G      + V+ L+AC+      +G+++HG  
Sbjct: 130 SYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRV 189

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
           +V E    E    V  A+ D+YAK G I+ A              W  MISG    G   
Sbjct: 190 VVGE---FEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPD 246

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
           E I  F +M+   +KPD+ T+++VL+A   +  V +A  +F  + K+  I  T    G  
Sbjct: 247 ECISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVG-- 304

Query: 348 VDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
               A++G  ++A    + M    ++PD+    T++ +C         + +  + + MGV
Sbjct: 305 ---YAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGV 361

Query: 405 DDS 407
           D +
Sbjct: 362 DSN 364



 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 123/283 (43%), Gaps = 42/283 (14%)

Query: 38  ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
           A   SG ++ AR +       +   + TM+  Y+ S        AL LF  MLR    G 
Sbjct: 273 AYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREED---ALMLFSEMLR----GN 325

Query: 98  PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
             PD+ T   V+  CA+L     G+ +HG +  MG  S+  + +AL+ MY   G    AR
Sbjct: 326 VRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDAR 385

Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
            +F+ MP ++V+ W S+I G   +    EA+ L+ RML+   + ++ + V VL AC ++ 
Sbjct: 386 VIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTN 445

Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
            +  GRK    + E+          T  +D YA                         MI
Sbjct: 446 MVKEGRKHFDSISEQGM--------TPTLDHYA------------------------CMI 473

Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
             L   G   +A+DL   M     KPD R  +A+LS C   D+
Sbjct: 474 ILLGRSGNIDKALDLIKGMPH---KPDCRIWSALLSVCSKGDI 513


>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:33294066-33291364 | 20130731
          Length = 814

 Score =  315 bits (808), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 173/477 (36%), Positives = 269/477 (56%), Gaps = 2/477 (0%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+ T   +++ C++      GK LH  I + G  S+  +  A++ MYS  G +  A ++F
Sbjct: 339 DSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVF 398

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
             M  R+V++WT+++ GL  +     A++LF RM E  V  N  T+VS++  CA  G+L 
Sbjct: 399 RTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLK 458

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISG 279
            GR VHG +          N+S ALIDMYAK G I SA                 +MI G
Sbjct: 459 KGRSVHGHLIRHGYEFNAVNMS-ALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMG 517

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
              HG   +A+ ++  M    +KP++ T  ++L+AC ++ LV E   +F  M++ + I+P
Sbjct: 518 YGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCMERVHNIKP 577

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
           + +H+ C VDLL+RAG L+EA   +  +P++P   +   L+  C++H++     ++  + 
Sbjct: 578 SDKHYACFVDLLSRAGYLEEAYALVKQIPVEPSIDVLEALLGGCRIHKNINMGIQIADRL 637

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           + +   ++G Y++ SN+Y+   +W +   +R LM K+GL K P  S  EV   +  F  G
Sbjct: 638 ISLDYLNTGIYVMLSNIYSEARRWESVNYIRGLMRKRGLKKTPAFSLTEVGNQVFTFFAG 697

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
           D +HP  +NI   L+ +  +++  GY    S VL ++++  K   L  HSE+LA+A+GL+
Sbjct: 698 DDSHPGWENIKQLLENLRLEVEASGYVADTSCVLRDVNETMKVQLLWGHSERLAIAFGLL 757

Query: 520 RTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            T  GS IRI KNLR C DCH   K ISKI +R+IIVRD  RFHHF NG+CSC DYW
Sbjct: 758 NTPYGSLIRITKNLRICVDCHTVTKYISKIVKREIIVRDANRFHHFVNGECSCNDYW 814



 Score =  153 bits (387), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 183/370 (49%), Gaps = 13/370 (3%)

Query: 27  PRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
           P   S +  F  L   G+LN AR++    P  +   +N+++  Y            + LF
Sbjct: 173 PHVGSSMINF--LVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKE---VIQLF 227

Query: 87  IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
           + M+   + G+  P + T   +LK C      + G  +H F+  +G G D +++ +L+ M
Sbjct: 228 VEMI---SCGIR-PSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDM 283

Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
           Y   GD   A  +F+RM  R ++SW ++I G V +    E+  LF +++++G   +  T+
Sbjct: 284 YCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTL 343

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
           VS++R C+ +  L  G+ +H  +  +K +E    +STA++DMY+K G I+ A        
Sbjct: 344 VSLIRGCSQTSDLENGKVLHACII-RKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTME 402

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                 WTAM+ GL+ +G  + A+ LF  M+  NV  +  T+ +++  C +   +++   
Sbjct: 403 KRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRS 462

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED-FMNAMPMKPDAVLWRTLIWACKV 385
           V   +  R+G E    +   ++D+ A+ G +  AE  F N   +K D +L  ++I    +
Sbjct: 463 VHGHL-IRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFHLK-DVILCNSMIMGYGM 520

Query: 386 HEDTERAERL 395
           H    +A R+
Sbjct: 521 HGQGHQALRV 530



 Score =  130 bits (326), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 174/393 (44%), Gaps = 16/393 (4%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
            T+ +   +HAQI++   SN    ++F         S  G LNYA  +    P   +   
Sbjct: 51  NTLIDVKSIHAQIIRNYASN----QHFLATKLIKIYSNLGFLNYAYKVFDQCPHRETILC 106

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N M+  +  + +   +     LF  M  R        +++T  F LK C  L     G +
Sbjct: 107 NAMMGGFLKNME---YKEVPKLFKMMGLRDIE----LNSYTCVFGLKACTVLLDDEVGME 159

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           L     + GF    ++ +++I+     G+L  AR +FD MP+RDVV W S+I G V    
Sbjct: 160 LVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGL 219

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             E I+LF  M+  G+  +  T+ S+L+AC +SG   +G  VH  V      +    V T
Sbjct: 220 LKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMGD-DVFVLT 278

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           +L+DMY   G  ESA              W AMISG   +G+  E+  LF ++       
Sbjct: 279 SLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGF 338

Query: 304 DERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           D  T+ +++  C + +DL  E   V      R G+E  +     +VD+ ++ G +K+A D
Sbjct: 339 DSGTLVSLIRGCSQTSDL--ENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASD 396

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
               M  K + + W  ++     +   E A +L
Sbjct: 397 VFRTME-KRNVITWTAMLVGLSQNGYAEGALKL 428


>Medtr5g091640.1 | PPR containing plant-like protein | HC |
           chr5:39962522-39960655 | 20130731
          Length = 542

 Score =  313 bits (803), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 184/508 (36%), Positives = 278/508 (54%), Gaps = 47/508 (9%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           TT++   Q++  I+K G + N  P   ++  TF A SPSG++NYA  L    P  N Y +
Sbjct: 39  TTINHFHQIYPHIIKTGLTLN--PIASTRALTFCA-SPSGNINYAYKLFVRMPNPNLYSW 95

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           NT++RA+S SS P     A+SLF+ ML         P   T+P V K  A+L  A  G Q
Sbjct: 96  NTIIRAFSRSSTPQF---AISLFVDMLYSQIQ----PQYLTYPSVFKAYAQLGHAHYGAQ 148

Query: 124 LHGFITKMGFGSDCYIMNALIHMYS----------VF----------------------- 150
           LHG + K+G  +D +I N +I+MY+          VF                       
Sbjct: 149 LHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYA 208

Query: 151 --GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
             G++  +R LFD M  R  VSW S+I G V + + +EA+ELF +M   G EV++ T+VS
Sbjct: 209 KCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVS 268

Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX 268
           +L ACA  GAL  G+ VH  +K +   E    V TA+IDMY K G +E+A          
Sbjct: 269 LLNACAHLGALQHGKWVHDYIK-RNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRR 327

Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAYMV 327
               W ++I GLA +G  +EA + F ++E+   +KPD  +   VL+AC++   + +A   
Sbjct: 328 GLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDY 387

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           F  M  +Y IEP+I+H+ C+VD+L +AG L+EAE+ +  MP+KPDA++W +L+ +C+ H 
Sbjct: 388 FELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHR 447

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
           + + A R  ++  E+   D+  Y+L SNV+A+  K+    E R LM +    K PG S I
Sbjct: 448 NVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSI 507

Query: 448 EVDGALHEFVMGDYNHPEADNIFVKLDE 475
           E+ G +HEF+ G   HP+   I+  L++
Sbjct: 508 ELYGEVHEFIAGGRLHPKTQEIYHLLND 535


>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38635968-38632937 | 20130731
          Length = 694

 Score =  312 bits (800), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 191/593 (32%), Positives = 302/593 (50%), Gaps = 58/593 (9%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
            ++S   QLH+ I   G S++    N   L  F   S  G+LN A  L    P  N    
Sbjct: 92  NSVSLGKQLHSLIFTSGYSSDKFISN--HLLNF--YSKFGELNNAVKLFDRMPRRNYMSC 147

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA------------------------ 99
           N M++AY    +  +   A +LF  M  R      A                        
Sbjct: 148 NIMIKAYLEMGNIEN---AKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLFSRMNVLG 204

Query: 100 --PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
             PD ++F  VL+ CA L+    G +    +  +G                         
Sbjct: 205 FVPDEYSFGSVLRGCAHLRALSVGDRFTLMLRNVG------------------------E 240

Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
            +   MP+ ++V+W +L+ G   +      ++ +  M  AG   +  T VSV+ +C++  
Sbjct: 241 RIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELA 300

Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
            L  G+++H  V  K        V ++L+ MY+K G ++ +              W++MI
Sbjct: 301 TLCQGKQIHAEVI-KAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMI 359

Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           +    HG C++AI LF + E  N+  +E T  ++L AC ++ L  +    F  M ++YG+
Sbjct: 360 AAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGL 419

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
           +  ++H+ CVVDLL R+GCL+EAE  + +MP+  DA++W+TL+ ACK+H++ E A R+ +
Sbjct: 420 KARLEHYTCVVDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAE 479

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
           + L +   D  SY+L + ++AS  +W N +EVR  M  K + K PG S +EV   +H+F 
Sbjct: 480 EVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQVHQFH 539

Query: 458 MGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYG 517
           MGD +H +   I   L+E+  ++K +GY P +S VL ++D+EEK   L HHSEKLA+A+ 
Sbjct: 540 MGDESHSKFVEINQYLEELTSEMKMQGYVPDISSVLHDMDNEEKEYNLTHHSEKLAIAFA 599

Query: 518 LIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDC 570
           L+   +G  IR++KN+R C DCH  +K IS+I   +IIVRD  RFHHFKNG C
Sbjct: 600 LMTIPKGEPIRVMKNMRVCGDCHVAIKYISEIKNLEIIVRDSSRFHHFKNGRC 652



 Score = 97.1 bits (240), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 61/323 (18%)

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
           F  +++ C        GKQLH  I   G+ SD +I N L++ YS FG+L  A +LFDRMP
Sbjct: 81  FSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 140

Query: 165 -------------------------------DRDVVSWTSLIDGLVDHDRPVEAIELFGR 193
                                          +R+V +W +++ GLV      EA+ LF R
Sbjct: 141 RRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEAL-LFSR 199

Query: 194 MLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG 253
           M   G   ++ +  SVLR CA   ALS+G +   +++         NV   +I       
Sbjct: 200 MNVLGFVPDEYSFGSVLRGCAHLRALSVGDRFTLMLR---------NVGERIIKWMPNCN 250

Query: 254 CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLS 313
            +                 W  +++G A +      +D +  M+    +PD  T  +V+S
Sbjct: 251 LV----------------AWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVIS 294

Query: 314 ACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA-EDFMNAMPMKPD 372
           +C     + +   + +++ K  G    +     +V + ++ G L+++ + F+     + D
Sbjct: 295 SCSELATLCQGKQIHAEVIKA-GASSVVTVISSLVSMYSKCGSLQDSIKAFLEC--EERD 351

Query: 373 AVLWRTLIWACKVHEDTERAERL 395
            VLW ++I A   H   E+A +L
Sbjct: 352 VVLWSSMIAAYGFHGQCEKAIKL 374


>Medtr5g020650.1 | PPR containing plant-like protein | HC |
           chr5:7912169-7910613 | 20130731
          Length = 518

 Score =  311 bits (798), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 176/498 (35%), Positives = 267/498 (53%), Gaps = 41/498 (8%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           + + E  Q+H Q+LK GT  +      S+L T  A     +L YAR++     + N+  +
Sbjct: 22  SNIGELKQIHGQLLKKGTIRHKL--TVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMW 79

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           NTM+RAYS S+DP     AL L+  ML    H +P  + +TFPF+LK C+ L    +  Q
Sbjct: 80  NTMIRAYSNSNDPEE---ALLLYHQMLH---HSIPH-NAYTFPFLLKACSALSALAETHQ 132

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG------ 177
           +H  I K GFGS+ Y  N+L+ +Y++ G +  A  LFD +P RD+VSW ++IDG      
Sbjct: 133 IHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGN 192

Query: 178 -------------------------LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRA 212
                                     V      EA+ L  +ML AG++ +  T+   L A
Sbjct: 193 VEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSA 252

Query: 213 CADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
           CA  GAL  G+ +H  +  K +I+    +  ALIDMY K G ++ A              
Sbjct: 253 CAGLGALEQGKWIHTYIG-KNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYT 311

Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
           WTA+I G A HG   EA+D F +M+   +KP   T TAVL+AC +  LV E   +F  M 
Sbjct: 312 WTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMS 371

Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
             Y ++P ++H+GC+VDLL RAG LKEA++F+ +MP+KP+A +W +L+ AC +H+  E  
Sbjct: 372 TFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELG 431

Query: 393 ERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGA 452
           + + K  +E+  +  G YI  ++++A+ G+W   ++VR  +  KGL+  PG S I ++G 
Sbjct: 432 KEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGV 491

Query: 453 LHEFVMGDYNHPEADNIF 470
            HEF  G   HP    ++
Sbjct: 492 AHEFFAGAEPHPHVREMY 509


>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr6:20800229-20798334 | 20130731
          Length = 403

 Score =  310 bits (795), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 179/443 (40%), Positives = 251/443 (56%), Gaps = 56/443 (12%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D Y  N +I +Y   G++  A+ LFD M +RDVVSW+++I G V     +E +E F  ML
Sbjct: 15  DLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCFMEDLEFFHNML 74

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
           ++ V+ N+ T+VS L       A+ M  ++                  +LIDMYAK G I
Sbjct: 75  QSEVKPNEYTMVSAL-------AIKMNDRL----------------LASLIDMYAKCGEI 111

Query: 256 ESAXXXXXXXXXXXXXX-WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
           +SA               W AMI G A HG  +EAI LF +M+   V P++ T  A+L+A
Sbjct: 112 DSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERVSPNKVTFIALLNA 171

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C +  +++E    F  M   YGI P I+H+GC+VDLL+R+  LKEAE+ + +MPM PD  
Sbjct: 172 CSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEAEEMILSMPMAPDVA 231

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           +W  L+ AC++++D ER  R+ +   E+  +  G  +L  N+Y++ G+W+    +RE   
Sbjct: 232 IWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARILRE--- 288

Query: 435 KKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLL 494
                                         E   I+  L+EM+ KLK  GY P+L EVLL
Sbjct: 289 ----------------------------RNEIREIYSFLEEMIRKLKIAGYVPELGEVLL 320

Query: 495 EIDDEE-KATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRD 553
           + DDEE K T L  HSEKLA+A+GL+ T+ G+ I IVKNLR C DCHE +K ISK+Y R 
Sbjct: 321 DFDDEEDKETTLSVHSEKLAIAFGLMNTAPGTPICIVKNLRVCGDCHEAIKFISKVYDRV 380

Query: 554 IIVRDRIRFHHFKNGDCSCKDYW 576
           IIVRDR+R+HHFK+G CSCKDYW
Sbjct: 381 IIVRDRMRYHHFKDGVCSCKDYW 403


>Medtr1g114220.1 | PPR containing plant-like protein | HC |
           chr1:51543346-51541694 | 20130731
          Length = 550

 Score =  307 bits (787), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 182/510 (35%), Positives = 282/510 (55%), Gaps = 44/510 (8%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           +M E  +LHA  +  G S+  +     K+ +F+ALS SGD++Y+  + +   +   + +N
Sbjct: 26  SMLELKKLHAIGISYGLSHEYS--FIFKILSFSALSNSGDIDYSYRVFSQISSPTIFSWN 83

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
            ++R YS S +P    H+LS+F+ MLR   HGV APD  T+PF++K  ARL   + G  +
Sbjct: 84  IIIRGYSNSKNP---IHSLSIFLKMLR---HGV-APDYLTYPFLVKASARLSKQKSGVSV 136

Query: 125 HGFITKMGFGSDCYIMNALIHMYS----------VF---------------------GDL 153
           H  I K G  SD +I N+LIHMY+          VF                     G++
Sbjct: 137 HAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEM 196

Query: 154 GVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
            +A+++F+ M +RDV SW+S IDG V      EA+ +F +M   G + N+ T+VSVL AC
Sbjct: 197 AMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSAC 256

Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX--XXXXXXXXX 271
           A  GAL  GR +H  + +   +     + T+L+DMYAK G IE A               
Sbjct: 257 AHLGALQKGRMMHQYIIDN-LLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVF 315

Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
            W AMI GLA+HGL +E++ LF EM+   ++ DE T   +L+AC +  LV+EA+  F  +
Sbjct: 316 IWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESL 375

Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
            KR G+ PT +H+ C+VD+LARAG L  A  F+  +P++P A +   +   C  H + + 
Sbjct: 376 VKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHRNFDL 434

Query: 392 AERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDG 451
           AE + ++ +E+  ++ G YI  SNVYA V +W +   +RE M ++G+ K PG S +E+  
Sbjct: 435 AETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVEISE 494

Query: 452 ALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
             H F+  D  HP++D  +  L  +V ++K
Sbjct: 495 IHHRFIAHDKTHPDSDETYSMLHFVVCQMK 524


>Medtr6g460480.1 | organelle transcript processing protein, putative
           | HC | chr6:20783537-20781756 | 20130731
          Length = 439

 Score =  307 bits (786), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 194/519 (37%), Positives = 278/519 (53%), Gaps = 88/519 (16%)

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           M++A+S+S+    H +  S+ +F L     G   P+ ++F F    C      R+G+Q+ 
Sbjct: 1   MIKAHSMSN----HSYRDSVAVFKLLTRDSGF-FPNRYSFVFAFGACGNGLCVREGEQVF 55

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
               K+G   + +++NALI M+  +GD+  AR++   M                      
Sbjct: 56  LHAVKVGLDCNVFVVNALIGMFGKWGDVEDARKVGCFM---------------------- 93

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VST 243
           EA++LF +ML++ V+ N+ T               MG  +H  ++   R E K N  +  
Sbjct: 94  EALDLFHKMLQSEVKPNEYT---------------MGNWIHVYIR---RGEIKMNDRLLA 135

Query: 244 ALIDMYAKSGCIESAXXXX-XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           +LIDMYAK G IESA               W AMI G A HG  +EAI+           
Sbjct: 136 SLIDMYAKCGEIESASSVFCEHKVKRKVWPWNAMIGGFAMHGKPEEAIN----------- 184

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
                                    F  M   YGI P I+H+GC+VDLL+R+G LK+AE+
Sbjct: 185 ---------------------GKSYFELMGSDYGINPEIEHYGCMVDLLSRSGLLKDAEE 223

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGK 422
            + +MPM PD  +W  L+ AC++++D ER  R+ +   E+  +  G  +L  N+Y++  +
Sbjct: 224 MILSMPMAPDVAIWGALLNACRIYKDMERRYRIGRIIKEIDPNHIGCNVLLGNIYSTSER 283

Query: 423 WSNKAEVRELMNKKGL----IKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVD 478
           W+   E R L  K  +     K PG S IE++G  H+F++GD +HP++  I+  LDEM+ 
Sbjct: 284 WN---EARMLREKNEINSDRKKIPGFSSIELNGIFHQFLVGDRSHPKSKEIYSFLDEMIS 340

Query: 479 KLKKEGYNPKLSEVLLEIDDEE-KATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCE 537
           KLK  GY P+L EVLL+ DDEE K T L  HSEKLA+A+GL+ T+ G+ I IVKNLR C 
Sbjct: 341 KLKIAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPICIVKNLRVCA 400

Query: 538 DCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           DCH   K ISK+Y R IIVRDR+R+HHFKNG CSCKDYW
Sbjct: 401 DCHHATKFISKVYDRVIIVRDRMRYHHFKNGVCSCKDYW 439


>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:21773208-21775311 | 20130731
          Length = 662

 Score =  303 bits (777), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/478 (35%), Positives = 253/478 (52%), Gaps = 17/478 (3%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P+ +T   VL  C  L     GK +HG + K G  S      +L+ MYS    +  + ++
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKV 260

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+ +     V+WTS I GLV + R   A+ +F  M+   +  N  T+ S+L AC+    L
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAML 320

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G ++H  V  K  ++    V  ALI +Y K G +E A                 MI  
Sbjct: 321 EAGEQIHA-VTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYA 379

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            A +G   EA++LF  ++   ++P+  T  ++L AC NA LV E   +FS ++  + IE 
Sbjct: 380 YAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIEL 439

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
           T  H+ C++DLL RA   +EA   +      PD + WRTL+ ACK+H + E AE+ MK+ 
Sbjct: 440 TRDHYTCMIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           L+    D G++IL +N+YAS GKW N  E++       L K P  S +++D  +H F+ G
Sbjct: 499 LDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAG 558

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
           D +HP A  I   L E+++K+   GYNP    VL ++++E+K + L +HSEKLA+A+ L 
Sbjct: 559 DLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALW 618

Query: 520 RT-SQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           +T  + + IRI KNLR C D               II RD  RFHHFK G CSCKDYW
Sbjct: 619 KTCGKNTAIRIFKNLRVCGDY--------------IIARDAKRFHHFKGGICSCKDYW 662



 Score =  151 bits (381), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 192/373 (51%), Gaps = 15/373 (4%)

Query: 48  ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
           AR L    P  +   +N+M+ ++ +S   T    A+ L+  ML     GV  PD +TF  
Sbjct: 54  ARKLFDEMPNRHIVTWNSMISSH-VSRGKTKE--AIELYSNMLFE---GV-LPDAYTFSA 106

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFG-SDCYIMNALIHMYSVFGDLGVARELFDRMPDR 166
           + K  + + ++R+G++ HG    +GF  SD ++   ++ MY+ FG +  AR +FDR+ D+
Sbjct: 107 IFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDK 166

Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH 226
           DVV +T+LI G   H    EA+E+F  M+ + ++ N+ T+ SVL +C + G L  G+ +H
Sbjct: 167 DVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIH 226

Query: 227 GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC 286
           G+V  K  +E      T+L+ MY+K   +E +              WT+ I GL  +G  
Sbjct: 227 GLVV-KYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGRE 285

Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
           + A+ +F EM  C++ P+  T++++L AC +  ++     + + +  + G++        
Sbjct: 286 EVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHA-VTVKLGVDGNKFVDAA 344

Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV----HEDTERAERLMKQHLEM 402
           ++ L  + G +++A    +++  + D V   T+I+A       HE  E  ERL K  LE 
Sbjct: 345 LIHLYGKCGNVEKARSVFDSLT-ELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEP 403

Query: 403 GVDDSGSYILASN 415
            V    S +LA N
Sbjct: 404 NVVTFISILLACN 416



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 103/203 (50%), Gaps = 4/203 (1%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           ALS+F  M+R       +P++FT   +L  C+ L +   G+Q+H    K+G   + ++  
Sbjct: 288 ALSMFREMMRCSI----SPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDA 343

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
           ALIH+Y   G++  AR +FD + + D+VS  ++I     +    EA+ELF R+ + G+E 
Sbjct: 344 ALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEP 403

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           N  T +S+L AC ++G +  G ++  +++    IE   +  T +ID+  ++   E A   
Sbjct: 404 NVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATML 463

Query: 262 XXXXXXXXXXXWTAMISGLASHG 284
                      W  +++    HG
Sbjct: 464 IEEGKNPDVIQWRTLLNACKIHG 486


>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:3127058-3124158 | 20130731
          Length = 845

 Score =  303 bits (777), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 175/511 (34%), Positives = 275/511 (53%), Gaps = 9/511 (1%)

Query: 48  ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
           ARL+        +  +NTM+  Y+          A + F+ ML     GV  P       
Sbjct: 273 ARLVFEGMINKCAVSWNTMIDGYAQIGKSEE---AFATFLKMLDE---GVE-PTRVAIMA 325

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
            L  CA L    +G+ +H  + +     +  +MN+L+ MYS    + +A  +F+ +  + 
Sbjct: 326 ALTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKT 385

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
            V+W ++I G   +    EA+ LF  M    V+ +  T+V+V+ A AD     M + +HG
Sbjct: 386 NVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHG 445

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
           +   +  ++    V+TALIDMYAK G  ++A              W AMI G  +HGL K
Sbjct: 446 LAI-RTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGK 504

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
           EAID+F  M+   V P++ T  +V+SAC ++  V E    F  MK+ YG+EP++ H+  V
Sbjct: 505 EAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAV 564

Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
           VDLL RAG L  A + +  MP+KP   +   ++ ACK+H++ E  E+   +  E+  D+ 
Sbjct: 565 VDLLGRAGKLHGAWNLIEEMPIKPGITVLGAMLGACKIHKNVELGEKAADKLFELDPDEG 624

Query: 408 GSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEAD 467
           G ++L +N+Y S   W   A+VR  M KKG+ K PG S +E+   +H F  G  NHP+A 
Sbjct: 625 GYHVLLANMYVSASMWDKVAKVRTAMEKKGIHKTPGCSFVELRNEVHTFYSGSTNHPQAK 684

Query: 468 NIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKI 527
            I+  L+ + DK++  GY P  + +  +++++ K   L  HSE+LA+A+GL+ T+ G+ I
Sbjct: 685 KIYAFLEALGDKIRDAGYIPDTNSI-HDVEEKVKEQLLSSHSERLAIAFGLLNTNHGTPI 743

Query: 528 RIVKNLRSCEDCHEFMKLISKIYQRDIIVRD 558
            + KNLR C DCH+  K IS +  R+IIVRD
Sbjct: 744 HVRKNLRVCGDCHDVTKYISLVTGREIIVRD 774



 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 10/318 (3%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           + +++  Y+ +  P     AL LF    R    G+ A D+ T   +L   A +K  R GK
Sbjct: 187 WTSLIAGYAQNGYPKR---ALDLF---YRMQEAGLKA-DSVTLVSILPAVADIKDLRIGK 239

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
            +HG+  ++GF S   ++NAL++MY   G   +AR +F+ M ++  VSW ++IDG     
Sbjct: 240 SIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIG 299

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
           +  EA   F +ML+ GVE     +++ L ACAD G L  GR VH +V +KK ++ +  V 
Sbjct: 300 KSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKK-LDFEVPVM 358

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
            +L+ MY+K   ++ A              W AMI G A +G   EA+ LF  M++  VK
Sbjct: 359 NSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVK 418

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PD  T+ AV++A  +  + R A  +   +  R  ++  +     ++D+ A+ G  + A  
Sbjct: 419 PDCFTLVAVITALADLSVNRMAKWIHG-LAIRTFMDNDVYVATALIDMYAKCGATQTARK 477

Query: 363 FMNAMPMKPDAVLWRTLI 380
             + M  +   + W  +I
Sbjct: 478 LFDMMHER-HVITWNAMI 494



 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 160/339 (47%), Gaps = 12/339 (3%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           T+     Q+   I+K G+  ND     +KL         G +N A L+  +        Y
Sbjct: 30  TSTKHLHQILPLIIKTGSYYNDHLFQ-TKLINM--FFKHGSINEASLVFDTVEHKQDVLY 86

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           + ML+ Y+ +S             F  R    GV  P  + F ++L+ C +     +G++
Sbjct: 87  HAMLKGYAKNSS------LCDALCFYHRMQNDGV-RPVVYDFAYLLQLCGKKFELEKGRE 139

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +HG +   GF  D + M  ++  Y   G++  A ++F+R+ ++D+VSWTSLI G   +  
Sbjct: 140 IHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSWTSLIAGYAQNGY 199

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
           P  A++LF RM EAG++ +  T+VS+L A AD   L +G+ +HG    +   E K +V  
Sbjct: 200 PKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIGKSIHGYAL-RLGFESKVSVIN 258

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           AL+ MY + GC   A              W  MI G A  G  +EA   FL+M    V+P
Sbjct: 259 ALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEP 318

Query: 304 DERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTI 341
               + A L+AC +  DL R  ++    ++K+   E  +
Sbjct: 319 TRVAIMAALTACADLGDLERGRFVHKLVLQKKLDFEVPV 357


>Medtr7g103230.1 | PPR containing plant-like protein | HC |
           chr7:41735375-41738881 | 20130731
          Length = 970

 Score =  302 bits (774), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 176/523 (33%), Positives = 277/523 (52%), Gaps = 13/523 (2%)

Query: 56  PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
           P  N   YN +L     +++      A+ LFI M+     GV   D F+    +  C+ L
Sbjct: 360 PEKNCVTYNVLLSGLCRNAEG---LKAVELFIRMVEE---GVELTD-FSLSSGINACSLL 412

Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI 175
              R  +Q+HGF  K GFGS+ ++  AL+ MY+  G +  A ++++ + +   V WTS++
Sbjct: 413 ADYRVSRQMHGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMM 472

Query: 176 DGLVDHDRPVEAIELF--GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
            G   + +P EA  LF  G   E  + +++  + S+L  C   G   MG+++H  V  K 
Sbjct: 473 CGYARNGQPREAFSLFHLGHS-EWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVL-KF 530

Query: 234 RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
                  V   +++MY K G ++ A              W  +ISG  +H     A++++
Sbjct: 531 GFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYLTHRQGDRALEIW 590

Query: 294 LEMETCNVKPDERTMTAVLSACRNA--DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
           L+M+   +KPD+ T   ++SA R    +LV +  ++F+ MK  Y IEPT QH+   + +L
Sbjct: 591 LKMQEEGIKPDDITFVLIISAYRQTSLNLVDDCRILFNSMKTVYHIEPTSQHYSSFISVL 650

Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYI 411
              G L+EA + +N M  KP A +WR L+  C++H++T   +   K  L +  +D  +YI
Sbjct: 651 GHWGLLEEALETINKMSFKPSAFVWRALLDGCRLHKNTMIGKLAAKNILALEPNDPSTYI 710

Query: 412 LASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFV 471
           L SN+++S G+W      RE M +KG  K P  S I     +H F   D +H +  +I+ 
Sbjct: 711 LVSNLHSSSGRWDCSERTRENMREKGFRKHPAQSWIICRKKMHSFYARDRSHQQDKDIYR 770

Query: 472 KLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVK 531
            L+ ++ +  K GY P+ S VL E+++ +K   L +HS KLA AYGL+ T  G  IRIVK
Sbjct: 771 GLEILILECLKVGYEPETSFVLHEVEEHQKKKFLFNHSSKLAAAYGLLMTKPGKPIRIVK 830

Query: 532 NLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKD 574
           N+  C DCH F+K  S + +RDI +RD   FH F +G CSCKD
Sbjct: 831 NILLCGDCHTFLKCASFVTKRDIFLRDSSGFHCFSDGQCSCKD 873



 Score =  125 bits (315), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 187/455 (41%), Gaps = 60/455 (13%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
           +  +   LQLHA ++K G   +    N   LF     S  G    A  +    P  +   
Sbjct: 178 ILNLQFGLQLHAAVIKTGYLKSVFVSNALMLF----YSKCGFYKNAFKVFDEMPERDIAS 233

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +NT++   S +     +     LF  ML      V   D FT    L  CA   L  +GK
Sbjct: 234 WNTVM---SCAVQEFMYDDVFRLFCDMLVIDGLKV---DYFTLSTFLTACAASGLLMEGK 287

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTS--------- 173
           Q+H    K+G   +  + NALI  Y+ FGD+     LF+RM  RDV++WT          
Sbjct: 288 QVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFG 347

Query: 174 ----------------------LIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
                                 L+ GL  +   ++A+ELF RM+E GVE+ D ++ S + 
Sbjct: 348 FVDLGLKIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGIN 407

Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX 271
           AC+      + R++HG    K        V  AL+DMY + G +  A             
Sbjct: 408 ACSLLADYRVSRQMHGFAI-KFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSV 466

Query: 272 XWTAMISGLASHGLCKEAIDLF-LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
            WT+M+ G A +G  +EA  LF L      +  DE  +T++LS C            + D
Sbjct: 467 VWTSMMCGYARNGQPREAFSLFHLGHSEWKLIMDEVALTSMLSLCGTVG--------YHD 518

Query: 331 MKK-------RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
           M K       ++G    +Q    VV++  + G + +A    + M    D V W TLI   
Sbjct: 519 MGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMA-STDIVSWNTLISGY 577

Query: 384 KVHEDTERAERLMKQHLEMGVD-DSGSYILASNVY 417
             H   +RA  +  +  E G+  D  +++L  + Y
Sbjct: 578 LTHRQGDRALEIWLKMQEEGIKPDDITFVLIISAY 612



 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 13/277 (4%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
            +YA  L  S    N   Y+ ++ A+S S+         SLF+F L   T     P+++T
Sbjct: 114 FSYAHRLFLSQSPPNIVSYSALISAFSKSNREKQ-----SLFLF-LHMITVSSLRPNHYT 167

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
           +  VL  C R+   + G QLH  + K G+    ++ NAL+  YS  G    A ++FD MP
Sbjct: 168 YVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVFDEMP 227

Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGR 223
           +RD+ SW +++   V      +   LF  ML   G++V+  T+ + L ACA SG L  G+
Sbjct: 228 ERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEGK 287

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
           +VH     K  +E + NV  ALI  Y   G I+                WT M+      
Sbjct: 288 QVHAHAV-KVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEF 346

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNAD 319
           G     + +F EM   N      T   +LS  CRNA+
Sbjct: 347 GFVDLGLKIFDEMPEKNCV----TYNVLLSGLCRNAE 379



 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 9/285 (3%)

Query: 98  PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
           P P +F FPF L+  +  K     K +H  + K       ++  ALI  Y        A 
Sbjct: 63  PHP-SFLFPF-LRFSSHNKNPNLAKSIHATLLKNH--EIHHLTTALISTYINLRLFSYAH 118

Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE-AGVEVNDATVVSVLRACADS 216
            LF      ++VS+++LI      +R  +++ LF  M+  + +  N  T V+VL AC   
Sbjct: 119 RLFLSQSPPNIVSYSALISAFSKSNREKQSLFLFLHMITVSSLRPNHYTYVAVLTACTRI 178

Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
             L  G ++H  V +   ++    VS AL+  Y+K G  ++A              W  +
Sbjct: 179 LNLQFGLQLHAAVIKTGYLK-SVFVSNALMLFYSKCGFYKNAFKVFDEMPERDIASWNTV 237

Query: 277 ISGLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
           +S      +  +   LF +M   + +K D  T++  L+AC  + L+ E   V +   K  
Sbjct: 238 MSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEGKQVHAHAVK-V 296

Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           G+E  +     ++      G + +       M ++ D + W  ++
Sbjct: 297 GLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVR-DVITWTEMV 340


>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:1721493-1719058 | 20130731
          Length = 774

 Score =  302 bits (773), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 167/460 (36%), Positives = 255/460 (55%), Gaps = 11/460 (2%)

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYS-VFGDLGVARELF-DRMPDRDVVSWTSLIDGLVD 180
           QLH    K G  S+  ++ AL+  Y+ + G +    +LF D   + D+VSWT++I    +
Sbjct: 320 QLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAE 379

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
            D P +A  LF ++      ++  T    L+ACA         +VH  V  K+       
Sbjct: 380 RD-PEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVM-KQGFHNDTV 437

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           VS ALI  Y +SG +  +              W +M+   A HG  K+A+DLF +M+   
Sbjct: 438 VSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMD--- 494

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
           V PD  T  A+L+AC +A LV E   +F+ M + +GI P + H+ C+VDL  RAG + EA
Sbjct: 495 VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEA 554

Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
           E+ +  MPMKPD+V+W +L+ +C+ H + + A+    +   +   +S +YI  SN+Y+S 
Sbjct: 555 EELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSG 614

Query: 421 GKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKL 480
           G +     +R+ M    + K PG S +EV   +HEF  G  +HP+   I  +L+ ++ +L
Sbjct: 615 GSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETLIGQL 674

Query: 481 KKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGL----IRTSQGSKIRIVKNLRSC 536
           K+ GY P++   L +I+ E    QL HHSEK+AL + +    I    G+ I+I+KN+R C
Sbjct: 675 KEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNEGISPCAGNVIKIMKNIRIC 734

Query: 537 EDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            DCH FMKL SK++Q++I+VRD  RFHHFK   CSC DYW
Sbjct: 735 VDCHNFMKLASKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774



 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 16/270 (5%)

Query: 58  LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPT--HGVPAPDNFTFPFVLKCCARL 115
           L + YY ++ +  +++ +     H LSL   + +  +  +  P+     + F+   CA+ 
Sbjct: 32  LQNLYYASIAQPETIARNVNTQIHTLSLQGNLEKALSLVYTNPSLTLQDYAFLFHACAQK 91

Query: 116 KLARQGKQLHGFITKM--GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTS 173
           K  +QG  LH +I        +D ++ N L++MY   G L  AR LFD+MP R+ VSWT 
Sbjct: 92  KYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTV 151

Query: 174 LIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
           L+ G        E   LF  ML A    N+    SVL AC +   +  G +VH     K 
Sbjct: 152 LVSGYAQFGLIRECFALFSGML-ACFRPNEFAFASVLCACEEQD-VKYGLQVHA-AALKM 208

Query: 234 RIECKCNVSTALIDMYAK-SG--------CIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
            ++    V+ ALI MY+K SG          + A              W +MISG    G
Sbjct: 209 SLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRG 268

Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
           L  +AI LF  M    ++ +  T+  VLS+
Sbjct: 269 LGDKAIGLFAHMYCNGIRFNSTTLLGVLSS 298



 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 7/197 (3%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D  TF   LK CA     +   ++H  + K GF +D  + NALIH Y   G L ++ ++F
Sbjct: 400 DRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVF 459

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
             M   D+VSW S++     H R  +A++LF +M    V  + AT V++L AC+ +G + 
Sbjct: 460 TEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVE 516

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISG 279
            G ++   + E   I    +  + ++D+Y ++G I E+               W++++  
Sbjct: 517 EGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGS 576

Query: 280 LASHG---LCKEAIDLF 293
              HG   L K A D F
Sbjct: 577 CRKHGEADLAKLAADKF 593


>Medtr3g005330.1 | PPR containing plant-like protein | HC |
           chr3:156847-154639 | 20130731
          Length = 479

 Score =  301 bits (771), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 175/460 (38%), Positives = 262/460 (56%), Gaps = 19/460 (4%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           +T++   Q+HA+I   G ++N       K+  F A+S   ++NYA  +    P  +S+ +
Sbjct: 23  STLNHLKQIHARIFLTGFNHNLILS--GKIIMFCAVSQ--NMNYALNVFDKIPKPDSFLW 78

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           NTM+R +  S+  TH  +A+  F     +       PDNFTF F+LK  ARL+    GKQ
Sbjct: 79  NTMIRGFGNST--THSHNAIHFF-----KRMQLAHRPDNFTFSFILKIIARLRFVNLGKQ 131

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           LH  + K GF +  Y+ N+LIHMY +  D+ +A +LF+ M   ++VSW S+ID  V   +
Sbjct: 132 LHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGK 191

Query: 184 PVEAIELFGRMLEA---GVEV--NDATVVSVLRACADSGALSMGRKVHGIVKEK-KRIEC 237
             EAI+LF +M++    G+E+  + AT+V  L AC   G+L  GRKVH  V++       
Sbjct: 192 YNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGE 251

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
             +V  AL+DMYAK G +E A              W  MI G ASHG  +EA+ LF  M 
Sbjct: 252 SISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRML 311

Query: 298 TCNV-KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
             NV +PDE T   VL AC +  LV E    F  M + Y I+PTI+H+GC+VDLL RAG 
Sbjct: 312 HENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGL 371

Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNV 416
             EA + + +MP++ +A++WRTL+ AC+ + + E  E++ K  +E+  D S  Y+L +N+
Sbjct: 372 FVEAYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANM 431

Query: 417 YASVGKWSNKAEVRELMNKKGLIKP-PGSSRIEVDGALHE 455
           YAS G+W+  ++ R  M ++ + KP PG+S I + G   E
Sbjct: 432 YASTGQWNEMSKERRSMQERRVRKPEPGNSFIGIPGTRFE 471


>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:2848688-2851472 | 20130731
          Length = 873

 Score =  298 bits (763), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 172/476 (36%), Positives = 252/476 (52%), Gaps = 6/476 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD  T   VL  C+ L     G  LH    K G      + N LI MY+    +  A E+
Sbjct: 400 PDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEV 459

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F  + D++++SWTS+I GL  ++R  +A+  F  M+    + N  T+V VL ACA  GA 
Sbjct: 460 FHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQ-KPNWVTLVCVLSACARIGAF 518

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
           + G+++H     +  +     +  A++DMY + G +E A              W  +++G
Sbjct: 519 TCGKEIHAYAL-RTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSIDQDVST-WNILLTG 576

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            A  G    A +LF  M   NV P+E T  ++L AC  + +V E    +  MK +Y I+P
Sbjct: 577 YAERGKGTLATELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKP 636

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            ++H+ CVVDLL RAG L++A +F+  +PMKPD  +W  L+ AC++H   E  E   K  
Sbjct: 637 NLKHYACVVDLLGRAGKLEDAYEFIQKIPMKPDPAVWGALLNACRIHRRVELGELAAKNI 696

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
                   G YIL SN+YA    W   AEVR++M + G+I  PG S +E  G +H F+ G
Sbjct: 697 FHDDTTSVGYYILLSNLYADNNIWDKVAEVRKMMRQNGIIVDPGCSWVENKGTVHAFLSG 756

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYN-PKLSEVLLEIDDEEKATQLLHHSEKLALAYGL 518
           D  HP+   I   L+   +K+K+ G   P+ S   ++I +  KA     HSE+ A+ +GL
Sbjct: 757 DNFHPQIKEINALLERFYEKMKEAGIQGPESSH--MDIMEASKADIFCGHSERFAIGFGL 814

Query: 519 IRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKD 574
           I ++ G  I + KNL  C+ CH  +K ISK  +R+I VRD  RFHHFK G CSC D
Sbjct: 815 INSAPGMPIWVTKNLYMCQSCHNTVKFISKEVRREISVRDAERFHHFKGGICSCMD 870



 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 197/397 (49%), Gaps = 12/397 (3%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G+L  A  +    P  N + +N ++  Y+          AL+L+  ML         PD 
Sbjct: 148 GNLVDAWYVFGRMPERNLFSWNVLVGGYAKGG---FFDEALNLYDRMLWVGVR----PDV 200

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           +TFP VL+ C  +    +G+++H  + + GF SD  ++NALI MY+  GD+  AR +FD+
Sbjct: 201 YTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDK 260

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           MP +D +SW ++I G  ++   +E + LF RM+E  V+ +  T+ SV+ AC   G   +G
Sbjct: 261 MPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLG 320

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
           R++HG V   K      +V  +LI MY+  G +E A              WTAMISG  +
Sbjct: 321 REIHGYVMRTK-FSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYEN 379

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTI 341
           + + ++A++ +  ME   + PDE T+  VLSAC    DL  +  M   +  K+ G+   +
Sbjct: 380 NLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDL--DTGMNLHEKAKKTGLIFYV 437

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
                ++D+ A+  C+ +A +  +++  K + + W ++I   +++     A    K+ + 
Sbjct: 438 IVANKLIDMYAKCKCIDKALEVFHSIRDK-NIISWTSIILGLRINNRCYDALFFFKEMMR 496

Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
               +  + +   +  A +G ++   E+     + G+
Sbjct: 497 RQKPNWVTLVCVLSACARIGAFTCGKEIHAYALRTGV 533



 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 11/278 (3%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIM--NALIHMYSVFGDLGVARELFDRMPD 165
           +++ C   +  ++G ++  +ITK    +   +   N L+ M+  FG+L  A  +F RMP+
Sbjct: 103 LVRLCEWKRARKEGSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAWYVFGRMPE 162

Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
           R++ SW  L+ G        EA+ L+ RML  GV  +  T   VLR C     L  GR++
Sbjct: 163 RNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREI 222

Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
           H  V  +   E   +V  ALI MYAK G I++A              W AMI+G   +G 
Sbjct: 223 HVHVL-RFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFENGE 281

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVREAYMVFSDMKKRYGIEPTIQ 342
           C E + LF  M    V PD  TMT+V++AC    +  L RE +     M+ ++  +P++ 
Sbjct: 282 CLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHGYV--MRTKFSRDPSV- 338

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
            +  ++ + +  G ++EAE   +    + D V+W  +I
Sbjct: 339 -YNSLIQMYSSVGLVEEAEKVFSQTECR-DVVMWTAMI 374


>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
           chr1:15006779-15004629 | 20130731
          Length = 675

 Score =  296 bits (759), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 181/550 (32%), Positives = 268/550 (48%), Gaps = 74/550 (13%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +  M+  Y+   D  H   AL LF  M +        P++FT   VL  CARL     GK
Sbjct: 164 WTVMIGGYAQYGDANH---ALQLFSEMFKFDN--CIVPNDFTISCVLMSCARLSALIFGK 218

Query: 123 QLHGFITK--MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
            +H ++ +  + +    ++ N LI MYS  GD+  A+ +FD M  R+ +SWTSL+ G   
Sbjct: 219 HIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGM 278

Query: 181 HDRPVEAIELFGRMLEAGVEV---------------------------------NDATVV 207
           H    +A  +F  M +  +                                   ND T+ 
Sbjct: 279 HGCSEDAFRVFDEMRKEALSFGNGGSWNRFVXGDANHALQLFSEMFKIDNCIVPNDFTIS 338

Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKC-NVSTALIDMYAKSGCIESAXXXXXXXX 266
            VL +CA   AL  G+++H  V  +         V+  LIDMY+KSG +++A        
Sbjct: 339 CVLMSCARLSALKFGKQIHAHVLRRSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS 398

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                 WT++++G   HG  ++A  +F EM    +  D  T   VL AC+          
Sbjct: 399 KRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACK---------- 448

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
                           H+ C+VDLL RAG L EA   +N MP++P  V+W  L+ AC++H
Sbjct: 449 ----------------HYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIH 492

Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
            + E AE   K+ LE+  D+ G+Y L SN+YA+  +W + A +  LM + G+ K PG S 
Sbjct: 493 SNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSW 552

Query: 447 IEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLL 506
           ++    +  F +GD  H ++  I+  L +++ ++K        +  L ++DDEEK  QL 
Sbjct: 553 VKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKA-------NFSLHDVDDEEKGDQLS 605

Query: 507 HHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFK 566
            HSEKLALAY ++    G+ IRI KNLR C D H  +  IS I + +II+RD  RFH FK
Sbjct: 606 EHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFK 665

Query: 567 NGDCSCKDYW 576
           NG CSCK YW
Sbjct: 666 NGSCSCKGYW 675



 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 34/300 (11%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELF 191
           D    NA++  YS  G    A  LF +M +     DVV+W+S+I G        EA+++F
Sbjct: 15  DVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISGYAQRGFGCEAMDVF 74

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-----IVK-EKKRIECKCNVSTAL 245
            +M       N   ++S+L ACA  GAL  G++ H      I+K E         V  AL
Sbjct: 75  RKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDNDDLAVINAL 134

Query: 246 IDMYAKSGCIESAXXXXXXX--XXXXXXXWTAMISGLASHGLCKEAIDLFLEM---ETCN 300
           IDMYAK   +E A                WT MI G A +G    A+ LF EM   + C 
Sbjct: 135 IDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCI 194

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH------FGCVVDLLARA 354
           V P++ T++ VL +C      R + ++F      Y +  ++ +        C++D+ +++
Sbjct: 195 V-PNDFTISCVLMSC-----ARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKS 248

Query: 355 GCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM----KQHLEMGVDDSGSY 410
           G +  A+   ++M  K +A+ W +L+    +H  +E A R+     K+ L  G  + GS+
Sbjct: 249 GDVDTAQVVFDSMS-KRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFG--NGGSW 305


>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:2910760-2909010 | 20130731
          Length = 519

 Score =  295 bits (755), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 182/505 (36%), Positives = 256/505 (50%), Gaps = 75/505 (14%)

Query: 11  QLHAQILKLGTSNN-----DAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           Q+HA ++  G +NN     D     S        +P+   NYA  L    P  +++ YN 
Sbjct: 20  QIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVT-NYAHQLFAQIPQPDTFMYNV 78

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           M+R  S S +P     A+SL+  M R    G    D++TFPFVLK C RL     G  +H
Sbjct: 79  MIRGSSQSPNP---LRAISLYTEMHRHFVKG----DSYTFPFVLKACTRLFWVNTGSAVH 131

Query: 126 GFITKMGFGSDCYIMN-------------------------------ALIHMYSVFGDLG 154
           G + ++GFGS+  + N                               +LI  Y+  GDL 
Sbjct: 132 GMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLK 191

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDH-----------DRPV------------------ 185
           VAR+LF+ MP+RD+VSW  +I G V             + PV                  
Sbjct: 192 VARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGL 251

Query: 186 --EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             +A+ELF  M  AGV  ++ T++S+L ACAD G L  G+KVH  V E    +    +  
Sbjct: 252 SKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGN 311

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           ALIDMYAK G I+ +              W ++I G+A HG  KE++ LF  M+   + P
Sbjct: 312 ALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICP 371

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           +E T   VL AC +A  + E Y  F  M   Y IEP I+H GC+VD+L RAG LKEA  F
Sbjct: 372 NEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKF 431

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
           +++M ++P+A++WRTL+ ACKVH D E A+   ++   M  D SG Y+L SN+YAS G+W
Sbjct: 432 IDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEW 491

Query: 424 SNKAEVRELMNKKGLIKPPGSSRIE 448
               +VR+LM+  G+ K  GSS +E
Sbjct: 492 DGAEKVRKLMDDSGVTKIRGSSFVE 516



 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 132/346 (38%), Gaps = 72/346 (20%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYS--VFGDLGV------ARELFDRMPDRDVVSWTS 173
           KQ+H  +   GF ++   +  L+   S  + G          A +LF ++P  D   +  
Sbjct: 19  KQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNV 78

Query: 174 LIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIV---- 229
           +I G      P+ AI L+  M    V+ +  T   VL+AC     ++ G  VHG+V    
Sbjct: 79  MIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGMVLRLG 138

Query: 230 --------KEKKRIECKC---NVSTALID------------------------------- 247
                           KC   NV+T+L D                               
Sbjct: 139 FGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFN 198

Query: 248 ---------------MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
                           Y K G +ESA              W AMI+G    GL K+A++L
Sbjct: 199 EMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALEL 258

Query: 293 FLEMETCNVKPDERTMTAVLSACRN-ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
           F EM    V PDE T+ ++LSAC +  DL     +    M+   G   T+     ++D+ 
Sbjct: 259 FNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLG-NALIDMY 317

Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
           A+ G +KE+ D   ++  K D + W ++I    +H   + +  L K
Sbjct: 318 AKCGNIKESLDVFWSITDK-DVISWNSVIVGMALHGHGKESLSLFK 362


>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:3530268-3532784 | 20130731
          Length = 696

 Score =  294 bits (753), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/529 (31%), Positives = 281/529 (53%), Gaps = 9/529 (1%)

Query: 48  ARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPF 107
           AR      P  +S  + TM+       D  ++  A  LF+ M     +G     + TF  
Sbjct: 177 ARTWFDDMPERDSSSWMTMIGGLV---DSRNYSEAFELFLCMWEEFNNG----KSRTFAA 229

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           +++  ARL     G+Q+H  I K     D ++  ALI MYS  G++  AR +FD+MP + 
Sbjct: 230 MVRASARLDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKT 289

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
            V W ++I G        EA+ ++ +M ++G +++  T+  V+  CA   +L  G++ H 
Sbjct: 290 TVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHA 349

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
            +  ++        ++AL++ Y+K G +E+A              W A+I+G   HG  +
Sbjct: 350 ALV-RRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGE 408

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
           EAI++F +M   N+ P+  T  AVLSAC  + L    + +F  M + + I+P   H+ C+
Sbjct: 409 EAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAMHYACM 468

Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
           ++LL R G L EA   +   P  P   +W  L+ AC++H++ E  +   ++   M  +  
Sbjct: 469 IELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACRMHKNLELGKFAAEKLYGMEPEKL 528

Query: 408 GSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEAD 467
            +Y++  N+Y S GK    A+V + + +KGL   P  + IEV+   H F+ GD +H +  
Sbjct: 529 CNYVMLLNIYNSSGKLKEAADVLQTLKRKGLRMLPAYTWIEVNKQPHAFLCGDKSHKQTK 588

Query: 468 NIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKI 527
            I+ K+D ++ ++ + GY  +   +L ++D+EE+   + +HSEKLA+A+G++ T     +
Sbjct: 589 KIYKKVDSLMVEISRHGYVMEKETLLPDVDEEEQRV-IKYHSEKLAIAFGIMNTPDWLPL 647

Query: 528 RIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           +I +  R C DCH  +KLI+ +  R+I++RD  RFH FKNG CSC +YW
Sbjct: 648 QITQRHRVCGDCHNAIKLITLVTGREIVLRDASRFHRFKNGSCSCGNYW 696



 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 4/339 (1%)

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           T+  ++  C RL+     K++  ++   GF  D Y+MN ++ M+     +  AR  FD M
Sbjct: 125 TYDALISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDARTWFDDM 184

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
           P+RD  SW ++I GLVD     EA ELF  M E        T  +++RA A    + +GR
Sbjct: 185 PERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASARLDCIEVGR 244

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
           ++H  +  K+ +     V  ALIDMY+K G IE A              W  +I+G A  
Sbjct: 245 QIHTCIL-KRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFR 303

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G  +EA+ ++ +M     K D  T++ V++ C     +       + + +R G    +  
Sbjct: 304 GFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRR-GFGTDLVA 362

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
              +V+  ++ G ++ A    + M  K + + W  LI     H   E A  + ++ L+  
Sbjct: 363 NSALVNFYSKWGRMENARHVFDKMHRK-NIISWNALIAGYGHHGRGEEAIEMFEKMLQEN 421

Query: 404 VDDSGSYILASNVYASVGKWSNKA-EVRELMNKKGLIKP 441
           +  +    LA     S    S +  E+ + M++   IKP
Sbjct: 422 MTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKP 460


>Medtr7g417770.1 | PPR containing plant-like protein | HC |
           chr7:5697167-5694522 | 20130731
          Length = 881

 Score =  293 bits (751), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/495 (33%), Positives = 270/495 (54%), Gaps = 14/495 (2%)

Query: 8   EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
           E +QLH   +K G   N    N + L  +A     G L  A L+       ++  +N ++
Sbjct: 390 EGIQLHGLAVKCGLDFNICVAN-TILDMYA---KCGALMEACLIFDDMEIKDAVSWNAII 445

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
            A+  +    H    L+LF+ MLR        PD++TF  V+K CA  K    G ++HG 
Sbjct: 446 AAHEQNE---HVEETLALFVSMLRSTME----PDDYTFGSVVKACAGKKALNYGMEVHGR 498

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           + K G G D ++ +A+I MY   G L  A ++ +R+ +R  VSW S+I G     +   A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           +  F RML+ GV  ++ T  +VL  CA+   + +G+++HG +  K ++     +++ ++D
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQIL-KLQLHSDVYIASTIVD 617

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY+K G ++ +              W+AMI   A HGL ++AI LF EM+  NVKP+   
Sbjct: 618 MYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTI 677

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
             +VL AC +   V +    F +M+  YG++P ++H+ C+VDLL R+G + EA + + +M
Sbjct: 678 FISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESM 737

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
           P + D V+WRTL+  C++  + E AE+     L++   DS +Y+L SNVYA  G W   A
Sbjct: 738 PFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVA 797

Query: 428 EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
           ++R  M    L K PG S I+V   +H F++GD  HP ++ I+ +   +VD++K +GY P
Sbjct: 798 KIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVP 857

Query: 488 KLSEVLL--EIDDEE 500
           ++   LL  E+D+++
Sbjct: 858 EIDGFLLDEEVDEQD 872



 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 178/394 (45%), Gaps = 18/394 (4%)

Query: 31  SKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFML 90
           + +F +A +   G++ +A+ L  S P  +   +N+ML  Y  +      FH  S+ IF  
Sbjct: 109 TMIFGYAGV---GNMEFAQFLFDSMPERDVVSWNSMLSCYLQNG-----FHRKSIEIFTK 160

Query: 91  RRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVF 150
            R        D  TF  VLK C  ++    G Q+H    +MGF SD     AL+ MYS  
Sbjct: 161 MRLLE--IQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218

Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
             L  A  +F  MP+R+ V W+++I G V +DR  E ++L+  ML+ G+ V+ AT  S  
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
           R+CA   A  +G ++H     K        V TA +DMYAK   +  A            
Sbjct: 279 RSCAGLSAFELGTQLHAYAL-KTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337

Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
               A+I G A      EA+++F  ++   +  DE +++  L+AC       E  +    
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG-IQLHG 396

Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
           +  + G++  I     ++D+ A+ G L EA    + M +K DAV W  +I A   HE  E
Sbjct: 397 LAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAA---HEQNE 452

Query: 391 RAERLMKQHLEM--GVDDSGSYILASNVYASVGK 422
             E  +   + M     +   Y   S V A  GK
Sbjct: 453 HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGK 486



 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 162/388 (41%), Gaps = 14/388 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLHA  LK     N    N     T    +    +  AR +  + P      +N ++  Y
Sbjct: 292 QLHAYALK----TNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGY 347

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           +          AL +F    R         D  +    L  C+ +K   +G QLHG   K
Sbjct: 348 ARQDQV---LEALEIF----RSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVK 400

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
            G   +  + N ++ MY+  G L  A  +FD M  +D VSW ++I     ++   E + L
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLAL 460

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F  ML + +E +D T  SV++ACA   AL+ G +VHG V  K  +     V +A+IDMY 
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVI-KSGMGLDWFVGSAIIDMYC 519

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           K G +  A              W ++ISG +S    + A+  F  M    V PD  T   
Sbjct: 520 KCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYAT 579

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           VL  C N   V     +   + K   +   +     +VD+ ++ G ++++       P K
Sbjct: 580 VLDICANLATVELGKQIHGQILK-LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-K 637

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQ 398
            D V W  +I A   H   E A +L ++
Sbjct: 638 RDYVTWSAMICAYAYHGLGEDAIKLFEE 665



 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 35/298 (11%)

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS-------------- 148
            TF  + + C+ LK    GKQ H  IT  GF    ++ N L+  Y               
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98

Query: 149 ------------VFGDLGV-----ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
                       +FG  GV     A+ LFD MP+RDVVSW S++   + +    ++IE+F
Sbjct: 99  MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
            +M    ++ + AT   VL+AC       +G +VH +  +    +      TAL+DMY+ 
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG-FDSDVVTGTALVDMYST 217

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
              ++ A              W+A+I+G   +    E + L+  M    +   + T  + 
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 312 LSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
             +C           + +  +K  +G +  +      +D+ A+   + +A    N  P
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVG--TATLDMYAKCDRMVDARKVFNTFP 333


>Medtr7g017700.1 | PPR containing plant-like protein | HC |
           chr7:5672185-5669078 | 20130731
          Length = 881

 Score =  293 bits (751), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/495 (33%), Positives = 270/495 (54%), Gaps = 14/495 (2%)

Query: 8   EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
           E +QLH   +K G   N    N + L  +A     G L  A L+       ++  +N ++
Sbjct: 390 EGIQLHGLAVKCGLDFNICVAN-TILDMYA---KCGALMEACLIFDDMEIKDAVSWNAII 445

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
            A+  +    H    L+LF+ MLR        PD++TF  V+K CA  K    G ++HG 
Sbjct: 446 AAHEQNE---HVEETLALFVSMLRSTME----PDDYTFGSVVKACAGKKALNYGMEVHGR 498

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           + K G G D ++ +A+I MY   G L  A ++ +R+ +R  VSW S+I G     +   A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           +  F RML+ GV  ++ T  +VL  CA+   + +G+++HG +  K ++     +++ ++D
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQIL-KLQLHSDVYIASTIVD 617

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY+K G ++ +              W+AMI   A HGL ++AI LF EM+  NVKP+   
Sbjct: 618 MYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTI 677

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
             +VL AC +   V +    F +M+  YG++P ++H+ C+VDLL R+G + EA + + +M
Sbjct: 678 FISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESM 737

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
           P + D V+WRTL+  C++  + E AE+     L++   DS +Y+L SNVYA  G W   A
Sbjct: 738 PFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVA 797

Query: 428 EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
           ++R  M    L K PG S I+V   +H F++GD  HP ++ I+ +   +VD++K +GY P
Sbjct: 798 KIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVP 857

Query: 488 KLSEVLL--EIDDEE 500
           ++   LL  E+D+++
Sbjct: 858 EIDGFLLDEEVDEQD 872



 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 178/394 (45%), Gaps = 18/394 (4%)

Query: 31  SKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFML 90
           + +F +A +   G++ +A+ L  S P  +   +N+ML  Y  +      FH  S+ IF  
Sbjct: 109 TMIFGYAGV---GNMEFAQFLFDSMPERDVVSWNSMLSCYLQNG-----FHRKSIEIFTK 160

Query: 91  RRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVF 150
            R        D  TF  VLK C  ++    G Q+H    +MGF SD     AL+ MYS  
Sbjct: 161 MRLLE--IQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218

Query: 151 GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
             L  A  +F  MP+R+ V W+++I G V +DR  E ++L+  ML+ G+ V+ AT  S  
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
           R+CA   A  +G ++H     K        V TA +DMYAK   +  A            
Sbjct: 279 RSCAGLSAFELGTQLHAYAL-KTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337

Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
               A+I G A      EA+++F  ++   +  DE +++  L+AC       E  +    
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG-IQLHG 396

Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
           +  + G++  I     ++D+ A+ G L EA    + M +K DAV W  +I A   HE  E
Sbjct: 397 LAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAA---HEQNE 452

Query: 391 RAERLMKQHLEM--GVDDSGSYILASNVYASVGK 422
             E  +   + M     +   Y   S V A  GK
Sbjct: 453 HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGK 486



 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 162/388 (41%), Gaps = 14/388 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLHA  LK     N    N     T    +    +  AR +  + P      +N ++  Y
Sbjct: 292 QLHAYALK----TNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGY 347

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           +          AL +F    R         D  +    L  C+ +K   +G QLHG   K
Sbjct: 348 ARQDQV---LEALEIF----RSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVK 400

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
            G   +  + N ++ MY+  G L  A  +FD M  +D VSW ++I     ++   E + L
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLAL 460

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F  ML + +E +D T  SV++ACA   AL+ G +VHG V  K  +     V +A+IDMY 
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVI-KSGMGLDWFVGSAIIDMYC 519

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           K G +  A              W ++ISG +S    + A+  F  M    V PD  T   
Sbjct: 520 KCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYAT 579

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           VL  C N   V     +   + K   +   +     +VD+ ++ G ++++       P K
Sbjct: 580 VLDICANLATVELGKQIHGQILK-LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-K 637

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQ 398
            D V W  +I A   H   E A +L ++
Sbjct: 638 RDYVTWSAMICAYAYHGLGEDAIKLFEE 665



 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 35/298 (11%)

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS-------------- 148
            TF  + + C+ LK    GKQ H  IT  GF    ++ N L+  Y               
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98

Query: 149 ------------VFGDLGV-----ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
                       +FG  GV     A+ LFD MP+RDVVSW S++   + +    ++IE+F
Sbjct: 99  MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
            +M    ++ + AT   VL+AC       +G +VH +  +    +      TAL+DMY+ 
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG-FDSDVVTGTALVDMYST 217

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
              ++ A              W+A+I+G   +    E + L+  M    +   + T  + 
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 312 LSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
             +C           + +  +K  +G +  +      +D+ A+   + +A    N  P
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVG--TATLDMYAKCDRMVDARKVFNTFP 333


>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
           scaffold0011:236494-238095 | 20130731
          Length = 533

 Score =  289 bits (740), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 174/526 (33%), Positives = 277/526 (52%), Gaps = 64/526 (12%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL------ 58
           ++++  QLHA IL+    +  +P   + + + AA S     NY    L +          
Sbjct: 16  SLTQLKQLHAHILRCHIQH--SPYALAPILSVAATS-----NYTSFFLYARSIFHNLTHR 68

Query: 59  --NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLK 116
             N++ +NTM+RAY  +  PTH   A+S +  ML+   +G+ A +N+TFP ++K C  L 
Sbjct: 69  NRNTFIHNTMIRAYLQNHSPTH---AVSCYTTMLQ---NGI-AVNNYTFPPLIKSCTALI 121

Query: 117 LARQ--------GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV 168
            A          G  +H  +   G  +D Y+++  I  YS  G+L  AR LFD+   +DV
Sbjct: 122 AASSKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDV 181

Query: 169 VSWTSLIDGL-----VDHDRPV--------------------------EAIELFGRMLEA 197
           V WT++IDG      V+  R +                          E ++LF  M   
Sbjct: 182 VLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSE 241

Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
           GV  ND+ +V+VL ACA  GAL+ G  VH   +   R+     ++TAL+DMY+K GC+ES
Sbjct: 242 GVRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVES 301

Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
           A              W AMISG+A +G  +++++LF +M  C  KP+E T  AVL+AC +
Sbjct: 302 ALSVFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETTFVAVLTACTH 361

Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN---AMPMKPDAV 374
           A +VRE   +F +M   YG+EP  +H+ CVVDLL+R+G ++EAE F+          DA 
Sbjct: 362 ARMVREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEEAERFIEEKMGGFAAGDAN 421

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           +W  ++ AC+++++     R+ K+ ++MGV D G+++L  N+Y   G  +    VR +++
Sbjct: 422 VWGAILNACRIYKNINVGNRVWKKLIDMGVADCGTHVLTYNIYREAGWDAEANRVRSMIS 481

Query: 435 KKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKL 480
           + G+ K PG S IEV   + EF+ GD +HP+A  +   LD ++  +
Sbjct: 482 EAGMKKKPGCSIIEVGNEVEEFLAGDQSHPQAQEMCRLLDSILKTV 527



 Score = 77.4 bits (189), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 142/345 (41%), Gaps = 52/345 (15%)

Query: 106 PFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM-----YSVFGDLGVARELF 160
           PF+           Q KQLH  I +       Y +  ++ +     Y+ F     AR +F
Sbjct: 5   PFLTTLAQNCNSLTQLKQLHAHILRCHIQHSPYALAPILSVAATSNYTSF--FLYARSIF 62

Query: 161 DRMP--DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD--- 215
             +   +R+     ++I   + +  P  A+  +  ML+ G+ VN+ T   ++++C     
Sbjct: 63  HNLTHRNRNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAVNNYTFPPLIKSCTALIA 122

Query: 216 -----SGALSMGRKVH----------------GIVK--------EKKRI------ECKCN 240
                + ++ +G  VH                G ++         K R+           
Sbjct: 123 ASSKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVV 182

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           + TA+ID Y K G +ESA              W+AM++  +     +E +DLFLEM++  
Sbjct: 183 LWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEG 242

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKK--RYGIEPTIQHFGCVVDLLARAGCLK 358
           V+P++  +  VL+AC +   + +   V S  ++  R    P +     +VD+ ++ GC++
Sbjct: 243 VRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILA--TALVDMYSKCGCVE 300

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
            A    + +  K D   W  +I    ++ D  ++  L +Q +  G
Sbjct: 301 SALSVFDGISDK-DVGAWNAMISGVALNGDARKSLELFQQMIVCG 344


>Medtr7g033400.1 | PPR containing protein | HC |
           chr7:12012362-12010888 | 20130731
          Length = 486

 Score =  285 bits (730), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 178/446 (39%), Positives = 257/446 (57%), Gaps = 13/446 (2%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           TT+    Q+HAQ++     N+      S+LF+  ALSP G+L +A  + +S    NS+ +
Sbjct: 50  TTIQHLKQIHAQMIITSRINDQFAT--SRLFSSFALSPFGNLEHASRIFSSLHKPNSFMW 107

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL-KLARQGK 122
           NT++RA+           +LSL+I M R   HGV  P   TFPF+LK C+ L  +    K
Sbjct: 108 NTLIRAHQQQQPHI----SLSLYIQMRR---HGV-IPGKHTFPFLLKACSSLSNVLPHCK 159

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           Q+H  + K G   DC++ N L+  YSV GDL  AR +FD +P +++  WT++I G   + 
Sbjct: 160 QVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNC 219

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              EA++LF RM+  G E N AT+ SVL  CA SG L +G ++H  ++ K  +E    + 
Sbjct: 220 CYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELGERIHEFMRVKG-VEVGVILG 278

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNV 301
           TAL+ MYAK+G I +A              W AMI GLASHG  ++A+ LF  M E   V
Sbjct: 279 TALVYMYAKNGDILTARKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIV 338

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
            P+  T   VLSAC +A L+     VF  MK  +GIEPTI+H+GC+VDLL R G L EAE
Sbjct: 339 VPNAVTFVGVLSACCHAGLIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAE 398

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           + +  MP KPD V+   L+ A K + +TE AER++KQ L +   + G ++  SN+YA  G
Sbjct: 399 EVIKGMPWKPDVVILGALLAASKNNGNTEVAERVVKQILTLDPHNHGVHVSLSNMYAEAG 458

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRI 447
           +W   + +R++M ++ L K PG S +
Sbjct: 459 QWQEVSRLRKMMKEEKLKKAPGWSLV 484


>Medtr3g080230.1 | PPR containing plant-like protein | HC |
           chr3:36292375-36290915 | 20130731
          Length = 486

 Score =  285 bits (728), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 167/456 (36%), Positives = 244/456 (53%), Gaps = 49/456 (10%)

Query: 30  FSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFM 89
             KLF FAA+SP GDL+YA  +    P   +++YNT++RA+S S+ P+      SLF   
Sbjct: 42  LGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFS----SLFFNR 97

Query: 90  LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV 149
           +RR +    APD F+F F+LK  +R         +HG + K GF    ++ NALIH+Y+V
Sbjct: 98  MRRNS---IAPDEFSFTFLLK--SRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAV 152

Query: 150 -----------------------------------FGDLGVARELFDRMPDRDVVSWTSL 174
                                               G+L VAR++FD MP+RDVVSWT +
Sbjct: 153 GGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIM 212

Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK- 233
           +       RP E ++LF  M  AGV  ++ TV+SV+ ACA+ G   MGR VH  V+E   
Sbjct: 213 LSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGF 272

Query: 234 -RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
             +   CN   +LIDMY K GC+E A              W AM+   A+HG  ++A  L
Sbjct: 273 GWMVALCN---SLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRL 329

Query: 293 FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
           F  M    V PD  T+ A+L A  +   V E   +F  M++ YG+EP I+H+G VVD+L 
Sbjct: 330 FEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLG 389

Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYIL 412
           R+G L+EA + + +MP+  + V+W  L+ AC++H D    ER++K+ LE+  D+ G YIL
Sbjct: 390 RSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELKPDEGGYYIL 449

Query: 413 ASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
             ++Y + G+ +   E+R+ M   G  K PG S +E
Sbjct: 450 LRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485


>Medtr3g080230.2 | PPR containing plant-like protein | HC |
           chr3:36292375-36290915 | 20130731
          Length = 486

 Score =  285 bits (728), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 167/456 (36%), Positives = 244/456 (53%), Gaps = 49/456 (10%)

Query: 30  FSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFM 89
             KLF FAA+SP GDL+YA  +    P   +++YNT++RA+S S+ P+      SLF   
Sbjct: 42  LGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFS----SLFFNR 97

Query: 90  LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV 149
           +RR +    APD F+F F+LK  +R         +HG + K GF    ++ NALIH+Y+V
Sbjct: 98  MRRNS---IAPDEFSFTFLLK--SRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAV 152

Query: 150 -----------------------------------FGDLGVARELFDRMPDRDVVSWTSL 174
                                               G+L VAR++FD MP+RDVVSWT +
Sbjct: 153 GGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIM 212

Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK- 233
           +       RP E ++LF  M  AGV  ++ TV+SV+ ACA+ G   MGR VH  V+E   
Sbjct: 213 LSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGF 272

Query: 234 -RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
             +   CN   +LIDMY K GC+E A              W AM+   A+HG  ++A  L
Sbjct: 273 GWMVALCN---SLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRL 329

Query: 293 FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
           F  M    V PD  T+ A+L A  +   V E   +F  M++ YG+EP I+H+G VVD+L 
Sbjct: 330 FEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLG 389

Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYIL 412
           R+G L+EA + + +MP+  + V+W  L+ AC++H D    ER++K+ LE+  D+ G YIL
Sbjct: 390 RSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELKPDEGGYYIL 449

Query: 413 ASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
             ++Y + G+ +   E+R+ M   G  K PG S +E
Sbjct: 450 LRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485


>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:49468862-49466962 | 20130731
          Length = 589

 Score =  281 bits (719), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 185/599 (30%), Positives = 292/599 (48%), Gaps = 43/599 (7%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLL--------LTSNPA 57
           + ++L  H ++       N    N  K  TF  L PS    +A ++         T+N  
Sbjct: 6   LVKSLSRHHKLTLFSFHTNTNAHNIGKFHTFNHL-PSATPTHANVVKSGLSNDTFTTNNL 64

Query: 58  LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP---------------APDN 102
           +NSY     +       D   H + +S  + M      G P                P+ 
Sbjct: 65  INSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQPNIALCLFHQMQGTLVMPNE 124

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           FTF  ++  C+ L     G+++H  +   G+ SD  + ++LI MY     +  A+ +FD 
Sbjct: 125 FTFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQMIFDF 184

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV-EVNDATVVSVLRACADSGALSM 221
           M  R+VVSWTS+I     + +   A++LF       + + N   + S + ACA  G L  
Sbjct: 185 MWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVTACASLGRLGS 244

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
           G+  HG+V      +    V++AL+DMYAK GC+  +              +T+MI G A
Sbjct: 245 GKITHGVVIRLGH-DASDVVASALVDMYAKCGCVTYSDKVFRRIVNPSVVPYTSMIVGAA 303

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
            +GL   ++ LF EM    +KP+  T   VL              +F+ M ++YG+ P  
Sbjct: 304 KYGLGTLSLRLFQEMVDRRIKPNSITFVGVLH-------------LFNSMNEKYGVMPDA 350

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPM--KPDAVLWRTLIWACKVHEDTERAERLMKQH 399
           +H+ C+VD+L R G + EA     ++ +  + DA+LW TL+ A ++H   + A     + 
Sbjct: 351 RHYTCIVDMLGRVGRIDEAYQLAQSVQVGSEDDALLWGTLLSASRLHGRVDIAIEASNRV 410

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           +E     + +Y+  SN YA  G W N   +R  M + G+ K PGSS IE+  + + F  G
Sbjct: 411 IESNQQVAAAYVTLSNTYALAGDWENAHNLRSEMKRTGVYKEPGSSWIEIKDSTYLFHAG 470

Query: 460 DYNH-PEADNIFVKLDEMVDKLKKEGY-NPKLSEVLLEIDDEEKATQLLHHSEKLALAYG 517
           D +   +   +   L E+  ++K+ G+       V +++++E K   +  HSEKLALA+G
Sbjct: 471 DLSKCSQKRELLSLLRELEGRMKERGHVGVTTGLVFVDVEEEAKEEIVSLHSEKLALAFG 530

Query: 518 LIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           L+ T +G  I I+KNLR C DCHE  KLIS I +R+ +VRD  RFHHFKNG C+C D+W
Sbjct: 531 LLNTPKGITIIIMKNLRMCRDCHEAFKLISDIVEREFVVRDVNRFHHFKNGSCTCGDFW 589


>Medtr5g043920.1 | PPR containing plant-like protein | HC |
           chr5:19295539-19293687 | 20130731
          Length = 498

 Score =  281 bits (718), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/486 (34%), Positives = 272/486 (55%), Gaps = 21/486 (4%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLL---TSNPALNSY 61
           ++++  QL AQI  L + +ND     S+L  F +LSP  +L++AR L+   ++NP+  S+
Sbjct: 22  SITKLHQLQAQI-HLNSLHNDT-HILSQLVYFFSLSPFKNLSHARKLVFHFSNNPSPISW 79

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
             N ++R Y+ S  P       S+++F   R  +GV  P+  T+PF+ K CA   +  +G
Sbjct: 80  --NILIRGYASSDSPIE-----SIWVFKKMR-ENGVK-PNKLTYPFIFKSCAMALVLCEG 130

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           KQ+H  + K G  SD Y+ N +I+ Y     +  AR++FD M  R +VSW S++   V++
Sbjct: 131 KQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVEN 190

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
               + I  F +M +   E ++ ++V +L  CA+ G LS+GR VH  +  K  +    ++
Sbjct: 191 VWLSDGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMV-LSVHL 249

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM---ET 298
            TAL+DMY KSG +  A              W+AMI GLA HG  +EA+ LF  M   ++
Sbjct: 250 GTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKS 309

Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
            N+ P+  T   VL AC +A +V E +  F DM+  +GI+P + H+G +VD+L RAG L 
Sbjct: 310 NNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLG 369

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER---AERLMKQHLEMGVDDSGSYILASN 415
           EA  F+ +MP  PD ++WRTL+ AC VH+  +R    +++ K+ LEM     G+ ++ +N
Sbjct: 370 EAYRFIQSMPFAPDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVAN 429

Query: 416 VYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDE 475
           +YA VG W   A VR +M   GL K  G S +++ G+++ F  G  + P+   ++  LD 
Sbjct: 430 MYAEVGNWEKAANVRRVMRDGGLKKMAGESCVDLGGSMYRFFAGHDSRPDLMPVYDLLDA 489

Query: 476 MVDKLK 481
           +   LK
Sbjct: 490 LNLHLK 495


>Medtr4g007160.1 | PPR containing plant-like protein | HC |
           chr4:976511-978646 | 20130731
          Length = 595

 Score =  281 bits (718), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 222/393 (56%), Gaps = 2/393 (0%)

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
           AP+  TF  +L  C +L     GK +HG ++K   G +  + N L+ MY     +  A+ 
Sbjct: 204 APNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKR 263

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           LFD +P++D+VSWTS+I GLV +  P E+++LF  ML +G E +   + SVL ACA  G 
Sbjct: 264 LFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGL 323

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           L  GR VH  + +  RI+   ++ T+LIDMYAK GCIE A              W A I 
Sbjct: 324 LDYGRWVHEYI-DHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIG 382

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR-YGI 337
           GLA +G  +EA+  F  +     +P+E T  AV SAC ++ LV E    F  M    Y +
Sbjct: 383 GLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNL 442

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
            P ++H+GC+VDLL RA  ++EA + +N MPM PD  +   L+ A   + + E    ++K
Sbjct: 443 SPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNVELTPEMLK 502

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFV 457
                   +SG Y+L SN YA+  KW+    VR LM +KG+ K PGSS I VDG  H+FV
Sbjct: 503 TVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFV 562

Query: 458 MGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLS 490
           +GD NHP++++I V L+ + ++   EG+   LS
Sbjct: 563 VGDNNHPQSEDIHVLLNILANQTYLEGHIDTLS 595



 Score =  168 bits (426), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 35/403 (8%)

Query: 11  QLHAQILKLGTSNND-----APRNFSKLFTFAALSPSGDLNY-ARLLLTSNPALNSYYYN 64
           Q+HAQ+L+    +ND     A   F K  T        D+ Y    L   + + +S+  N
Sbjct: 27  QIHAQLLRSTLVDNDLVVTKAANFFGKHVT--------DIRYPCNFLKQFDWSFSSFPCN 78

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
            ++  Y   + P   + A+ ++ +++         PD +T P VLK CAR     + KQ+
Sbjct: 79  LIISGYGAGNFP---WAAIRIYRWVVGNGF----VPDVYTVPAVLKSCARFSGIAEVKQI 131

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           H    K     D ++ N+ +H+YS+ GD   A ++FD MP RDVVSWT LI G +     
Sbjct: 132 HTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLF 191

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
            +A+ LF RM    V  N AT VS+L AC   G L++G+ +HG+V +    + +  VS  
Sbjct: 192 NDAVALFLRM---DVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGK-ELVVSNT 247

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           L+DMY K   +  A              WT+MISGL  +   +E++DLF EM     +PD
Sbjct: 248 LMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPD 307

Query: 305 ERTMTAVLSACRNADLV---REAYMVFSDMKKRYGIEPTIQHFGC-VVDLLARAGCLKEA 360
              +T+VLSAC +  L+   R  +      + ++ +     H G  ++D+ A+ GC++ A
Sbjct: 308 GVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDV-----HIGTSLIDMYAKCGCIEMA 362

Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +   N +P K +   W   I    ++   + A +     +E G
Sbjct: 363 QQMFNLLPSK-NIRTWNAYIGGLAINGHGQEALKQFGYLVESG 404


>Medtr2g036960.1 | PPR containing plant-like protein | HC |
           chr2:16044626-16048085 | 20130731
          Length = 702

 Score =  279 bits (713), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 170/475 (35%), Positives = 253/475 (53%), Gaps = 13/475 (2%)

Query: 13  HAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSL 72
           H ++ KLG  N+    N      F      G+   AR +       +   +N++L  Y+ 
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRC----GENGVARKVFDEITEKDLVSWNSLLSGYAK 195

Query: 73  SSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMG 132
                  F   ++ +F   R   G   PD  +   VL  C  L     G+ + GF+ + G
Sbjct: 196 LG-----FAREAVEVFGRLREESGFE-PDEMSLVSVLGACGELGDLELGRWVEGFVVERG 249

Query: 133 FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
              + YI +ALI MYS  G+L  +R +FD MP RD ++W + I     +    EAI LF 
Sbjct: 250 MKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFH 309

Query: 193 RMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKS 252
            M E GV+ N  T+ +VL ACA  GAL +G+++      +  ++    V+TALIDMYAK 
Sbjct: 310 SMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRG-LQHDIFVATALIDMYAKC 368

Query: 253 GCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM--ETCNVKPDERTMTA 310
           G +ESA              W AMIS LASHG  KEA+ LF  M  E  + +P++ T  +
Sbjct: 369 GSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVS 428

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           +LSAC +A LV E Y +F  M   +G+ P I+H+ C+VDLL+RAG L EA D +  MP K
Sbjct: 429 LLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
           PD V    L  AC+  ++ +  ER+++  LE+   +SG+YI++S +Y ++  W + A +R
Sbjct: 489 PDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMR 548

Query: 431 ELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
            LM + G+ K PG S IEV   L EF+ GD    ++ ++   +D + ++LKKEGY
Sbjct: 549 ALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELKKEGY 603



 Score =  192 bits (487), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 195/365 (53%), Gaps = 17/365 (4%)

Query: 44  DLNYARLLLTS-NPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           D  Y+ L+ +   P  N Y +N MLRA    +  T H + L+L ++   +  +   +P+N
Sbjct: 64  DFTYSTLIFSHITPHPNDYAFNIMLRA----TTTTWHDYPLTLHLYHQMKTLN--ISPNN 117

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           FTFPFV   CA L+  R  +  H  + K+G  +D + +N+++ MY   G+ GVAR++FD 
Sbjct: 118 FTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDE 177

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVEVNDATVVSVLRACADSGALSM 221
           + ++D+VSW SL+ G        EA+E+FGR+  E+G E ++ ++VSVL AC + G L +
Sbjct: 178 ITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLEL 237

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
           GR V G V E+  ++    + +ALI MY+K G + S+              W A IS  A
Sbjct: 238 GRWVEGFVVERG-MKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYA 296

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA---DLVREAYMVFSDMKKRYGIE 338
            +G+  EAI LF  M+   V P++ T+TAVLSAC +    DL ++      +     G++
Sbjct: 297 QNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQ----MDEYATHRGLQ 352

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
             I     ++D+ A+ G L+ A+   N MP K DA  W  +I A   H   + A  L ++
Sbjct: 353 HDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDAS-WNAMISALASHGKAKEALSLFER 411

Query: 399 HLEMG 403
             + G
Sbjct: 412 MSDEG 416


>Medtr5g043780.1 | PPR containing plant-like protein | HC |
           chr5:19239453-19241320 | 20130731
          Length = 525

 Score =  273 bits (698), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 172/510 (33%), Positives = 256/510 (50%), Gaps = 47/510 (9%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLL--TSNPALNSYY 62
           +M    Q HAQ+   G  NN    +    F  +       L YA  +     NP +    
Sbjct: 17  SMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQNPTVC--I 74

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           YNT+++A+ +++       AL +F+ ML+        PDN+T P+VLK C        GK
Sbjct: 75  YNTLIKAFLVNNKFKS---ALQVFVKMLQSEL----KPDNYTIPYVLKACGTFHDCSFGK 127

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL---- 178
            +HG+ +K+G   D Y+ N+L+ MY VFGD+  AR +FD +P  +VVSW+ +I G     
Sbjct: 128 MIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVG 187

Query: 179 -VDHDRPV--------------------------EAIELFGRMLEAGVEVNDATVVSVLR 211
            VD  R                            E++ LF  M    +  +++  VS+L 
Sbjct: 188 DVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILS 247

Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX 271
           ACA  GAL +G  +H  + + K +     +ST+L+DMYAK G +E A             
Sbjct: 248 ACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVV 307

Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
            W AMISG+A HG  K A+ LF +ME   VKPD+ T  AV +AC  + +  E  M+   M
Sbjct: 308 CWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKM 367

Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEA----EDFMNAMPMKPDAVLWRTLIWACKVHE 387
              Y I P  +H+GC+VDLL+RAG  +EA        N+     + + WR  + AC  H 
Sbjct: 368 CSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHG 427

Query: 388 DTERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
           +T+ AE   ++ L++     SG Y+L SN+YA+ GK S+   VR++M  KG  K PG S 
Sbjct: 428 ETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSS 487

Query: 447 IEVDGALHEFVMGDYNHPEADNIFVKLDEM 476
           +E+DG + EF+ G+  HP+ + I   L +M
Sbjct: 488 VEIDGVISEFIAGEKTHPQMEEIHSVLKKM 517


>Medtr4g023510.1 | PPR containing plant-like protein | HC |
           chr4:7953334-7955464 | 20130731
          Length = 494

 Score =  271 bits (693), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/420 (36%), Positives = 230/420 (54%), Gaps = 39/420 (9%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N ++R+YSLS  P     +L  F   L   TH + + D+FT  F+   CA L     G 
Sbjct: 79  FNNLIRSYSLSLFPHE---SLKFFTHTLNNLTHSL-SLDSFTLTFLAHACANLDTTHFGF 134

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYS----------VFGD-------------------- 152
            LH  + KMGF +  ++   L+HMYS          VFG+                    
Sbjct: 135 HLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWG 194

Query: 153 -LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVL 210
            L  AR +FDRM  R VVSWT +IDG    ++P++A+ LF +M+E  G+E N+ T+++V 
Sbjct: 195 QLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVF 254

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX--XX 268
            A A  G + M   VHG V+++        +  ALID+YAK GCIESA            
Sbjct: 255 PAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRR 314

Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
               W +++SG A+ G+ +EA+D F +ME   V+P+     ++LSAC ++ LV E    F
Sbjct: 315 NSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFF 374

Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK-PDAVLWRTLIWACKVHE 387
             M   YG+ P I+H+GCV+D+L RAG L EAE     +P +  + V+WRTL+ AC VH+
Sbjct: 375 GKMVNDYGLVPDIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHD 434

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
           + E  +R+ K+ LEM     G Y+L SN++ASVG++ +   +RE+++K+ + K PG S +
Sbjct: 435 NVEIGKRVTKKILEMEKGHGGDYVLMSNIFASVGRFKDVERLREMIDKRNVFKLPGYSIV 494


>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:15020896-15019352 | 20130731
          Length = 514

 Score =  270 bits (690), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 152/430 (35%), Positives = 231/430 (53%), Gaps = 12/430 (2%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF-------GSDCYIMNALIHMYSVFGD 152
           P+  T   +L  CA +     GK+ H +  K            D   +NALI MY+    
Sbjct: 84  PNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKS 143

Query: 153 LGVARELFDRM--PDRDVVSWTSLIDGLVDHDRPVEAIELFGRML--EAGVEVNDATVVS 208
           L VAR +FD +   DRDVV+WT +I G   +     A++LF  M   +  +  ND T+  
Sbjct: 144 LEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISC 203

Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKC-NVSTALIDMYAKSGCIESAXXXXXXXXX 267
           VL ACA   AL  G+++H  V  + RI+     V+  LIDMY+KSG +++A         
Sbjct: 204 VLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK 263

Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
                WT++++G   HG  ++A  +F EM    +  D  T   VL AC ++ +V     +
Sbjct: 264 RNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDL 323

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           F  M K + ++P ++H+ C+ DL  RAG L EA   +N M M+P  V+W  L+ AC+ H 
Sbjct: 324 FYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHS 383

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
           + E AE   K+ LE+  D+ G+Y L SN+YA+  +W + A +R LM + G+ K PG S +
Sbjct: 384 NVELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWV 443

Query: 448 EVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLH 507
           +    +  F +GD  H ++  I+  L +++ ++K  GY P+ +  L ++DDEEK  QLL 
Sbjct: 444 QGRKGMETFYVGDRTHSQSQKIYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLLE 503

Query: 508 HSEKLALAYG 517
           HSEKLALAY 
Sbjct: 504 HSEKLALAYA 513



 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 18/279 (6%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEAIELF 191
           D    NA++  YS  G    A  LF +M +     DVV+W+S+I G        EA+++F
Sbjct: 15  DVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVF 74

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-----IVK-EKKRIECKCNVSTAL 245
            +M       N  T++S+L  CA  GAL  G++ H      I+K E            AL
Sbjct: 75  RQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINAL 134

Query: 246 IDMYAKSGCIESAXXXXXXX--XXXXXXXWTAMISGLASHGLCKEAIDLFLEM---ETCN 300
           IDMYAK   +E A                WT MI G A +G    A+ LF EM   + C 
Sbjct: 135 IDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCI 194

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG-CVVDLLARAGCLKE 359
           V P++ T++ VL AC     +R    + + + +R  I+  +     C++D+ +++G +  
Sbjct: 195 V-PNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDT 253

Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
           A+   ++M  K +A+ W +L+    +H  +E A R+  +
Sbjct: 254 AQVVFDSMS-KRNAISWTSLLTGYGMHGCSEDAFRVFDE 291


>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:15028593-15026470 | 20130731
          Length = 571

 Score =  270 bits (689), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/429 (35%), Positives = 231/429 (53%), Gaps = 12/429 (2%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF-------GSDCYIMNALIHMYSVFGD 152
           P+  T   +L  CA +     GK+ H +  K            D   +NALI MY+    
Sbjct: 141 PNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKS 200

Query: 153 LGVARELFDRM--PDRDVVSWTSLIDGLVDHDRPVEAIELFGRML--EAGVEVNDATVVS 208
           L VAR +FD +   DRDVV+WT +I G   +     A++LF  M   +  +  ND T+  
Sbjct: 201 LEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISC 260

Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKC-NVSTALIDMYAKSGCIESAXXXXXXXXX 267
           VL ACA   AL  G+++H  V  + RI+     V+  LIDMY+KSG +++A         
Sbjct: 261 VLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK 320

Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
                WT++++G   HG  ++A  +F EM    +  D  T   VL AC ++ +V     +
Sbjct: 321 RNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDL 380

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           F  M K + ++P ++H+ C+ DL  RAG L EA   +N M M+P  V+W  L+ AC+ H 
Sbjct: 381 FYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHS 440

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
           + E AE   K+ LE+  D+ G+Y L SN+YA+  +W + A +R LM + G+ K PG S +
Sbjct: 441 NVELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWV 500

Query: 448 EVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLH 507
           +    +  F +GD  H ++  I+  L +++ ++K  GY P+ +  L ++DDEEK  QLL 
Sbjct: 501 QGRKGMETFYVGDRTHSQSQKIYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLLE 560

Query: 508 HSEKLALAY 516
           HSEKLALAY
Sbjct: 561 HSEKLALAY 569



 Score = 96.3 bits (238), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 49/311 (15%)

Query: 135 SDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM 194
           S  ++ NAL+ MY+  G +  A ++++RM  +DVV+W +++ G   + R  +A+ LFG+M
Sbjct: 40  SGFFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKM 99

Query: 195 LEAGVEV-----------------------------------NDATVVSVLRACADSGAL 219
            E  +E+                                   N  T++S+L  CA  GAL
Sbjct: 100 REERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGAL 159

Query: 220 SMGRKVHG-----IVK-EKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX--XXXXXX 271
             G++ H      I+K E            ALIDMYAK   +E A               
Sbjct: 160 LHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVV 219

Query: 272 XWTAMISGLASHGLCKEAIDLFLEM---ETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
            WT MI G A +G    A+ LF EM   + C V P++ T++ VL AC     +R    + 
Sbjct: 220 TWTVMIGGYAQYGDANHALQLFSEMFKFDNCIV-PNDFTISCVLMACARLAALRFGKQIH 278

Query: 329 SDMKKRYGIEPTIQHFG-CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           + + +R  I+  +     C++D+ +++G +  A+   ++M  K +A+ W +L+    +H 
Sbjct: 279 AYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLLTGYGMHG 337

Query: 388 DTERAERLMKQ 398
            +E A R+  +
Sbjct: 338 CSEDAFRVFDE 348


>Medtr8g087980.1 | PPR containing plant-like protein | HC |
           chr8:36412954-36411351 | 20130731
          Length = 515

 Score =  268 bits (686), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 167/493 (33%), Positives = 261/493 (52%), Gaps = 53/493 (10%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNF--SKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           M +  Q+HA  +    +NN    ++  S++  F ALSP GD  YA  L T  P  N + Y
Sbjct: 1   MKQTKQIHAHAI----TNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDY 56

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N+++ +Y+ +S     FH L  F+F     T+    P++ TF  ++K C  L    Q   
Sbjct: 57  NSIITSYTTNS----QFHKL-FFVFTKMLNTN--IRPNSHTFTTLVKACVSLSSLEQVFT 109

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG-----L 178
           L     K+G  SD Y ++++I+ +S    + +AR++FD   +R+VV WTSL+ G     L
Sbjct: 110 LS---MKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGL 166

Query: 179 VDHDRPV--------------------------EAIELFGRMLE-----AGVEVNDATVV 207
           V+  R V                          E ++LF  + +     A ++ N A +V
Sbjct: 167 VNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLV 226

Query: 208 SVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXX 267
           SVL AC   GA   G+ +H  V+E   +E    + TALID Y K G ++ A         
Sbjct: 227 SVLNACTMVGAFEEGKWIHSYVEENG-LEYDLELGTALIDFYMKCGWVKGAEKVFNKMPV 285

Query: 268 XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMV 327
                W+AMI GLA +G  K A++LF +ME    KP+E T   VL+AC +  L  E+  +
Sbjct: 286 KDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARL 345

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           F  M ++Y I P+I+H+GCVVD+LAR+G +K+A  F+N+M ++PD  +W +L+  C +H 
Sbjct: 346 FGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHG 405

Query: 388 DTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
             E  +++ K  +E     SG Y+L +N+YA++GKW   +EVR+LM  +G++   G S I
Sbjct: 406 HYELGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFI 465

Query: 448 EVDGALHEFVMGD 460
           E+D  +H+F   D
Sbjct: 466 EIDQTIHKFFADD 478


>Medtr1g040000.1 | PPR containing plant-like protein | HC |
           chr1:14632880-14635263 | 20130731
          Length = 526

 Score =  267 bits (682), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 173/489 (35%), Positives = 252/489 (51%), Gaps = 43/489 (8%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           TT++   Q H  ILK     ND   N S+     A       +Y+      N     + Y
Sbjct: 24  TTLTHLQQTHTFILKHALFQNDI--NLSRFIHKTASLNYPSYSYSIFTFNHNRPFPIFVY 81

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N ++ A   S+       A+S+F  + R       + D+++ P+VLK    L     GKQ
Sbjct: 82  NNIIYALYSSNAKL----AVSIFRSVRRLGL----SFDSYSLPYVLKSVVCLNDFGLGKQ 133

Query: 124 LH--GFITKMG---------------------------FGSDCYIMNALIHMYSVFGDLG 154
           +H  G +T +                            FG +  ++NA+I  Y   GD+ 
Sbjct: 134 IHCVGVVTGLDKNVSVCSSLIQMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVS 193

Query: 155 VARELFDRM--PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRA 212
            AR+LFD M   D+DV SWT++I G      P EAI+LF RM    V+ ++  +++VL A
Sbjct: 194 NARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSA 253

Query: 213 CADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
           CAD GAL +G  +H  + EK ++     +  +LIDMYAKSG I  A              
Sbjct: 254 CADLGALHLGEWIHNYI-EKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIIT 312

Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAYMVFSDM 331
           WT MI+GLA HGL KEA+ +F  ME  + VKP+E T  A+LSAC +  LV      F+ M
Sbjct: 313 WTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSM 372

Query: 332 KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTER 391
           + RYGIEP I+H+GC++DLL RAG L+EA++ +  MP + +A +W +L+ A     D E 
Sbjct: 373 RSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAEL 432

Query: 392 AERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDG 451
           AE  ++    +     G+Y L SN YAS+G+W+    VR++M   G+ K PG S IEV+ 
Sbjct: 433 AEEALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNN 492

Query: 452 ALHEFVMGD 460
            ++EF+ GD
Sbjct: 493 IVYEFIAGD 501


>Medtr2g087120.1 | PPR containing plant-like protein | HC |
           chr2:36618951-36617398 | 20130731
          Length = 517

 Score =  266 bits (681), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 176/520 (33%), Positives = 261/520 (50%), Gaps = 55/520 (10%)

Query: 21  TSNNDAPRNFSKLFTFAALSPSGDLNYARLL-LTSNPALNSYYYNTMLRAYSLSSDPTHH 79
           T + D P+   ++   +  SP  + N  + L L   P  N        +  S +S  +HH
Sbjct: 11  THHPDPPKQPPQIHPPSTFSPPNNPNKNQTLSLKHKPNSN--------QTVSWTSSISHH 62

Query: 80  ------FHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ---GKQLHGFITK 130
                   A S FI ML         P++ T   +L  CA          G  LH    K
Sbjct: 63  CKNNNFLKAASEFIQMLEAEVE----PNHITLITLLSACAHSPSKTSITFGAALHTHAFK 118

Query: 131 MGFG-SDCYIMNALIHMYS----------VFGDLGV---------------------ARE 158
            GF  +D  +  ALI MY+          VF  +GV                     A +
Sbjct: 119 HGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALK 178

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           LFD++P ++VVSWT +I G V  +   EA+E F  M  AGV  +  TV++++ ACA+ GA
Sbjct: 179 LFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGA 238

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           L +G  VH +V  KK       V  +LIDMYA+ GCIE A              W ++I 
Sbjct: 239 LGLGLWVHRLVM-KKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIV 297

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
           G A +GL  +A+  F  M+   ++P+  + T+ L+AC +A L+ E   +F+D+K+ +   
Sbjct: 298 GFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNS 357

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
           P I+H+GC+VDL +RAG LKEA D +  MPM P+ V+  +L+ AC+   D E AE++MK 
Sbjct: 358 PRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKY 417

Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVM 458
            +E+      +Y+L SN+YA+VGKW   ++VR  M ++GL K    S IE+D  +H+FV 
Sbjct: 418 QVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVS 477

Query: 459 GDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDD 498
           GD  H E D I+  L+ +  +L   GY P  S    ++DD
Sbjct: 478 GDKYHEENDYIYSALELLSFELHLYGYVPDFSGKESDVDD 517


>Medtr5g018690.1 | PPR containing protein | HC |
           chr5:6968759-6971652 | 20130731
          Length = 663

 Score =  265 bits (678), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 160/508 (31%), Positives = 257/508 (50%), Gaps = 43/508 (8%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
           +HAQ  KLG  ++   +N + L  + A    G +  AR +           +N+M+  YS
Sbjct: 156 VHAQSFKLGMGSHACVQN-AILNIYVA---CGLITSARRVFDDISERTLVSWNSMINGYS 211

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
                          + M R        PD FT   +L    +      G+ +H  +   
Sbjct: 212 KMGRSEEA-------VLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVT 264

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID-----GLVD------ 180
           G   D  + NAL+ MY+  G+L  A+ +FD+M D+DVVSWT +I+     GL+D      
Sbjct: 265 GIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFF 324

Query: 181 HDRP--------------------VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           +  P                     EA++LF RM ++GV  ND T+V++L +C+  G L+
Sbjct: 325 NQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLA 384

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
           +G++ H  + +   I     +  A+IDMYAK G +++A              W  +I  L
Sbjct: 385 LGKQAHSYIFDN-NITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGAL 443

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           A HG  KEAI++F +M+   V PDE T T +LSAC ++ LV      F  M   +GI P 
Sbjct: 444 ALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPD 503

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
           ++H+ C+VDLL R G L EA   +  MP+KPD V+W  L+ AC+ + +    +++MKQ L
Sbjct: 504 VEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLL 563

Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
           E+G  +SG Y+L SN+Y+   +W +   + +++++ G+ K    S IE+DG  ++F++ D
Sbjct: 564 ELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDD 623

Query: 461 YNHPEADNIFVKLDEMVDKLKKEGYNPK 488
             H  + +I+  L +++D LK  GY  K
Sbjct: 624 KRHGASTSIYSMLGQLMDHLKSAGYPCK 651



 Score =  163 bits (412), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 197/441 (44%), Gaps = 59/441 (13%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSG----DLNYARLLLTSNPA 57
           +  ++ +   +HAQI+  G +        +++ T   L  S     DL YA  L    P 
Sbjct: 45  QCISLKQLKHVHAQIILHGLA--------TQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQ 96

Query: 58  LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL 117
            N + +N +++ YS SSDP       SL ++  RR       P+ FT PFVLK CA    
Sbjct: 97  PNKFMFNHLIKGYSNSSDPIK-----SLLLY--RRMVCDGILPNQFTIPFVLKACAAKSC 149

Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
              G  +H    K+G GS   + NA++++Y   G +  AR +FD + +R +VSW S+I+G
Sbjct: 150 YWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMING 209

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
                R  EA+ +F  M E G+E +  T+V +L      G   +GR VH +      IE 
Sbjct: 210 YSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVH-LHMVVTGIEI 268

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC----------- 286
              V+ AL+DMYAK G ++ A              WT MI+  A+HGL            
Sbjct: 269 DSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMP 328

Query: 287 --------------------KEAIDLFLEMETCNVKPDERTMTAVLSACRN-ADLV--RE 323
                                EA+DLF  M    V  ++ T+ A+LS+C +  DL   ++
Sbjct: 329 GKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQ 388

Query: 324 AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
           A+    D      I  +      ++D+ A+ G L+ A D    MP K +AV W  +I A 
Sbjct: 389 AHSYIFDNN----ITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEK-NAVSWNVIIGAL 443

Query: 384 KVHEDTERAERLMKQHLEMGV 404
            +H   + A  + ++    GV
Sbjct: 444 ALHGYGKEAIEMFEKMQASGV 464



 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 142/328 (43%), Gaps = 43/328 (13%)

Query: 90  LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV 149
           L+ PTH        T  +++  C  LK   Q K +H  I   G  +    +  L+     
Sbjct: 31  LKSPTHQ-------TLHYLIDQCISLK---QLKHVHAQIILHGLATQVLTLGKLVSSSVQ 80

Query: 150 FGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
             DL  A +LFD++P  +   +  LI G  +   P++++ L+ RM+  G+  N  T+  V
Sbjct: 81  LRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFV 140

Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX 269
           L+ACA      +G  VH    +       C V  A++++Y   G I SA           
Sbjct: 141 LKACAAKSCYWLGVCVHAQSFKLGMGSHAC-VQNAILNIYVACGLITSARRVFDDISERT 199

Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVR--EA 324
              W +MI+G +  G  +EA+ +F EM+   ++PD  T+  +LS      N DL R    
Sbjct: 200 LVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHL 259

Query: 325 YMVFS-------------DMKKRYG------------IEPTIQHFGCVVDLLARAGCLKE 359
           +MV +             DM  + G            ++  +  + C+++  A  G +  
Sbjct: 260 HMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDC 319

Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHE 387
           A +F N MP K + V W ++IW C V E
Sbjct: 320 ALEFFNQMPGK-NVVSWNSIIW-CHVQE 345


>Medtr4g131300.1 | PPR containing plant-like protein | HC |
           chr4:54775340-54772788 | 20130731
          Length = 734

 Score =  265 bits (676), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/452 (34%), Positives = 248/452 (54%), Gaps = 14/452 (3%)

Query: 59  NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           NS  ++ M+  Y+   D      AL LF  M    + GV  P  FT   V+  C+ L   
Sbjct: 284 NSITWSAMVTGYAQGGDSDK---ALKLFNKM---HSSGV-LPSEFTLVGVINACSDLCAV 336

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
            +GKQ+H F  K+GFG   Y+++A++ MY+  G L  AR+ F+ +   DVV WTS+I G 
Sbjct: 337 VEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGY 396

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIEC 237
           V +      + L+G+M    V  N+ T+ SVLRAC+   AL  G+++H  I+K   ++E 
Sbjct: 397 VQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEV 456

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
              + +AL  MY K G ++                W AMISGL+ +G   +A++LF +M 
Sbjct: 457 P--IGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKML 514

Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
              +KPD  T   +LSAC +  LV   +  F  M   + I P ++H+ C+VD+L+RAG L
Sbjct: 515 LEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKL 574

Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVY 417
            EA++F+ +  +     LWR L+ ACK H + E      ++ +E+G  +S +Y+L S++Y
Sbjct: 575 NEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIY 634

Query: 418 ASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMV 477
            ++G   N   VR +M  +G+ K PG S IE+ G +H FV+GD  HP+ D I ++L+ + 
Sbjct: 635 TALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLT 694

Query: 478 DKLKKEGYNP---KLSEVLLE-IDDEEKATQL 505
             +  EGY P   +L E +++ + D+E + ++
Sbjct: 695 KLMIDEGYQPLLDRLPETVIDNLTDQEGSDEI 726



 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 192/404 (47%), Gaps = 25/404 (6%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAAL-SPSGDLNYARLLLTS--NPALNSYYYNTMLR 68
           LHA+ILK G+ ++    N     TF  L + +  L++A  L  S  +   +   +N+++ 
Sbjct: 33  LHARILKTGSISSIYVTN-----TFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLIN 87

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
           A+S +   +    A+SLF  M+R        P+  T   V    + L     GKQ H   
Sbjct: 88  AFSQNHSSSSSSFAISLFRRMMRANN---VIPNAHTLAGVFSAASNLSDVVAGKQAHSVA 144

Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
            K G   D Y+ ++L++MY   G +  AR+LFDRMP+R+ VSW ++I G    D   +A+
Sbjct: 145 VKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAV 204

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
           E+F  M       N+  + SVL A      +  GR+VH +   K  +    +V+ AL+ M
Sbjct: 205 EVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAI-KNGLLAIVSVANALVTM 263

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK G ++ A              W+AM++G A  G   +A+ LF +M +  V P E T+
Sbjct: 264 YAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTL 323

Query: 309 TAVLSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
             V++AC +   V E   + S   K  +G++  +     VVD+ A+ G L +A      +
Sbjct: 324 VGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYV--LSAVVDMYAKCGSLADARKGFECV 381

Query: 368 PMKPDAVLWRTLIWACKVHEDTE---------RAERLMKQHLEM 402
             +PD VLW ++I     + D E         + ER++   L M
Sbjct: 382 -QQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTM 424



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 9/299 (3%)

Query: 112 CARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM--PDRDVV 169
           C   K   +G+ LH  I K G  S  Y+ N  +++Y+    L  A  LFD +   D+D V
Sbjct: 21  CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80

Query: 170 SWTSLIDGLVDHDRPVE---AIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKV 225
           SW SLI+    +        AI LF RM+ A   + +A T+  V  A ++   +  G++ 
Sbjct: 81  SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140

Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
           H  V  K        V ++L++MY K+G +  A              W  MISG AS  +
Sbjct: 141 HS-VAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDI 199

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
             +A+++F  M       +E  +T+VLSA  +   V     V S +  + G+   +    
Sbjct: 200 ADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS-LAIKNGLLAIVSVAN 258

Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
            +V + A+ G L +A         K +++ W  ++       D+++A +L  +    GV
Sbjct: 259 ALVTMYAKCGSLDDAVRTFEFSGDK-NSITWSAMVTGYAQGGDSDKALKLFNKMHSSGV 316


>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:28350546-28353833 | 20130731
          Length = 770

 Score =  265 bits (676), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/488 (31%), Positives = 253/488 (51%), Gaps = 17/488 (3%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P+ +T    L  C  +K    G Q+H   TK+G+ S+  + N+L+++Y   G +  A+ L
Sbjct: 282 PNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRL 341

Query: 160 FDRMPDRDVVSWTSLI-----------DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
           F  M D ++V+W ++I           D L  + + +EA+ LF ++  +G++ +  T  S
Sbjct: 342 FKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSS 401

Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX 268
           VL  C+   AL  G ++H     K        V +++I+MY K G IE A          
Sbjct: 402 VLSVCSKMMALEQGEQIHARTI-KTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIR 460

Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
               WT MI+G A HG  K+A++LF +M+   ++P+  T   VLSAC +A +V EA+  F
Sbjct: 461 TMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYF 520

Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
             M+K Y I+P + H+ C+VD+L R G ++EA D +  M  K    +W  LI  C    +
Sbjct: 521 EIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGN 580

Query: 389 TERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
            E      ++ L +   D+ +Y L  N Y S G++ + + V  +M ++ + +    S I 
Sbjct: 581 LELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWIS 640

Query: 449 VDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQ--LL 506
           +   ++ F   D    E+ +I   L+++  K K  GY  ++ E + + D E++ T    +
Sbjct: 641 IKDRVYSFQTNDKADIES-SIGKSLEDLHIKAKNLGY--EMLEYVEKSDKEKEKTSSPTI 697

Query: 507 HHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFK 566
           +HSEKLA+ +GL      S +R+VKN   C D H F+K IS +  R+IIV+D  R H F 
Sbjct: 698 YHSEKLAITFGLENLPNSSPVRVVKNTLMCRDSHNFVKYISTLTSREIIVKDSKRLHKFV 757

Query: 567 NGDCSCKD 574
           NG CSC +
Sbjct: 758 NGQCSCGN 765



 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 196/456 (42%), Gaps = 28/456 (6%)

Query: 1   MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
           +E  + S    +H  I+K G+  +     F   F     +  G +  A+ +       N+
Sbjct: 89  LENCSFSSTQIIHCHIVKTGSHEDP----FLSSFLVTVYAKCGRMECAQQVFDHMNRRNA 144

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
             +  +++ Y  +S P H  H   LF  ML    H    P N+T    L  C  L   + 
Sbjct: 145 VAWTNLMKGYVQNSMPKHAIH---LFEEML---LHSECYPSNYTLAIALNACTSLHSLKL 198

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYS-VFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
           G+QLH +I K     D  I NAL  +Y+   G L V    F R+ ++DV+SWT+ I    
Sbjct: 199 GEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACG 258

Query: 180 DHDRPVEAIELFGRML--EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
           +    ++ + +F  ML  E  V+ N+ T+ S L  C +   L +G +VH +   K   E 
Sbjct: 259 EKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCT-KLGYES 317

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG-----------LASHGLC 286
              V  +L+ +Y K GCI  A              W AMI+G           L+++   
Sbjct: 318 NLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKG 377

Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
            EA++LF ++    +KPD  T ++VLS C     + +   + +   K  G    +     
Sbjct: 378 IEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKT-GFLSDVVVGSS 436

Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV-D 405
           ++++  + G ++ A      M ++   +LW T+I     H  +++A  L +    +G+  
Sbjct: 437 MINMYNKCGSIERASKVFLEMSIRT-MILWTTMITGFAQHGWSKQALNLFEDMKLVGIRP 495

Query: 406 DSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
           +  +++   +   S G  +      E+M K+  IKP
Sbjct: 496 NLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKP 531



 Score =  102 bits (255), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 7/284 (2%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+  +P +L+ C         + +H  I K G   D ++ + L+ +Y+  G +  A+++F
Sbjct: 77  DSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVF 136

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGAL 219
           D M  R+ V+WT+L+ G V +  P  AI LF  M L +    ++ T+   L AC    +L
Sbjct: 137 DHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSL 196

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAK-SGCIESAXXXXXXXXXXXXXXWTAMIS 278
            +G ++H  +  K  ++   ++  AL  +Y K  G +E                WTA IS
Sbjct: 197 KLGEQLHAYII-KYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAIS 255

Query: 279 GLASHGLCKEAIDLFLEM--ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
                G   + + +F+EM  +   V+P+E T+T+ LS C     +     V + +  + G
Sbjct: 256 ACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHA-LCTKLG 314

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
            E  ++    ++ L  + GC+ EA+     M    + V W  +I
Sbjct: 315 YESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN-DVNLVTWNAMI 357


>Medtr7g011840.1 | PPR containing plant-like protein | HC |
           chr7:3275571-3278623 | 20130731
          Length = 605

 Score =  264 bits (674), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/344 (39%), Positives = 205/344 (59%), Gaps = 2/344 (0%)

Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
           YS  GD+ +AR LFDR P +++V WT++I G  +  +  EA+ L   M ++G+ ++D   
Sbjct: 262 YSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFF 321

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
           +S+L ACA+SG L +G+K+H     + R  C   V  + IDMYAK GC++ A        
Sbjct: 322 ISILAACAESGMLGLGKKMHDSFL-RSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMK 380

Query: 267 XXX-XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAY 325
                  W +MI G   HG  +++I+LF  M     KPD  T   +L AC +A LV E  
Sbjct: 381 TEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGR 440

Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
             F  M++ YGI P I+H+GC+VDLL R G LKEA   + +MP +P+A++  TL+ AC++
Sbjct: 441 GYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRM 500

Query: 386 HEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
           H D + A  + K   ++   D G++ L SN+YA  G W N A+VR+ MN +G  KP G S
Sbjct: 501 HNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVS 560

Query: 446 RIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKL 489
            IEV+  +HEF + D++HP++ +I+  +D +V  L++ GY P+L
Sbjct: 561 SIEVEEEVHEFTVRDWSHPKSGDIYNMIDRLVHDLRQVGYVPRL 604



 Score =  144 bits (364), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 195/398 (48%), Gaps = 27/398 (6%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+HAQ++K     +  P    KL   A+ S + +L+ A  +    P  N + YN ++RAY
Sbjct: 40  QIHAQLIKCHLHQD--PYIAPKLI--ASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAY 95

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCC----ARLKLARQGKQLHG 126
           SLS + ++   +L  F  +L+    GV A DNFT+PF+LK C    + L L    K +H 
Sbjct: 96  SLSGNESN---SLCAFGVLLKMHVDGVLA-DNFTYPFLLKGCNGSSSWLSLV---KMVHA 148

Query: 127 FITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
            + K+GF  D ++ N+LI  Y   GD+ +A ++F  M +RDVVSW S++ GLV +     
Sbjct: 149 HVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDG 208

Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
           A+++F  M E     +  +  ++L     +G +    K+   + E+  +       + ++
Sbjct: 209 ALKVFDEMPER----DRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSW-----STMV 259

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
             Y+K+G ++ A              WT +ISG A  G  KEA++L  EME   ++ D+ 
Sbjct: 260 CGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDG 319

Query: 307 TMTAVLSACRNADLVREA-YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
              ++L+AC  + ++     M  S ++ R+     +      +D+ A+ GC+ +A    N
Sbjct: 320 FFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKV--LNSFIDMYAKCGCVDDAFRVFN 377

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
            M  + D V W ++I    +H   E++  L    +  G
Sbjct: 378 GMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREG 415


>Medtr8g027150.1 | PPR containing plant-like protein | HC |
           chr8:9538952-9542067 | 20130731
          Length = 506

 Score =  262 bits (670), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/471 (33%), Positives = 242/471 (51%), Gaps = 44/471 (9%)

Query: 44  DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
           +LNYA++LL  +    ++ YN +++A S     + H      F    +   HG  +P+ +
Sbjct: 31  NLNYAQVLLHHSQKPTTFLYNKLIQACS-----SKH----QCFTLYSQMYLHG-HSPNQY 80

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY---------------- 147
           TF F+   C  L     G+ +H    K GF  D +   AL+ MY                
Sbjct: 81  TFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEM 140

Query: 148 ---------------SVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
                          + FGD+  A ELF  MP R+VVSWT+++ G + + +  +A+ LF 
Sbjct: 141 SVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFM 200

Query: 193 RM-LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
           RM  E  V  N+ T+ SVL ACA+ GAL +G++V  +   K        V  A+++MYAK
Sbjct: 201 RMEREKDVSPNEVTLASVLPACANLGALEIGQRVE-VYARKNGFFKNLFVCNAVLEMYAK 259

Query: 252 SGCIESAXXXXXXXXXXXXX-XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
            G I+ A               W +MI GLA HG C +AI L+ +M      PD+ T   
Sbjct: 260 CGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVG 319

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           +L AC +  +V +   VF  M + + I P ++H+GC+VDLL RAG L EA + +  MPMK
Sbjct: 320 LLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRMPMK 379

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
           PD+V+W TL+ AC  H + E AE   +    +   + G+Y++ SN+YAS GKW   A++R
Sbjct: 380 PDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILSNIYASAGKWDGVAKLR 439

Query: 431 ELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
           ++M    + K  G S IE  G LH+F++ D +H E+  IF  L+ + + +K
Sbjct: 440 KVMKGSKITKTAGQSFIEEGGQLHKFIVEDRSHSESSEIFALLNGVYEMIK 490



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 7/223 (3%)

Query: 37  AALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHG 96
           A  +  GD+  A  L    P+ N   + TM+  Y  +     +  AL LF+ M R     
Sbjct: 153 AGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNK---QYEKALGLFMRMEREKD-- 207

Query: 97  VPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVA 156
             +P+  T   VL  CA L     G+++  +  K GF  + ++ NA++ MY+  G + VA
Sbjct: 208 -VSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVA 266

Query: 157 RELFDRMPD-RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
            ++FD +   R++ SW S+I GL  H +  +AI+L+ +ML  G   +D T V +L AC  
Sbjct: 267 WKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVGLLLACTH 326

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
            G +  G+ V   +     I  K      ++D+  ++G +  A
Sbjct: 327 GGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEA 369



 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 115/317 (36%), Gaps = 41/317 (12%)

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
           Q KQ HG+  +    +   ++  L+ +     +L  A+ L           +  LI    
Sbjct: 3   QVKQFHGYTLRNNIDNTKILIEKLLQI----PNLNYAQVLLHHSQKPTTFLYNKLIQACS 58

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
                 +   L+ +M   G   N  T   +   C    +LS+G+ +H     K   +   
Sbjct: 59  SKH---QCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFM-KSGFKHDV 114

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
             STAL+DMYAK GC++ A              W AM++G    G  + A++LF  M + 
Sbjct: 115 FASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSR 174

Query: 300 N--------------------------------VKPDERTMTAVLSACRNADLVREAYMV 327
           N                                V P+E T+ +VL AC N   +     V
Sbjct: 175 NVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRV 234

Query: 328 FSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE 387
               +K  G    +     V+++ A+ G +  A    + +    +   W ++I    VH 
Sbjct: 235 EVYARKN-GFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHG 293

Query: 388 DTERAERLMKQHLEMGV 404
              +A +L  Q L  G 
Sbjct: 294 QCHKAIQLYDQMLREGT 310


>Medtr7g032360.1 | PPR containing plant-like protein | HC |
           chr7:11369613-11371524 | 20130731
          Length = 541

 Score =  262 bits (669), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 168/525 (32%), Positives = 258/525 (49%), Gaps = 57/525 (10%)

Query: 2   EVTTMSEALQLHAQILKLGT-SNNDAPRNFSKLFTFAALSPSGDLNYAR--LLLTSNPAL 58
           +   + E   +H  ILK       D    F++L  F + S     NYA     +   P L
Sbjct: 28  QCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHMIKYPEL 87

Query: 59  NSYYYNTMLRAYSL---SSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
             Y  N M+R+Y       D    + AL L+  ML +       P+N TFPF++K C+RL
Sbjct: 88  RVY--NIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGI----VPNNLTFPFLVKGCSRL 141

Query: 116 KLARQ-GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSL 174
           +     G+ +H  + K GF +D ++ N+LI ++  FG    AR++FD M  RDVVSW S+
Sbjct: 142 QYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSM 201

Query: 175 IDGLVDHDRPVEAIELFGRM---------------LEAG--------------------V 199
           + G + +     A+ LF +M               ++AG                    V
Sbjct: 202 VVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVV 261

Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
           + +  T+ SVL ACA  G++  G+ VH  ++ K  IEC   + TAL++MY K G ++ A 
Sbjct: 262 KPDKITIASVLSACALLGSIDHGKWVHAYLR-KNDIECDVVIGTALVNMYGKCGDVQQAI 320

Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
                        WTAMIS  A HG  K+A D FLEME   VKP+  T   +LSAC ++ 
Sbjct: 321 EIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSG 380

Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
           LV +    F  MK+ Y IEP I H+ C+VD+L+RA    EA   + +MPMKPD  +W  L
Sbjct: 381 LVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGAL 440

Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL- 438
           +  C++H + +  E++    +++   +   YI   ++Y   GK+     +R  M ++G+ 
Sbjct: 441 LGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIE 500

Query: 439 IKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
            K PG S IE++G + EF +G+    E       L  ++D+L+ E
Sbjct: 501 TKIPGCSIIEINGVVQEFSVGEIPMKE-------LPLVLDRLRNE 538


>Medtr3g096420.1 | PPR containing plant-like protein | HC |
           chr3:44072693-44069577 | 20130731
          Length = 705

 Score =  261 bits (668), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 163/489 (33%), Positives = 246/489 (50%), Gaps = 46/489 (9%)

Query: 59  NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           N   +N+++  Y  +        AL +F+ M+     G+  PD  T   V   CA L   
Sbjct: 216 NIVSWNSLITCYEQNGPAGK---ALEVFVRMM---NCGIE-PDEITLASVASACASLSAI 268

Query: 119 RQGKQLHGFITKMG-FGSDCYIMNALIHMYSVFGDLGVARELFDRMP------------- 164
           R+G Q+H  + K   + +D  + NAL+ MY+    +  AR +FDRMP             
Sbjct: 269 REGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSG 328

Query: 165 ------------------DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
                             +R+VVSW +LI G   +    EA+ LF  +    +     T 
Sbjct: 329 YAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTF 388

Query: 207 VSVLRACADSGALSMGRKVHG-IVKE----KKRIECKCNVSTALIDMYAKSGCIESAXXX 261
            ++L ACA+   L +GR+ H  I+K     K   +    V  +LIDMY K G +E     
Sbjct: 389 GNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLV 448

Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
                      W AMI G A +G   EA+++F EM     +PD  TM  VLSAC +A LV
Sbjct: 449 FERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLV 508

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
            E    F  M   +G+ P   H+ C+VDLL RAGCL EA + +  MPM+PDAV+W +L+ 
Sbjct: 509 EEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLA 568

Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
           ACKVH +    + + ++ LE+   +SG Y+L SN+YA +G+W +   VR+ M + G+IK 
Sbjct: 569 ACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQ 628

Query: 442 PGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEK 501
           PG S I +   LH F++ D  HP   +I++ L  + +++K+ GY P+  +   E  +EE 
Sbjct: 629 PGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEADDD--EPYEEES 686

Query: 502 ATQLLHHSE 510
            ++L+ HSE
Sbjct: 687 DSELILHSE 695



 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 34/339 (10%)

Query: 89  MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS 148
           ++R+    +   D+  F  +L  C + K   + + +H  I K  F S+ +I N L+ +Y 
Sbjct: 6   LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYG 65

Query: 149 VFGDLGVARELFDRM-------------------------------PDRDVVSWTSLIDG 177
             G L  AR++FD M                               P+RD  SW +++ G
Sbjct: 66  KCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSG 125

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
               DR  EA+     M      +N+ +  S L ACA    LS+G ++HG++  K R   
Sbjct: 126 FAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIA-KSRYSL 184

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
              + +AL+DMY+K   + SA              W ++I+    +G   +A+++F+ M 
Sbjct: 185 DVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMM 244

Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
            C ++PDE T+ +V SAC +   +RE   + + + K       +     +VD+ A+   +
Sbjct: 245 NCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRV 304

Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
            EA    + MP++   V+  T + +      + +A RLM
Sbjct: 305 NEARLVFDRMPLRD--VVSETSMVSGYAKASSVKAARLM 341



 Score =  110 bits (274), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 166/388 (42%), Gaps = 44/388 (11%)

Query: 29  NFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIF 88
            FS      AL+  G L+ A  L    P  +   +N M+  ++        F     F+ 
Sbjct: 85  TFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFA----QRDRFEEALRFVV 140

Query: 89  MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS 148
            +      +   + ++F   L  CA L     G Q+HG I K  +  D Y+ +AL+ MYS
Sbjct: 141 DMHSEDFVL---NEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197

Query: 149 VFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
               +  A+  FD M  R++VSW SLI     +    +A+E+F RM+  G+E ++ T+ S
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257

Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM-------------------- 248
           V  ACA   A+  G ++H  V +  +      +  AL+DM                    
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317

Query: 249 -----------YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
                      YAK+  +++A              W A+I+G   +G  +EA+ LFL ++
Sbjct: 318 DVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLK 377

Query: 298 TCNVKPDERTMTAVLSACRN-ADLV--REA--YMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
             ++ P   T   +L+AC N ADL   R+A  +++      + G +  I     ++D+  
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYM 437

Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           + G +++       M ++ D V W  +I
Sbjct: 438 KCGLVEDGRLVFERM-LERDNVSWNAMI 464



 Score =  106 bits (264), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 153/346 (44%), Gaps = 59/346 (17%)

Query: 3   VTTMSEALQLHAQILK---------LGTS----------NNDAPRNFSKL---------F 34
           ++ + E LQ+HA+++K         LG +           N+A   F ++          
Sbjct: 265 LSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETS 324

Query: 35  TFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPT 94
             +  + +  +  ARL+ ++    N   +N ++  Y+ + +      A+ LF+ + R   
Sbjct: 325 MVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEE---AVRLFLLLKRESI 381

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF------GSDCYIMNALIHMYS 148
                P ++TF  +L  CA L   + G+Q H  I K GF       SD ++ N+LI MY 
Sbjct: 382 W----PTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYM 437

Query: 149 VFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
             G +   R +F+RM +RD VSW ++I G   +    EA+E+F  ML +G   +  T++ 
Sbjct: 438 KCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIG 497

Query: 209 VLRACADSGALSMGRKV-------HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           VL AC+ +G +  GR         HG+V  K    C       ++D+  ++GC++ A   
Sbjct: 498 VLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTC-------MVDLLGRAGCLDEANNL 550

Query: 262 XXXX-XXXXXXXWTAMISGLASHG---LCKEAIDLFLEMETCNVKP 303
                       W ++++    HG   L K   +  LE++  N  P
Sbjct: 551 IQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGP 596


>Medtr8g105210.1 | PPR containing plant-like protein | HC |
           chr8:44370221-44373841 | 20130731
          Length = 959

 Score =  261 bits (666), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/447 (34%), Positives = 240/447 (53%), Gaps = 8/447 (1%)

Query: 42  SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
            GD+  A      N  ++      M+  Y L+     +  AL+LF ++++        P+
Sbjct: 427 GGDVEMACKTFQQNTLVDVAVCTAMISGYVLNG---LNVEALNLFRWLIQEGM----VPN 479

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
             T   VL  CA L   + GK+LH  I K G  + C + +++ +MY+  G L +A + F 
Sbjct: 480 CLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFR 539

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
           RMP +D V W  +I     + +P  AI+LF +M  +G + +  ++ + L ACA+  AL  
Sbjct: 540 RMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYY 599

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
           G+++H  V     I     V++ LIDMY+K G +  A              W ++I+   
Sbjct: 600 GKELHCFVVRNSFIS-DTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYG 658

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
           +HG  +E +DLF EM    ++PD  T   ++SAC +A LV E    F  M + YGI   +
Sbjct: 659 NHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARM 718

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
           +HF C+VDL  RAG L EA D + +MP  PDA  W +L+ AC++H + E A+   K  +E
Sbjct: 719 EHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVE 778

Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDY 461
           +  ++SG Y+L SNV+A  G+W +  +VR LM +KG+ K PG S I+V+G  H F   D 
Sbjct: 779 LDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADG 838

Query: 462 NHPEADNIFVKLDEMVDKLKKEGYNPK 488
            HP++  I++ L  ++ +L+K GY P+
Sbjct: 839 CHPQSVEIYLILKNLLLELRKHGYVPQ 865



 Score =  154 bits (390), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 174/357 (48%), Gaps = 10/357 (2%)

Query: 42  SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
           +G ++ A+ L    P  +   +N ML  Y  + D      AL  F    +   +    P+
Sbjct: 225 NGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNS---ALGTF----QEMRNSCVKPN 277

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
           + +F  +L  CA   + R G QLHG + + GF SD  + N +I MYS  G+L  AR++FD
Sbjct: 278 SVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFD 337

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
            MP  D V+W  LI G V +    EA+ LF  M+ +GV+++  T  S L +   SG+L  
Sbjct: 338 IMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKY 397

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
            ++VH  +  +  +     + +AL+D+Y K G +E A               TAMISG  
Sbjct: 398 CKEVHSYI-VRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
            +GL  EA++LF  +    + P+  TM +VL AC     ++    +  D+ K+ G+E   
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK-GLENVC 515

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
           Q    +  + A++G L  A  F   MP+K D+V W  +I +   +   E A  L +Q
Sbjct: 516 QVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNGKPELAIDLFRQ 571



 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 159/349 (45%), Gaps = 21/349 (6%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPS----GDLNYARLLLTSNPALNSYYYNTM 66
           Q+HA++L  G   N +    S++     L  S    G+L + RL L       S  +N +
Sbjct: 97  QIHAKVLVCGM--NGSLTLGSRMLGMYVLCRSFKDVGNL-FCRLQLCY-----SLPWNWL 148

Query: 67  LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHG 126
           +R +S+       F AL  F  ML        APD +TFP+V+K C  L      K +H 
Sbjct: 149 IRGFSMLG--CFDF-ALMFFFRMLGSNV----APDKYTFPYVIKACGGLNNVPLCKMVHE 201

Query: 127 FITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
               MGF  D +I ++LI +Y+  G +  A+ LFD +P RD + W  +++G V +     
Sbjct: 202 LARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNS 261

Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
           A+  F  M  + V+ N  + V +L  CA  G +  G ++HG+V  +   E    V+  +I
Sbjct: 262 ALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI-RSGFESDPTVANTII 320

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
            MY+K G +  A              W  +I+G   +G   EA+ LF  M T  VK D  
Sbjct: 321 TMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSI 380

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
           T  + L +   +  ++    V S +  R+G+   +     +VD+  + G
Sbjct: 381 TFASFLPSVLKSGSLKYCKEVHSYI-VRHGVPFDVYLKSALVDIYFKGG 428



 Score = 79.7 bits (195), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 13/291 (4%)

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSV---FGDLGVARELFDRMPDRDVVSWTSLI 175
           +Q +Q+H  +   G      + + ++ MY +   F D+G    LF R+     + W  LI
Sbjct: 93  QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVG---NLFCRLQLCYSLPWNWLI 149

Query: 176 DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
            G         A+  F RML + V  +  T   V++AC     + + + VH + +     
Sbjct: 150 RGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMG-F 208

Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
                + ++LI +Y  +G I  A              W  M++G   +G    A+  F E
Sbjct: 209 HMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQE 268

Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE--PTIQHFGCVVDLLAR 353
           M    VKP+  +   +LS C    +VR A +    +  R G E  PT+ +   ++ + ++
Sbjct: 269 MRNSCVKPNSVSFVCLLSVCATRGIVR-AGIQLHGLVIRSGFESDPTVAN--TIITMYSK 325

Query: 354 AGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
            G L +A    + MP + D V W  LI     +  T+ A  L K  +  GV
Sbjct: 326 CGNLFDARKIFDIMP-QTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGV 375


>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38323846-38321575 | 20130731
          Length = 628

 Score =  260 bits (665), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 218/406 (53%), Gaps = 7/406 (1%)

Query: 89  MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS 148
           M RR       P  +T   VL   + +     G+ +HGF+TKMG+ S   ++NALI MY 
Sbjct: 221 MFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYG 280

Query: 149 VFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
                  A  +F+ M ++D+ SW S+I            ++LF RML   V+ +  TV +
Sbjct: 281 KCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTT 340

Query: 209 VLRACADSGALSMGRKVHG-IVKEKKRIECKCN------VSTALIDMYAKSGCIESAXXX 261
           VL AC    AL  GR++HG ++      E + N      ++ AL+DMYAK G +  A   
Sbjct: 341 VLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMV 400

Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
                      W  MI+G   HG   EA+D F  M    + P+E +   +LSAC +A +V
Sbjct: 401 FDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMV 460

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
           +E     ++M  +YG+ P+++H+ CV+D+L RAG L EA D M  MP K D V WR L+ 
Sbjct: 461 KEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCRAGKLVEAYDLMLTMPFKADPVGWRALLA 520

Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
           AC++++DT+ AE    + +E+     G+Y+L SNVY  VG++   +E+R  M ++ + K 
Sbjct: 521 ACRIYKDTDLAEIAASKVIELEPGHCGNYVLMSNVYGVVGRYEQVSELRHTMRQQNVKKR 580

Query: 442 PGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
           PG S IE+   +H F+ GD  HP+ D I+  L+ +   L+++GY P
Sbjct: 581 PGCSWIELMNGVHVFLTGDRTHPQTDFIYAGLNSLTAVLQEQGYVP 626



 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 177/400 (44%), Gaps = 21/400 (5%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLT--SNPALN 59
           + T +++  QLH  +LK G     +P   + +      S    +NYA  +    ++   N
Sbjct: 41  QTTNLTKGKQLHTHLLKNGFFA--SPLAITSIINM--YSKCTLINYALKVFNYPTHHDKN 96

Query: 60  SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
            + YN ++  + +S+  + H   L   + +L     GV  PD FTFP V++ C       
Sbjct: 97  VFAYNAIIAGF-VSNGLSQHSFGLYKQMRLL-----GVVIPDKFTFPCVIRACGDAGDVF 150

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
           + K++HG + K G   D ++ +AL+  Y  F  +  A E+F+ +P RDVV W S+++G  
Sbjct: 151 EVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYA 210

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
                 EA+ +F RM+E GV     TV  VL   +  G    G+ VHG +  K       
Sbjct: 211 QIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLT-KMGYHSSV 269

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
            V  ALIDMY K  C   A              W ++IS     G     + LF  M   
Sbjct: 270 VVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGN 329

Query: 300 NVKPDERTMTAVLSACRNADLV---RE--AYMVFSDMKK--RYGIEPTIQHFGCVVDLLA 352
            V+PD  T+T VL AC +   +   RE   YM+ + + K  R      +     ++D+ A
Sbjct: 330 KVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYA 389

Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
           + G +++A    + M  K D   W  +I    +H   + A
Sbjct: 390 KCGSMRDARMVFDNMTEK-DVASWNIMITGYGMHGYGDEA 428



 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 6/275 (2%)

Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP--DR 166
           L+ CA+     +GKQLH  + K GF +    + ++I+MYS    +  A ++F+     D+
Sbjct: 36  LQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHHDK 95

Query: 167 DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKV 225
           +V ++ ++I G V +     +  L+ +M   GV + D  T   V+RAC D+G +   +K+
Sbjct: 96  NVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKKI 155

Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
           HG++  K  +E    V +AL+  Y K   +  A              W +M++G A  G 
Sbjct: 156 HGLLF-KFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGC 214

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
            +EA+ +F  M    V P   T+T VLS             V   + K  G   ++    
Sbjct: 215 FEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKM-GYHSSVVVLN 273

Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
            ++D+  +  C  +A +    M  K D   W ++I
Sbjct: 274 ALIDMYGKCKCASDALNVFEVMDEK-DMFSWNSII 307


>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:40624011-40626927 | 20130731
          Length = 793

 Score =  257 bits (657), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 248/479 (51%), Gaps = 15/479 (3%)

Query: 11  QLHAQILKLGTSNND-APRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
           Q+H   +K G   N  A  +   ++      PS  + + ++    NP + S+  N ++ A
Sbjct: 289 QVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQI---KNPDIVSW--NAIIAA 343

Query: 70  YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
           ++ + D      A+  F    R+  H    PD+ T+  +L  C       QG+Q+H +I 
Sbjct: 344 FADNGDANE---AIDFF----RQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIV 396

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELF-DRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
           K+GF  +  + N+L+ MY+    L  A  +F D   + ++VSW +++   +   +  E  
Sbjct: 397 KIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETF 456

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
            L+  M  +G + +  T+ ++L  CA+  +L +G +VH     K  +    +V   LIDM
Sbjct: 457 RLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVH-CYSIKSGLILDVSVCNGLIDM 515

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK G ++ A              W+++I G A  GL  EA++LF  M    V+P+E T 
Sbjct: 516 YAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTY 575

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
              LSAC +  LV E + ++  M+  +GI PT +HF C+VDLLARAGCL EAE F+    
Sbjct: 576 LGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSG 635

Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
           +  D   W+TL+ ACK H + + AER     L++   +S + ++  N++AS G W   A+
Sbjct: 636 LDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAK 695

Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNP 487
           +R+LM + G+ K PG S IEV    H F   D +HP+ + I+  L+E+  ++  +GY+P
Sbjct: 696 LRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDP 754



 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 160/371 (43%), Gaps = 14/371 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLHA ++K    ++   +N       +  +  G + +A  + T  P  +   + TM+  Y
Sbjct: 187 QLHAHVIKSWFGHHLTSQNA----LISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGY 242

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
                  +   AL LF  +LR+ T+    P+ F F  V   C+ L     GKQ+HG   K
Sbjct: 243 I---QLGYRVEALYLFRDLLRQGTY---QPNEFIFGSVFSACSSLLELEYGKQVHGMCVK 296

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
            G   + +   +L  MY+ FG L  A+  F ++ + D+VSW ++I    D+    EAI+ 
Sbjct: 297 FGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDF 356

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F +M+  G+  +  T +S+L  C     L+ GR++H  +  K   + +  V  +L+ MY 
Sbjct: 357 FRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIV-KIGFDKEITVCNSLLTMYT 415

Query: 251 KSGCIESAXXXXX-XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
           K   +  A               W A++S         E   L+ EM     KPD  T+T
Sbjct: 416 KCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITIT 475

Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
            +L  C     +     V     K  G+   +     ++D+ A+ G LK A D  ++   
Sbjct: 476 TLLGTCAELTSLGVGNQVHCYSIKS-GLILDVSVCNGLIDMYAKCGSLKHARDVFDS-TQ 533

Query: 370 KPDAVLWRTLI 380
             D V W +LI
Sbjct: 534 NLDIVSWSSLI 544



 Score =  117 bits (292), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 156/339 (46%), Gaps = 13/339 (3%)

Query: 78  HHF-HALSLFIFMLRRP-THGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGS 135
           HH+  AL  F F L+   +H  P+    T+  ++  CA  +     K++H  + K  +  
Sbjct: 43  HHYKEALEAFDFHLKNSNSHFEPS----TYTSLVLACANFRSLDYAKKIHDHVLKSNYQP 98

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
              + N +I+MY   G +  AR++FD M   +VVSWTS+I G   + +  +AI ++ +M 
Sbjct: 99  SIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMT 158

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
            +G   +  T  SV++AC  +G + +GR++H  V  K           ALI MY   G I
Sbjct: 159 RSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVI-KSWFGHHLTSQNALISMYTNFGQI 217

Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE-METCNVKPDERTMTAVLSA 314
           E A              W  MI+G    G   EA+ LF + +     +P+E    +V SA
Sbjct: 218 EHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSA 277

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK-PDA 373
           C +  L  E       M  ++G+   +     + D+ A+ G L  A+  M    +K PD 
Sbjct: 278 CSSL-LELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAK--MAFCQIKNPDI 334

Query: 374 VLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYI 411
           V W  +I A   + D   A    +Q + +G+  DS +YI
Sbjct: 335 VSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYI 373


>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:44985847-44989750 | 20130731
          Length = 912

 Score =  255 bits (651), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 244/477 (51%), Gaps = 15/477 (3%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++FT   +L  C++ +       LHG I K     D  + NAL+  Y+  G +  A  +
Sbjct: 418 PNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSV 477

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
              M  RD +++T L   L        A+++   M   G+++++ ++ S L A A  G +
Sbjct: 478 IGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTM 537

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G+++H    +     C  +VS +L+ +Y+K G I  A              W  +ISG
Sbjct: 538 ETGKQLHCYSVKSGFQRCH-SVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISG 596

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            + +GL   A+  F +M    VKPD  T+ +++SAC +  L+      F  M+K Y I P
Sbjct: 597 FSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITP 656

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            + H+ C+VDLL R G L+EA   +  M  KPD+++ +TL+ AC +H +    E + ++ 
Sbjct: 657 KLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRC 716

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           LE+   D   Y+L +N+Y + G      + R LM ++GL + PG   +E+   +H F  G
Sbjct: 717 LELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAG 776

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLI 519
           +      D I  KL+ ++ + +   Y  +        ++E+K     +H E+LA+A+G++
Sbjct: 777 E--KINEDEITEKLEFLITEFRNRRYQYQ--------ENEDK----FYHPEQLAVAFGVL 822

Query: 520 RTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
                S IRI KN   C  CH F+ L +++  R+II+RDR RFH FK+G CSC+D +
Sbjct: 823 NAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIF 879



 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 6/275 (2%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           VL  C    L ++G  +H  I K+G   D Y+ N L+ +Y+    +  AR LFD MP+RD
Sbjct: 21  VLSFCNSNSL-KEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRD 79

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
           VVSWT+++          +A++LF  M+ +G   N+ T+ S LR+C   G    G ++H 
Sbjct: 80  VVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIH- 138

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGC--IESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
               K  +E    V T+L++ Y K GC  +E+               WT M+S L  +G 
Sbjct: 139 CSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGK 198

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG 345
             EA +++++M    V P+E T   +L A  +   +    ++ + +   +G E  +    
Sbjct: 199 WGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHL-IMFGAELNLVLKT 257

Query: 346 CVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
            VVD+ ++   + +A    N  P + D  LW TLI
Sbjct: 258 AVVDMYSKCRRMVDAIKVSNLTP-EYDVYLWTTLI 291



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 153/312 (49%), Gaps = 14/312 (4%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           ++ E + +H+ I+KLG  ++    N   L +  A   +  ++ AR L    P  +   + 
Sbjct: 29  SLKEGICIHSPIIKLGLQHDLYLTN--NLLSLYA--KTFGVHRARHLFDEMPNRDVVSWT 84

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
           T+L +++      HH  AL LF  M+    +    P+ FT    L+ C  L    +G Q+
Sbjct: 85  TILSSHT---KTKHHSDALQLFDMMIGSGEY----PNEFTLSSALRSCFALGEFERGMQI 137

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGV-ARELFDRMPD-RDVVSWTSLIDGLVDHD 182
           H    K+G   + ++  +L+  Y+  G   V A +L   + D  DVVSWT+++  LV++ 
Sbjct: 138 HCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENG 197

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
           +  EA E++ +M+E+GV  N+ T V +L A +    LS G+ +H  +      E    + 
Sbjct: 198 KWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGA-ELNLVLK 256

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           TA++DMY+K   +  A              WT +ISG   +   +EAI +F +ME   + 
Sbjct: 257 TAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLL 316

Query: 303 PDERTMTAVLSA 314
           P+  T +++L+A
Sbjct: 317 PNNFTYSSLLNA 328



 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 5/281 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P+ FTF  +L   +       GK LH  +   G   +  +  A++ MYS    +  A ++
Sbjct: 216 PNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKV 275

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
            +  P+ DV  WT+LI G   + +  EAI +F  M  +G+  N+ T  S+L A +   +L
Sbjct: 276 SNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSL 335

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES-AXXXXXXXXXXXXXXWTAMIS 278
            +G + H  V     +E    +  AL+DMY K   I + A              WT++I+
Sbjct: 336 DLGEQFHSRVIIVG-LEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIA 394

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
           G A   L +++  LF EM+   V+P+  TM+A+L AC     +    M+   + K   ++
Sbjct: 395 GFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKT-KVD 452

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
             I     +VD  A  G + EA   +  M ++ D++ +  L
Sbjct: 453 IDIAVANALVDTYAGVGMIDEAWSVIGTMNLR-DSITYTCL 492


>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
           20130731
          Length = 1026

 Score =  254 bits (648), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/423 (33%), Positives = 226/423 (53%), Gaps = 36/423 (8%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY------------ 147
           P+  T   ++  C++++    GK+ H +I + G      + NAL+ MY            
Sbjct: 257 PNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVL 316

Query: 148 -------------------SVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
                              + FG L VARE+  ++P++ VV W ++I G V   +  EA+
Sbjct: 317 FDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEAL 376

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
            LF  M    +E +  T+V+ L AC+  GAL +G  +H  + E+ ++     + TAL+DM
Sbjct: 377 ALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI-ERHKLSIDVALGTALVDM 435

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           YAK G I  A              WTA+I GLA HG  ++A+  F +M    + PDE T 
Sbjct: 436 YAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITF 495

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
             VLSAC +  LV E    FS+M  ++ + P ++H+ C+VDLL RAG L+EAE+ +  MP
Sbjct: 496 LGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555

Query: 369 MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAE 428
           M  DA +   L +AC+V+ + +  ER   + LE+   DSG+Y+L +++Y+    W     
Sbjct: 556 MAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARS 615

Query: 429 VRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIF---VKLDEMVDKL-KKEG 484
            R+LMN KG+ K PG S +E++G +HEFV+ D +HP+++ I+   V L + +D + +K G
Sbjct: 616 ARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQLDVIVRKHG 675

Query: 485 YNP 487
           Y P
Sbjct: 676 YFP 678



 Score =  153 bits (387), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 188/425 (44%), Gaps = 42/425 (9%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+ AQ++  G   N      S+L  F ALS S +L+Y   +L     LN + +N  +R Y
Sbjct: 75  QIQAQMVSTGLIENGFAA--SRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGY 132

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
             S D    F      +   R    G   PDN T+P +LK C     +  G  + G + K
Sbjct: 133 VESGDIEGGF------MLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLK 186

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
            GF  D ++ NA I M    G+L VA ++F++   RD+V+W S+I G V     +EAI++
Sbjct: 187 FGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKI 246

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           +  M    V  N+ T++ ++ +C+    L++G++ H  +KE   +E    ++ AL+DMY 
Sbjct: 247 YKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHG-LEFTIPLTNALMDMYV 305

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLC------------------------ 286
           K G + +A              WT M+ G A  G                          
Sbjct: 306 KCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISG 365

Query: 287 -------KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
                  KEA+ LF EM+   ++PD+ TM   LSAC     +     +   + +R+ +  
Sbjct: 366 CVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI-ERHKLSI 424

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            +     +VD+ A+ G +  A      +P + + + W  +I    +H + + A     + 
Sbjct: 425 DVALGTALVDMYAKCGNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQDALSYFSKM 483

Query: 400 LEMGV 404
           + +G+
Sbjct: 484 IHIGI 488



 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 7/216 (3%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G L+ AR +L   P  +   +N ++   S          AL+LF  M  R       PD 
Sbjct: 339 GFLDVAREILYKIPEKSVVPWNAII---SGCVQAKQGKEALALFHEMQIRTIE----PDK 391

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T    L  C++L     G  +H +I +     D  +  AL+ MY+  G++  A ++F+ 
Sbjct: 392 VTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEE 451

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           +P R+ ++WT++I GL  H    +A+  F +M+  G+  ++ T + VL AC   G +  G
Sbjct: 452 IPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEG 511

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           RK    +  K  +  K    + ++D+  ++G +E A
Sbjct: 512 RKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEA 547


>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:38735797-38738097 | 20130731
          Length = 766

 Score =  253 bits (647), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 239/459 (52%), Gaps = 13/459 (2%)

Query: 40  SPSGDLNYARLLLTSNPA--LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
           S  G L  AR+L  S  A  L +  +N M+  YS +     H  AL +F  M +      
Sbjct: 316 SKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGC---HLEALEMFTRMCQNDV--- 369

Query: 98  PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGS-DCYIMNALIHMYSVFGDLGVA 156
             PD +TF  V    A LK  +  K+ HG   K GF + +  ++NAL   Y     L   
Sbjct: 370 -KPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVLNALADAYVKCESLEAG 428

Query: 157 RELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADS 216
            ++F +M  +D+VSWT+++          +A+ +F +M   G   N  T  SV+ AC   
Sbjct: 429 EKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGL 488

Query: 217 GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
             L  G+++HG++  K  ++ +  + +ALIDMY+K G +  A              WTA+
Sbjct: 489 CLLEYGQQIHGLIC-KASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAI 547

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           IS  A HGL ++A+ LF +ME   VK +  T+  +L AC +  +V +   +F+ M+  YG
Sbjct: 548 ISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQMEGTYG 607

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           + P ++H+ CVVDLL R G L EA  F++ MP++PD ++W+TL+ AC++H + E  E   
Sbjct: 608 VVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLGACRIHGNAELGETAA 667

Query: 397 KQHLEMG--VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
           ++ L      + S +Y+L SN Y   G   +   +R++M ++G+ K PG S I V G +H
Sbjct: 668 QKILSTQPEPEHSSTYVLLSNTYIESGLLEDGIGLRDVMKERGIRKEPGYSWISVRGEVH 727

Query: 455 EFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVL 493
           +F   D  HP+ D I+  L+E+  ++K     P+ S + 
Sbjct: 728 KFYARDQQHPQKDKIYTMLEELTRRIKHMHCEPEFSLIF 766



 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 167/393 (42%), Gaps = 28/393 (7%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           ++ +A  +H  +LK G  + D     + +    A S   D + AR +       N + + 
Sbjct: 81  SLKQANCIHGHVLKSGFGDRDNLVFLNHVV--HAYSKCKDYDSARKVFDGMSERNVFSWT 138

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
            M+ A   S++  ++ +AL LF  ML +        D F F  VL+ C  L     G+ +
Sbjct: 139 VMIVA---SNEHGYYRYALELFCMMLEQGL----LLDGFAFSAVLQSCVGLDSVVFGEMV 191

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           H  +   GF     +  +L+++Y+  G    +  +F+ M D + VSW ++I G   +   
Sbjct: 192 HAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLY 251

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
           ++A +    M+E GV  N  T + + +A    G ++   +VH    E   ++   +V TA
Sbjct: 252 LQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWG-LDSNTSVGTA 310

Query: 245 LIDMYAKSG--CIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           LI+MY+K G  C                  W AMI+G +  G   EA+++F  M   +VK
Sbjct: 311 LINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVK 370

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI-------EPTIQHFGCVVDLLARAG 355
           PD  T   V ++      ++        +K+ +G+          I     + D   +  
Sbjct: 371 PDLYTFCCVFNSIAGLKCLK-------SLKEAHGVALKCGFDAMEISVLNALADAYVKCE 423

Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLIWA-CKVHE 387
            L+  E     M  K D V W T++ A C+  E
Sbjct: 424 SLEAGEKVFYKME-KKDIVSWTTMVTAYCQCSE 455



 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 27/287 (9%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFG--SDCYIMNALIHMYSVFGDLGVARELFDRMPD 165
           +LK C +    +Q   +HG + K GFG   +   +N ++H YS   D   AR++FD M +
Sbjct: 72  LLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSE 131

Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
           R+V SWT +I    +H     A+ELF  MLE G+ ++     +VL++C    ++  G  V
Sbjct: 132 RNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDSVVFGEMV 191

Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
           H  V  +  +     V T+L+++YAK G  E +              W AMISG  S+GL
Sbjct: 192 HAQVVVRGFLM-HAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGL 250

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSAC-------RNADLVREAYMVFSDMKKRYGIE 338
             +A D  + M    V P++ T   +  A        R  ++ R AY         +G++
Sbjct: 251 YLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAY--------EWGLD 302

Query: 339 PTIQHFGCVVDLLARAGCLKEA-----EDFMNAMPMKPDAVLWRTLI 380
                   ++++ ++ G L +A       F N +   P    W  +I
Sbjct: 303 SNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAP----WNAMI 345


>Medtr3g111500.1 | PPR containing plant-like protein | HC |
           chr3:52097450-52094882 | 20130731
          Length = 524

 Score =  253 bits (646), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 161/482 (33%), Positives = 252/482 (52%), Gaps = 55/482 (11%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNF--SKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
           TM +  Q+HA  +    +NN    ++  S++  F A SP GD  YA  L T  P  N + 
Sbjct: 20  TMKQTKQIHAHAI----ANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNPNIFD 75

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           YN+++ +Y+ +S       +LS+F  ML         P++ TF  ++K C  L      +
Sbjct: 76  YNSIITSYTTNSQFDK---SLSVFTKMLNMNIR----PNSHTFTTLVKSCVTLS---SLE 125

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG----- 177
           Q+     K G  SD Y ++++I+++S  G + +AR++FD   +R+VV WTSL+ G     
Sbjct: 126 QVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCG 185

Query: 178 LVDHDRPV--------------------------EAIELFGRMLE-----AGVEVNDATV 206
           LV+  R V                          E ++LF  + +     A V+ N A +
Sbjct: 186 LVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALL 245

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
           VSVL AC   GA   G+ +H  V+E   +E    + TALID YAK G ++ A        
Sbjct: 246 VSVLNACTVMGAFEEGKWIHSYVEENG-LEYDLELGTALIDFYAKCGWVKDAEKVFDKML 304

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                 W+AMI GLA +G  K A++LF +ME    KP+E T   VL+AC +  L  E+  
Sbjct: 305 VKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSR 364

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           +F  M ++Y I P+I+H+GC+VD+LAR+G +K+A  F+N+M ++PD  +W +L+  C +H
Sbjct: 365 LFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMH 424

Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
              E  +++ K  +E   + SG Y+L +N+YA++GKW   +EV E+  K   I P     
Sbjct: 425 GHYELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVAEV--KSLFIAPNKQKS 482

Query: 447 IE 448
           IE
Sbjct: 483 IE 484


>Medtr8g068150.1 | SLOW growth protein, putative | HC |
           chr8:28404022-28408146 | 20130731
          Length = 633

 Score =  249 bits (637), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/500 (32%), Positives = 251/500 (50%), Gaps = 57/500 (11%)

Query: 9   ALQLHAQILKLGTSN----NDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
             Q+H  +L+ G  +    N+A  NF   F        GD+  A  +   +   +   +N
Sbjct: 137 GFQVHCHVLRNGFGSDVFVNNALLNFYCGF--------GDVVNAYKVFDESFVRDCVSFN 188

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
           TM+  ++   D +  F        +  RP       D +TF  +L  C+ L+  R G+Q+
Sbjct: 189 TMINGFARKGDVSGCFRVFGEMRGVCVRP-------DEYTFVALLSGCSVLEDYRIGRQV 241

Query: 125 HGFITK-MG-FGSDCYIMNALIHMYS---------------------------------V 149
           HG + + +G FG +  ++N L+ MY+                                 +
Sbjct: 242 HGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYAL 301

Query: 150 FGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
            G++ VAR LFD+M +RDVVSWT++I G        EA+ELF ++   G++ ++  VV+ 
Sbjct: 302 RGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAA 361

Query: 210 LRACADSGALSMGRKVH-GIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX-- 266
           L ACA  GAL +GR++H     E          ++A++DMYAK G I+ A          
Sbjct: 362 LSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDD 421

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                 + ++ISGLA HG  + A +LF EM    +KPD  T  AVLSAC +  LV     
Sbjct: 422 KKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKK 481

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           +F  M   YG+ P ++H+GC+VDLL RAG L EA   +  MP K +AV+WR L+ ACKVH
Sbjct: 482 LFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVH 541

Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
            D   A     + +E+  D    Y++ SN+ +   +    A +R+ ++  G+ KPPG S 
Sbjct: 542 GDVALARVASYELVELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSY 601

Query: 447 IEVDGALHEFVMGDYNHPEA 466
           +E++ +LH+F+ GD +HPEA
Sbjct: 602 VEMNRSLHKFLAGDKSHPEA 621



 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 205/444 (46%), Gaps = 60/444 (13%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLL---TSNPALNSY 61
           TM +A Q++A I+  G  NN      + LFTF A S S    +    L    +NP +  +
Sbjct: 26  TMQQAHQIYAHIIVTGRHNNLHLS--TTLFTFYASSSSSQSLHHSHTLFTQITNPDI--F 81

Query: 62  YYNTMLRAYS-LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA-- 118
            +N +++AYS + S P H F   SLF  ML         PD+FTFPF+LK CA + ++  
Sbjct: 82  LWNAIIKAYSQIHSPPQHPF---SLFKTMLNSSV----LPDSFTFPFLLKACANVLISAP 134

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
           + G Q+H  + + GFGSD ++ NAL++ Y  FGD+  A ++FD    RD VS+ ++I+G 
Sbjct: 135 QFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGF 194

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEK------ 232
                      +FG M    V  ++ T V++L  C+      +GR+VHG+V  +      
Sbjct: 195 ARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGG 254

Query: 233 ------KRIE--CKCN--------------------VSTALIDMYAKSGCIESAXXXXXX 264
                 K ++   KC                       T+L+  YA  G ++ A      
Sbjct: 255 NVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQ 314

Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN---ADLV 321
                   WTAMISG +  G  +EA++LF+++E   +KPDE  + A LSAC      +L 
Sbjct: 315 MGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELG 374

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED-FMNAMPMKPDAVLWRTLI 380
           R  +  ++       I         VVD+ A+ G +  A D F      K    L+ ++I
Sbjct: 375 RRIHRQYAGENWTCSINRGFT--SAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSII 432

Query: 381 WACKVHEDTERAERLMKQHLEMGV 404
                H   E A+ L +   EMG+
Sbjct: 433 SGLAHHGRGEYAKNLFE---EMGL 453


>Medtr1g083890.1 | PPR containing plant-like protein | HC |
           chr1:37365601-37367754 | 20130731
          Length = 490

 Score =  249 bits (636), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 157/476 (32%), Positives = 232/476 (48%), Gaps = 43/476 (9%)

Query: 5   TMSEALQLHAQILKLGTSN-NDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           T +   Q+HA  L+ G  + N    +F  + T     P     YA  +       N   +
Sbjct: 21  TQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIP-----YATTIFNHTHHPNILLF 75

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N++++A+S S  P H     S   F L + TH +  PDNFTFP +LK  + L+    G+ 
Sbjct: 76  NSIIKAHS-SFPPFHQ----SFHFFNLMKMTHNI-LPDNFTFPPLLKATSYLRDYDLGQC 129

Query: 124 LHGFITKMGFG-------------SDC------------------YIMNALIHMYSVFGD 152
           LH  +T +GF              S+C                   + N +I+ +   GD
Sbjct: 130 LHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGD 189

Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRA 212
           L +  +LF RM  R VVSW  +I  L    +  EA  +F  MLE G E +DAT+V+VL  
Sbjct: 190 LEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPV 249

Query: 213 CADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX 272
           CA  G +  G  +H     K  +    +V  +L+D Y K G +E+A              
Sbjct: 250 CARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVS 309

Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
           W AMISGL  +G  +  ++LF +M    V P + T   VL+ C +A  V +   +F  M 
Sbjct: 310 WNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMT 369

Query: 333 KRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA 392
            ++ + P ++H+GCVVDLL R G +KEA D +  MP+ P+A LW  L+ AC+ H D E A
Sbjct: 370 VKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVA 429

Query: 393 ERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
           E   K+ + +   +SG+Y+L SNVYA   KW+   +VR LM   G+ K PG S ++
Sbjct: 430 EIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQSALQ 485


>Medtr7g093900.2 | PPR containing plant-like protein | HC |
           chr7:37366165-37359102 | 20130731
          Length = 663

 Score =  249 bits (635), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 254/519 (48%), Gaps = 42/519 (8%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           +  T+ E   ++  + K+G       RN   L  F A    G L  AR +   +   +  
Sbjct: 156 QFETVFEGESVYCVVWKMGFDCELLVRN--GLIHFYA--ERGLLKNARQVFDESSDKDVV 211

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            + TM+  Y+      H     ++ +F L   +H    P+  T   V+  C+ +     G
Sbjct: 212 TWTTMIDGYA-----AHDCSEEAMEVFELMLLSH--VEPNEVTLIAVVSACSDMGNLEMG 264

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV-- 179
           K++H  + +        + NAL+ MY     L  ARELFDRM  +DV SWTS+++G    
Sbjct: 265 KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKC 324

Query: 180 -----------------------------DHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
                                         +++P E+++LF  M+E GV   + T+VSVL
Sbjct: 325 GDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVL 384

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
            AC     L++G  +H      K I     +  A++DMYAK G I++A            
Sbjct: 385 SACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNL 444

Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
             W  MI+G A++G  K+AI++F +M     +P+  T  ++L+AC +  L+ E    F +
Sbjct: 445 ISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDN 504

Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
           M+++YGI+P   H+ C+VDLL R G L+EA   +  MPM+P    W  L+ AC++H + E
Sbjct: 505 MERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVE 564

Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
            A       L +  +DSG Y+L +N  A+  KWS+   VR LM  KG+ K PG S IE+D
Sbjct: 565 LARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEID 624

Query: 451 GALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKL 489
           G   EF++ D +HP+++ I+  L+E++   K E Y+  L
Sbjct: 625 GGFVEFLVADESHPQSEEIYKVLEEILLLSKLEDYSYDL 663



 Score =  204 bits (518), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 229/476 (48%), Gaps = 55/476 (11%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           +TM +  Q+ A++   G   +  P   S++  F AL+ SGDL+YA  +       N++ +
Sbjct: 55  STMRQLKQIQARMTLTGIITHAFP--VSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMW 112

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           NTM+R Y  +  P     A S F++M +         D+ +F F LK C + +   +G+ 
Sbjct: 113 NTMIRGYQNARKP---IFAFSFFVYMFQLRVE----MDSRSFVFALKACQQFETVFEGES 165

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           ++  + KMGF  +  + N LIH Y+  G L  AR++FD   D+DVV+WT++IDG   HD 
Sbjct: 166 VYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDC 225

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             EA+E+F  ML + VE N+ T+++V+ AC+D G L MG++VH  V+EK  + C  ++  
Sbjct: 226 SEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKN-MRCSLSLHN 284

Query: 244 ALIDMYAKSGC-------------------------------IESAXXXXXXXXXXXXXX 272
           AL+DMY K  C                               +ESA              
Sbjct: 285 ALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVC 344

Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN------ADLVREAYM 326
           W+AMI+G + +   KE++ LF EM    V P E T+ +VLSAC         D + + ++
Sbjct: 345 WSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFV 404

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           V   +     +E  I      VD+ A+ G +  A +  + MP + + + W T+I     +
Sbjct: 405 VGKIIPLSVTLENAI------VDMYAKCGSIDAATEVFSTMPER-NLISWNTMIAGYAAN 457

Query: 387 EDTERAERLMKQHLEMGVDDSG-SYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
              ++A  +  Q   MG + +  +++      +  G  S   E  + M +K  IKP
Sbjct: 458 GRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKP 513


>Medtr3g466010.1 | PPR containing plant-like protein | HC |
           chr3:27120018-27122473 | 20130731
          Length = 536

 Score =  249 bits (635), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 166/522 (31%), Positives = 255/522 (48%), Gaps = 49/522 (9%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           T+++  Q HA+I+  G S +      +          +  LNY+  +  S  +     +N
Sbjct: 20  TLNQIKQTHAKIILSGQSQS----RLTIHILSLLSLSTSPLNYSLSIFNSISSQTVLAFN 75

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLK---LARQG 121
           +++R ++     +   ++LSL+  M RR  +     +  TF F+L  C + K       G
Sbjct: 76  SIIRIHA--KSNSSPSNSLSLYSSMRRRFLNA----NQHTFTFLLHACTKGKDCFNIVSG 129

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMY-----------SVF-------------------- 150
            Q+H  + K+G+  + ++ NALIH Y            VF                    
Sbjct: 130 VQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAG 189

Query: 151 ----GDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
               G++  A ++FD MP RDVVSW+S+I G V + +  + +E F  M E G+  N++ +
Sbjct: 190 LVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESIL 249

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
           V++L A A  G L  GR VH  + E  R      + T L+DMYAK GCIE +        
Sbjct: 250 VTMLSASAQLGLLGWGRFVHSTI-ESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDGMM 308

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                 WT MI GLASH   KEA+ LF E      +P       VL+AC  A LV E   
Sbjct: 309 ERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGRY 368

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
            F  M   YGI P ++H+GC+VDL ARAG + EA   +  M ++PD V+W TL+ AC++H
Sbjct: 369 YFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETMTVEPDPVMWATLLDACEIH 428

Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
              E  E++  + ++M     G Y+  + +YA   KW +   VR LM ++  IK  G S 
Sbjct: 429 GFVEMGEKIGNKLIKMDPTHDGHYVQLAGIYAKSRKWDDVVRVRRLMVERVPIKVAGWSL 488

Query: 447 IEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK 488
           IEV+  +H FV GD +H  + +I+  L+ +   + + G +PK
Sbjct: 489 IEVEDRVHRFVAGDRDHDHSSDIYKMLEIIGLMVSEAGCSPK 530


>Medtr4g074150.2 | PPR containing plant-like protein | HC |
           chr4:28198214-28202779 | 20130731
          Length = 606

 Score =  248 bits (634), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/475 (33%), Positives = 247/475 (52%), Gaps = 17/475 (3%)

Query: 10  LQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
             ++AQ+ KLG  ++    N       +A   SG +  A  +   +P  +   +  ++  
Sbjct: 126 FMVYAQVFKLGFDHDCFVCNG----FISAFGCSGFMKNACKVFDESPERDIVAWTALING 181

Query: 70  YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
           +  +  P     AL  F+ M  +   GV   D FT   VL+  A +     GK++HGF  
Sbjct: 182 FVKNGVPGE---ALRCFVEMRLK---GV-VIDGFTVASVLRAAALVGDYCFGKRVHGFYV 234

Query: 130 KMG-FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
           + G    D  +  AL+ MY   G    A ++FD MP RDVV+WT ++ G V   +  +A+
Sbjct: 235 ETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDAL 294

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALI 246
             F RML   V  N+ T+ SVL ACA  GAL  GR VH  ++     +C  N  + T+L+
Sbjct: 295 SFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHN---DCNLNAVLGTSLV 351

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
           DMYAK GC++ A              WTAMI+GLA HG    A+++F  M    ++P++ 
Sbjct: 352 DMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDV 411

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           T   VL AC +   V E   +F  M+  Y ++P ++H+GC+VDLL RAGCL++A+  ++ 
Sbjct: 412 TFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDN 471

Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNK 426
           MPMKP   +   L+ AC  H+D    E +    + +  + +  Y L +N+Y++   W   
Sbjct: 472 MPMKPSPGVLGALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAV 531

Query: 427 AEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
           A VR+LM    + K PG S IEV G++HEF   D++H E   +++ L+ ++ ++K
Sbjct: 532 ARVRKLMKGTQVEKTPGYSWIEVAGSMHEFKAFDHSHSEFSCVYLMLENLILQMK 586


>Medtr4g074150.1 | PPR containing plant-like protein | HC |
           chr4:28198256-28202779 | 20130731
          Length = 606

 Score =  248 bits (634), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/475 (33%), Positives = 247/475 (52%), Gaps = 17/475 (3%)

Query: 10  LQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRA 69
             ++AQ+ KLG  ++    N       +A   SG +  A  +   +P  +   +  ++  
Sbjct: 126 FMVYAQVFKLGFDHDCFVCNG----FISAFGCSGFMKNACKVFDESPERDIVAWTALING 181

Query: 70  YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
           +  +  P     AL  F+ M  +   GV   D FT   VL+  A +     GK++HGF  
Sbjct: 182 FVKNGVPGE---ALRCFVEMRLK---GV-VIDGFTVASVLRAAALVGDYCFGKRVHGFYV 234

Query: 130 KMG-FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
           + G    D  +  AL+ MY   G    A ++FD MP RDVV+WT ++ G V   +  +A+
Sbjct: 235 ETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDAL 294

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN--VSTALI 246
             F RML   V  N+ T+ SVL ACA  GAL  GR VH  ++     +C  N  + T+L+
Sbjct: 295 SFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHN---DCNLNAVLGTSLV 351

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
           DMYAK GC++ A              WTAMI+GLA HG    A+++F  M    ++P++ 
Sbjct: 352 DMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDV 411

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           T   VL AC +   V E   +F  M+  Y ++P ++H+GC+VDLL RAGCL++A+  ++ 
Sbjct: 412 TFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDN 471

Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNK 426
           MPMKP   +   L+ AC  H+D    E +    + +  + +  Y L +N+Y++   W   
Sbjct: 472 MPMKPSPGVLGALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAV 531

Query: 427 AEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
           A VR+LM    + K PG S IEV G++HEF   D++H E   +++ L+ ++ ++K
Sbjct: 532 ARVRKLMKGTQVEKTPGYSWIEVAGSMHEFKAFDHSHSEFSCVYLMLENLILQMK 586


>Medtr8g098250.1 | PPR containing plant-like protein | HC |
           chr8:40970486-40967324 | 20130731
          Length = 998

 Score =  248 bits (632), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/483 (32%), Positives = 249/483 (51%), Gaps = 13/483 (2%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYY 62
           +  + +  Q+HA  +K+   N+D  +N   L    A   S  L  AR +     A++   
Sbjct: 356 LVALEKGRQVHAYAIKVNIDNDDFVKN--GLIDMYAKCDS--LTDARKVFNLMAAIDLVS 411

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           YN M+  YS          AL LF    R     + +P    F  +L   A L       
Sbjct: 412 YNAMIEGYSRQDKLCE---ALDLF----REMRLSLSSPTLLIFVSLLGVSASLYHLELSN 464

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           Q+HG I K G   D +  +ALI +YS    +G AR +F+ + D+D+V WT++  G     
Sbjct: 465 QIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQS 524

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              E+++L+  +  + ++ N+ T  +V+ A ++  +L  G++ H  V  K   +    V+
Sbjct: 525 ENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVI-KMGFDDDPFVA 583

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
             L+DMYAKSG IE A              W +MI+  A HG  ++A+ +F +M    +K
Sbjct: 584 NTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLK 643

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           P+  T   VLSAC +  L+   +  F  M + +GIEP I+H+ C+V LL RAG L EA++
Sbjct: 644 PNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKE 702

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGK 422
           F+  MP+K  AV+WR+L+ AC+V  + E      +  +     DSGSY+L SN++AS G 
Sbjct: 703 FIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGM 762

Query: 423 WSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKK 482
           W N   +RE M+  G++K PG S IEV+  +H+F+  D  H ++  I + LD ++ ++K 
Sbjct: 763 WVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKG 822

Query: 483 EGY 485
            GY
Sbjct: 823 FGY 825



 Score =  115 bits (289), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 180/426 (42%), Gaps = 21/426 (4%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           ++ ALQ+H  ++K G   +      + L  F   +    ++ ARLL        S+ + T
Sbjct: 157 LNPALQIHGLVVKGGYVQD--VYVCTSLIDF--YTKHACIDDARLLFDGLQVKTSFTWTT 212

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           ++  YS           +SL +F   +  H    PD +    VL  C  LK    GKQ+H
Sbjct: 213 IIAGYSKQGRSQ-----VSLKLFDQMKEGH--VCPDKYVLSSVLSACLMLKFLEGGKQIH 265

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
            ++ + G   D  ++N  I  Y     + + R+LFDRM D++VVSWT++I G + +    
Sbjct: 266 CYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHR 325

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
           +A++LF  M   G   +     SVL +C    AL  GR+VH     K  I+    V   L
Sbjct: 326 DALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAI-KVNIDNDDFVKNGL 384

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           IDMYAK   +  A              + AMI G +      EA+DLF EM      P  
Sbjct: 385 IDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTL 444

Query: 306 RTMTAVLSACRNADLVR-EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
               ++L    +A L   E       +  +YG+         ++D+ ++   + +A    
Sbjct: 445 LIFVSLLGV--SASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVF 502

Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
             +  K D V+W  +        + E + +L K  L+M       +  A+ + A+    S
Sbjct: 503 EEIQDK-DIVVWTAMFSGYTQQSENEESLKLYKC-LQMSRLKPNEFTFAAVITAA----S 556

Query: 425 NKAEVR 430
           N A +R
Sbjct: 557 NIASLR 562



 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 160/364 (43%), Gaps = 25/364 (6%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           ++H++I+  G   +D     + L  ++ L+    +N+A  L  +    N   +++M+  Y
Sbjct: 59  KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNL---VNHANKLFDTMSHKNLVTWSSMVSMY 115

Query: 71  SLSSDPTHHFH---ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
                 THH H   AL LF+  +R        P+ +    V++ C +        Q+HG 
Sbjct: 116 ------THHSHCLEALMLFVQFMRSCNE---KPNEYILASVVRACTQFGGLNPALQIHGL 166

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           + K G+  D Y+  +LI  Y+    +  AR LFD +  +   +WT++I G     R   +
Sbjct: 167 VVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVS 226

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           ++LF +M E  V  +   + SVL AC     L  G+++H  V  +  I    ++    ID
Sbjct: 227 LKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVL-RSGIVMDVSMVNGFID 285

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
            Y K   ++                WT +I+G   +   ++A+DLF+EM      PD   
Sbjct: 286 FYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFG 345

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV----VDLLARAGCLKEAEDF 363
            T+VL++C +   + +   V +     Y I+  I +   V    +D+ A+   L +A   
Sbjct: 346 CTSVLNSCGSLVALEKGRQVHA-----YAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKV 400

Query: 364 MNAM 367
            N M
Sbjct: 401 FNLM 404


>Medtr8g066250.1 | PPR containing plant-like protein | HC |
           chr8:27517637-27514893 | 20130731
          Length = 728

 Score =  247 bits (630), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 133/358 (37%), Positives = 208/358 (58%), Gaps = 2/358 (0%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D    NA+++ Y+V G++ +  ++FD MP+R+V SW  LI G V +    E +E F RML
Sbjct: 237 DTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRML 296

Query: 196 -EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGC 254
            E  V  ND T+V+VL AC+  GAL MG+ VH +  E    +    V   LIDMYAK G 
Sbjct: 297 VEGHVIPNDFTLVAVLSACSRLGALDMGKWVH-VYAESIGYKGNLFVGNVLIDMYAKCGV 355

Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
           IE+A              W  +I+GLA HG   +A+ +F  M++   +PD  T   +LSA
Sbjct: 356 IENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSA 415

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C +  LV++ ++ F  M   Y I P I+H+GC+VDLL RAG L +A +F+  MP++PDAV
Sbjct: 416 CTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAV 475

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           +W  L+ AC+++++ E AE  +++ +E+  ++  ++++ SN+Y  +G+  + A ++  M 
Sbjct: 476 IWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMR 535

Query: 435 KKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEV 492
             G  K PG S IE + ++ EF   D  H E ++I+  L  +   L+  GY P LS+V
Sbjct: 536 DTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGYVPNLSDV 593



 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 172/380 (45%), Gaps = 29/380 (7%)

Query: 11  QLHAQILKLGTSNND--APRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
           Q+ AQI+  G  +ND  AP NF         S    +++AR L    P  N+  +N M R
Sbjct: 30  QIQAQIVTHGLEHNDFVAP-NF-----ITTCSRFKRIHHARKLFDKIPQPNTATWNAMFR 83

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
            Y  +    HH   + LF  + R        P+ FTFP ++K C +L+  R+G+++H   
Sbjct: 84  GYLQNG---HHRDTVVLFGELNRIAG----MPNCFTFPMIIKSCGKLEGVREGEEVHCCA 136

Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
           TK GF S+ ++  +LI MYS  G +  A ++F  M +R+VV WT++I+G +     V   
Sbjct: 137 TKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGR 196

Query: 189 ELFGRMLEAGVEVNDATVVSVL-RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
            LF    E      D  + SVL     +S  ++  R++   +  +  +        A+++
Sbjct: 197 RLFDLAPE-----RDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSW-----NAMLN 246

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNVKPDER 306
            YA +G +E                W  +I G   +GL  E ++ F  M    +V P++ 
Sbjct: 247 GYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDF 306

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           T+ AVLSAC     +     V     +  G +  +     ++D+ A+ G ++ A    N 
Sbjct: 307 TLVAVLSACSRLGALDMGKWVHV-YAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNC 365

Query: 367 MPMKPDAVLWRTLIWACKVH 386
           +  K D + W T+I    +H
Sbjct: 366 LDRK-DIISWNTIINGLAIH 384



 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 46/278 (16%)

Query: 42  SGDLNYARLLLTSNPALNSYYYNTMLRAY---SLSSDPTHHFHALSLFIFMLRRPTHGVP 98
           +G++     +    P  N + +N ++  Y    L S+    F          R    G  
Sbjct: 251 NGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFK---------RMLVEGHV 301

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
            P++FT   VL  C+RL     GK +H +   +G+  + ++ N LI MY+  G +  A  
Sbjct: 302 IPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVV 361

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           +F+ +  +D++SW ++I+GL  H    +A+ +F RM   G E +  T V +L AC     
Sbjct: 362 VFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACT---- 417

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
             MG    G +  K           +++D Y+    IE                +  M+ 
Sbjct: 418 -HMGLVKDGFLYFK-----------SMVDHYSIVPQIEH---------------YGCMVD 450

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR 316
            L   GL  +A++   +M    ++PD     A+L ACR
Sbjct: 451 LLGRAGLLDQALNFIRKMP---IEPDAVIWAALLGACR 485


>Medtr7g005870.1 | PPR containing plant-like protein | HC |
           chr7:378521-375734 | 20130731
          Length = 601

 Score =  246 bits (629), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 199/326 (61%), Gaps = 3/326 (0%)

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML-EAGVE 200
           +++H YS  GD+  AR LFD MP+++V+SW ++I G   + R  +A++LF  M     VE
Sbjct: 256 SMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVE 315

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
           +N+ TVVSVL A AD  AL +G  VHG V ++ +++   +V  AL+DMYAK G I  A  
Sbjct: 316 MNEVTVVSVLPAVADLSALDLGGWVHGFV-QRNQLDGSVHVCNALVDMYAKCGEIGKAKL 374

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W A+I+G   +G  KEA+++F  M     +P++ TMT+VLSAC +  L
Sbjct: 375 VFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGL 434

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           V E    F  M+ R+GI P I+H+GC++DLL RAG L EAE  + AMP  P+ ++  + +
Sbjct: 435 VEEGRRCFEAME-RFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFL 493

Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
           +AC   ED  RAER++K  ++M  + +G Y++  N+YA+  +W++  +V+E+M K+G  K
Sbjct: 494 FACCYFEDVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNK 553

Query: 441 PPGSSRIEVDGALHEFVMGDYNHPEA 466
               S IEVDG   EFV G Y+H  +
Sbjct: 554 EVAWSVIEVDGRFREFVAGYYSHSHS 579



 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 20/339 (5%)

Query: 45  LNYARLLLTSNP--ALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           + +ARL     P    + +  NT++ A+       H F   + F             P +
Sbjct: 70  VQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQF------SKDCFFRPSS 123

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           +TF  +LK C+     RQG Q+HG + K  F  D Y+  +L+ MY  FGD+G AR++FD 
Sbjct: 124 YTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDE 183

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M  R +VSWT++I G       VEA +LF  M++  V   +  +   ++     G + + 
Sbjct: 184 MSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKM----GRMDLA 239

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
           R +   ++ K  I       T+++  Y++ G ++ A              W AMI G   
Sbjct: 240 RDLFDKMRVKNVISW-----TSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQ 294

Query: 283 HGLCKEAIDLFLEME-TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
           +G   +A+ LF EM    +V+ +E T+ +VL A  +   +     V     +R  ++ ++
Sbjct: 295 NGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHG-FVQRNQLDGSV 353

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
                +VD+ A+ G + +A+     M  K D   W  LI
Sbjct: 354 HVCNALVDMYAKCGEIGKAKLVFEEMTEK-DTGSWNALI 391



 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 40  SPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA 99
           S  GD++ AR L    P  N   +N M+R Y   +  +H   AL LF  M  R    V  
Sbjct: 262 SEDGDVDEARFLFDCMPEKNVLSWNAMIRGYC-QNGRSHD--ALKLFCEM--RGNVDVEM 316

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
            +  T   VL   A L     G  +HGF+ +       ++ NAL+ MY+  G++G A+ +
Sbjct: 317 -NEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLV 375

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+ M ++D  SW +LI+G   +    EA+E+F  ML  G E N  T+ SVL AC   G +
Sbjct: 376 FEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLV 435

Query: 220 SMGRKV------HGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
             GR+        GIV + +   C       +ID+  ++G ++ A
Sbjct: 436 EEGRRCFEAMERFGIVPQIEHYGC-------MIDLLGRAGRLDEA 473


>Medtr7g108530.1 | PPR containing plant-like protein | HC |
           chr7:44212645-44210679 | 20130731
          Length = 467

 Score =  245 bits (626), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 145/412 (35%), Positives = 226/412 (54%), Gaps = 10/412 (2%)

Query: 45  LNYARLLLTS-NPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
           LNY   L T   P  + + +N+++RA+S S  P      LSL+  M +        P+NF
Sbjct: 58  LNYVSPLFTHLIPKPHVFIFNSLIRAFSHSHIPNT---PLSLYSHMHKNSI----LPNNF 110

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           TFPF+ K  +      Q + ++  + K+G+ +D Y+ N+L+ +Y+ +G L + R+LFD M
Sbjct: 111 TFPFLFKSLSDSHDFVQSQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEM 170

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
           P RDVVSWT +I G  +  +  +A+ +F +M   GV  N  T+V+ L ACA S A+ MG 
Sbjct: 171 PQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGV 230

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
            +  +V+ +   E    + TALIDMY K G +E                   +I GLA  
Sbjct: 231 WIDDMVR-RNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALA 289

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM-KKRYGIEPTIQ 342
              +EA+  F  ME   V+ DE T+  VLSAC ++ LV +   +FS +   +YG  P ++
Sbjct: 290 KSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNVK 349

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
           H+ C+VDLLARAG L+EA D +  MP +P A +W +L+   K  +D E +E    + +E+
Sbjct: 350 HYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLLLGSKSRDDLEFSEFAATKLVEL 409

Query: 403 GVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALH 454
              ++  Y+  SN+YA  G+WS+   +R +M ++GL K  G S +EV+   H
Sbjct: 410 EPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLTKDLGCSSVEVEHQRH 461


>Medtr2g049310.1 | PPR containing plant-like protein | HC |
           chr2:21732028-21729769 | 20130731
          Length = 717

 Score =  245 bits (626), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 152/476 (31%), Positives = 250/476 (52%), Gaps = 17/476 (3%)

Query: 1   MEVTTMSEALQLHAQILKLGTSNN---DAPRNFSKLFTFAALSPSGDLNYARLLLTSNPA 57
           +  T  S +L++   +  L  ++N   +   N + L  +A L    D   ARL+    P 
Sbjct: 224 LRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKD---ARLMFEKMPE 280

Query: 58  LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL 117
            +   +N M+  YS S  P     +L L   M+R        PD FT    +    +LK 
Sbjct: 281 KDVVVWNIMISVYSGSGCPKE---SLELVYCMVRSGIR----PDMFTAIPAISSITKLKS 333

Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
              GKQLH  + + G      + N+L+ MYS   DL  AR++F  + DR VVSW+++I G
Sbjct: 334 IEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKG 393

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
              HD  +EA+ LF  M  +G +V+   V+++L A A  GAL     +HG    K  ++ 
Sbjct: 394 YAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHG-YSLKTNLDS 452

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX--XXWTAMISGLASHGLCKEAIDLFLE 295
             ++ T+L++ YAK GCIE A                W +MI+  ++HG   +  +L+ +
Sbjct: 453 LKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQ 512

Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
           ++   VKPD  T   +L+AC N+ LV +   +F +M   YG +P+ +H  C+VDLL RAG
Sbjct: 513 IKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAG 572

Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLIWACKVHE-DTERAERLMKQHLEMGVDDSGSYILAS 414
            + EA   +    +  DA ++  L+ ACK+H  +T+ AE   ++ ++M  ++  +Y+L S
Sbjct: 573 KIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKMEPENPANYVLLS 632

Query: 415 NVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIF 470
           N++A+ GKW   A++R  +  +GL K PG S + +DG  HEF + D++HP +++I+
Sbjct: 633 NIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADHSHPRSEDIY 688



 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 132/301 (43%), Gaps = 5/301 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++ T   +L+        + GK LH  +       +  +  AL+ MY+    L  AR +
Sbjct: 215 PNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLM 274

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F++MP++DVV W  +I        P E++EL   M+ +G+  +  T +  + +     ++
Sbjct: 275 FEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSI 334

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G+++H  V      + + +V  +L+DMY+    + SA              W+AMI G
Sbjct: 335 EWGKQLHAQVIRNGS-DYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKG 393

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA-CRNADLVREAYMVFSDMKKRYGIE 338
            A H  C EA+ LF+EM+    K D   +  +L A  +   L    Y+    +K      
Sbjct: 394 YAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSL 453

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK-PDAVLWRTLIWACKVHEDTERAERLMK 397
            +++    +++  A+ GC++ A    N       D V W ++I A   H +  +   L  
Sbjct: 454 KSLK--TSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYN 511

Query: 398 Q 398
           Q
Sbjct: 512 Q 512


>Medtr2g082550.1 | PPR containing plant-like protein, putative | HC
           | chr2:34637734-34634734 | 20130731
          Length = 631

 Score =  245 bits (625), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/481 (31%), Positives = 233/481 (48%), Gaps = 80/481 (16%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D  T   +L  CA LK  + GK +HGF  + G   + ++ NAL+++Y+    +  A  +F
Sbjct: 161 DPVTVSSILPACADLKDLKSGKAIHGFAVRNGMVENVFVCNALVNLYAKCLCVREAHAIF 220

Query: 161 DRMPDRDVVSWTSLI--------------------DGLVDHDRPVEAIELFGRMLEAGVE 200
           D MP RDVVSW+ ++                    DG+  ++   +A+E+  +M   G +
Sbjct: 221 DLMPHRDVVSWSGVLTYFTNKEYEKGLSLFSQMCRDGVETNEVTWKAMEMLRKMQNMGFK 280

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
            N+ T+ S+L+AC  S +L M +++H  V    ++         + DM A    +     
Sbjct: 281 PNEITISSILQACYLSESLRMCKEIHYYVFRHWKV-------WNVFDMIAIKDVV----- 328

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       WT MI+  A HG  KEA+ LF +M    VKPD  T   VLS+C ++ L
Sbjct: 329 -----------AWTTMINANAMHGNGKEALFLFEKMLLSMVKPDSVTFICVLSSCSHSRL 377

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           V E   +F+ M K + +EP   H+ CVVD+ +RAG L EA +F+  MPM P A  W++L+
Sbjct: 378 VEEGVQIFNSMSKDHLVEPNAIHYSCVVDIYSRAGRLNEAYEFIQRMPMGPTAGAWKSLL 437

Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
             C+V+++ E A+   K+  E+    S  Y+   N+  +   WS  +++R  M + G+ K
Sbjct: 438 AGCRVYKNVELAKISAKKLFEIEPSRSRDYVALCNILVTAKLWSEASKIRMFMKESGITK 497

Query: 441 PPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE 500
            PG S + V   +H FV G                                     D +E
Sbjct: 498 TPGCSWLHVGNRVHNFVAG-------------------------------------DKKE 520

Query: 501 KATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRI 560
           K   L  HSEKLA+A+G++  +  S IR+ KNLR C DCH  +K ++K+    I+VRD  
Sbjct: 521 KVESLCKHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMAKVVDVMIVVRDSF 580

Query: 561 R 561
           R
Sbjct: 581 R 581



 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 35/257 (13%)

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           AR+LFD +P  D  + ++LI  L  H    EAI +   + E G++++    ++V +ACA 
Sbjct: 31  ARQLFDNIPQPDPTTSSTLISALTTHGLLNEAINICTSLRERGIKLDIPVFMAVAKACAA 90

Query: 216 S-GALSMGRKVHGIVKEKKRIECKCN------VSTALIDMYAKSGCIESAXXXXXXXXXX 268
           S  AL+        VKE      +C       V  ALI  Y K  C+E            
Sbjct: 91  SRDALN--------VKELHNDATRCGAMFNVFVGNALIHAYGKCKCVEGERRVFDDMVVR 142

Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
                   + GL          ++F EM    VK D  T++++L AC +   ++    + 
Sbjct: 143 D-------VKGL----------NVFHEMGWNGVKLDPVTVSSILPACADLKDLKSGKAIH 185

Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
                R G+   +     +V+L A+  C++EA    + MP + D V W  ++     +++
Sbjct: 186 G-FAVRNGMVENVFVCNALVNLYAKCLCVREAHAIFDLMPHR-DVVSWSGVL-TYFTNKE 242

Query: 389 TERAERLMKQHLEMGVD 405
            E+   L  Q    GV+
Sbjct: 243 YEKGLSLFSQMCRDGVE 259



 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 22/170 (12%)

Query: 89  MLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS 148
           MLR+  +    P+  T   +L+ C   +  R  K++H                     Y 
Sbjct: 270 MLRKMQNMGFKPNEITISSILQACYLSESLRMCKEIH---------------------YY 308

Query: 149 VFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS 208
           VF    V   +FD +  +DVV+WT++I+    H    EA+ LF +ML + V+ +  T + 
Sbjct: 309 VFRHWKVW-NVFDMIAIKDVVAWTTMINANAMHGNGKEALFLFEKMLLSMVKPDSVTFIC 367

Query: 209 VLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           VL +C+ S  +  G ++   + +   +E      + ++D+Y+++G +  A
Sbjct: 368 VLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSCVVDIYSRAGRLNEA 417


>Medtr3g037470.1 | TPR superfamily protein | HC |
           chr3:13772234-13768538 | 20130731
          Length = 424

 Score =  244 bits (622), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/374 (36%), Positives = 206/374 (55%), Gaps = 5/374 (1%)

Query: 77  THHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ-GKQLHGFITKMGFGS 135
            +H   + LF  +L + +    + D+F+F + LK C     +   GKQLH  I K G+ S
Sbjct: 50  NNHTTVVLLFKTLLEQKSPTFNSIDSFSFLYTLKACINKNHSYVLGKQLHSLIIKFGYES 109

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
              +  +L+ +Y+  G+L  A ++FD +P+++++ WTSLI   V++ +  + +ELF  ML
Sbjct: 110 IIQLQTSLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLML 169

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
              VE +   + + L ACAD+G L MG  +H  V+ K+ ++   +++ ALI+MYAK G I
Sbjct: 170 MNNVEPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDI 229

Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
            +A              WT+MI G A HG  +EA+ LF EM    V P++ T   VL AC
Sbjct: 230 GNARKLFDNTRNKDVTTWTSMIVGHAVHGEAREALQLFSEMNFI-VSPNDVTFIGVLMAC 288

Query: 316 RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
            +A LV E    F  M + YGIEP   HFGC+VDL  R+G L+EA DF+  MP+ P+AV+
Sbjct: 289 SHAGLVEEGKRNFRSMNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEMPVPPNAVM 348

Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNK 435
           WRTL+ AC +H + + A  +  + + +     G  +  SN+YA    W  K  VR  + +
Sbjct: 349 WRTLLGACSLHGNLKLATEVRDKLINLDPGYVGDSVALSNIYADKEMWDKKIIVRNQIKQ 408

Query: 436 KGLIKPPGSSRIEV 449
               K  G S IEV
Sbjct: 409 S---KAHGFSSIEV 419


>Medtr7g093900.1 | PPR containing plant-like protein | HC |
           chr7:37365900-37360699 | 20130731
          Length = 854

 Score =  244 bits (622), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 244/500 (48%), Gaps = 42/500 (8%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           +  T+ E   ++  + K+G       RN   L  F A    G L  AR +   +   +  
Sbjct: 106 QFETVFEGESVYCVVWKMGFDCELLVRN--GLIHFYA--ERGLLKNARQVFDESSDKDVV 161

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            + TM+  Y+      H     ++ +F L   +H    P+  T   V+  C+ +     G
Sbjct: 162 TWTTMIDGYA-----AHDCSEEAMEVFELMLLSH--VEPNEVTLIAVVSACSDMGNLEMG 214

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV-- 179
           K++H  + +        + NAL+ MY     L  ARELFDRM  +DV SWTS+++G    
Sbjct: 215 KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKC 274

Query: 180 -----------------------------DHDRPVEAIELFGRMLEAGVEVNDATVVSVL 210
                                         +++P E+++LF  M+E GV   + T+VSVL
Sbjct: 275 GDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVL 334

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
            AC     L++G  +H      K I     +  A++DMYAK G I++A            
Sbjct: 335 SACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNL 394

Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSD 330
             W  MI+G A++G  K+AI++F +M     +P+  T  ++L+AC +  L+ E    F +
Sbjct: 395 ISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDN 454

Query: 331 MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTE 390
           M+++YGI+P   H+ C+VDLL R G L+EA   +  MPM+P    W  L+ AC++H + E
Sbjct: 455 MERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVE 514

Query: 391 RAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
            A       L +  +DSG Y+L +N  A+  KWS+   VR LM  KG+ K PG S IE+D
Sbjct: 515 LARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEID 574

Query: 451 GALHEFVMGDYNHPEADNIF 470
           G   EF++ D +HP+++ I+
Sbjct: 575 GGFVEFLVADESHPQSEEIY 594



 Score =  203 bits (517), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 229/476 (48%), Gaps = 55/476 (11%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           +TM +  Q+ A++   G   +  P   S++  F AL+ SGDL+YA  +       N++ +
Sbjct: 5   STMRQLKQIQARMTLTGIITHAFP--VSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMW 62

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           NTM+R Y  +  P     A S F++M +         D+ +F F LK C + +   +G+ 
Sbjct: 63  NTMIRGYQNARKP---IFAFSFFVYMFQLRVE----MDSRSFVFALKACQQFETVFEGES 115

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           ++  + KMGF  +  + N LIH Y+  G L  AR++FD   D+DVV+WT++IDG   HD 
Sbjct: 116 VYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDC 175

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             EA+E+F  ML + VE N+ T+++V+ AC+D G L MG++VH  V+EK  + C  ++  
Sbjct: 176 SEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKN-MRCSLSLHN 234

Query: 244 ALIDMYAKSGC-------------------------------IESAXXXXXXXXXXXXXX 272
           AL+DMY K  C                               +ESA              
Sbjct: 235 ALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVC 294

Query: 273 WTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN------ADLVREAYM 326
           W+AMI+G + +   KE++ LF EM    V P E T+ +VLSAC         D + + ++
Sbjct: 295 WSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFV 354

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           V   +     +E  I      VD+ A+ G +  A +  + MP + + + W T+I     +
Sbjct: 355 VGKIIPLSVTLENAI------VDMYAKCGSIDAATEVFSTMPER-NLISWNTMIAGYAAN 407

Query: 387 EDTERAERLMKQHLEMGVDDSG-SYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
              ++A  +  Q   MG + +  +++      +  G  S   E  + M +K  IKP
Sbjct: 408 GRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKP 463


>Medtr4g014050.1 | PPR containing plant-like protein | HC |
           chr4:3891221-3897546 | 20130731
          Length = 935

 Score =  241 bits (616), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 214/404 (52%), Gaps = 10/404 (2%)

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
           +P+ +TF  V+  CA L + + G+Q+HG   ++G      + N++I +YS  G L  A  
Sbjct: 350 SPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASL 409

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           +FD M  +D++SW+++I          EA      M   G + N+  + SVL  C     
Sbjct: 410 VFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMAL 469

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           L  G++VH        ++ +  V +ALI MY++SG ++ A              WTAMI+
Sbjct: 470 LEPGKQVHAYAL-CIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMIN 528

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
           G A HG  +EAI LF  + +  + PD  T   +L+AC +A LV   +  +  M   Y I 
Sbjct: 529 GYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIA 588

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
           P+ +H+GC++DLL RAG L EAE  +  MP   D V+W TL+ AC+ H D +RA    +Q
Sbjct: 589 PSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQ 648

Query: 399 HLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVM 458
            L +  + +G++I  +N+Y++ G+    A VR+LM  KG+IK PG S I  +  L+ FV 
Sbjct: 649 MLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVA 708

Query: 459 GDYNHP--EADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE 500
           G  +HP  +A+N F+         KK     +LS  +  +D+E+
Sbjct: 709 GVQSHPLKDAENTFL-------SSKKRAAEQELSRDIPLLDEED 745



 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 138/323 (42%), Gaps = 7/323 (2%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
            LS F  M R         D+ TF   LK  A   L   GK +H    K GF    Y++N
Sbjct: 236 GLSYFSEMWRSKV----GYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVN 291

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
            L  MYS          LF +M   DVVSWT+LI   V       A++ F RM ++ V  
Sbjct: 292 TLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSP 351

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           N+ T  SV+ ACA+      G ++HG       ++   +VS ++I +Y+K G ++ A   
Sbjct: 352 NEYTFASVISACANLAITKWGEQIHGHALRLGLVDA-LSVSNSIITLYSKCGLLQEASLV 410

Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
                      W+ +IS        KEA +    M     KP+E  + +VLS C +  L+
Sbjct: 411 FDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALL 470

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
                V +      G++        ++ + +R+G L+EA    +++    D V W  +I 
Sbjct: 471 EPGKQVHA-YALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIK-NNDIVSWTAMIN 528

Query: 382 ACKVHEDTERAERLMKQHLEMGV 404
               H  ++ A  L +    +G+
Sbjct: 529 GYAEHGYSQEAISLFENISSVGL 551



 Score =  112 bits (280), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 124/280 (44%), Gaps = 3/280 (1%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D F     LK CA       G+ LHGF  K G  +  ++ +AL+ MY   G       +F
Sbjct: 150 DQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVF 209

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           + M  R+VVSWT++I GLV     ++ +  F  M  + V  +  T    L+A A+SG L 
Sbjct: 210 ENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLH 269

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G+ +H    ++   E    V+T L  MY+K    +                WT +I   
Sbjct: 270 YGKAIHAQTIKQGFNETAYVVNT-LGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTY 328

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
              G  + A+D F  M   +V P+E T  +V+SAC N  + +    +      R G+   
Sbjct: 329 VQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGH-ALRLGLVDA 387

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           +     ++ L ++ G L+EA    + M  K D + W T+I
Sbjct: 388 LSVSNSIITLYSKCGLLQEASLVFDGMTRK-DIISWSTII 426



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 11/248 (4%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+H   L+LG    DA    + + T    S  G L  A L+       +   ++T++  Y
Sbjct: 374 QIHGHALRLGLV--DALSVSNSIITL--YSKCGLLQEASLVFDGMTRKDIISWSTIISVY 429

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
              S     F+ LS   +M R      P P+ F    VL  C  + L   GKQ+H +   
Sbjct: 430 CQGSHAKEAFNYLS---WMSREG----PKPNEFALASVLSVCGSMALLEPGKQVHAYALC 482

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           +G   +  + +ALI MYS  G+L  A ++FD + + D+VSWT++I+G  +H    EAI L
Sbjct: 483 IGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISL 542

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F  +   G+  +  T + +L AC  +G + +G   + ++  + +I         +ID+  
Sbjct: 543 FENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLC 602

Query: 251 KSGCIESA 258
           ++G +  A
Sbjct: 603 RAGRLSEA 610



 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 125/295 (42%), Gaps = 15/295 (5%)

Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM-LEAG 198
           +N+ +      G +  AR++F++M  RD +SWT+LI G V+     EA+ LF  M +++G
Sbjct: 87  LNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSG 146

Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           ++ +   V   L+ACA    +  G  +HG   +   I     VS+AL+DMY K G  E  
Sbjct: 147 LQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLIN-SVFVSSALVDMYMKVGKTEQG 205

Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
                         WTA+I GL   G   + +  F EM    V  D  T    L A   +
Sbjct: 206 CSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAES 265

Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAVL 375
            L+     + +   K+ G   T      VV+ L          D++  +  K   PD V 
Sbjct: 266 GLLHYGKAIHAQTIKQ-GFNET----AYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVS 320

Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA----SVGKWSNK 426
           W  LI       D ERA    K+  +  V  +  Y  AS + A    ++ KW  +
Sbjct: 321 WTNLIMTYVQMGDEERALDAFKRMRKSDVSPN-EYTFASVISACANLAITKWGEQ 374


>Medtr8g102760.1 | PPR containing plant-like protein | HC |
           chr8:43261430-43259561 | 20130731
          Length = 447

 Score =  241 bits (615), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/409 (36%), Positives = 217/409 (53%), Gaps = 16/409 (3%)

Query: 44  DLN--YARLLLT----SNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGV 97
           DLN  YA +LLT    SNPA  S+ +N ++R+Y+    P +   AL +++ MLR    GV
Sbjct: 42  DLNQIYAHILLTRFLESNPA--SFNWNNIIRSYTRLESPQN---ALRIYVSMLRA---GV 93

Query: 98  PAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAR 157
             PD +T P VLK  ++    + G+Q+H +  K+G  S+ Y  +  I++Y   GD   A 
Sbjct: 94  -LPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAH 152

Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
           ++FD   +  + SW +LI GL      ++AI +F  M   G E +  T+VSV+ AC   G
Sbjct: 153 KVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIG 212

Query: 218 ALSMGRKVHGIVKEKKRIECKCNV-STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
            L +  ++H  V + K  E    + S +LIDMY K G ++ A              WT+M
Sbjct: 213 DLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSM 272

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           I G A HG  KEA+  F  M    VKP+  T   VLSAC +   V+E    F  MK  YG
Sbjct: 273 IVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYG 332

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           I P +QH+GC+VDLL RAG   +A   +  MPMKP++V+W  L+ AC+ H + + AE + 
Sbjct: 333 ITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVA 392

Query: 397 KQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
           +    +   + G Y++ SN+YA+ G W     +R  M +  L K P  S
Sbjct: 393 ENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPAYS 441


>Medtr1g084570.1 | PPR containing plant-like protein | HC |
           chr1:37638715-37636265 | 20130731
          Length = 606

 Score =  239 bits (611), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/488 (31%), Positives = 242/488 (49%), Gaps = 11/488 (2%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
           +H   +K+GT  +    + + +  +A    S  ++ ARL+       N+  + T++  Y+
Sbjct: 129 VHGLAIKIGTQGSSIYVDNALMDMYATCCDS--MDNARLVFEDIGTKNAVSWTTLITGYT 186

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
              D    F  L +F  M        P    F+F   +  CA +  +  GKQ+H  +   
Sbjct: 187 HRRDA---FGGLRVFRQMFMEEGELSP----FSFSIAVSACASIGSSNLGKQVHAAVINH 239

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
           GF S+  +MNA++ MY        A++LF  M  +D ++W +LI G    D   E++ +F
Sbjct: 240 GFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLD-SYESLCIF 298

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
            +M+  G   N  T  SV+ ACA+   L  G+++HG +  +  ++    +S ALIDMYAK
Sbjct: 299 SQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRG-LDNNLELSNALIDMYAK 357

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
            G +  +              WT+M+ G  +HG  KEA+DLF EM    +KPD+    AV
Sbjct: 358 CGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAV 417

Query: 312 LSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
           LSAC +A LV E    F  M   Y + P    + CVVDLL+RAG +KEA + +  MP KP
Sbjct: 418 LSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKP 477

Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRE 431
           D  +W  L+ ACK ++     +    + LEM  + +G+Y+L SN  A+ G W++ A +R+
Sbjct: 478 DESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRK 537

Query: 432 LMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSE 491
           LM      K  G S IE+   +  F++GD        +   L+ ++  +K  GY   L  
Sbjct: 538 LMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEVLELLIRHMKDAGYVLDLDC 597

Query: 492 VLLEIDDE 499
              +++DE
Sbjct: 598 SAHDLEDE 605



 Score =  120 bits (300), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 171/382 (44%), Gaps = 15/382 (3%)

Query: 27  PRNFSKLFT--FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALS 84
           P++ + L T    +    G    A  L    P  +   + +M+  Y+      HH  A +
Sbjct: 37  PKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYT---SCNHHSRAWN 93

Query: 85  LFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF-GSDCYIMNAL 143
           +F  MLR    GV  P+ FT   VLK C  LK    GK +HG   K+G  GS  Y+ NAL
Sbjct: 94  VFTNMLR---DGVK-PNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNAL 149

Query: 144 IHMYSVFGD-LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
           + MY+   D +  AR +F+ +  ++ VSWT+LI G          + +F +M     E++
Sbjct: 150 MDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELS 209

Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
             +    + ACA  G+ ++G++VH  V      E    V  A++DMY +  C   A    
Sbjct: 210 PFSFSIAVSACASIGSSNLGKQVHAAVINHG-FESNLPVMNAILDMYCRCRCASEAKQLF 268

Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
                     W  +I+G  +     E++ +F +M +    P+  T T+V++AC N  ++ 
Sbjct: 269 GEMTQKDTITWNTLIAGFETLD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILY 327

Query: 323 EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
               +   +  R G++  ++    ++D+ A+ G + ++    + M    + V W +++  
Sbjct: 328 CGQQLHGGIIHR-GLDNNLELSNALIDMYAKCGNVADSHKIFSGM-RHTNLVSWTSMMIG 385

Query: 383 CKVHEDTERAERLMKQHLEMGV 404
              H   + A  L  + +  G+
Sbjct: 386 YGAHGHGKEAVDLFNEMVGSGI 407


>Medtr3g072900.1 | PPR containing plant-like protein | HC |
           chr3:32815251-32818532 | 20130731
          Length = 745

 Score =  239 bits (610), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 211/375 (56%), Gaps = 8/375 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N+ML  + ++ D   +  ALS+   M R    GV   D +TF  VLK C          
Sbjct: 310 WNSMLSGHVVNGD---YVEALSMISHMHRS---GVRF-DFYTFSIVLKICMNFDNLSLAS 362

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           Q+HGF+   G+  DC + + LI +Y+  G +  A  LF+R+PD+DVV+W+SLI G     
Sbjct: 363 QVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFG 422

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
               A  LF  M+  G++++   +  VL+AC+   +   G++VH +   KK  E +  V+
Sbjct: 423 SDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCL-KKGYESEGVVT 481

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           TALIDMYAK G IE A              WT++I G A +G  +EAI L  +M     K
Sbjct: 482 TALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTK 541

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           P++ T+  VL+ACR++ LV EA+ VF+ ++  +G+ P  +H+ C+VD+L +AG  +EA  
Sbjct: 542 PNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVK 601

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGK 422
            ++ MP KPD  +W +L+ AC  +++ + A  + +  L    +D   YI+ SNVYA++G 
Sbjct: 602 LISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGM 661

Query: 423 WSNKAEVRELMNKKG 437
           W + ++VRE + K G
Sbjct: 662 WDSVSKVRETVKKIG 676



 Score =  136 bits (342), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 152/319 (47%), Gaps = 10/319 (3%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D FTFP VLK C        G+++H +I K GF S CY ++ALI MYS    L  A ++F
Sbjct: 235 DEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIF 294

Query: 161 DRMPDRDVVS-----WTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           D+      VS     W S++ G V +   VEA+ +   M  +GV  +  T   VL+ C +
Sbjct: 295 DQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMN 354

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
              LS+  +VHG V      E  C V + LID+YAK G I +A              W++
Sbjct: 355 FDNLSLASQVHGFVITSGY-ELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSS 413

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS-DMKKR 334
           +I+G A  G  K A  LF++M    ++ D   ++ VL AC +    +    V S  +KK 
Sbjct: 414 LITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKG 473

Query: 335 YGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAER 394
           Y  E  +     ++D+ A+ G +++A      +  + D + W ++I  C  +   E A  
Sbjct: 474 YESEGVVT--TALIDMYAKCGDIEDALSLFGCLS-EIDTMSWTSIIVGCAQNGRAEEAIS 530

Query: 395 LMKQHLEMGVDDSGSYILA 413
           L+ + +E G   +   IL 
Sbjct: 531 LLHKMIESGTKPNKITILG 549



 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 196/470 (41%), Gaps = 51/470 (10%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           ++  A  LH+ I+K G  N+    N + +  ++  S   D   AR +    P  N   + 
Sbjct: 18  SIKNAKSLHSHIIKSGFCNHIFILN-NMISVYSKCSSIID---ARNMFDEMPHRNIVSWT 73

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
           TM+   + SS P     ALSL+  M+      +  P+ F +  VLK C  ++    GK +
Sbjct: 74  TMVSVLTNSSMP---HEALSLYNEMIESK---IEQPNQFLYSAVLKACGLVRNVELGKMV 127

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDL-----------------------GVARE--- 158
           H  I +     D  +MNAL+ MY   G L                       G A++   
Sbjct: 128 HYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLI 187

Query: 159 -----LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
                LFD+MP+ D+VSW S+I GLVD +    A+     M   G+++++ T  SVL+AC
Sbjct: 188 DDAMKLFDKMPEPDIVSWNSIIAGLVD-NASSRALRFVSMMHGKGLKMDEFTFPSVLKAC 246

Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX-----XXXXXX 268
             S  L +GR++H  +  K   E  C   +ALIDMY+    +  A               
Sbjct: 247 GCSDELMLGREIHCYII-KSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSE 305

Query: 269 XXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
               W +M+SG   +G   EA+ +   M    V+ D  T + VL  C N D +  A  V 
Sbjct: 306 SLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVH 365

Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
             +    G E        ++D+ A+ G +  A      +P K D V W +LI  C     
Sbjct: 366 GFVITS-GYELDCVVGSILIDIYAKQGSINNALRLFERLPDK-DVVAWSSLITGCARFGS 423

Query: 389 TERAERLMKQHLEMGVD-DSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
            + A  L    + +G+  D     +     +S+    +  +V  L  KKG
Sbjct: 424 DKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKG 473



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 143/333 (42%), Gaps = 47/333 (14%)

Query: 112 CARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSW 171
           C R +  +  K LH  I K GF +  +I+N +I +YS    +  AR +FD MP R++VSW
Sbjct: 13  CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72

Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEV-NDATVVSVLRACADSGALSMGRKVHGIVK 230
           T+++  L +   P EA+ L+  M+E+ +E  N     +VL+AC     + +G+ VH  + 
Sbjct: 73  TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIF 132

Query: 231 EKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI 290
           + K ++    +  AL+DMY K G +  A              W  +I G A  GL  +A+
Sbjct: 133 QAK-LDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAM 191

Query: 291 DLFLEMETCNV------------------------------KPDERTMTAVLSACRNAD- 319
            LF +M   ++                              K DE T  +VL AC  +D 
Sbjct: 192 KLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDE 251

Query: 320 --LVRE--AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA----EDFMNAMPMKP 371
             L RE   Y++      + G E +      ++D+ +    L EA    + +     +  
Sbjct: 252 LMLGREIHCYII------KSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSE 305

Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
              LW +++    V+ D   A  ++      GV
Sbjct: 306 SLALWNSMLSGHVVNGDYVEALSMISHMHRSGV 338


>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
           | HC | chr1:38304139-38306748 | 20130731
          Length = 739

 Score =  239 bits (609), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 130/379 (34%), Positives = 206/379 (54%), Gaps = 2/379 (0%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           VL    +LKL +QGK++H F+ K G  +D  + +AL+ MY+  G +  A  +F  M D D
Sbjct: 345 VLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMD 404

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
           ++ W SLI G         A   F  +  A    N  T+VSVL  C   GAL  G+++H 
Sbjct: 405 IMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQGKEIH- 463

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
               +  +    +V  +LIDMY+K G +E                +  MIS   +HGL +
Sbjct: 464 CYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMISACGAHGLGE 523

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
           + +  + +M    +KP++ T  ++LSAC +A LV   +++++ M   YGI+P ++H+ C+
Sbjct: 524 KGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSMVNDYGIKPDMEHYSCM 583

Query: 348 VDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL-EMGVDD 406
           VDL+ R G L  A  F+  MP+ PDA +  +L+ AC++H   E A++L  +H+ ++  +D
Sbjct: 584 VDLIGRTGDLDGAYKFITTMPVTPDANVLGSLLGACRLHNKVELADQLTAEHIFQLNTED 643

Query: 407 SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEA 466
           SG Y+L SN+YAS  +W + ++VR L+  KGL K PGSS I+V  ++  F      +PE 
Sbjct: 644 SGHYVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWIQVGHSIFVFHATSIFYPEL 703

Query: 467 DNIFVKLDEMVDKLKKEGY 485
             I   LD +   +K E Y
Sbjct: 704 AKIEETLDSLFLVMKNEDY 722



 Score =  136 bits (343), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 186/384 (48%), Gaps = 13/384 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           +LHA +L  G  +  +P          A    G  +YA L  +  P  ++  +N +LRA 
Sbjct: 52  KLHALLLIHGFFHPSSPHTPLCSHLVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRAL 111

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
             S++ T    ++  +  MLR   HG  APDN+T+P VLK C+ L+    G+ ++  I  
Sbjct: 112 IGSNNFTL---SIQFYHSMLR---HGF-APDNYTYPLVLKACSSLQAIEIGRWVYHNILI 164

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
               ++ ++  ALI M+     L  AR++FD M  RD+ +WT+LI G V +    EA+ L
Sbjct: 165 NEEKANLFVQCALIDMFVKCESLEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLL 224

Query: 191 FGRMLEAGVEVNDATVVSVLRACAD-SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
           F +M   G++ +   V SVL  C      L +G  +HG    +   +    VS A+IDMY
Sbjct: 225 FRKMRLEGLKADSVIVASVLPVCGRLMEGLKLGMAMHGCAL-RSGFDSDLYVSNAIIDMY 283

Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
            K G  + A              W+ +I+G + +G+ KE+ +L++ M    +  +E  ++
Sbjct: 284 CKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVS 343

Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED-FMNAMP 368
            VL A     L ++   + + + K+ G+   +     +VD+ A  G +KEAE  F N + 
Sbjct: 344 TVLPALGKLKLFKQGKEMHNFVLKQ-GLLTDVVVGSALVDMYANCGSIKEAESIFRNMLD 402

Query: 369 MKPDAVLWRTLIWACKVHEDTERA 392
           M  D ++W +LI    +  D + A
Sbjct: 403 M--DIMVWNSLIAGYNLVGDFQSA 424



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 100/196 (51%), Gaps = 7/196 (3%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N+++  Y+L  D    F       F  R        P++ T   VL  C ++   RQGK
Sbjct: 408 WNSLIAGYNLVGDFQSAF-------FTFREIWVAEHRPNHITLVSVLPICTQIGALRQGK 460

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H + T+ G G +  + N+LI MYS  G L +  ++F++M  ++ +++ ++I     H 
Sbjct: 461 EIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMISACGAHG 520

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              + ++ + +M EAG++ N  T +S+L AC+ +G +  G  ++  +     I+      
Sbjct: 521 LGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSMVNDYGIKPDMEHY 580

Query: 243 TALIDMYAKSGCIESA 258
           + ++D+  ++G ++ A
Sbjct: 581 SCMVDLIGRTGDLDGA 596


>Medtr6g059820.1 | PPR containing plant-like protein | HC |
           chr6:20520961-20518530 | 20130731
          Length = 528

 Score =  239 bits (609), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 165/519 (31%), Positives = 245/519 (47%), Gaps = 60/519 (11%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           ++  +++  QL + +  LG S         KL  F +L+ S +L+YA  +     + N Y
Sbjct: 15  KINHLNQLKQLQSHLTTLGHSQTHFYA--FKLIRFCSLNLS-NLHYAHQIFNHIHSPNIY 71

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            +  ++ A+S     T       LF  ML         P+NF +P VLK      L    
Sbjct: 72  LFTAIITAFSSQQHTT-----FKLFKTMLNSNIR----PNNFIYPHVLKSVKERFLV--- 119

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYS-VFGDLGVARELFDRMPDRDVVSWTSLIDG--- 177
             +H  I K GF +   +  +L+  YS V G L  A ++FD M +R++V +T L+ G   
Sbjct: 120 DLVHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLR 179

Query: 178 -------------LVDHDRPV---------------EAIELFGRMLEA----------GV 199
                        +VD D P                E I LF  M+ A          G 
Sbjct: 180 VGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGN 239

Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
           + N  TVV VL AC   G L +G+ +HG V     +     VS AL+DMY K G +E A 
Sbjct: 240 KPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFV-VDSFVSNALVDMYGKCGSLELAR 298

Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN--VKPDERTMTAVLSACRN 317
                        W +MI+  A HG C++AI  F +M  C   V+PDE T   +L+AC +
Sbjct: 299 KVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTH 358

Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
             LV +    F  M K YGIEP I H+GC++DLL RAG   EA D +  M M+PD V+W 
Sbjct: 359 GGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWG 418

Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKG 437
           +L+  CKVH  T+ AE   K+ +E+   + G   + +N+Y  +GKW     V   + ++ 
Sbjct: 419 SLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQK 478

Query: 438 LIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM 476
             K PG S IEVD  +H+F   D ++P+ + ++  L+ +
Sbjct: 479 SYKIPGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESL 517


>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:1959596-1956593 | 20130731
          Length = 831

 Score =  237 bits (605), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 225/424 (53%), Gaps = 12/424 (2%)

Query: 27  PRNFSKLFTFAALSPSGDLNYARLLL--TSNPALNSYYYNTMLRAYSLSSDPTHHFHALS 84
           P + + +    A   SGD+   R +    S+P+L S+  N +L  Y+ S+D   H  A+ 
Sbjct: 350 PDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISW--NAILSGYNQSAD---HGEAVE 404

Query: 85  LFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALI 144
           LF    R+       PD  T   +L  CA L L   GKQ+H    K+GF  D Y+ ++LI
Sbjct: 405 LF----RKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLI 460

Query: 145 HMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDA 204
           ++YS  G + V++ +F ++ + DVV W S+I G   +    +A+  F RM + G   ++ 
Sbjct: 461 NVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEF 520

Query: 205 TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
           +  ++  +CA   +L  G+++H  + +   ++    V ++L++MY K G + +A      
Sbjct: 521 SFATIASSCAKLSSLFQGQQIHAQIIKDGYVD-NVFVGSSLVEMYCKCGDVGAARYYFDM 579

Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREA 324
                   W  MI G A +G   EA+ L+ +M +   KPD+ T  AVL+AC ++ LV E 
Sbjct: 580 MPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEG 639

Query: 325 YMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACK 384
             +FS M +++ + P + H+ C++D L R G   E E  ++ MP K D ++W  ++ +C+
Sbjct: 640 VEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCR 699

Query: 385 VHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGS 444
           VH +   A+R  ++   +   +S  Y+L +N+Y+S+G+W +   VR+LM+   + K PG 
Sbjct: 700 VHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGY 759

Query: 445 SRIE 448
           SR E
Sbjct: 760 SRSE 763



 Score =  126 bits (317), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 187/410 (45%), Gaps = 30/410 (7%)

Query: 30  FSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFM 89
           FS     +A   S +L YA  L    P  N+   NT++     +    +   AL  +  M
Sbjct: 72  FSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNG---YERQALDTYDLM 128

Query: 90  LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV 149
           +    +    P + TF  V   C  LK    G++ HG + K+GF S+ Y+ NAL+ MY+ 
Sbjct: 129 M---VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTK 185

Query: 150 FGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSV 209
            G    A  +F+ + + + V++T+++ GL   ++  E +ELF  ML  G+ V+  ++ ++
Sbjct: 186 CGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTI 245

Query: 210 LRACA---------DSGALS---MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
           L  CA         DS  LS    G+++H +   K   E   ++  +L+DMYAK+G ++S
Sbjct: 246 LVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAV-KHGFERDLHLCNSLLDMYAKTGDMDS 304

Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
           A              W  MISG  +    ++A++ F  M+ C  +PD+ T   +L+AC  
Sbjct: 305 AENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVK 364

Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK---PDAV 374
           +  V+    +F  M       P++  +  ++    ++    EA +    M  +   PD  
Sbjct: 365 SGDVKVGRQIFDCMS-----SPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRT 419

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILAS--NVYASVGK 422
               ++ +C      E  +++     ++G  D   Y+ +S  NVY+  GK
Sbjct: 420 TLAIILSSCAELGLLEAGKQVHAVSQKLGFYDD-VYVASSLINVYSKCGK 468


>Medtr7g082690.1 | PPR containing plant-like protein | HC |
           chr7:31706993-31708834 | 20130731
          Length = 503

 Score =  236 bits (601), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 221/442 (50%), Gaps = 13/442 (2%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           +++A Q+++ +++ G   N    N        AL  +G L  A  +  ++P  ++  +NT
Sbjct: 75  VTQAYQIYSLVVRSGLECNVFLLNA----FLTALVRNGKLTEALQIFETSPIRDTVTWNT 130

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           M+  Y         F +  + +F       GV  PD FTF   L   A +   + G Q+H
Sbjct: 131 MMGGY-------LEFSSEQIPVFWRYMNREGVK-PDEFTFASALTGLATISSLKMGMQVH 182

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
             + + G+G D  + N+L+ MY     L    + FD +P +DV SWT + DG +    P 
Sbjct: 183 AQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPR 242

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
            A+ +  +M + GV+ N  T+ + L ACA   ++  G++ HG+ + K   +    V  AL
Sbjct: 243 MALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGL-RIKLGSDVDVCVDNAL 301

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           +DMYAK GC++SA              WT MI   A +G   EA+ +F EM+  +V+P+ 
Sbjct: 302 LDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNY 361

Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
            T   VL AC     V E +   S M K YGI P   H+ C+V +L RAG +KEA++ + 
Sbjct: 362 ITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELIL 421

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
            MP  P   +W+TL+ AC++H D E  +   +  ++   +D  SY+L SN+ A    W  
Sbjct: 422 RMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDC 481

Query: 426 KAEVRELMNKKGLIKPPGSSRI 447
              +RELM  + + K PGSS I
Sbjct: 482 VVSLRELMETRNVKKVPGSSWI 503



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 159/363 (43%), Gaps = 12/363 (3%)

Query: 44  DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
           DL  A  L    P  N   +++++     +   +    ALSLF  M R    G   P+ F
Sbjct: 7   DLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASD---ALSLFSCMHRE---GFVKPNEF 60

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           TF   L+ C+  +   Q  Q++  + + G   + +++NA +      G L  A ++F+  
Sbjct: 61  TFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETS 120

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGR-MLEAGVEVNDATVVSVLRACADSGALSMG 222
           P RD V+W +++ G ++     E I +F R M   GV+ ++ T  S L   A   +L MG
Sbjct: 121 PIRDTVTWNTMMGGYLEFSS--EQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMG 178

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            +VH  +      +  C V  +L+DMY K+  +E                WT M  G   
Sbjct: 179 MQVHAQLVRSGYGDDIC-VGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQ 237

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
            G  + A+ +  +M+   VKP++ T+   L+AC     + E    F  ++ + G +  + 
Sbjct: 238 WGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQ-FHGLRIKLGSDVDVC 296

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEM 402
               ++D+ A+ GC+  A     +   +   V W T+I AC  +     A ++  +  E 
Sbjct: 297 VDNALLDMYAKCGCMDSAWTVFRSTNSR-SVVSWTTMIMACAQNGQPGEALQIFDEMKET 355

Query: 403 GVD 405
            V+
Sbjct: 356 SVE 358



 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 9/262 (3%)

Query: 146 MYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG-VEVNDA 204
           MY    DL  A +LFD MP+R+VVSW+S++ G V +    +A+ LF  M   G V+ N+ 
Sbjct: 1   MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60

Query: 205 TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
           T VS L+AC+ S  ++   +++ +V  +  +EC   +  A +    ++G +  A      
Sbjct: 61  TFVSALQACSLSENVTQAYQIYSLVV-RSGLECNVFLLNAFLTALVRNGKLTEALQIFET 119

Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLE-METCNVKPDERTMTAVLSACRNADLVRE 323
                   W  M+ G        E I +F   M    VKPDE T  + L+       ++ 
Sbjct: 120 SPIRDTVTWNTMMGGYLE--FSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKM 177

Query: 324 AYMVFSDM-KKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
              V + + +  YG +  + +   +VD+  +   L+E     + +P K D   W  +   
Sbjct: 178 GMQVHAQLVRSGYGDDICVGN--SLVDMYLKNQKLEEGFKAFDEIPHK-DVCSWTQMADG 234

Query: 383 CKVHEDTERAERLMKQHLEMGV 404
           C    +   A  ++ +  +MGV
Sbjct: 235 CLQWGEPRMALAVIAKMKKMGV 256


>Medtr4g011730.1 | PPR containing plant-like protein | HC |
           chr4:2939745-2937455 | 20130731
          Length = 706

 Score =  234 bits (597), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/437 (32%), Positives = 223/437 (51%), Gaps = 51/437 (11%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY-------------------- 147
           VL  CA +   ++GK++HGF+ K G+    ++ NALI +Y                    
Sbjct: 268 VLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNK 327

Query: 148 ---------SVFGDLGV---ARELFDRM-------PDR-DVVSWTSLIDGLVDHDRPVEA 187
                    S + D G+   A E+F ++       P R +V+SW+++I G     R  ++
Sbjct: 328 SLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKS 387

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           +ELF +M  A V  N  T+ SVL  CA+  AL++GR++H     +  ++    V   L++
Sbjct: 388 LELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHAYAI-RNLMDDNILVGNGLVN 446

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY K G  E A              W ++I G   HGL + A+  F EM    ++PD+ T
Sbjct: 447 MYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKIT 506

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
             AVLSAC +A LV     +F  M   + IEPT++H+ C+VDLL RAG L+EA D +  M
Sbjct: 507 FVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYACMVDLLGRAGLLQEAHDIVRNM 566

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
           P++P+  +W  L+ +C+++ DT+  E +  + L +  + +GS++L SN+YA  GK  + A
Sbjct: 567 PIEPNECVWGALLNSCRMYRDTDLIEEIESRILALKSEITGSFMLLSNIYADSGKREDSA 626

Query: 428 EVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM----------V 477
            VR    +KG  K PG S IEV   ++ F  G+  H E D IF  L+E+          +
Sbjct: 627 RVRVSAKEKGFKKIPGQSWIEVRKKVYTFSAGNVVHLEQDEIFAILNELALQMASVHYSI 686

Query: 478 DKLKKEGYNPKLSEVLL 494
           +    + YN   SE+LL
Sbjct: 687 NSCFHQPYNLDESELLL 703



 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 202/484 (41%), Gaps = 105/484 (21%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNP--ALNSYY 62
           T+ +A Q+H Q++   T ++    +F      A  S    ++ AR + T+ P  +L++  
Sbjct: 38  TLQQARQIHTQLILTTTHHS----SFLSARLIATYSRFNSISEARKIFTTTPFESLSNLV 93

Query: 63  YNTMLRA---YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
           +N+++RA   +   +     +H +  F F+          PD FT P ++K C+++    
Sbjct: 94  WNSIIRANVSHGYYNYAVKIYHQMMKFGFL----------PDGFTLPLIIKSCSKIGSVG 143

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG-- 177
             K +H  + + GF +  +++N L+ MY     +  A ++FD M  R V+SW +L+ G  
Sbjct: 144 LCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYA 203

Query: 178 ------------------------------LVDHDRPV---EAIELFGRMLEAGVEVNDA 204
                                         L  H R     E +ELF  M   G+E++  
Sbjct: 204 FNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGE 263

Query: 205 TVVSVLRACADSGALSMGRKVHGIVKE------------------KKR------------ 234
            V  VL  CAD   +  G+++HG V +                  KKR            
Sbjct: 264 AVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSD 323

Query: 235 IECKCNVS-TALIDMYAKSGCIESAXXXXXXXXXX--------XXXXWTAMISGLASHGL 285
           I+ K  VS  ALI  YA SG  + A                      W+A+ISG AS G 
Sbjct: 324 IKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGR 383

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSACRN---ADLVRE--AYMVFSDMKKRYGIEPT 340
            +++++LF +M+   V  +  T+++VLS C      +L RE  AY +      R  ++  
Sbjct: 384 LEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHAYAI------RNLMDDN 437

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
           I     +V++  + G  +EA    + +  + D + W +LI    +H   E A R   + +
Sbjct: 438 ILVGNGLVNMYMKCGVFEEAHLVFDNIKGR-DLISWNSLIGGYGMHGLGENAVRTFDEMI 496

Query: 401 EMGV 404
             G+
Sbjct: 497 NAGL 500



 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 76/155 (49%)

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           T   VL  CA L     G++LH +  +     +  + N L++MY   G    A  +FD +
Sbjct: 405 TISSVLSVCAELAALNLGRELHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNI 464

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
             RD++SW SLI G   H     A+  F  M+ AG+  +  T V+VL AC+ +G ++ GR
Sbjct: 465 KGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAGR 524

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
            +   +  +  IE        ++D+  ++G ++ A
Sbjct: 525 NLFDRMVTEFSIEPTVEHYACMVDLLGRAGLLQEA 559


>Medtr1g014340.1 | PPR containing plant-like protein | HC |
           chr1:3000992-3003085 | 20130731
          Length = 697

 Score =  233 bits (595), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/442 (32%), Positives = 219/442 (49%), Gaps = 9/442 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G L  A  +    P      +N+M+  Y    D       +S      R  + GV     
Sbjct: 256 GQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGD------GISCIQLFKRMYSEGVKPTLT 309

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
                ++ C    +L  +GK +HG+I +     D ++ ++L+ +Y   G +  A  +F  
Sbjct: 310 TLTSTLMACSQSAQLL-EGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKL 368

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           MP    VSW  +I G V   +  +A+ LFG M ++ VE +  T  SVL AC+   AL  G
Sbjct: 369 MPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKG 428

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
           R++H ++ E+     +  V  AL+DMYAK G +E A              WT+MI+   S
Sbjct: 429 REIHNLIVERNLGNNEV-VMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGS 487

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           HG   EA++LF EM   NVKPD  T  A+LSAC +A LV +    F+ M   YGI P I+
Sbjct: 488 HGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIE 547

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMP-MKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
           H+ C++ LL RAG L EA + + + P +  D  L  TL  AC++H++ +    + +  ++
Sbjct: 548 HYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLID 607

Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDY 461
              DDS +YI+ SN+YAS GKW     VR  M   GL K PG S IE++  +  F + D 
Sbjct: 608 KDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDN 667

Query: 462 NHPEADNIFVKLDEMVDKLKKE 483
           +H   + I   L  +   ++ E
Sbjct: 668 SHYHLEGIGNILSYLTSHMEDE 689



 Score =  148 bits (374), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 169/343 (49%), Gaps = 12/343 (3%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +NT++  Y  S      F     +  M+RR       PD+ T    +  CARL    +G+
Sbjct: 175 WNTVISCYYQSG----KFEEALRYFGMMRRFGF---EPDSVTITTAISSCARLLDLDRGR 227

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H  +   GF  D ++  AL+ MY   G L +A E+F++MP++ VV+W S+I+G     
Sbjct: 228 EIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKG 287

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
             +  I+LF RM   GV+    T+ S L AC+ S  L  G+ VHG +  + RI+    ++
Sbjct: 288 DGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYII-RNRIQPDIFLN 346

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           ++L+D+Y K G +ESA              W  MISG  + G   +A+ LF EM    V+
Sbjct: 347 SSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVE 406

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKR-YGIEPTIQHFGCVVDLLARAGCLKEAE 361
           PD  T T+VL+AC     + +   + + + +R  G    +   G ++D+ A+ G ++EA 
Sbjct: 407 PDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVV--MGALLDMYAKCGAVEEAF 464

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
                +P + D V W ++I A   H     A  L  + L+  V
Sbjct: 465 GVFKCLPER-DLVSWTSMITAYGSHGRVYEALELFAEMLQSNV 506



 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 174/380 (45%), Gaps = 20/380 (5%)

Query: 5   TMSEALQLHAQILKLGTSNN-DAPRNFSKLFTFAALSPSGDLNYARLL--LTSNPALNSY 61
           ++ +   LH +++ LG  N+    +N   L+    L      +YA+ +  +  NP     
Sbjct: 18  SLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNL-----FDYAKNVFDVIENP-FEIS 71

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
             N ++  Y+ +     +  AL LF  ++  P      PD++T+P VLK C  L+    G
Sbjct: 72  LCNGLMAGYTRN---CMYDEALGLFDKLMCYPCL---KPDSYTYPSVLKACGGLRRVVLG 125

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           + +H  + K G   D  + ++L+ MY+   +   A +LFD MPD+DV  W ++I      
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCN 240
            +  EA+  FG M   G E +  T+ + + +CA    L  GR++H  +V    R++    
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSF-- 243

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           VS AL+DMY K G +E A              W +MI+G    G     I LF  M +  
Sbjct: 244 VSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG 303

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
           VKP   T+T+ L AC  +  + E   V   +  R  I+P I     ++DL  + G ++ A
Sbjct: 304 VKPTLTTLTSTLMACSQSAQLLEGKFVHGYI-IRNRIQPDIFLNSSLMDLYFKCGKVESA 362

Query: 361 EDFMNAMPMKPDAVLWRTLI 380
           E     MP K   V W  +I
Sbjct: 363 ETIFKLMP-KTTTVSWNVMI 381



 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 9/301 (2%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           +L+     K  +QGK LH  +  +G  +D Y+   LI +Y        A+ +FD + +  
Sbjct: 9   LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68

Query: 168 VVSW-TSLIDGLVDHDRPVEAIELFGR-MLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
            +S    L+ G   +    EA+ LF + M    ++ +  T  SVL+AC     + +G+ +
Sbjct: 69  EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128

Query: 226 HG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
           H  +VKE   ++    V ++L+ MYAK    E A              W  +IS     G
Sbjct: 129 HTCLVKEGLMVDIV--VGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSG 186

Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGIEPTIQH 343
             +EA+  F  M     +PD  T+T  +S+C R  DL R   +    +   + ++  +  
Sbjct: 187 KFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVS- 245

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
              +VD+  + G L+ A +    MP K   V W ++I       D     +L K+    G
Sbjct: 246 -AALVDMYGKCGQLEMAIEVFEQMPNKT-VVAWNSMINGYGFKGDGISCIQLFKRMYSEG 303

Query: 404 V 404
           V
Sbjct: 304 V 304


>Medtr1g014340.2 | PPR containing plant-like protein | HC |
           chr1:3000992-3003085 | 20130731
          Length = 697

 Score =  233 bits (595), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/442 (32%), Positives = 219/442 (49%), Gaps = 9/442 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G L  A  +    P      +N+M+  Y    D       +S      R  + GV     
Sbjct: 256 GQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGD------GISCIQLFKRMYSEGVKPTLT 309

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
                ++ C    +L  +GK +HG+I +     D ++ ++L+ +Y   G +  A  +F  
Sbjct: 310 TLTSTLMACSQSAQLL-EGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKL 368

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           MP    VSW  +I G V   +  +A+ LFG M ++ VE +  T  SVL AC+   AL  G
Sbjct: 369 MPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKG 428

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
           R++H ++ E+     +  V  AL+DMYAK G +E A              WT+MI+   S
Sbjct: 429 REIHNLIVERNLGNNEV-VMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGS 487

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           HG   EA++LF EM   NVKPD  T  A+LSAC +A LV +    F+ M   YGI P I+
Sbjct: 488 HGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIE 547

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMP-MKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
           H+ C++ LL RAG L EA + + + P +  D  L  TL  AC++H++ +    + +  ++
Sbjct: 548 HYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLID 607

Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDY 461
              DDS +YI+ SN+YAS GKW     VR  M   GL K PG S IE++  +  F + D 
Sbjct: 608 KDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDN 667

Query: 462 NHPEADNIFVKLDEMVDKLKKE 483
           +H   + I   L  +   ++ E
Sbjct: 668 SHYHLEGIGNILSYLTSHMEDE 689



 Score =  148 bits (374), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 169/343 (49%), Gaps = 12/343 (3%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +NT++  Y  S      F     +  M+RR       PD+ T    +  CARL    +G+
Sbjct: 175 WNTVISCYYQSG----KFEEALRYFGMMRRFGF---EPDSVTITTAISSCARLLDLDRGR 227

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H  +   GF  D ++  AL+ MY   G L +A E+F++MP++ VV+W S+I+G     
Sbjct: 228 EIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKG 287

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
             +  I+LF RM   GV+    T+ S L AC+ S  L  G+ VHG +  + RI+    ++
Sbjct: 288 DGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYII-RNRIQPDIFLN 346

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           ++L+D+Y K G +ESA              W  MISG  + G   +A+ LF EM    V+
Sbjct: 347 SSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVE 406

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKR-YGIEPTIQHFGCVVDLLARAGCLKEAE 361
           PD  T T+VL+AC     + +   + + + +R  G    +   G ++D+ A+ G ++EA 
Sbjct: 407 PDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVV--MGALLDMYAKCGAVEEAF 464

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
                +P + D V W ++I A   H     A  L  + L+  V
Sbjct: 465 GVFKCLPER-DLVSWTSMITAYGSHGRVYEALELFAEMLQSNV 506



 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 174/380 (45%), Gaps = 20/380 (5%)

Query: 5   TMSEALQLHAQILKLGTSNN-DAPRNFSKLFTFAALSPSGDLNYARLL--LTSNPALNSY 61
           ++ +   LH +++ LG  N+    +N   L+    L      +YA+ +  +  NP     
Sbjct: 18  SLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNL-----FDYAKNVFDVIENP-FEIS 71

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
             N ++  Y+ +     +  AL LF  ++  P      PD++T+P VLK C  L+    G
Sbjct: 72  LCNGLMAGYTRN---CMYDEALGLFDKLMCYPCL---KPDSYTYPSVLKACGGLRRVVLG 125

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           + +H  + K G   D  + ++L+ MY+   +   A +LFD MPD+DV  W ++I      
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCN 240
            +  EA+  FG M   G E +  T+ + + +CA    L  GR++H  +V    R++    
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSF-- 243

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           VS AL+DMY K G +E A              W +MI+G    G     I LF  M +  
Sbjct: 244 VSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG 303

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
           VKP   T+T+ L AC  +  + E   V   +  R  I+P I     ++DL  + G ++ A
Sbjct: 304 VKPTLTTLTSTLMACSQSAQLLEGKFVHGYI-IRNRIQPDIFLNSSLMDLYFKCGKVESA 362

Query: 361 EDFMNAMPMKPDAVLWRTLI 380
           E     MP K   V W  +I
Sbjct: 363 ETIFKLMP-KTTTVSWNVMI 381



 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 9/301 (2%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           +L+     K  +QGK LH  +  +G  +D Y+   LI +Y        A+ +FD + +  
Sbjct: 9   LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68

Query: 168 VVSW-TSLIDGLVDHDRPVEAIELFGR-MLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
            +S    L+ G   +    EA+ LF + M    ++ +  T  SVL+AC     + +G+ +
Sbjct: 69  EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128

Query: 226 HG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG 284
           H  +VKE   ++    V ++L+ MYAK    E A              W  +IS     G
Sbjct: 129 HTCLVKEGLMVDIV--VGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSG 186

Query: 285 LCKEAIDLFLEMETCNVKPDERTMTAVLSAC-RNADLVREAYMVFSDMKKRYGIEPTIQH 343
             +EA+  F  M     +PD  T+T  +S+C R  DL R   +    +   + ++  +  
Sbjct: 187 KFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVS- 245

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
              +VD+  + G L+ A +    MP K   V W ++I       D     +L K+    G
Sbjct: 246 -AALVDMYGKCGQLEMAIEVFEQMPNKT-VVAWNSMINGYGFKGDGISCIQLFKRMYSEG 303

Query: 404 V 404
           V
Sbjct: 304 V 304


>Medtr4g074470.1 | PPR containing plant-like protein | HC |
           chr4:28370337-28367680 | 20130731
          Length = 542

 Score =  233 bits (594), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 169/532 (31%), Positives = 253/532 (47%), Gaps = 95/532 (17%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPAL--N 59
           +++++SE  QL A I K G  ++  P   +KL  F+ALSP G+L++A  L   +  L  N
Sbjct: 15  KLSSISELKQLQAIITKSGL-HSHIPLT-TKLIFFSALSPFGNLSHAYSLFQHSSILIHN 72

Query: 60  SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCAR----- 114
            +  NTM+RA+S S  P     AL ++  ML          D++T  FVLK C+R     
Sbjct: 73  PFISNTMIRAFSHSCFP---LQALLIYNQMLINNV----VSDSYTCNFVLKACSRAYKLI 125

Query: 115 -----------LKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR- 162
                      + +  +G ++H  + K+GF +D  + N+L++ YS  G + VAR LFD+ 
Sbjct: 126 QESGSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQI 185

Query: 163 ------------------------------MPDRDVVSWTSLIDGLVDHDRPVEAIELFG 192
                                         MP + VVSW +LI   +       A  +FG
Sbjct: 186 KDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFG 245

Query: 193 RMLE-------------------------------AGVEVNDATVVSVLRACADSGALSM 221
            M E                               AGV+  + T++S+L ACA++GAL +
Sbjct: 246 CMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEI 305

Query: 222 GRKVHGIVKE-KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
           G K++  +K  + +IE    +  AL++MY K G +  A              W AM+ GL
Sbjct: 306 GHKIYESLKVCEHKIESY--LGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGL 363

Query: 281 ASHGLCKEAIDLFLEMETC---NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           A HG C+E   LF EME     +++PD  T   VL AC +  LV +A   F  M KRY I
Sbjct: 364 AVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKI 423

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
            P  +H+GC+VDLL+R G L+EA   +   P +   VLWRTL+ AC+   +TE AE   K
Sbjct: 424 VPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFK 483

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
           Q  ++     G Y+L SN+YA  G+W     +R  M+   + +  G S+I +
Sbjct: 484 QLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 535


>Medtr7g113540.1 | PPR containing plant-like protein | HC |
           chr7:46789868-46787166 | 20130731
          Length = 650

 Score =  233 bits (593), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 226/439 (51%), Gaps = 4/439 (0%)

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N +     +S    + F+  SL +F   R   G  +P+  T+   L  C+ L++ R G++
Sbjct: 214 NVVTWTAVISGLAQNEFYEDSLRLFAQMRCC-GSVSPNVLTYLSSLMACSGLQVLRDGQK 272

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +HG + K+G  SD  I +AL+ +YS  G L  A ++F+   + D VS T ++     +  
Sbjct: 273 IHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGF 332

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             EAI++F +M+  G+EV+   V +VL        L++G+++H ++ +K   E    V  
Sbjct: 333 EEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCE-NPFVGN 391

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
            L++MY+K G +  +              W ++I+  A HG   +A+  + EM    V P
Sbjct: 392 GLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAP 451

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
            + T  ++L AC +A LV +   +   M   +GI P  +H+ CVVD+L RAG L EA+ F
Sbjct: 452 TDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKF 511

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKW 423
           +  +P     ++W+ L+ AC +H D+E  +    +           Y+L +N+Y+S G W
Sbjct: 512 IEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNW 571

Query: 424 SNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKE 483
             +A   + M + G+ K  G S IE++  ++ FV+GD  HPEAD IF  L  ++  LK E
Sbjct: 572 KERASSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKHLKDE 631

Query: 484 GYNPKLSEVL--LEIDDEE 500
           GY P    +L  LE D E+
Sbjct: 632 GYVPDKKFILFYLEQDKED 650



 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 182/402 (45%), Gaps = 17/402 (4%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSYYYNTML 67
           +HA+I+K   S +      + LF + +L    S  G+   A  +    P  ++  +NTM+
Sbjct: 56  IHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMI 115

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA---RQGKQL 124
             +  + D    F     F   +          D  T   +L  C  L+L       + +
Sbjct: 116 SGFLRNGDFDTSFK----FFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMI 171

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           HG +   GF  +  + NALI  Y         R++FD M +R+VV+WT++I GL  ++  
Sbjct: 172 HGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFY 231

Query: 185 VEAIELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
            +++ LF +M   G V  N  T +S L AC+    L  G+K+HG++  K  ++    + +
Sbjct: 232 EDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLL-WKLGMQSDLCIES 290

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           AL+D+Y+K G +++A               T ++   A +G  +EAI +F +M    ++ 
Sbjct: 291 ALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEV 350

Query: 304 DERTMTAVLSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           D   ++AVL        +     + S  +KK +   P + +   +V++ ++ G L ++  
Sbjct: 351 DANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGN--GLVNMYSKCGDLSDSLL 408

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
               M  K ++V W ++I A   H D  +A +  ++    GV
Sbjct: 409 VFYQMTQK-NSVSWNSVIAAFARHGDGFKALQFYEEMRVEGV 449


>Medtr3g096440.1 | PPR containing plant-like protein | HC |
           chr3:44085648-44087691 | 20130731
          Length = 580

 Score =  232 bits (592), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 153/513 (29%), Positives = 246/513 (47%), Gaps = 44/513 (8%)

Query: 24  NDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHAL 83
           N   R ++ L +F   S  G  N A  L    P  N   YN+++   +      H FH  
Sbjct: 74  NKTTRTWNTLLSF--YSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLT-----RHEFHKE 126

Query: 84  SLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNAL 143
           ++  F   +   G    D FT   ++  C+ L   +  +Q+HG  T +GF ++  + NAL
Sbjct: 127 AVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNAL 186

Query: 144 IHMYSVFGDLGVARELFDRMPDRDVVSWTS------------------------------ 173
           I  Y   G+   +  LF  M ++D VSWTS                              
Sbjct: 187 IDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWA 246

Query: 174 -LIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEK 232
            LI G V + R  EA+E+F +M++ GV     T VSVL ACA    +  G++VH  +   
Sbjct: 247 ALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRG 306

Query: 233 KRIECKCNVS--TALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLASHGLCKEA 289
           +  +   NV    AL+DMYAK G ++SA               W  +I+G A +G  +++
Sbjct: 307 RSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDS 366

Query: 290 IDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVD 349
           + +F  M   N++P+  T   VLSAC +A LV     +   M++RYG++P   H+  ++D
Sbjct: 367 LAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLID 426

Query: 350 LLARAGCLKEAEDFMNAMP--MKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
           LL R   L+EA   +  +P  +     +W  ++  C+VH + E A +  +    +  +++
Sbjct: 427 LLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENT 486

Query: 408 GSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEAD 467
           G Y++ SN+YA+ G+WS+   +R +M ++GL K P  SRIE+  + HEFV  D  HP+  
Sbjct: 487 GRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFHPQIG 546

Query: 468 NIFVKLDEMVDKLKKEGYNPKLS-EVLLEIDDE 499
            I     ++V  +   GY P +S   LL+ DD+
Sbjct: 547 EIREANSKLVQHMMDVGYQPCISYPSLLDEDDD 579


>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
           chr7:19429810-19428206 | 20130731
          Length = 534

 Score =  232 bits (592), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 203/369 (55%), Gaps = 3/369 (0%)

Query: 127 FITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVE 186
              +M  G +    NA+I  Y+  G++      F  +P +D++SWT+L+   + + R  E
Sbjct: 166 LFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGE 225

Query: 187 AIELFGRMLEAGVEVND-ATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
            ++LF  M+  G  V D   + +V+ ACA  GAL  G++VH  +           + ++L
Sbjct: 226 VVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEVHFYLMVSG-FGIDVYIGSSL 284

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           IDMYAK G +E +              W +MI GLA+HG  KEA+ +F EME   ++P+ 
Sbjct: 285 IDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNR 344

Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
            T  +VL+AC +A  ++E    F+ M + Y I P ++H+GC+VDLL++ G L++A + + 
Sbjct: 345 VTFVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIR 404

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
            M  +P++ +W  L+  CKVH + E A   ++  + +   +SG Y L  N+YA V +WS+
Sbjct: 405 GMRFEPNSFIWGALLNGCKVHRNLEIARVTVRNLMILEPSNSGHYSLLVNMYAEVNRWSD 464

Query: 426 KAEVRELMNKKGLIKP-PGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEG 484
            A++R  M   G+ K  PGSS IE++  +H F   D  HP    + + L E+ ++L+  G
Sbjct: 465 VAKIRTEMKDLGVEKRCPGSSWIEINKEIHVFAASDKCHPSYGQVHLLLVELDEQLRLAG 524

Query: 485 YNPKLSEVL 493
           + P++  VL
Sbjct: 525 FVPEMGSVL 533



 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 1/189 (0%)

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
           G   PD      V+  CA L     GK++H ++   GFG D YI ++LI MY+  G L  
Sbjct: 237 GKVVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLER 296

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           +  +F ++ ++++  W S+IDGL  H    EA+ +F  M   G+  N  T VSVL AC  
Sbjct: 297 SLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTH 356

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXX-XXXXWT 274
           +G +  GR+    + E   I  +      ++D+ +K G +E A               W 
Sbjct: 357 AGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWG 416

Query: 275 AMISGLASH 283
           A+++G   H
Sbjct: 417 ALLNGCKVH 425



 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/379 (21%), Positives = 145/379 (38%), Gaps = 52/379 (13%)

Query: 130 KMGFGSDCYIMNALI--HMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           K  F  DC++MN  I         ++  A   F ++   + + + +LI   V      +A
Sbjct: 3   KTNFNQDCFLMNQFITASSSFSSFNINFAISTFTQITKPNTLVYNALIKACVHSHSSNQA 62

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           +  +  ML + V  +  +  S+++AC        G+ +HG V  K   +    V T L++
Sbjct: 63  LLHYIHMLRSSVIPSSYSFSSLIKACTLLTDAVNGKTLHGHVW-KYGFDSHVFVQTTLVE 121

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
            Y+  G +  A              WT MIS    +   + A  LF+EM      P+ + 
Sbjct: 122 FYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEM------PEGKN 175

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
                +A  NA                            V+D  A+ G ++  E F   +
Sbjct: 176 -----TATWNA----------------------------VIDGYAKLGNIERVEFFFKEI 202

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG--VDDSGSYILASNVYASVGKWSN 425
           P K D + W TL+     ++      +L  + +  G  V D  +     +  A +G    
Sbjct: 203 PSK-DIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGF 261

Query: 426 KAEVR--ELMNKKGLIKPPGSSRIEVD---GALHEFVMGDYNHPEADNIFVKLDEMVDKL 480
             EV    +++  G+    GSS I++    G+L   ++  Y   E  N+F   + M+D L
Sbjct: 262 GKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKE-KNLFC-WNSMIDGL 319

Query: 481 KKEGYNPKLSEVLLEIDDE 499
              GY  +   +  E++ E
Sbjct: 320 AAHGYAKEALRMFAEMERE 338


>Medtr2g021710.1 | PPR containing plant-like protein | HC |
           chr2:7399056-7396074 | 20130731
          Length = 727

 Score =  232 bits (592), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 204/399 (51%), Gaps = 42/399 (10%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCY--I 139
           AL ++  ML+   HG   P+      ++  C R      G QLHG + K GF  DCY  I
Sbjct: 301 ALEIYRAMLQ-TGHG---PNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGF--DCYNFI 354

Query: 140 MNALIHMYSVFG---------DLGV----------------------ARELFDRMPDRDV 168
              +I+ Y+  G         ++GV                      A + FD+M  RDV
Sbjct: 355 QTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDV 414

Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGI 228
            SW+++I G    + P  A+ELF +ML  G++ N+ T+VSV  A A  G L  G+  H  
Sbjct: 415 FSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEY 474

Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX--XXXXXXXWTAMISGLASHGLC 286
           ++ +  I    N+  ALIDMYAK G I SA                W A+I GLASHG  
Sbjct: 475 MRSES-IPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHA 533

Query: 287 KEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
              +++F +M+  ++KP+  T   VLSAC +A LV     +F  MK  Y +EP I+H+GC
Sbjct: 534 SMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGC 593

Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDD 406
           ++D+L RAG L+EAE+ + +MPM+ D V+W TL+ AC+ H +    ER  +    +    
Sbjct: 594 MIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSH 653

Query: 407 SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
            G  +L SN+YA+ GKW   + VR +M  + + + PG S
Sbjct: 654 GGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYS 692



 Score =  110 bits (275), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 183/474 (38%), Gaps = 97/474 (20%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
            ++ +S+  Q+H+ I KLG   N   +N S +  +A     GD+  A+LL      L+S 
Sbjct: 65  SLSFISQGRQIHSLIFKLGLHFNTFIQN-SLINMYA---KCGDIKNAQLLFDGFATLDSV 120

Query: 62  YYNTMLRAYSLSSD--------------------------PTHHFHALSLFIFMLRRPTH 95
             N M+  Y  +                              + F   +L +F   R   
Sbjct: 121 SCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC- 179

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
           GV  P++ T   V+  C+ L      + +HG + KM       +   L+H Y +   +  
Sbjct: 180 GV-VPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVRE 238

Query: 156 ARELFDRMP-------------------------------DRDVVSWTSLIDGLVDHDRP 184
           AR LFD MP                               D+DV+SW ++IDG +   R 
Sbjct: 239 ARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRL 298

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
            EA+E++  ML+ G   N+  +V+++ AC    A+  G ++HG V  K+  +C   + T 
Sbjct: 299 REALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVV-KRGFDCYNFIQTT 357

Query: 245 LIDMYA-------------------------------KSGCIESAXXXXXXXXXXXXXXW 273
           +I  YA                               K+G ++ A              W
Sbjct: 358 IIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSW 417

Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
           + MISG A     K A++LF +M    +KP+E TM +V SA      ++E  +    M+ 
Sbjct: 418 STMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRS 477

Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL-WRTLIWACKVH 386
              I         ++D+ A+ G +  A  F N +  +  +V  W  +I     H
Sbjct: 478 E-SIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASH 530



 Score =  105 bits (263), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 150/366 (40%), Gaps = 79/366 (21%)

Query: 70  YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN-----------FTFPFVLKCCARLKLA 118
           +S SS P H  H +S   F    P H +    N                 LK C+ L   
Sbjct: 11  FSPSSLPFHLRH-ISTSTFTKPNPQHFIHIFTNARNHQNHHDSELALVSALKSCSSLSFI 69

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGD-------------------------- 152
            QG+Q+H  I K+G   + +I N+LI+MY+  GD                          
Sbjct: 70  SQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGY 129

Query: 153 -----LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVV 207
                +  AR+LFD MP++  VS+T++I G V +    EA+E+F  M   GV  ND T+V
Sbjct: 130 VRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLV 189

Query: 208 SVLRACADSGALSMGRKVHGI-------------------------VKEKKRI-----EC 237
           +V+ AC+  G +   R VHG+                         V+E +R+     E 
Sbjct: 190 NVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPER 249

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
                  +++ YAK+G ++ A              W  MI G    G  +EA++++  M 
Sbjct: 250 NLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAML 309

Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR----YG-IEPTIQHFGCVVDLLA 352
                P+E  +  ++SAC     + + + +   + KR    Y  I+ TI +F     ++ 
Sbjct: 310 QTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMD 369

Query: 353 RAGCLK 358
            A CL+
Sbjct: 370 LA-CLQ 374



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 10/227 (4%)

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
           + ++TM+  Y+ S  P     AL LF  ML     G   P+  T   V    A L   ++
Sbjct: 415 FSWSTMISGYAQSEHPKM---ALELFHKMLA----GGIKPNEVTMVSVFSAIATLGTLQE 467

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR--DVVSWTSLIDGL 178
           GK  H ++       +  +  ALI MY+  G +  A + F+++ D    V  W ++I GL
Sbjct: 468 GKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGL 527

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
             H      +E+F  M    ++ N  T + VL AC  +G +  G+++   +K    +E  
Sbjct: 528 ASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPD 587

Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGLASHG 284
                 +ID+  ++G +E A               W  +++   +HG
Sbjct: 588 IKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHG 634


>Medtr7g076707.1 | PPR containing plant-like protein | HC |
           chr7:28928185-28925455 | 20130731
          Length = 569

 Score =  231 bits (590), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/310 (40%), Positives = 178/310 (57%), Gaps = 1/310 (0%)

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
           NA+I  Y   G+L  AR+LFD MP RDV+SWTS+I       +  +A+ LF  M+   V+
Sbjct: 247 NAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVK 306

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
            ++ TV SVL ACA  GAL +G  VH  ++ K  +     V  ALIDMY K G +E    
Sbjct: 307 PDEITVASVLSACAHIGALDVGEAVHEYIR-KYDVNADIYVGNALIDMYCKCGAVEKGLS 365

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       WT++I+GLA +G    A++LF  M    V+P   T   VL AC +A +
Sbjct: 366 VFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGV 425

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           V +    F  M++ YG+ P ++H+GCVVDLL+R+G L  A +F+  MPM PD V+WR L+
Sbjct: 426 VDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILL 485

Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
            A +VH +   AE   K+ LE    +SG+YIL+SN YA   +W +  ++R LM +  + K
Sbjct: 486 SASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHK 545

Query: 441 PPGSSRIEVD 450
           P  SS +E++
Sbjct: 546 PSASSSVEIN 555



 Score =  150 bits (379), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 183/409 (44%), Gaps = 43/409 (10%)

Query: 27  PRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
           P +   L    ALSP+  L  A  L    P     ++N M+R +S ++ P     A+  +
Sbjct: 10  PISIFNLLKSYALSPTNILK-ANELFRQIPRPTLSHWNIMIRGWSQTNQP---IEAIRNY 65

Query: 87  IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
             M  +   G    +N T+PF+LK CAR+        +H  + K+GF SD ++ NALIH 
Sbjct: 66  NLMYSQALFG----NNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNALIHG 120

Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
           Y+ F +LG AR++FD M +RD+VSW SLI G     R  E + +F  M  A V+ +  T+
Sbjct: 121 YAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTM 180

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM------------------ 248
           V V+ AC   G   +   +   ++E K +E    +   LIDM                  
Sbjct: 181 VKVVLACTVLGEWGVVDAMIEYIEENK-VEVDVYLGNTLIDMYGRRSMVDLARRVFDRMR 239

Query: 249 -------------YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
                        Y K+G + +A              WT+MIS  +  G   +A+ LF E
Sbjct: 240 DRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQE 299

Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
           M    VKPDE T+ +VLSAC +   +     V   ++K Y +   I     ++D+  + G
Sbjct: 300 MMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRK-YDVNADIYVGNALIDMYCKCG 358

Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
            +++       M  K D+V W ++I    V+   + A  L    L  GV
Sbjct: 359 AVEKGLSVFEEMG-KRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGV 406



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 116/270 (42%), Gaps = 25/270 (9%)

Query: 42  SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
           +G+L  AR L    P  +   + +M+ +YS +        A+ LF  M+         PD
Sbjct: 256 AGNLVAARKLFDDMPHRDVISWTSMISSYSQAG---QFGKAVRLFQEMMVTKVK----PD 308

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
             T   VL  CA +     G+ +H +I K    +D Y+ NALI MY   G +     +F+
Sbjct: 309 EITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFE 368

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
            M  RD VSWTS+I GL  +     A+ LF  ML  GV     T V VL ACA +G +  
Sbjct: 369 EMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDK 428

Query: 222 G-------RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXW 273
           G        +V+G+  E K   C       ++D+ ++SG +  A               W
Sbjct: 429 GLEYFESMERVYGLTPEMKHYGC-------VVDLLSRSGNLGRAYEFIKRMPMDPDVVVW 481

Query: 274 TAMISGLASHG---LCKEAIDLFLEMETCN 300
             ++S    HG   L + A    LE +  N
Sbjct: 482 RILLSASQVHGNLHLAEIATKKLLETDPSN 511


>Medtr5g008690.1 | PPR containing plant-like protein | HC |
           chr5:1878296-1873339 | 20130731
          Length = 764

 Score =  231 bits (589), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 209/401 (52%), Gaps = 1/401 (0%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D+      L  C+ +   + GK++HG   +  F     + N LI MYS   DL  A  LF
Sbjct: 327 DSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLF 386

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
            ++ ++ +++W +++ G    DR  E   L   ML  GVE N  T+ S+L  CA    L 
Sbjct: 387 RKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQ 446

Query: 221 MGRKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
            G++ H  +VK +++ +    +  +L++MY++SG +  A              +T+MI G
Sbjct: 447 HGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMG 506

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
               G  + A+ LF EM   N+KPD  TM AVL AC ++ LV +  ++F  M + YGI+P
Sbjct: 507 YGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDP 566

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            ++H+ C+VDL  RAG L +A++ +  M  KP + +W TLI ACK+H +T   E    + 
Sbjct: 567 RVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKL 626

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           LEM  D SG Y+L +N+YA+  +   +AE R  M   G  + PG + ++V   L  F+ G
Sbjct: 627 LEMKPDHSGYYLLIANMYAAANRLDKEAEARTYMRDSGAKRTPGCAWVDVGRELCPFLAG 686

Query: 460 DYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEE 500
           D ++P +  I   +  +   +K  GY P    V  E D EE
Sbjct: 687 DTSNPRSCEISPMMKRLNILMKDAGYAPSEGVVSSEEDFEE 727



 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 195/439 (44%), Gaps = 64/439 (14%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDL-NYARLLLTSNPALNSY 61
           + ++S+  Q+HA I+ LG   N  P   SKL  F A   S DL   A+++   + + +  
Sbjct: 105 LKSLSQGKQIHAHIISLGIHQN--PILVSKLINFYA---SVDLLADAQIVAECSNSFDPL 159

Query: 62  YYNTMLRAY---SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           ++N ++  Y    L  D      A+S++  ML +   GV  PD++T+P VLK C  L   
Sbjct: 160 HWNMVISLYVKNCLFED------AISVYRRMLSK---GV-IPDDYTYPSVLKACGELLDY 209

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
             G  +H  I +       ++ NAL+ MY  FG L VARELFD MP RD VSW ++I   
Sbjct: 210 DSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCY 269

Query: 179 VDHDRPVEAIELFGRMLEAGVEVN----------------------------------DA 204
                  EA  LFG M EAG+E N                                    
Sbjct: 270 ASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSV 329

Query: 205 TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX 264
            +V  L AC+  GA+ +G+++HG    +   +   NV   LI MY++   +  A      
Sbjct: 330 AMVVGLNACSHIGAVKLGKEIHGHAV-RTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRK 388

Query: 265 XXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC-RNADLVR- 322
                   W AM+SG A     +E   L  EM    V+P+  T+ ++L  C R A+L   
Sbjct: 389 IDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHG 448

Query: 323 ---EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
                YMV    K+    +  +  +  +V++ +R+G + EA    +++  K D V + ++
Sbjct: 449 KEFHCYMV----KREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRK-DEVTYTSM 503

Query: 380 IWACKVHEDTERAERLMKQ 398
           I    V  D E A +L  +
Sbjct: 504 IMGYGVSGDGETALKLFAE 522



 Score = 86.7 bits (213), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 1/225 (0%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRD 167
           +L  C  LK   QGKQ+H  I  +G   +  +++ LI+ Y+    L  A+ + +     D
Sbjct: 98  LLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFD 157

Query: 168 VVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG 227
            + W  +I   V +    +AI ++ RML  GV  +D T  SVL+AC +      G  VH 
Sbjct: 158 PLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHK 217

Query: 228 IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCK 287
            ++E   I+    V  AL+ MY + G +E A              W  MIS  AS GL  
Sbjct: 218 AIQESS-IKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWD 276

Query: 288 EAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
           EA  LF  M    ++ +      +   C +    + A  +FS M+
Sbjct: 277 EAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMR 321



 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 18/267 (6%)

Query: 44  DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
           DLN+A LL           +N ML  ++       H        F+LR        P+  
Sbjct: 378 DLNHAYLLFRKIDEKGLITWNAMLSGFA-------HMDRSEEVSFLLREMLREGVEPNYV 430

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKM--GFGSDCYIMNALIHMYSVFGDLGVARELFD 161
           T   +L  CAR+   + GK+ H ++ K    F     + N+L+ MYS  G +  AR++FD
Sbjct: 431 TIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFD 490

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
            +  +D V++TS+I G         A++LF  M    ++ +  T+V+VL AC+ SG ++ 
Sbjct: 491 SLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQ 550

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX-XXXXXXWTAMISGL 280
           G+ +   + E   I+ +    + ++D++ ++G ++ A               W  +I   
Sbjct: 551 GQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGAC 610

Query: 281 ASHG---LCKEAIDLFLEMETCNVKPD 304
             HG   + + A    LEM     KPD
Sbjct: 611 KIHGNTVIGEWAAGKLLEM-----KPD 632


>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:18723182-18719939 | 20130731
          Length = 881

 Score =  230 bits (586), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 229/437 (52%), Gaps = 12/437 (2%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+H+ ILK G   N        LFT    S  G L  +  +       ++  + +M+  +
Sbjct: 457 QVHSYILKAGLVTNATVG--CSLFTM--YSKCGCLEESYEVFQQAIVKDNVSWASMISGF 512

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
                P     AL LF  ML +       PD+ T   +L  CA L+L R G+++HG   +
Sbjct: 513 VEHGYPDQ---ALRLFKEMLYQEV----VPDHITLISILTACADLRLLRTGREIHGSTFR 565

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           +G G++  +  AL++MYS  G L +AR++FD +P +D  + +SL+ G   +    E+  L
Sbjct: 566 LGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLL 625

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F  ML     V+  T+ S+L A +      +G ++H  + EK  ++   +V ++L+ MY+
Sbjct: 626 FHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHAYI-EKLGLQADVSVGSSLLTMYS 684

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           K G IE                WT++I   A HG   +A+  +  M++  V+PD  T   
Sbjct: 685 KCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQHGKGADALAAYELMKSEGVEPDAVTFVG 744

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           +LSAC ++ LV EA+   + M + Y I P+ +H+ C+VD+L R+G L+EAE F+N MP++
Sbjct: 745 ILSACSHSGLVEEAFFYLNSMIEDYKITPSHRHYACIVDILGRSGRLREAESFINNMPVE 804

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVR 430
           P+A++W TL+ ACKVH D E  +   ++ + +   D G+Y+  SN+ A   +W    ++R
Sbjct: 805 PNALIWGTLLAACKVHGDFELGKLAAEKVMGLEPSDVGAYVSFSNICADGEQWEEVTKIR 864

Query: 431 ELMNKKGLIKPPGSSRI 447
             +NK G+ K P  S +
Sbjct: 865 SSLNKTGMKKEPAWSVV 881



 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 14/321 (4%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           AL+LF  M R        P+++TFP +L  C  LK  + GK +HG   K G  +D ++  
Sbjct: 221 ALNLFSEMCRASL----MPNSYTFPSILTACCALKEMQIGKGVHGLAIKCG-ATDVFVET 275

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
           A++ +Y+ FG +  A   F +M  ++VVSWT++I G V  D    A++LF  M + G E+
Sbjct: 276 AIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEI 335

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE-SAXX 260
           N  TV SVL ACA    +   +++H +V +   I     V  AL++MYAK G +  S   
Sbjct: 336 NAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLI-LNVKVGAALVNMYAKIGGVGLSELA 394

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W +M+S  A +     A++LF  M    VKPDE  + ++LS   +  L
Sbjct: 395 FSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSL 454

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGC-VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
             + +     +K       T+   GC +  + ++ GCL+E+ +      +K D V W ++
Sbjct: 455 GSQVHSYI--LKAGLVTNATV---GCSLFTMYSKCGCLEESYEVFQQAIVK-DNVSWASM 508

Query: 380 IWACKVHEDTERAERLMKQHL 400
           I     H   ++A RL K+ L
Sbjct: 509 ISGFVEHGYPDQALRLFKEML 529



 Score =  126 bits (316), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 142/308 (46%), Gaps = 9/308 (2%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD F++  VL  C  L+ +  G Q+   + K GF S  Y+   ++ M+    +   A   
Sbjct: 134 PDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEALRF 193

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+     +V SW ++I   V +     A+ LF  M  A +  N  T  S+L AC     +
Sbjct: 194 FNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACCALKEM 253

Query: 220 SMGRKVHGIVKEKKRIECKCN---VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
            +G+ VHG+      I+C      V TA++D+YAK GC+  A              WTA+
Sbjct: 254 QIGKGVHGLA-----IKCGATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAI 308

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           ISG         A+ LF +M     + +  T+T+VLSAC   +L+ EA  + S +  + G
Sbjct: 309 ISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQIHS-LVLKLG 367

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           +   ++    +V++ A+ G +  +E   + M    D  +W +++ +   + ++ RA  L 
Sbjct: 368 LILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALELF 427

Query: 397 KQHLEMGV 404
              L  GV
Sbjct: 428 TVMLREGV 435



 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 5/287 (1%)

Query: 118 ARQGKQLHGFITKMGF-GSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID 176
           AR  K LH  + K  +  S  + M++LI +Y    D+ +A +LFD +    +VSW  +I 
Sbjct: 50  ARNTKILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMIS 109

Query: 177 GLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIE 236
           G V +   ++++E+F RM   G E ++ +  SVL AC    A   G +V  +V +   + 
Sbjct: 110 GYVRNSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLS 169

Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM 296
               V T ++DM+ K+     A              W A+IS    +G  + A++LF EM
Sbjct: 170 SG-YVQTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEM 228

Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
              ++ P+  T  ++L+AC     ++    V     K    +  ++    +VDL A+ GC
Sbjct: 229 CRASLMPNSYTFPSILTACCALKEMQIGKGVHGLAIKCGATDVFVET--AIVDLYAKFGC 286

Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           + EA    + M ++ + V W  +I      +DT  A +L K   ++G
Sbjct: 287 MSEAYRQFSQMQVQ-NVVSWTAIISGFVQQDDTTFALKLFKDMRQIG 332


>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:11375774-11372564 | 20130731
          Length = 938

 Score =  229 bits (583), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 245/500 (49%), Gaps = 35/500 (7%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPAL 58
           +  +   LQ H   +KLG   N        LF  ++L    S  G +  AR + +  P  
Sbjct: 457 IKVLEAGLQFHGLSVKLGLDTN--------LFAGSSLIDMYSKCGGIEDARKIYSCMPEW 508

Query: 59  NSYYYNTMLRAYSL--SSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLK 116
           +    N ++  Y++  + +  +  H + +              P   TF  ++ CC    
Sbjct: 509 SVVSMNALIAGYAIKDTKEAINLLHEMQILGL----------KPSEITFASLIDCCKESP 558

Query: 117 LARQGKQLHGFITKMGF--GSDCYIMNALIHMYSVFGDLGVARELFDRMPD-RDVVSWTS 173
               G Q+H  I K G   GS+ ++  +L+ MY     L     LF  + + + +V WT+
Sbjct: 559 KVILGMQIHCAILKNGLLCGSE-FLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTA 617

Query: 174 LIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
           LI G   +D   +A+ L+  M +  +  + AT V+VLRACA   +L  G+++H ++    
Sbjct: 618 LISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTG 677

Query: 234 RIECKCNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGLASHGLCKEAIDL 292
             +     S+AL+DMYAK G ++SA               W +MI G A +G  + A+ +
Sbjct: 678 -FDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKV 736

Query: 293 FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA 352
           F EM   +V PD+ T   VL+AC +A LV E   +F +M   Y I P + H  C+VDLL 
Sbjct: 737 FDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNMVNYYSIHPRVDHHACMVDLLG 796

Query: 353 RAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYIL 412
           R G L+EAE+F++ + ++P+A++W  L+ AC +H D +R  R  ++ +E+   +S  Y+L
Sbjct: 797 RCGFLEEAEEFIDKLDVEPNAMIWANLLGACSIHGDEKRGLRAAEKLIELEPQNSSPYVL 856

Query: 413 ASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVK 472
             N++A  G W     +R  M +  + K PG S I VD   + FV  D +HP +D I   
Sbjct: 857 LYNMHAGSGHWDEAKSLRRTMVQNEVQKTPGCSWIVVDKTTNLFVASDMSHPSSDEISHA 916

Query: 473 LDEMV-----DKLKKEGYNP 487
           L  +      ++L+++G +P
Sbjct: 917 LKHLAALMRDNRLQEDGISP 936



 Score =  129 bits (324), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 175/399 (43%), Gaps = 34/399 (8%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLH+ I+K   ++N    N   L    A   +G L  AR         ++  +N +L  Y
Sbjct: 364 QLHSTIIKKRFTDNLCVNN--ALVDMYA--KAGALKEARKQFERMKYRDNISWNAILVGY 419

Query: 71  SLSSDPTHHFHALSLFIFMLRRPT-HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
               + T  F+       M RR   HGV  PD      +L  C  +K+   G Q HG   
Sbjct: 420 VQEEEETEAFN-------MFRRMNRHGV-VPDEVCMASILSACGNIKVLEAGLQFHGLSV 471

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
           K+G  ++ +  ++LI MYS  G +  AR+++  MP+  VVS  +LI G    D   EAI 
Sbjct: 472 KLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIKDTK-EAIN 530

Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
           L   M   G++ ++ T  S++  C +S  + +G ++H  + +   +     + T+L+ MY
Sbjct: 531 LLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMY 590

Query: 250 AKSGCI-ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
             S  + E                WTA+ISG   +    +A++L+ EM   N+ PD+ T 
Sbjct: 591 MDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATF 650

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG---------CVVDLLARAGCLKE 359
             VL AC           + S ++    I   I H G          +VD+ A+ G +K 
Sbjct: 651 VTVLRACA----------LLSSLQDGQEIHSLIFHTGFDLDELTSSALVDMYAKCGDVKS 700

Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
           A      +P+K D + W ++I     +   ERA ++  +
Sbjct: 701 AAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDE 739



 Score =  126 bits (317), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 152/304 (50%), Gaps = 4/304 (1%)

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           T   VL   A L     G  +HG   K+GF S  Y+ ++LI+MY     L  A+++FD +
Sbjct: 244 TLASVLSAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVV 303

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
            DR+VV W +++     +    + +ELF  M+  G + ++ T  S+L +CA    L +GR
Sbjct: 304 CDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGR 363

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
           ++H  + +K+  +  C V+ AL+DMYAK+G ++ A              W A++ G    
Sbjct: 364 QLHSTIIKKRFTDNLC-VNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQE 422

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
               EA ++F  M    V PDE  M ++LSAC N   V EA + F  +  + G++  +  
Sbjct: 423 EEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIK-VLEAGLQFHGLSVKLGLDTNLFA 481

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
              ++D+ ++ G +++A    + MP +   V    LI    + +DT+ A  L+ +   +G
Sbjct: 482 GSSLIDMYSKCGGIEDARKIYSCMP-EWSVVSMNALIAGYAI-KDTKEAINLLHEMQILG 539

Query: 404 VDDS 407
           +  S
Sbjct: 540 LKPS 543



 Score =  126 bits (317), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 155/341 (45%), Gaps = 5/341 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD FT+  +L  CA       G+QLH  I K  F  +  + NAL+ MY+  G L  AR+ 
Sbjct: 341 PDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQ 400

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+RM  RD +SW +++ G V  +   EA  +F RM   GV  ++  + S+L AC +   L
Sbjct: 401 FERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVL 460

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G + HG+   K  ++      ++LIDMY+K G IE A                A+I+G
Sbjct: 461 EAGLQFHGL-SVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAG 519

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            A     KEAI+L  EM+   +KP E T  +++  C+ +  V     +   + K  G+  
Sbjct: 520 YAIKD-TKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKN-GLLC 577

Query: 340 TIQHFGC-VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
             +  G  ++ +   +  L E     + +      VLW  LI     ++ +++A  L ++
Sbjct: 578 GSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYRE 637

Query: 399 HLEMGV-DDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
             +  +  D  +++      A +    +  E+  L+   G 
Sbjct: 638 MRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGF 678



 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 146/331 (44%), Gaps = 10/331 (3%)

Query: 79  HFHALSLFIFMLRRPTHGVPAPDNF---TFPFVLKCCARLKLARQGKQLHGFITKMGFGS 135
           HF+A    +   R   + V   DN    TF  ++    R+ +     QL   + + GF  
Sbjct: 115 HFYAKCKCLNSARTLFNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEM-QSGFVL 173

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPD-RDVVSWTSLIDGLVDHDRPVEAIELFGRM 194
           D  ++  +++     G L  A ELFD M    +VV+W  +I G        EA+E + +M
Sbjct: 174 DELVIVTVLNACVNLGKLDHACELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKM 233

Query: 195 LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGC 254
              GV  + +T+ SVL A A  G L  G  VHG    K   E    V+++LI+MY K   
Sbjct: 234 RMNGVISSRSTLASVLSAVAGLGDLGCGLLVHG-EAVKLGFESSVYVASSLINMYGKCEM 292

Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
           +  A              W  ++   A +G   + ++LF EM  C   PDE T +++LS+
Sbjct: 293 LCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSS 352

Query: 315 CRNADLVREAYMVFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDA 373
           C   D +     + S  +KKR+     + +   +VD+ A+AG LKEA      M  + D 
Sbjct: 353 CACFDFLDIGRQLHSTIIKKRFTDNLCVNN--ALVDMYAKAGALKEARKQFERMKYR-DN 409

Query: 374 VLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
           + W  ++      E+   A  + ++    GV
Sbjct: 410 ISWNAILVGYVQEEEETEAFNMFRRMNRHGV 440


>Medtr8g096030.1 | PPR containing plant-like protein | HC |
           chr8:40057307-40055314 | 20130731
          Length = 494

 Score =  228 bits (580), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 217/436 (49%), Gaps = 40/436 (9%)

Query: 47  YARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFP 106
           YA  L  S P   ++ +NT++R ++L S P     AL +F+  LRR        D  TFP
Sbjct: 65  YALSLFNSIPNPTTFTFNTLIRIHTLLSSP---LSALKIFL-SLRRL---FLTLDFHTFP 117

Query: 107 FVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSV----------FGDLGV- 155
            +LK  ++L      + LH  + K GF  D ++MN+LI +YSV          F + G  
Sbjct: 118 LILKASSQLHSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYR 177

Query: 156 --------------------ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
                               ARELFD MP R+ V+W ++I G        EA+ELF  M+
Sbjct: 178 DIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMI 237

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
                 ++  +VSVL ACA  G L  GR VH  +  +  I     ++T L+D+YAK GC+
Sbjct: 238 GLEFIPDNIALVSVLSACAQLGELEQGRFVHDYIT-RNGIRVDSYLTTGLVDLYAKCGCV 296

Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
           E A              W AM+ G A HG     ++ F  M    +KPD  T   VL  C
Sbjct: 297 EIARETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGC 356

Query: 316 RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
            +A LV EA  VF +M+  YG+    +H+GC+ D+LARAG ++E+ + +  MP   D   
Sbjct: 357 SHAGLVCEARKVFDEMETVYGVAREGKHYGCMADMLARAGLIEESRELIKGMPNGGDVFA 416

Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRE-LMN 434
           W  L+  C++H + E A++  +Q +E+  +D G Y + +N+YA+  +W +  ++R+ L  
Sbjct: 417 WGGLLGGCRIHGNVEIAKQAAQQVMEIKPEDGGVYSVMANIYANTEQWDDLVKIRKSLGA 476

Query: 435 KKGLIKPPGSSRIEVD 450
            +   K  G+S I ++
Sbjct: 477 NRRAKKITGTSLIRLN 492



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 36/283 (12%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYS---LSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
           L+ AR L    P  N   + TM+  YS   L  +    F+ +    F+          PD
Sbjct: 195 LDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFI----------PD 244

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
           N     VL  CA+L    QG+ +H +IT+ G   D Y+   L+ +Y+  G + +ARE F+
Sbjct: 245 NIALVSVLSACAQLGELEQGRFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFE 304

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
              ++DV +W +++ G   H + +  +E F RM+  G++ +  T + VL  C+ +G +  
Sbjct: 305 SCTNKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCE 364

Query: 222 GRK-------VHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXW 273
            RK       V+G+ +E K   C       + DM A++G I ES               W
Sbjct: 365 ARKVFDEMETVYGVAREGKHYGC-------MADMLARAGLIEESRELIKGMPNGGDVFAW 417

Query: 274 TAMISGLASHG---LCKEAIDLFLEMETCNVKPDERTMTAVLS 313
             ++ G   HG   + K+A    +E     +KP++  + +V++
Sbjct: 418 GGLLGGCRIHGNVEIAKQAAQQVME-----IKPEDGGVYSVMA 455


>Medtr5g024360.1 | PPR containing plant-like protein | HC |
           chr5:9808546-9804666 | 20130731
          Length = 611

 Score =  227 bits (579), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/403 (35%), Positives = 212/403 (52%), Gaps = 17/403 (4%)

Query: 56  PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
           P  N   +  ++  Y ++  P     AL +F  M R    GV A +  T    L  CAR 
Sbjct: 169 PKWNVVAWTCLINGYVINDQPRE---ALEVFKEMGRW---GVEA-NEVTMVNALIACARC 221

Query: 116 KLARQGKQLHGFITKMGF-------GSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV 168
           +    G+ +H  + K G+        S+  +  A++ MY+  G L VARELF++MP+R++
Sbjct: 222 RDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNI 281

Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGI 228
           V+W  +I+    ++R  EA+ LF  ML  G   + AT +SVL  CA    L++G  VH  
Sbjct: 282 VAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAY 341

Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLASHGLCK 287
           +  K  +     ++TAL+DMYAK+G + SA               WT+MI+ LA HG   
Sbjct: 342 LL-KSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGN 400

Query: 288 EAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGC 346
           EA+ LF  M E  ++ PD  T   VL AC +  LV EA   F+ M K YGI P  +H+ C
Sbjct: 401 EALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSC 460

Query: 347 VVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDD 406
           +VDLL+RAG  +EAE  M  M ++P+  +W  L+  C++HE+   A ++  +  E+    
Sbjct: 461 MVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQ 520

Query: 407 SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
           SG Y L SN+YA+ GKW      R++M  K + K  G S +E+
Sbjct: 521 SGIYALLSNIYANSGKWEEVNRTRKMMKHKRIAKTIGHSSVEM 563



 Score =  185 bits (470), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 209/443 (47%), Gaps = 27/443 (6%)

Query: 13  HAQILKLGTSNNDAPRNFSKLFTFAALSPSGD-LNYARLLLTSNPALNSYYYNTMLRAYS 71
           HA IL   T+ N      SKL  F   S   +  NYA LL     + N Y +N+M++ Y+
Sbjct: 24  HALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYANLLFRQIHSPNVYIFNSMIKGYA 83

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
            S++PT   H   L+  ML+       +PD+FTFPFVLK C+ +     GK +H  I K 
Sbjct: 84  KSNNPTMSLH---LYKQMLQNGY----SPDHFTFPFVLKACSFIYDQVSGKCVHSCILKS 136

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
           GF ++ Y+   L++MY    ++    ++FD++P  +VV+WT LI+G V +D+P EA+E+F
Sbjct: 137 GFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVF 196

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR----IECKCNV--STAL 245
             M   GVE N+ T+V+ L ACA    +  GR VH  V +            NV  +TA+
Sbjct: 197 KEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAI 256

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           ++MYAK G +  A              W  MI+    +    EA+ LF  M      PD+
Sbjct: 257 VEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDK 316

Query: 306 RTMTAVLSACRNADLVR-----EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
            T  +VLS C    ++       AY++ S+M K   +   +      +D+ A+ G L  A
Sbjct: 317 ATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATAL------LDMYAKNGELGSA 370

Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK--QHLEMGVDDSGSYILASNVYA 418
           +   N    K D V+W ++I A  +H     A  L +  Q     V D  +YI      +
Sbjct: 371 QKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACS 430

Query: 419 SVGKWSNKAEVRELMNKKGLIKP 441
            VG      +   LM K   I P
Sbjct: 431 HVGLVEEAQKQFNLMTKSYGILP 453


>Medtr4g082470.1 | PPR containing plant-like protein | HC |
           chr4:32162319-32165367 | 20130731
          Length = 700

 Score =  226 bits (576), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 125/351 (35%), Positives = 189/351 (53%), Gaps = 1/351 (0%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++ T   +L  CA+L+    GK LH  + K G   D  + N+L+ MY+  G +  A  +
Sbjct: 340 PNSVTLASLLSACAQLENIVMGKLLHVLVVKYGL-DDTSLRNSLVDMYAKCGLIPDAHYV 398

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F    D+DVVSW S+I G        EA++LF RM       +  TVV VL ACA  GA 
Sbjct: 399 FATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAH 458

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
            +G  +HG   +   +     V TAL++ YAK G   SA              W AMI G
Sbjct: 459 QIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGG 518

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
               G    ++ LF +M    + P+E   T +L+AC ++ +V E  M+F  M K     P
Sbjct: 519 CGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVP 578

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
           +++H+ C+VDLLARAG L+EA DF++ MP++P   ++   +  C +H + +  E  +++ 
Sbjct: 579 SMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRM 638

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVD 450
           LE+  D +  Y+L SN+YAS G+W    EVRE++ ++GL K PG S +E+D
Sbjct: 639 LELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMD 689



 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 198/421 (47%), Gaps = 22/421 (5%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G L +AR L    P+   + +  ++R + L+     H H +S +   L R T G    D 
Sbjct: 82  GFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDV---HSHVVSFY--NLARTTLG-SFNDL 135

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
             F  +LK  ++L+      +LH  I K    +D +++ +L+  YS  G L  AR++FD 
Sbjct: 136 VVFSILLKTASQLRDIVLTTKLHCNILKSN-AADSFVLTSLVDAYSKCGKLRDARKVFDE 194

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           +PDR VVSWTS+I   V ++   E + LF RM E  ++ N  TV S++ AC   G L  G
Sbjct: 195 IPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQG 254

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX------XXXWTAM 276
           + VHG V  K  IE    ++T+L++MY K G I  A                    WTAM
Sbjct: 255 KWVHGYVI-KNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAM 313

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
           I G    G  + A++LF + +   + P+  T+ ++LSAC   + +    ++   +  +YG
Sbjct: 314 IVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHV-LVVKYG 372

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA-CKVHEDTERAERL 395
           ++ T      +VD+ A+ G + +A  ++ A  +  D V W ++I    +     E  +  
Sbjct: 373 LDDTSLR-NSLVDMYAKCGLIPDAH-YVFATTVDKDVVSWNSVISGYAQSGSAYEALDLF 430

Query: 396 MKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHE 455
            +  +E  + D+ + +   +  ASVG       +     K GL+    SS I V  AL  
Sbjct: 431 NRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLV----SSSIYVGTALLN 486

Query: 456 F 456
           F
Sbjct: 487 F 487


>Medtr7g082550.1 | PPR containing plant-like protein | HC |
           chr7:31648795-31646693 | 20130731
          Length = 487

 Score =  224 bits (572), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 195/383 (50%), Gaps = 18/383 (4%)

Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDV 168
           L  C   +    G Q H    ++GF ++ Y+ ++LI +YS  G LG A  +FD M  R+V
Sbjct: 115 LSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNV 174

Query: 169 VSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGI 228
           VSWT++I G     R    +ELF RM    ++ N  T  S+L AC  SGAL  GR VH  
Sbjct: 175 VSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQ 234

Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKE 288
           + +     C  +V  ALI MY+K G I  A              W +MI G         
Sbjct: 235 IIQMG-FHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMIVG--------- 284

Query: 289 AIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
                  M    V PD  T   +LS+CR+  LV+E  + FS M   +G++P + H+ C+V
Sbjct: 285 -------MRIMGVNPDAVTFLGILSSCRHGGLVKEGQVYFSSMVD-HGLQPELDHYSCIV 336

Query: 349 DLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
           DLL RAG L EA DF+  MP+ P+AV+W +L+ + ++H +     R  +  L +    S 
Sbjct: 337 DLLGRAGLLLEALDFIQNMPVCPNAVIWGSLLSSSRLHGNVWIGIRAAESRLSLEPGCSS 396

Query: 409 SYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADN 468
           + +  +N+YASVG W+  A VR+LM  KGL   PG S IEV   +H F   D ++   + 
Sbjct: 397 TLLQLANLYASVGWWNQVARVRQLMKDKGLKPNPGCSWIEVKNKVHRFESQDKSNSRMNG 456

Query: 469 IFVKLDEMVDKLKKEGYNPKLSE 491
           I + +D +VD +       ++SE
Sbjct: 457 ILLIMDSLVDHMSGLSLQFQISE 479


>Medtr6g093170.1 | PPR containing protein | HC |
           chr6:35177726-35180122 | 20130731
          Length = 608

 Score =  224 bits (571), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 204/388 (52%), Gaps = 35/388 (9%)

Query: 109 LKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM----- 163
           L  CA  +    GK++HGFI +        + NAL+ MY   G + VARE+FD M     
Sbjct: 212 LTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNV 271

Query: 164 --------------------------PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
                                     P RDVV WT++I+G V  +R  EA+ LF  M   
Sbjct: 272 NCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVR 331

Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
           GV+ +   VV++L  CA  G L  GR +H  V+E  RI     V T+LI+MYAK GC+E 
Sbjct: 332 GVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVREN-RIVVDAVVGTSLIEMYAKCGCVEK 390

Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
           +              WT++I GLA +G   EA++LF EM+    KPD+ T   +L+AC +
Sbjct: 391 SLEVFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSH 450

Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD---AV 374
             LV E + +F  M   YGIEP ++H+GC +DLL RAG L EAE+ +  +P + +     
Sbjct: 451 GGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEELIKKLPDQKNETIVA 510

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           ++ + + AC+ + +T+  ER+     ++   DS  + L +++YAS  +W + ++ R  M 
Sbjct: 511 IYGSFLSACRTYGNTDMGERIATALEKVKSSDSSLHSLLASIYASADRWEDASKTRSKMK 570

Query: 435 KKGLIKPPGSSRIEVDGALHEFVMGDYN 462
              + K PG S IEVDG+ ++  +GD++
Sbjct: 571 DLHIRKVPGCSAIEVDGSGNQGGVGDFS 598



 Score =  163 bits (412), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 207/423 (48%), Gaps = 49/423 (11%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAA-LSPSGDLNYARLLL--TSNPALNSYYYNTML 67
           Q+H+ I   G   +    N  KLF+ +  L+ +   +Y+  +   T +P+L  + YN ++
Sbjct: 20  QIHSLIFTTGLHQDTHTLN--KLFSVSIHLNNNNYFHYSLSIFNHTLHPSL--FLYNLLI 75

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
           +++       + F  L      LR   +G+  PDN+T+PFVLK  A +   RQG ++H F
Sbjct: 76  KSFF----KRNSFQTLISLFNQLR--LNGL-YPDNYTYPFVLKAVAFIADFRQGTKIHAF 128

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           + K G  SD Y+ N+ + MY+  G +   R+LFD + +RD VSW  +I G V   R  EA
Sbjct: 129 VFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEA 188

Query: 188 IELFGRM-LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK------------R 234
           +E+F RM +++  ++++ATVVS L ACA S  + +G+++HG + EK+             
Sbjct: 189 VEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLD 248

Query: 235 IECKC------------------NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAM 276
           + CKC                  N  T+++  Y   G ++ A              WTAM
Sbjct: 249 MYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAM 308

Query: 277 ISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK-RY 335
           I+G        EA+ LF EM+   VKPD+  + A+L+ C     +     +   +++ R 
Sbjct: 309 INGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRI 368

Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
            ++  +     ++++ A+ GC++++ +  N +  K D   W ++I    ++  T  A  L
Sbjct: 369 VVDAVVG--TSLIEMYAKCGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTIEALEL 425

Query: 396 MKQ 398
            ++
Sbjct: 426 FEE 428



 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 7/216 (3%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G+L+ AR L   +P  +   +  M+  Y           A++LF  M  R   GV  PD 
Sbjct: 285 GELDKARDLFDKSPTRDVVLWTAMINGYV---QFNRFDEAVALFEEMQVR---GVK-PDK 337

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           F    +L CCA+L     G+ +H ++ +     D  +  +LI MY+  G +  + E+F+ 
Sbjct: 338 FIVVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNG 397

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           + ++D  SWTS+I GL  + + +EA+ELF  M   G + +D T + +L AC+  G +  G
Sbjct: 398 LKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEG 457

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
            K+   +     IE         ID+  ++G +  A
Sbjct: 458 HKLFHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEA 493


>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:14788174-14785760 | 20130731
          Length = 804

 Score =  223 bits (569), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 229/464 (49%), Gaps = 23/464 (4%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPA 57
           E+      +++H   L++G          S +F   +L    + SG    A  +      
Sbjct: 350 ELGLFKLGMEVHGYSLRMGIE--------SDIFIGNSLIDMYAKSGSSRVASTIFNKMGD 401

Query: 58  LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKL 117
            N   +N+M+  ++      HHF A+ L   + +   HG   P+N TF  VL  CARL  
Sbjct: 402 RNIVSWNSMVANFA---QNRHHFAAVEL---LRQMQAHG-ENPNNVTFTNVLPACARLGF 454

Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
              GK++H  I + G  +D ++ NAL  MYS  G L +AR +F+ +  +D VS+  LI G
Sbjct: 455 LNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVFN-VSIKDKVSYNILIIG 513

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
                   E++ LF  M  +G+  +  + + ++ ACA   ++  G+++HG +  +K    
Sbjct: 514 YSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLV-RKLFHT 572

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM- 296
               + +L+D+Y K G I+ A              W  MI G    G  + AI+LF  M 
Sbjct: 573 HLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMK 632

Query: 297 ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGC 356
           E   V+ D  +  AVLSAC +  L+ +    F  M+  Y IEPT  H+ C+VDLL RAG 
Sbjct: 633 EDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQD-YNIEPTHTHYACMVDLLGRAGQ 691

Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNV 416
           ++EA + +  +  +PDA +W  L+ AC+++ + E      +   ++  D  G YIL SN+
Sbjct: 692 IEEAANLIRGLSFEPDANIWGALLGACRIYGNVELGHWAAEHLFKLKPDHCGYYILLSNM 751

Query: 417 YASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
           YA  G+W     VRELM  +G  K PG S +++   +H F++G+
Sbjct: 752 YAEAGRWDEANMVRELMKSRGAKKNPGCSWVQIGDQVHGFLVGE 795



 Score =  147 bits (370), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 189/410 (46%), Gaps = 42/410 (10%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTF----AALSPSGDLNYAR-------LLLT 53
           T+S+  QLHA               FS L  F     ++S S  L YA        L+L 
Sbjct: 46  TLSQTNQLHA---------------FSILNAFLPHSVSISASLILKYASFRHPETSLILF 90

Query: 54  SNP---ALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK 110
            N    +  ++ +NT++RAYS++      F    ++  M+R    GV  PD+ T+PFVLK
Sbjct: 91  QNTLPFSKTAFLWNTLIRAYSIAG----FFDGFGVYNTMVRS---GVK-PDDHTYPFVLK 142

Query: 111 CCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVS 170
            C+      +G+++HG + K+GF  D ++ N L+  Y   G    A  +FD M +RD VS
Sbjct: 143 ACSDYLKFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVS 202

Query: 171 WTSLIDGLVDHDRPVEAIELFGRMLEAG--VEVNDATVVSVLRACADSGALSMGRKVHGI 228
           W ++I    D     E++  F  M+ A   V  +  TVVSVL  CADS  + M R VHG 
Sbjct: 203 WNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGY 262

Query: 229 VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKE 288
           V  K  +     V  AL+D+Y K G  E+               W A+I+G +  GL  +
Sbjct: 263 VF-KVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMD 321

Query: 289 AIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
           A+D F  M    ++P+  T++++L       L +   M       R GIE  I     ++
Sbjct: 322 ALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLG-MEVHGYSLRMGIESDIFIGNSLI 380

Query: 349 DLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
           D+ A++G  + A    N M  + + V W +++     +     A  L++Q
Sbjct: 381 DMYAKSGSSRVASTIFNKMGDR-NIVSWNSMVANFAQNRHHFAAVELLRQ 429



 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 14/318 (4%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P+  T   +L     L L + G ++HG+  +MG  SD +I N+LI MY+  G   VA  +
Sbjct: 336 PNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTI 395

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F++M DR++VSW S++     +     A+EL  +M   G   N+ T  +VL ACA  G L
Sbjct: 396 FNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFL 455

Query: 220 SMGRKVHGIVKEKKRIECKCN----VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
           ++G+++H      + I+  C     +S AL DMY+K G + S               +  
Sbjct: 456 NVGKEIHA-----RIIQTGCATDLFLSNALTDMYSKCGHL-SLARNVFNVSIKDKVSYNI 509

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
           +I G +      E+++LF EM    + PD  +   ++SAC +   +++   +   + ++ 
Sbjct: 510 LIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKL 569

Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
                +     ++DL  + G +  A    + +  K D   W T+I    +  + E A  L
Sbjct: 570 -FHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHK-DVASWNTMILGYGMRGEFETAINL 627

Query: 396 MKQHLE-MGVD-DSGSYI 411
            +   E  GV+ DS SYI
Sbjct: 628 FEAMKEDGGVEYDSVSYI 645



 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 120/272 (44%), Gaps = 11/272 (4%)

Query: 80  FHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYI 139
           FH  SL  F        V  PD  T   VL  CA  +     + +HG++ K+G      +
Sbjct: 215 FHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKV 274

Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV 199
            NAL+ +Y   G     +++FD M +R+ VSW ++I G       ++A++ F  M+  G+
Sbjct: 275 GNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGM 334

Query: 200 EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
             N  T+ S+L    + G   +G +VHG    +  IE    +  +LIDMYAKSG    A 
Sbjct: 335 RPNPVTISSMLPVLGELGLFKLGMEVHG-YSLRMGIESDIFIGNSLIDMYAKSGSSRVAS 393

Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
                        W +M++  A +     A++L  +M+     P+  T T VL AC    
Sbjct: 394 TIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPAC---- 449

Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
               A + F ++ K   I   I   GC  DL 
Sbjct: 450 ----ARLGFLNVGKE--IHARIIQTGCATDLF 475


>Medtr1g067280.1 | PPR containing plant-like protein | HC |
           chr1:28986458-28983697 | 20130731
          Length = 684

 Score =  223 bits (568), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 232/456 (50%), Gaps = 38/456 (8%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N M+  YS S     +     L++ ML     G+  P+  T   V++ C + K    G 
Sbjct: 224 WNAMIGGYSQSG---FYEECKRLYLEMLGLEGKGI-LPNAVTIGSVMQACGQSKDLSFGM 279

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVS------------ 170
           ++H F+   G  +D ++ NA+I MY+  G L  ARELFD M ++D VS            
Sbjct: 280 EVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMING 339

Query: 171 -------------------WTSLIDGLVDHDRPVEAIELFGRMLEAGVEV--NDATVVSV 209
                              W  +I G+V +++   A++L   M   G+ +  N  T+ S+
Sbjct: 340 FVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSI 399

Query: 210 LRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX 269
           +   +    L   ++VHG    ++  +    V+TA++D YAK G I  A           
Sbjct: 400 IPLFSYFSNLRGLKEVHGYAI-RRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRS 458

Query: 270 XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFS 329
              WT++I   ASHG    A+ L+ +M    ++PD  T+T+VL+AC ++ LV EA+ VF+
Sbjct: 459 LIIWTSIIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFN 518

Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDT 389
            M  ++GI+P ++H+ C+V +L+RAG L EAE F++ MP +P A +W  L+    +++D 
Sbjct: 519 AMPSKHGIQPVVEHYACMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYDDV 578

Query: 390 ERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
           E  +       E+  + +G+YI+ +N+Y+  G+W    ++RE M K G  K  GSS IE 
Sbjct: 579 EIGKFACDHLFEIEPEHTGNYIIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSSWIET 638

Query: 450 DGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
            G L  F+  D ++  +D I+  L  ++  +++EGY
Sbjct: 639 SGKLLGFIAKDMSNEMSDEIYALLKGLLGLMREEGY 674



 Score =  132 bits (331), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 192/446 (43%), Gaps = 65/446 (14%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNF--SKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           + +  QLHA+      +    P NF  +KL TF A   S  +  AR +    P  NS+ +
Sbjct: 65  IRQGKQLHARFFPFAIT----PDNFIATKLITFYA--KSNLIRNARNVFDKIPHKNSFSW 118

Query: 64  NTMLRAY---SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA-- 118
           N+M+ AY   SL +D      ALSLF   +    + V +PDNFT   +LK  A       
Sbjct: 119 NSMIIAYTSKSLFND------ALSLFASFVSSTDNNV-SPDNFTMTSILKTLALSSSVCY 171

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
           +  KQ+H      GF SD  ++NAL+  Y   G + +AR++FD M +RD+V+W ++I G 
Sbjct: 172 KSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGY 231

Query: 179 VDHDRPVEAIELFGRML---EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
                  E   L+  ML     G+  N  T+ SV++AC  S  LS G +VH  +K+   I
Sbjct: 232 SQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDG-I 290

Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
           E    +  A+I MYAK G +  A              + ++ISG   +G   EA+D+   
Sbjct: 291 ETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKG 350

Query: 296 METCNVKPDERTMTAVLSAC-------RNADLVREA--------------------YMVF 328
           +E     P   T   V+          R  DLVRE                     +  F
Sbjct: 351 IEN----PGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYF 406

Query: 329 SDMKK---------RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
           S+++          R   +  I     +VD  A+ G +  A    +    +   ++W ++
Sbjct: 407 SNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSR-SLIIWTSI 465

Query: 380 IWACKVHEDTERAERLMKQHLEMGVD 405
           I+A   H D   A  L  Q L+ G+ 
Sbjct: 466 IYAYASHGDASLALGLYNQMLDRGIQ 491



 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 31/330 (9%)

Query: 94  THGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDL 153
           THG    D   +   ++ C   +L RQGKQLH          D +I   LI  Y+    +
Sbjct: 42  THG-GGLDIAAYGSAIQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLI 100

Query: 154 GVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA---GVEVNDATVVSVL 210
             AR +FD++P ++  SW S+I          +A+ LF   + +    V  ++ T+ S+L
Sbjct: 101 RNARNVFDKIPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSIL 160

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKC---------NVSTALIDMYAKSGCIESAXXX 261
           +  A S ++          K  K+I C            V  AL+  Y + G IE A   
Sbjct: 161 KTLALSSSVCY--------KSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKV 212

Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM---ETCNVKPDERTMTAVLSACRNA 318
                      W AMI G +  G  +E   L+LEM   E   + P+  T+ +V+ AC  +
Sbjct: 213 FDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQS 272

Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
             +     V   MK   GIE  +     ++ + A+ G L  A +  + M  K D V +R+
Sbjct: 273 KDLSFGMEVHRFMKDD-GIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEK-DEVSYRS 330

Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSG 408
           +I    ++   + A  ++K     G+++ G
Sbjct: 331 IISGYMINGFVDEALDVLK-----GIENPG 355


>Medtr5g071190.1 | PPR containing plant-like protein | HC |
           chr5:30193271-30196237 | 20130731
          Length = 887

 Score =  222 bits (565), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 150/444 (33%), Positives = 228/444 (51%), Gaps = 23/444 (5%)

Query: 141 NALIHMYSVFGDLGVARELF-----DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           N +I  Y   G    A +LF     D    R+  SW SLI G V   +  +A+++F  M 
Sbjct: 459 NIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQ 518

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
              +  N  T++S+L  CA+  A    +++H     +  +  + +VS  LID YAKSG +
Sbjct: 519 FCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVS-ELSVSNLLIDSYAKSGNL 577

Query: 256 ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
             +              W +M+S    HG  + A+DLF +M    ++P+  T  ++L A 
Sbjct: 578 MYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAY 637

Query: 316 RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVL 375
            +A +V E   VFS + K Y +   ++H+  +V LL R+G L EA DF+ +MP++P++ +
Sbjct: 638 GHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSV 697

Query: 376 WRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNK 435
           W  L+ AC++H +   A    K+ LE    ++ +  L S  Y+  GK+  + E       
Sbjct: 698 WGALLTACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKFEPEGE------- 750

Query: 436 KGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPK--LSEVL 493
           K + KP G S IE +  +H FV+GD ++P        LD++   LK+   N K  +S+  
Sbjct: 751 KAVNKPIGQSWIERNNVVHTFVVGDQSNP-------YLDKLHSWLKRVAVNVKTHVSDNE 803

Query: 494 LEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKI-RIVKNLRSCEDCHEFMKLISKIYQR 552
           L I++EEK      HSEKLA A+ LI      +I RIVK LR C DCH+  K IS  Y  
Sbjct: 804 LYIEEEEKENTSSVHSEKLAFAFALIDPHNKPQILRIVKKLRMCRDCHDTAKYISMAYGC 863

Query: 553 DIIVRDRIRFHHFKNGDCSCKDYW 576
           +I + D    HHFK G CSC+DYW
Sbjct: 864 EIYLSDSNCLHHFKGGHCSCRDYW 887



 Score = 93.2 bits (230), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 163/390 (41%), Gaps = 51/390 (13%)

Query: 57  ALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLK 116
           A + Y + +M+  ++     +H   AL L   M      GV A +N T       CA LK
Sbjct: 316 APDVYTWTSMISGFTQKGRISH---ALDLLKEMF---LAGVEA-NNITIASAASACAALK 368

Query: 117 LARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID 176
               G ++H    KM    +  + N+LI MY   GDL  A+ +FD M +RDV SW S+I 
Sbjct: 369 SLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIG 428

Query: 177 GLVDHDRPVEAIELFGRMLEAGVEVNDAT----VVSVLRACADSGALSMGRKVHGIVKEK 232
           G        +A ELF +M E+    N  T    +   +++ A+  AL + + +    K K
Sbjct: 429 GYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTK 488

Query: 233 KRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
           +                                       W ++ISG    G   +A+ +
Sbjct: 489 RN-----------------------------------AASWNSLISGFVQSGQKDKALQI 513

Query: 293 FLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI-EPTIQHFGCVVDLL 351
           F  M+ C++ P+  T+ ++L  C N    ++   +     +R  + E ++ +   ++D  
Sbjct: 514 FRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNL--LIDSY 571

Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSY 410
           A++G L  +++  N +  K DAV W +++ +  +H  +E A  L  Q  + G+  + G++
Sbjct: 572 AKSGNLMYSKNIFNELSWK-DAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTF 630

Query: 411 ILASNVYASVGKWSNKAEVRELMNKKGLIK 440
                 Y   G       V   + K  L++
Sbjct: 631 ASILLAYGHAGMVDEGKSVFSCITKDYLVR 660



 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 156/393 (39%), Gaps = 83/393 (21%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           +LH++I   G   N  P   +KL +  A    G L  AR +       N + ++ M+   
Sbjct: 104 ELHSRI---GLVENVNPFVETKLVSMYA--KCGLLGMARKVFNEMSVRNLFTWSAMIGGC 158

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           S +         + LF  M+R    GV  PD F  P VL+ C + +    G+ +H  + +
Sbjct: 159 SRNKSWGE---VVGLFYAMMR---DGV-LPDEFLLPKVLQACGKCRDLETGRLIHSMVIR 211

Query: 131 MGFGSDCYIMNALIHMYS----------VF---------------------GDLGVAREL 159
            G     ++ N+++ +Y+          +F                     G++G A++ 
Sbjct: 212 RGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKY 271

Query: 160 FDRMPDR---------------------------------------DVVSWTSLIDGLVD 180
           FD M                                          DV +WTS+I G   
Sbjct: 272 FDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQ 331

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
             R   A++L   M  AGVE N+ T+ S   ACA   +LSMG ++H I  +   ++    
Sbjct: 332 KGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVD-NVL 390

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           V  +LIDMY K G +++A              W ++I G    G C +A +LF++M+  +
Sbjct: 391 VGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESD 450

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
             P+  T   +++    +    +A  +F  ++K
Sbjct: 451 SPPNIITWNIMITGYMQSGAEDQALDLFKSIEK 483



 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 34/217 (15%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++ T   +L  CA L  +++ K++H F  +    S+  + N LI  Y+  G+L  ++ +
Sbjct: 524 PNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNI 583

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+ +  +D VSW S++   V H     A++LF +M + G++ N  T  S+L A   +G +
Sbjct: 584 FNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMV 643

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G+ V   + +               D   + G                   ++AM+  
Sbjct: 644 DEGKSVFSCITK---------------DYLVRQG----------------MEHYSAMVYL 672

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR 316
           L   G   EA+D    M    ++P+     A+L+ACR
Sbjct: 673 LGRSGKLAEALDFIQSMP---IEPNSSVWGALLTACR 706



 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 10/225 (4%)

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVH---GIVKEKKRIECKCNVS 242
           EA+ +   + E G  V   T +++L++C D   + +G+++H   G+V+          V 
Sbjct: 66  EAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRIGLVENVNPF-----VE 120

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           T L+ MYAK G +  A              W+AMI G + +    E + LF  M    V 
Sbjct: 121 TKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVL 180

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PDE  +  VL AC     +    ++ S M  R G+  +      ++ + A+ G +  A+ 
Sbjct: 181 PDEFLLPKVLQACGKCRDLETGRLIHS-MVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKK 239

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
             + M  + D+V W  +I     + +  +A++      + GV+ S
Sbjct: 240 IFDCMDER-DSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPS 283


>Medtr2g026210.1 | PPR containing plant-like protein | HC |
           chr2:9478558-9480181 | 20130731
          Length = 467

 Score =  221 bits (564), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 194/367 (52%), Gaps = 1/367 (0%)

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           T+  +L+ C   K   +G+++H  +  +G+  + Y+   L+ +Y+  G L  A+ LF+ +
Sbjct: 56  TYSLMLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNL 115

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
            ++D  +W ++I G V        +E F  M +A +  +  T  SV RACA    L  GR
Sbjct: 116 VEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGR 175

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
           + HG++  K +I     V++ALIDMY K  CI                 WT +ISG   H
Sbjct: 176 QAHGVML-KCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKH 234

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G   E +D F  M + + +P+  T  AVL AC +  L+ EAY  F  M + Y + P  +H
Sbjct: 235 GQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKH 294

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +  +VDLL R+G LKEA +F+   P K  +V+W  L+ ACK+H D +  +   K++ E  
Sbjct: 295 YAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACKIHGDLDLLKIASKKYFEFE 354

Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
             ++G Y++ +N YAS G W +  EVR  + + G+ K PG SRIEV   +  F  GD  H
Sbjct: 355 RVNTGKYVVLANAYASSGLWDDVEEVRASLRESGVTKEPGYSRIEVQKEVSFFFNGDKYH 414

Query: 464 PEADNIF 470
            +AD ++
Sbjct: 415 RQADEVY 421



 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 15/294 (5%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           ++HA ++ +G      P  + K+      + SG L  A+ L  +    +S+ +N M+  Y
Sbjct: 75  RIHAHMIIVGY----VPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGY 130

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
                       + L  F   R       PD +TF  V + CA L L   G+Q HG + K
Sbjct: 131 VQKG-----LEEVGLETFYEMR--QASLRPDQYTFASVFRACATLALLEPGRQAHGVMLK 183

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
              G +  + +ALI MY     +   R LFD+   R+ ++WT+LI G   H + VE ++ 
Sbjct: 184 CQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDS 243

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F RM+      N  T ++VL AC+  G +    K    +     +        A++D+  
Sbjct: 244 FHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKHYAAMVDLLG 303

Query: 251 KSGCIESAXXXXXXX-XXXXXXXWTAMISGLASHG---LCKEAIDLFLEMETCN 300
           +SG ++ A               W A++     HG   L K A   + E E  N
Sbjct: 304 RSGKLKEAYEFVLKSPYKEHSVIWGALLGACKIHGDLDLLKIASKKYFEFERVN 357


>Medtr4g098940.1 | PPR containing plant-like protein | HC |
           chr4:40871758-40869320 | 20130731
          Length = 575

 Score =  220 bits (561), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 163/550 (29%), Positives = 250/550 (45%), Gaps = 112/550 (20%)

Query: 1   MEVTTMSEAL-QLHAQIL--KLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPA 57
           +E TT ++   Q+H Q++   L      +     KL +    +PS  L +  L    +P 
Sbjct: 27  LESTTGTQHFNQIHTQLIINNLIQHPLLSTTAIKKLSSHPRTTPSSALFFDHL---HHP- 82

Query: 58  LNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFP----------- 106
            +++  NT++R+Y  SS+P+  FH      +  R     VP P+++TFP           
Sbjct: 83  -DAFLCNTIIRSYLRSSNPSAAFH-----FYYHRMIAKSVP-PNHYTFPLILKLCVDHGC 135

Query: 107 --------------------FVLKCCAR--------------------LKLARQGKQLHG 126
                               FV     R                    L L      + G
Sbjct: 136 KLEGEKGHARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDG 195

Query: 127 FITKMG-----------FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI 175
           ++   G           +  D +  N +I  Y   GDL  A+ELF+ MP++DVVSW  +I
Sbjct: 196 YVKNGGIRDARKLFDEMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMI 255

Query: 176 DGLV-------------DHDRPV---------------------EAIELFGRMLEAGVEV 201
           DG V               D  V                     E + +F RM+E+G  +
Sbjct: 256 DGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAM 315

Query: 202 -NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
            N+AT+VSVL ACA+ G L++G  VH  +K  + I+    + T L+ MYAK G ++ A  
Sbjct: 316 PNEATLVSVLTACANLGKLNLGLWVHSYIKSNE-IKLDVLLETCLLTMYAKCGAMDLASD 374

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W +MI G   HG   +A+++F EME    KP+E T   VLSAC +A +
Sbjct: 375 VFVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGM 434

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           V E +  F  M++ Y IEP ++H+GC+VDLLARAG +K +E+ +  + +K  + +W  L+
Sbjct: 435 VMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALL 494

Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
             C+ H D E AE + K+ +E+   D   YIL S+VYA+ G+W +   VR  M   GL K
Sbjct: 495 SGCRTHLDLELAENVAKRLVELEPQDISPYILLSDVYAAQGRWDDVERVRLAMKINGLQK 554

Query: 441 PPGSSRIEVD 450
              SS + ++
Sbjct: 555 EAASSLVHLE 564


>Medtr5g018370.1 | PPR containing plant-like protein | HC |
           chr5:6845861-6848150 | 20130731
          Length = 714

 Score =  220 bits (561), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 222/438 (50%), Gaps = 13/438 (2%)

Query: 42  SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
           +GD   A ++ +     +   +N+M+  Y  + D      A++LF+   +      P PD
Sbjct: 263 AGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEK---AMNLFV---QLKALCFPKPD 316

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
           ++T+  ++           GK LHG + K GF    ++ + L+ MY    +   A  +F 
Sbjct: 317 DYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFC 376

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
            +P +D + WT +I G       + AI  F  M     E++D  +  VL  CA    L  
Sbjct: 377 SIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQ 436

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
           G  +H     K   + + +VS +LIDMYAK+G +E+A              W +M+ G +
Sbjct: 437 GEIIH-CYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFS 495

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
            HG+  +A+ LF E+    + PD+ T  ++LSAC ++ LV +  ++++ M    G+ P  
Sbjct: 496 HHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSS-IGLVPGP 554

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV-LWRTLIWACKVHEDTERAERLMKQHL 400
           +H+ C+V LL+RA  L+EAE+ +N  P   D V LWRTL+ AC ++++ +   R  ++ L
Sbjct: 555 KHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVL 614

Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLI--KPPGSSRIEVDGALHEFVM 458
               +D  + IL SN+YA+ G+W   AE+R   N KGLI  K PG S IE    +H F  
Sbjct: 615 RFNAEDGPTLILLSNLYAAAGRWDEVAEIRR--NMKGLIMEKEPGLSWIEAKNDIHVFSS 672

Query: 459 GDYNHPEADNIFVKLDEM 476
           GD +HP+ D +  +L  +
Sbjct: 673 GDQSHPKVDQVQAELHRL 690



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 12/315 (3%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFT--FAALSPSGDLNYARLLLTSNPALNS 60
            T++ EA QLHA +L   T+ N +    + L+    +  S  G L  A  +    P    
Sbjct: 21  TTSLQEARQLHALLL---TTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMPQRTH 77

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
             YN +L AYS  S+  H  +A +L+  M          P N T   +L+  +       
Sbjct: 78  VSYNALLAAYSRVSE-QHCVYAFNLYTQMENMGLR----PSNMTITSLLQAASLHGDLLI 132

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           G  LH    K GF +D  +  +L++MYS   DL  A  +F  M +RD V+W SLI G + 
Sbjct: 133 GLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLK 192

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
           +D+  + + LF  M+  G      T   +L AC+       GR +H  V     +    +
Sbjct: 193 NDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVI-VGNVSPDLH 251

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-C 299
           +  AL+DMY  +G  ++A              W +MISG   +   ++A++LF++++  C
Sbjct: 252 LQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALC 311

Query: 300 NVKPDERTMTAVLSA 314
             KPD+ T   ++SA
Sbjct: 312 FPKPDDYTYAGIISA 326



 Score =  109 bits (273), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 177/398 (44%), Gaps = 17/398 (4%)

Query: 9   ALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLR 68
            L LHA+ LK G  N D     S L  +   S   DL+ A  +       ++  +N+++ 
Sbjct: 133 GLLLHAKSLKFGFLN-DICVQTSLLNMY---SSCMDLSSAESVFCDMNERDNVAWNSLIL 188

Query: 69  AYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI 128
            Y L +D       + LFI M+         P  +TF  +L  C+RLK    G+ +H  +
Sbjct: 189 GY-LKNDKIEK--GVYLFIEMMWVGF----TPTVYTFCMILSACSRLKDYFSGRLIHARV 241

Query: 129 TKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAI 188
                  D ++ NAL+ MY   GD   A  +F RM   D+VSW S+I G  +++   +A+
Sbjct: 242 IVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAM 301

Query: 189 ELFGRMLEAGV-EVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
            LF ++      + +D T   ++ A       S G+ +HG V +   +     V + L+ 
Sbjct: 302 NLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVR-SVFVGSTLVS 360

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY K+   E+A              WT MI+G +       AI  F EM     + D+  
Sbjct: 361 MYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYV 420

Query: 308 MTAVLSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           ++ VLS C    ++R+  ++     K  Y +E ++   G ++D+ A+ G L EA   + +
Sbjct: 421 LSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVS--GSLIDMYAKNGNL-EAAYLVFS 477

Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
               PD   W +++     H   + A +L ++ ++ G+
Sbjct: 478 QVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGL 515


>Medtr3g098230.1 | PPR containing plant-like protein | HC |
           chr3:44828973-44831769 | 20130731
          Length = 873

 Score =  220 bits (561), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 258/516 (50%), Gaps = 47/516 (9%)

Query: 2   EVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSY 61
           ++  +    Q+HA IL+      D     + L +F A     +  Y    + S   L S+
Sbjct: 366 QLDNLQAGKQVHAYILRHPFLFEDTSAG-NALVSFYAKCGYIEEAYHTFSMISRKDLISW 424

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
             N++L A+    +  HH   LSL   ML+        PD+ T   ++  CA L   ++ 
Sbjct: 425 --NSILDAFG---EKRHHSRFLSLLHVMLKLDIR----PDSVTILTIIHFCASLLRVKKV 475

Query: 122 KQLHGFITKMG---FGSDCYIMNALIHMYSVFGDLGVARELFDRMPD-RDVVSWTSLIDG 177
           K++HG+  + G     +   + NA++  YS  G++  A ++F  + + R++V+  SLI G
Sbjct: 476 KEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISG 535

Query: 178 LV-------------------------------DHDRPVEAIELFGRMLEAGVEVNDATV 206
            V                               ++D P +A+ELF ++   G++ +  T+
Sbjct: 536 YVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTI 595

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
           +S++  C    ++ + R+ HG +      +   ++   L+D YAK G I  A        
Sbjct: 596 MSLIPVCTQMASVHLLRQCHGYIIRSSFEDL--HLKGTLLDAYAKCGIIGYAYKIFQSSV 653

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                 +TAMI G A HG+ ++A++ F  M    +KPD    T++LSAC +A  + E   
Sbjct: 654 DKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLK 713

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           +F  ++K +G++PTI+ F CVVDLLAR G + EA  F+  +P++ +A +W TL+ ACK +
Sbjct: 714 IFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTY 773

Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
            + E    +  +  ++  +D G+YI+ SN+YA+  +W    EVR++M  K L KP G S 
Sbjct: 774 HEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSW 833

Query: 447 IEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKK 482
           IEV+   + FV+GD +HP+ + I+  L  +  ++K+
Sbjct: 834 IEVERTNNIFVVGDCSHPQRNLIYSTLCTLDQQVKE 869



 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 147/317 (46%), Gaps = 13/317 (4%)

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           SL  D  H+  ALS F   L+        PD+     +LK C+ L  +  GK LH ++ K
Sbjct: 15  SLCVDSRHN-EALSFFHHCLKDS--AAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVK 71

Query: 131 MGFGSDCYIMN-ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR-PVEAI 188
            G  S C++ + AL++MY+  G L    +LFD+    D V W  ++ G     +   + +
Sbjct: 72  QGHVS-CHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVM 130

Query: 189 ELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           ++F  M  +G V  +  T+ +VL  CA SG L+ G+ VHG V  K   E       AL+ 
Sbjct: 131 KVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVI-KSGFEMDTFAGNALVS 189

Query: 248 MYAKSGCIE-SAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
           MYAK G +   A              W AMI+GLA +GL KEA  LF  M   +VKP+  
Sbjct: 190 MYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYA 249

Query: 307 TMTAVLSACRNAD---LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           T+  +L  C + D     R    + S + +   +   +     ++    + G  KEAE  
Sbjct: 250 TVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESL 309

Query: 364 MNAMPMKPDAVLWRTLI 380
             AM  + D V W T+I
Sbjct: 310 FWAMDAR-DLVSWNTII 325



 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 11/246 (4%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLK---LARQGKQLHGFITKMG-FGSDC 137
           A SLF  M++    G   P+  T   +L  CA        R G+Q+H ++ +     +D 
Sbjct: 232 AFSLFSLMMK----GSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADV 287

Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
            + NAL+  Y   G    A  LF  M  RD+VSW ++I G   +   ++++ +FG ++  
Sbjct: 288 SVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSL 347

Query: 198 GVEVNDA-TVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIE 256
            + + D+ T+VS+L ACA    L  G++VH  +     +    +   AL+  YAK G IE
Sbjct: 348 EMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIE 407

Query: 257 SAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR 316
            A              W +++            + L   M   +++PD  T+  ++  C 
Sbjct: 408 EAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFC- 466

Query: 317 NADLVR 322
            A L+R
Sbjct: 467 -ASLLR 471



 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/319 (21%), Positives = 129/319 (40%), Gaps = 12/319 (3%)

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLE--AGVEVNDATVVSVLRACADSGALS 220
           M  R+ ++W S I  L    R  EA+  F   L+  A  + +   + ++L++C+   A +
Sbjct: 1   MLQRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASN 60

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
           +G+ +H  V ++  + C    S AL++MYAK G ++                W  ++SG 
Sbjct: 61  LGKCLHSYVVKQGHVSCHVT-SKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGY 119

Query: 281 ASHGLC-KEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
           +  G    + + +F  M +   V P   T+  VL  C  +  +     V   + K  G E
Sbjct: 120 SRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKS-GFE 178

Query: 339 PTIQHFGCVVDLLARAGCLK-EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
                   +V + A+ G +  +A    +++  K D V W  +I    + E+    E    
Sbjct: 179 MDTFAGNALVSMYAKCGLVACDAYAVFDSIIHK-DVVSWNAMI--AGLAENGLLKEAFSL 235

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVR--ELMNKKGLIKPPGSSRIEVDGALHE 455
             L M      +Y   +N+      +      R    ++   L  P  S+ + V  AL  
Sbjct: 236 FSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLS 295

Query: 456 FVMGDYNHPEADNIFVKLD 474
           F +      EA+++F  +D
Sbjct: 296 FYLKVGRTKEAESLFWAMD 314


>Medtr5g043450.1 | PPR containing plant-like protein | HC |
           chr5:19108134-19105482 | 20130731
          Length = 828

 Score =  219 bits (558), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 195/366 (53%), Gaps = 6/366 (1%)

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           G+Q+HG + K GF  D ++ N+L+ MYS  G    A  +F+++  + +V+W  +I G   
Sbjct: 425 GQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQ 483

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG--IVKEKKRIECK 238
           +   VEA+ LF  M +  +E+N  T +S ++AC++ G L  G+ +H   IV   +     
Sbjct: 484 NGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQN---D 540

Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
             + TAL+DMYAK G +++A              W+ MI+    HG    A  LF +M  
Sbjct: 541 LYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVL 600

Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
            N+KP+E T   +LSACR+A  V+E    F+ M+  YGI P ++HF  +VDLL+RAG + 
Sbjct: 601 SNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDIN 660

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA 418
            A + + ++     A +W  L+  C+++   +  E + ++   +  DD+G Y L SN+YA
Sbjct: 661 GAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYA 720

Query: 419 SVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVD 478
             G W    +VR  M   GL K PG S +E+D  ++ F  GD +  +   I + L+    
Sbjct: 721 EGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQMKEICMFLENFQS 780

Query: 479 KLKKEG 484
             +++G
Sbjct: 781 LAQEQG 786



 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 185/382 (48%), Gaps = 20/382 (5%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYY 63
           +T+    QLHA ++     NN  P   +KL    + S  G L  +RL+  ++P+ +S+ +
Sbjct: 12  STLRRLTQLHAHLVVTSLHNN--PLASTKLL--ESYSQMGSLQSSRLVFYTHPSPDSFMF 67

Query: 64  NTMLRAYSLSSDPTHHF-HALSLF---IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
           + +++ +  +    H F   LSLF   I M  + T        F +P V++    +    
Sbjct: 68  SVLIKCHLWN----HLFREVLSLFNHHIQMGSKLTQNCA----FLYPSVIRAVTGVGELI 119

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
            G++LHG I K GF  D  I  +L+ MY     L  A+++FD M  RD+V W+S+I   V
Sbjct: 120 VGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYV 179

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
           ++    E +E+F  M+  G+  +   ++SV  AC   G L + + VHG V  +  +    
Sbjct: 180 ENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVG-DG 238

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
           ++S +LI MY++ G +  A              WT+MIS    +   +EA+D+F++M+  
Sbjct: 239 SLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDS 298

Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFG-CVVDLLARAGCLK 358
            V+P++ TM +VL++C     ++E   V      R  +  T    G  ++D  +    + 
Sbjct: 299 EVEPNDVTMISVLNSCARLGRLKEGKSVHC-FVLRNAMGVTGLDLGPALIDFYSACWKMS 357

Query: 359 EAEDFMNAMPMKPDAVLWRTLI 380
             E  ++++    + V W TLI
Sbjct: 358 SCEKLLHSIG-NENIVSWNTLI 378



 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 150/332 (45%), Gaps = 13/332 (3%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD+     V + C ++   R  K +HG++ + G   D  + N+LI MYS  G L  A+ L
Sbjct: 201 PDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRL 260

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+ + DR    WTS+I     ++   EA+++F +M ++ VE ND T++SVL +CA  G L
Sbjct: 261 FECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRL 320

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G+ VH  V          ++  ALID Y+    + S               W  +IS 
Sbjct: 321 KEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISF 380

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
            A  GL  EA+  F  M    + PD  ++ + +SA  ++  ++    +   + KR   + 
Sbjct: 381 YAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDE 440

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL---- 395
            +Q+   ++D+ ++ G    A    N +  K   V W  +I  C   ++    E L    
Sbjct: 441 FVQN--SLMDMYSKCGFASSAYTIFNKIKHKS-IVAWNCMI--CGFSQNGISVEALSLFD 495

Query: 396 --MKQHLEMGVDDSGSYILA-SNV-YASVGKW 423
              K  LE+      S I A SN+ Y   GKW
Sbjct: 496 EMFKNRLEINKVTFLSAIQACSNLGYLDKGKW 527


>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:452191-449631 | 20130731
          Length = 827

 Score =  219 bits (557), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 207/417 (49%), Gaps = 37/417 (8%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD+FT   +L   A +   RQGK++H      G  S+ ++  AL+ MY    D+  A+  
Sbjct: 404 PDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMA 463

Query: 160 FDRMPDRD-----------------------------------VVSWTSLIDGLVDHDRP 184
           FD + +RD                                   V +W S++ GLV++ + 
Sbjct: 464 FDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQY 523

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
             A++LF  M  + +  +  TV  +L AC+    +  G++VH     +   +   ++   
Sbjct: 524 DLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHA-YSIRAGYDSDAHIGAT 582

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           L+DMYAK G I+                  AM++  A HG  +E I +F  M    V+PD
Sbjct: 583 LVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPD 642

Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
             T  +VLS+C +A  ++  Y  F  M+  Y I PT++H+ C+VDLL+RAG L EA   +
Sbjct: 643 HVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPTLKHYTCMVDLLSRAGKLDEAYQLI 701

Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
             MPM+ D+V W  L+  C +H++    E   ++ +E+   ++G+Y+L +N+YAS G+W 
Sbjct: 702 KNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWH 761

Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
           + A+ RELMN KG+ K PG S IE    +H F+  D +H   + I+  LD +   ++
Sbjct: 762 DLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIR 818



 Score =  123 bits (308), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 176/413 (42%), Gaps = 83/413 (20%)

Query: 27  PRNFSKLFTFAALSPSGDLNYARLLLTSNP----------ALNSYYYN------TMLRAY 70
           P NFS L T     P     Y+ +L +SN           ++ + +YN       +L+ Y
Sbjct: 21  PPNFSLLHT----PPLTSTTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMY 76

Query: 71  SLSS---DPTHHFHALSL----------------------FIFMLRRPTHGVPAP-DNFT 104
           S++S   D  H F  ++L                      F+        G+    D F 
Sbjct: 77  SINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFV 136

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
           FP VL  C  L     G+Q+HG + K GF ++ Y+ NALI MY   G L  A+++ + M 
Sbjct: 137 FPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMT 196

Query: 165 DRD-----------------------------------VVSWTSLIDGLVDHDRPVEAIE 189
            +D                                   VV+W+++I G   +   VE++E
Sbjct: 197 QKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVE 256

Query: 190 LFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMY 249
           LF RM+ AGV  +  T+ SVL AC+    L +G+++HG +  +  +     V+ AL+ MY
Sbjct: 257 LFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIV-RHELFSNGFVANALVGMY 315

Query: 250 AKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMT 309
            + G ++SA              +  MI G   +G   +A +LF +ME   V+ D  +  
Sbjct: 316 RRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWN 375

Query: 310 AVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
            ++S   +  +  +A M+F D+    GIEP     G ++   A   C+++ ++
Sbjct: 376 CMISGHVDNFMFDDALMLFRDLLME-GIEPDSFTLGSILTGFADMTCIRQGKE 427



 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 154/373 (41%), Gaps = 73/373 (19%)

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMY-------SVF- 150
           APD  T   VL  C+R+K    GK+LHG+I +    S+ ++ NAL+ MY       S F 
Sbjct: 267 APDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFK 326

Query: 151 -----------------------GDLGVARELFDRMP----DRDVVSWTSLIDGLVDHDR 183
                                  G++G A+ELF +M     +RD +SW  +I G VD+  
Sbjct: 327 IFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFM 386

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
             +A+ LF  +L  G+E +  T+ S+L   AD   +  G+++H I   K  ++    V  
Sbjct: 387 FDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKG-LQSNSFVGG 445

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS--------------------- 282
           AL++MY K   I +A              W A+ISG A                      
Sbjct: 446 ALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEP 505

Query: 283 ---------HGLCKE-----AIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVF 328
                     GL +      A+ LF EM+  +++PD  T+  +L+AC     +     V 
Sbjct: 506 NVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVH 565

Query: 329 SDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHED 388
           +    R G +        +VD+ A+ G +K      N +   P+ V    ++ A  +H  
Sbjct: 566 A-YSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS-NPNLVCHNAMLTAYAMHGH 623

Query: 389 TERAERLMKQHLE 401
            E    + ++ L+
Sbjct: 624 GEEGIVIFRRMLD 636


>Medtr3g101700.1 | PPR containing plant-like protein | HC |
           chr3:46826943-46824374 | 20130731
          Length = 729

 Score =  219 bits (557), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 218/451 (48%), Gaps = 30/451 (6%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
            +H  ++K G +N DA    S +  +A     G  N A+ L    P  +      ++ +Y
Sbjct: 273 NVHCYVVKCGFTN-DASVVTSLVCLYA---KQGFTNTAKQLYKYYPTKDLITLTAIISSY 328

Query: 71  SLSSDPTHHFHALSLFIFMLRRP--------THGVPAPDNFTFPFVLKCCARLKLARQGK 122
           S   D           I +  +P         HG+  P +F                 G 
Sbjct: 329 SEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAI---------------GC 373

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
             HG+  K G  +DC + N LI +YS F ++  A  LF  M ++ +++W S+I G V   
Sbjct: 374 TFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAG 433

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNV 241
           +  +A+ELF  M   G + +  T+ S+L  C   G L +G  +H  I++   R+E    +
Sbjct: 434 KSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDF--I 491

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
            TALIDMY+K G ++ A              W A+ISG + +GL   A   + +++   +
Sbjct: 492 GTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGL 551

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KPD+ T   VL+AC +  LV      F+ M K YG+ P++QH+ C+V LL + G  KEA 
Sbjct: 552 KPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAI 611

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           +F+N M ++PD+ +W  L+ AC +  + +  E L K+   +   + G Y+L SN+YA VG
Sbjct: 612 EFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVG 671

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGA 452
           +W + A VRE+M   G     G S I+V  A
Sbjct: 672 RWDDVARVREMMKDSGGDGCSGVSVIDVISA 702



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 167/397 (42%), Gaps = 79/397 (19%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N ++  YS +    + +HA+ LF+ MLR        P+  T   +L  C   +L  QG+
Sbjct: 125 WNVLICGYSQNG---YLYHAIQLFVDMLRENFK----PNQTTIVSLLPSCGCFELIFQGR 177

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI-----DG 177
            +HGF  K GFG D ++ NAL+ MY+   DL  ++ LFD M ++ VVSW ++I     +G
Sbjct: 178 SIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNG 237

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
           L D     +AI  F  ML+ G   +  T+++++ A A          VH  V  K     
Sbjct: 238 LFD-----KAILYFKEMLKEGFHPSSVTIMNLVSANA------FPENVHCYVV-KCGFTN 285

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
             +V T+L+ +YAK G   +A               TA+IS  +  G  + A++ F++  
Sbjct: 286 DASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTI 345

Query: 298 TCNVKPDERTMTAVLSACRNA-----------------------------------DLVR 322
             ++KPD   +  VL    N                                    D + 
Sbjct: 346 QLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIE 405

Query: 323 EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM---KPDAVLWRTL 379
            A  +F DM+++  I       GCV     +AG   +A +  + M M   KPDA+   +L
Sbjct: 406 AALSLFYDMREKPLITWNSMISGCV-----QAGKSSDAMELFSEMSMCGKKPDAITIASL 460

Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNV 416
           +  C    +    E L             SYIL +NV
Sbjct: 461 LSGCCQLGNLRIGETLH------------SYILRNNV 485



 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 135/333 (40%), Gaps = 19/333 (5%)

Query: 81  HALSLFIFMLRRPTHGVPAPDNFTFPFVLKC---------CARLKLARQGKQLHGFITKM 131
           +A S  + + R+       P+ FTF  ++K          C     A Q +Q+     K 
Sbjct: 27  NATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTA-ALQARQIQTQCLKR 85

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
           G     ++  +LI +Y   G    AR +FD+M  RDVVSW  LI G   +     AI+LF
Sbjct: 86  GVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLF 145

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
             ML    + N  T+VS+L +C     +  GR +HG    K       +++ AL+ MYAK
Sbjct: 146 VDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGF-GIKAGFGLDSHLNNALMSMYAK 204

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
              +E++              W  MI     +GL  +AI  F EM      P   T+  +
Sbjct: 205 CDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNL 264

Query: 312 LSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
           +SA    + V   Y+V      + G          +V L A+ G    A+      P K 
Sbjct: 265 VSANAFPENVH-CYVV------KCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTK- 316

Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
           D +    +I +     D E A     Q +++ +
Sbjct: 317 DLITLTAIISSYSEKGDIESAVECFIQTIQLDI 349



 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 5/260 (1%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           + +H ++ K GF +D  ++ +L+ +Y+  G    A++L+   P +D+++ T++I    + 
Sbjct: 272 ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEK 331

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
                A+E F + ++  ++ +   ++ VL    +    ++G   HG    K  +   C V
Sbjct: 332 GDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHG-YGVKSGLSNDCLV 390

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
           +  LI +Y++   IE+A              W +MISG    G   +A++LF EM  C  
Sbjct: 391 ANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGK 450

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
           KPD  T+ ++LS C     +R    + S  ++    +E  I     ++D+ ++ G L  A
Sbjct: 451 KPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGT--ALIDMYSKCGRLDYA 508

Query: 361 EDFMNAMPMKPDAVLWRTLI 380
           E     +   P    W  +I
Sbjct: 509 EKVFYNIK-DPCLATWNAII 527


>Medtr5g098860.1 | PPR containing plant-like protein | HC |
           chr5:43289378-43292142 | 20130731
          Length = 828

 Score =  218 bits (556), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 213/409 (52%), Gaps = 13/409 (3%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGF---GSDCYIMNALIHMYSVFGDLGVAR 157
           D+ T   +L   + L+    GKQ H ++ + G    G + Y    LI MY+  G +  A 
Sbjct: 425 DSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESY----LIDMYAKSGSIRTAE 480

Query: 158 ELFDR--MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
            LF++    DRD  +W ++I G   +    +AI L  +ML   V  N  T+ S+L AC+ 
Sbjct: 481 LLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSS 540

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTA 275
            G++ + R++HG    ++ +E    V T+L D Y+K G I  A              +T 
Sbjct: 541 MGSMGLARQLHGF-SIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTT 599

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
           M+     HG+ K A+ L+  M    ++PD  T  A+LSAC  + LV E   +F  M+K +
Sbjct: 600 MMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVH 659

Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV-LWRTLIWACKVHEDTERAER 394
            I+P+I+H+ CV D+L R G + EA +F+  +    + + +W +L+ +C+ H   E  + 
Sbjct: 660 KIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKA 719

Query: 395 LMKQHLEMGVDD--SGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGA 452
           + K+ L MG+D   +G ++L SN+YA  G+W     VR+ M +KGL K  G S +E+ G 
Sbjct: 720 VAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEIAGF 779

Query: 453 LHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEK 501
           ++ FV  D  HP++  I+  LD +   +K  GY P+ S  L  I D ++
Sbjct: 780 VNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKPQYSLNLNTILDSDE 828



 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 193/407 (47%), Gaps = 15/407 (3%)

Query: 39  LSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP 98
            S  G ++YAR++       N+  +NTM+ AY  ++ P     A+ +FI  L     GV 
Sbjct: 268 FSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVE---AIDVFIQALESE-EGVC 323

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
             D+ T   VL   ++L+  +  +Q H F+ K   GS   I+NA++ MYS    +  + +
Sbjct: 324 --DDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLK 381

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           +FD+M +RD VSW ++I   V +    EA+ L   M +    ++  T  ++L A ++   
Sbjct: 382 VFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRN 441

Query: 219 LSMGRKVHG-IVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXX--XXXXXXXXWTA 275
           L +G++ H  +++   + E    + + LIDMYAKSG I +A                W A
Sbjct: 442 LYVGKQTHAYLIRRGIQFE---GMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNA 498

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
           +I+G   +GL ++AI L  +M   NV P+  T+ ++L AC +   +  A  +     +R+
Sbjct: 499 IIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRF 558

Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
            +E  +     + D  ++ G +  AE+     P K ++V + T++     H   +RA  L
Sbjct: 559 -LEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEK-NSVTYTTMMMCYGQHGMGKRALTL 616

Query: 396 MKQHLEMGV-DDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
               L  G+  D+ +++   +     G      ++ E M K   IKP
Sbjct: 617 YDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKP 663



 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 190/437 (43%), Gaps = 50/437 (11%)

Query: 8   EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSP---SGDLNYARLLLT---SNPALNSY 61
           +AL L+A++    + +   P  FS      AL+    +G   ++  L +   +N   +  
Sbjct: 98  QALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRI 157

Query: 62  YYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPT-----------------HGVPA----- 99
            YN++L  Y+       H +AL++F  M RR                     V A     
Sbjct: 158 VYNSLLNMYA----SCQHEYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMI 213

Query: 100 -----PDNFTFPFVLKCCARLKLARQGKQLHGFITKMG--FGSDCYIMNALIHMYSVFGD 152
                P   TF  +    ++L  +R  K  +GF+ K G  + SD +++++ I M+S  G 
Sbjct: 214 NQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGC 273

Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV-NDATVVSVLR 211
           +  AR +FDR  +++   W ++I   V ++ PVEAI++F + LE+   V +D T++SVL 
Sbjct: 274 MDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLT 333

Query: 212 ACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXX 271
           A +    + +  + H  V  K        +  A++ MY++   ++++             
Sbjct: 334 AVSQLQQIKLAEQFHAFVI-KSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAV 392

Query: 272 XWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM 331
            W  +IS    +G  +EA+ L  EM+      D  T TA+LSA  N   +R  Y+     
Sbjct: 393 SWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASN---LRNLYV--GKQ 447

Query: 332 KKRYGIEPTIQHFGC---VVDLLARAGCLKEAE-DFMNAMPMKPDAVLWRTLIWACKVHE 387
              Y I   IQ  G    ++D+ A++G ++ AE  F        D   W  +I     + 
Sbjct: 448 THAYLIRRGIQFEGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNG 507

Query: 388 DTERAERLMKQHLEMGV 404
             E+A  L+KQ L   V
Sbjct: 508 LNEKAILLLKQMLVQNV 524



 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 156/356 (43%), Gaps = 20/356 (5%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
            + L   G  + A  LL S P  ++  +N+++  +  ++ P       +L ++   R   
Sbjct: 56  LSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQ-----ALLLYAKMRSNS 110

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFI----TKMGFGSDCYIMNALIHMYSVFG 151
                D +TF   LK CA  K    GK +H       +    G    + N+L++MY+   
Sbjct: 111 SCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQ 170

Query: 152 DLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLR 211
               A  +FD M  R+VV+W +LI   V  +R  +A+E F  M+   V  +  T V++  
Sbjct: 171 H-EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFP 229

Query: 212 ACADSGALSMGRKVHGIVKE--KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX 269
           A +  G     +  +G +++   + +     VS+A++ M++  GC++ A           
Sbjct: 230 ALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAIL-MFSDVGCMDYARMVFDRCLNKN 288

Query: 270 XXXWTAMISGLASHGLCKEAIDLFLE-METCNVKPDERTMTAVLSACRNADLVR--EAYM 326
              W  MI     +    EAID+F++ +E+     D+ T+ +VL+A      ++  E + 
Sbjct: 289 TEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFH 348

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
            F  +K   G    I     V+ + +R   +  +    + M ++ DAV W T+I A
Sbjct: 349 AFV-IKSLPG--SLIIILNAVMVMYSRCNHVDTSLKVFDKM-LERDAVSWNTIISA 400



 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 14/166 (8%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P+  T   +L  C+ +      +QLHGF  +     + Y+  +L   YS  G +  A  +
Sbjct: 526 PNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENV 585

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F R P+++ V++T+++     H     A+ L+  ML +G+  +  T V++L AC  SG +
Sbjct: 586 FLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLV 645

Query: 220 SMG-------RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
             G        KVH I   K  IE  C V+    DM  + G +  A
Sbjct: 646 DEGLQIFESMEKVHKI---KPSIEHYCCVA----DMLGRVGRVVEA 684


>Medtr5g042450.1 | PPR containing plant-like protein | HC |
           chr5:18668534-18660865 | 20130731
          Length = 702

 Score =  218 bits (555), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 239/473 (50%), Gaps = 19/473 (4%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM--PD 165
           +++ C + +   + K +H ++ +            ++ MY   G +  A  +F  M   +
Sbjct: 245 LMQLCGKAEFLEEAKVVHIYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTE 304

Query: 166 RDVVSW--TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
           R ++    +S ++G V      EAI++   + +  + V+    + +++ C  + +L   +
Sbjct: 305 RKLIEELDSSCMEGEVK-----EAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEAK 359

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
            VH  V +      K +    +++MY + G ++ A                 MI  LA +
Sbjct: 360 VVHRYVLQHLS-PLKVSTCNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKN 418

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G  +++IDLF + +   +KPD +    V  AC     + E  + F  M + Y I PT++H
Sbjct: 419 GFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEH 478

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +  +VD++   G L EA +F+  MPM+P   +W TL+ +C+VH +TE  +R  +  L   
Sbjct: 479 YVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAE--LVEK 536

Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
           +D S       N  + VG      E  ++   K   KPP ++ +     +HE+  GD + 
Sbjct: 537 LDPS-----RLNEKSKVGLLL--IETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSL 589

Query: 464 PEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQ 523
           PE + I+V L  +  ++K+ GY  +    L ++D E+K   LL HSE+LA+A GL+ +  
Sbjct: 590 PENNMIYVLLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPA 649

Query: 524 GSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            S IR++KNLR C DCH  +K+IS +  R+ I+RD  RFHHFKNG CSC+DYW
Sbjct: 650 RSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702


>Medtr5g042450.2 | PPR containing plant-like protein | HC |
           chr5:18668534-18660865 | 20130731
          Length = 702

 Score =  218 bits (555), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 239/473 (50%), Gaps = 19/473 (4%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM--PD 165
           +++ C + +   + K +H ++ +            ++ MY   G +  A  +F  M   +
Sbjct: 245 LMQLCGKAEFLEEAKVVHIYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTE 304

Query: 166 RDVVSW--TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
           R ++    +S ++G V      EAI++   + +  + V+    + +++ C  + +L   +
Sbjct: 305 RKLIEELDSSCMEGEVK-----EAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEAK 359

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
            VH  V +      K +    +++MY + G ++ A                 MI  LA +
Sbjct: 360 VVHRYVLQHLS-PLKVSTCNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKN 418

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G  +++IDLF + +   +KPD +    V  AC     + E  + F  M + Y I PT++H
Sbjct: 419 GFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEH 478

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +  +VD++   G L EA +F+  MPM+P   +W TL+ +C+VH +TE  +R  +  L   
Sbjct: 479 YVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAE--LVEK 536

Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
           +D S       N  + VG      E  ++   K   KPP ++ +     +HE+  GD + 
Sbjct: 537 LDPS-----RLNEKSKVGLLL--IETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSL 589

Query: 464 PEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQ 523
           PE + I+V L  +  ++K+ GY  +    L ++D E+K   LL HSE+LA+A GL+ +  
Sbjct: 590 PENNMIYVLLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPA 649

Query: 524 GSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            S IR++KNLR C DCH  +K+IS +  R+ I+RD  RFHHFKNG CSC+DYW
Sbjct: 650 RSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702


>Medtr2g013500.1 | PPR containing plant-like protein | HC |
           chr2:3639056-3640975 | 20130731
          Length = 515

 Score =  217 bits (553), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 221/444 (49%), Gaps = 17/444 (3%)

Query: 7   SEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTM 66
           ++ L++HA+++K G   +   +N    F  +    S D+  A  +  S P+ +   + ++
Sbjct: 75  AKGLEIHARLIKSGHIFDGFIKNTLLYFYLS----SNDVVSATRVFKSIPSPDVVSWTSL 130

Query: 67  LRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHG 126
           +   S     T    A S               P+  T    +  C+ +   + GK +H 
Sbjct: 131 ISGLSKCGFETEAIEAFSSINV----------KPNALTLVSAISACSSIGAIKFGKAIHA 180

Query: 127 F-ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
           + +  +    +    NA + +Y+  G    AR +F +M  RDV+SWT+L+       +  
Sbjct: 181 YGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCG 240

Query: 186 EAIELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
           EA+E+F +M+ +G  E N++TVV+VL ACA  G+LS+G  VH  ++++  ++   N+  A
Sbjct: 241 EAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNA 300

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           L++MY K G ++                W  +I GLA +G  K+ + +F  M    V PD
Sbjct: 301 LVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPD 360

Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
           + T   +LSAC +  LV E  M F  M+  YGI P + H+GC+VD+  RA   +EA  F+
Sbjct: 361 DVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYGRASLFEEAVAFL 420

Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
             MP++ +  +W  L+ ACK H + E +E +  Q  +  V   G+  L SN+YAS  +W 
Sbjct: 421 KGMPVEAEGPIWSALLQACKTHGNEEMSEWIRGQIHDKNV-GVGTLALLSNIYASSERWD 479

Query: 425 NKAEVRELMNKKGLIKPPGSSRIE 448
           +   VR++M   GL K  G S +E
Sbjct: 480 DANNVRKIMRGTGLKKVAGLSWVE 503



 Score =  125 bits (315), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 141/305 (46%), Gaps = 5/305 (1%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           +++TF   LK C       +G ++H  + K G   D +I N L++ Y    D+  A  +F
Sbjct: 57  NHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVF 116

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
             +P  DVVSWTSLI GL       EAIE F  +    V+ N  T+VS + AC+  GA+ 
Sbjct: 117 KSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSI---NVKPNALTLVSAISACSSIGAIK 173

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G+ +H    +   I+       A +D+YAK G   +A              WT ++   
Sbjct: 174 FGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAY 233

Query: 281 ASHGLCKEAIDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
           A  G C EA+++F +M  +   +P+E T+  VLSAC +   +     V   ++KR  ++ 
Sbjct: 234 ARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDV 293

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
                  +V++  + G +K      N M +  D + W T+I    ++   ++  ++    
Sbjct: 294 DGNIGNALVNMYVKCGDMKMGLKVFN-MVVHKDVISWGTVICGLAMNGYGKQVVQMFSHM 352

Query: 400 LEMGV 404
           L  GV
Sbjct: 353 LVHGV 357



 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 7/259 (2%)

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
            HD       L  +ML      N  T    L+AC    A + G ++H  + +   I    
Sbjct: 35  SHDNVKAFFNLCNQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHI-FDG 93

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
            +   L+  Y  S  + SA              WT++ISGL+  G   EAI+ F    + 
Sbjct: 94  FIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAF---SSI 150

Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
           NVKP+  T+ + +SAC +   ++    + +   K   I+  I  +   +DL A+ G    
Sbjct: 151 NVKPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSN 210

Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG--VDDSGSYILASNVY 417
           A +    M  K D + W TL+ A         A  + KQ +  G    +  + +   +  
Sbjct: 211 ARNVFVKMS-KRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSAC 269

Query: 418 ASVGKWSNKAEVRELMNKK 436
           AS+G  S    V + + K+
Sbjct: 270 ASIGSLSLGCWVHDYIEKR 288


>Medtr6g066360.1 | PPR containing plant-like protein | HC |
           chr6:24701161-24699312 | 20130731
          Length = 563

 Score =  217 bits (552), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 219/442 (49%), Gaps = 12/442 (2%)

Query: 8   EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
           + + +H  ++KLG    +   + S +  +A     G ++ AR +           + T++
Sbjct: 133 QGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQF---GQMDEARKVFDFMDEKTIVSWTTIM 189

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
             Y           A+ LF        H     D   F  ++  C +L+       +H  
Sbjct: 190 GGYVKVGSSVE---AVKLF----NEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSL 242

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           + K G   +  I N L+ MY+  G+L  AR +FD +  + V+SWTS+I G     RP EA
Sbjct: 243 VLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEA 302

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           ++LF RM+   ++ N AT+ +VL ACAD G+L +G ++     E    E    V T+L+ 
Sbjct: 303 LDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENG-FETDLQVQTSLVH 361

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN-VKPDER 306
           MY+K G I  A              W++MI+    HG+  EAI LF +M T   +KPD  
Sbjct: 362 MYSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAI 421

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
             T++L AC ++ L+ +    F  M+  +GI PT +H+ C+VDLLAR G L  A D + A
Sbjct: 422 VYTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKEHYTCLVDLLARVGQLDLALDTIEA 481

Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNK 426
           MP    A     L+ AC++H + E  E +  + L++    S SY+  +N+Y SVGKW   
Sbjct: 482 MPTDVQAEALSPLLSACRIHGNIELGELVAAKLLDVSPKSSSSYVGVANLYNSVGKWKEA 541

Query: 427 AEVRELMNKKGLIKPPGSSRIE 448
             +R +++ KG++K  G S+++
Sbjct: 542 NTMRNMIDGKGMVKECGWSQVQ 563



 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 4/225 (1%)

Query: 95  HGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLG 154
           H     + FT+P + K CA L     G  LHG + ++GF +D ++  +L+ MYS    + 
Sbjct: 3   HSSVHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIE 62

Query: 155 VARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
            AR++FD MP+R VVSW SLI          +A+ L   ML  G + + +T VS+L   +
Sbjct: 63  SARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYS 122

Query: 215 DS----GALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
            +      L  G  +H  V +   +  + ++  +L+ MYA+ G ++ A            
Sbjct: 123 SNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTI 182

Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
             WT ++ G    G   EA+ LF EM+  N+  D      ++S C
Sbjct: 183 VSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGC 227


>Medtr4g108030.1 | PPR containing plant-like protein | HC |
           chr4:44776233-44777913 | 20130731
          Length = 544

 Score =  216 bits (551), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 171/313 (54%), Gaps = 6/313 (1%)

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
           N LI  Y   GD+  AR +F  MP+R+ VSW S+I G V       A+ELF  M  AGV+
Sbjct: 227 NTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 286

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKE-KKRIECKCNVSTALIDMYAKSGCIESAX 259
             + T++S+L ACA++GAL +G K++  +K  + +IE    +  AL++MY K G +  A 
Sbjct: 287 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESY--LGNALVNMYCKCGNLSLAW 344

Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC---NVKPDERTMTAVLSACR 316
                        W AM+ GLA HG C+E   LF EME     +++PD  T   VL AC 
Sbjct: 345 EIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACS 404

Query: 317 NADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLW 376
           +  LV +A   F  M KRY I P  +H+GC+VDLL R G L+EA   +   P +   VLW
Sbjct: 405 HKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLW 464

Query: 377 RTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKK 436
           RTL+ AC+   +TE AE   KQ  ++     G Y+L SN+YA  G+W     +R  M+  
Sbjct: 465 RTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYL 524

Query: 437 GLIKPPGSSRIEV 449
            + +  G S+I +
Sbjct: 525 HVPRQAGYSQINM 537


>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr2:21642144-21644166 | 20130731
          Length = 625

 Score =  216 bits (551), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/366 (34%), Positives = 203/366 (55%), Gaps = 8/366 (2%)

Query: 84  SLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNAL 143
           SL  F +     GV  PD +TF  +L  CA L L RQGK++HG +  +GFG +  + ++L
Sbjct: 240 SLKFFYVMNRVRGV-VPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSL 298

Query: 144 IHMYSVFGDLGVARELFDRMPD-RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
           + MY   G +  +R +F+R+ D ++ VSWT+++     +      ++L   + E G ++N
Sbjct: 299 LDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDL---VRERG-DLN 354

Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
                 VLRAC+   A++ G++VH +   K   +    + +AL+D+YAK G ++ A    
Sbjct: 355 FYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSK-DVIIESALVDLYAKCGMVDFACTMF 413

Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVR 322
                     W +M+SG A +G   EA+ LF +M    +KPD  T  AVL AC +A LV 
Sbjct: 414 ASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVD 473

Query: 323 EAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
           E   VF+ M + YGI+P ++H+ C++DLL RAG + EAE  +     + D  LW  L+ A
Sbjct: 474 EGRKVFTLMGE-YGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYDKSLWAALLGA 532

Query: 383 CKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPP 442
           C    D   AER+ ++ +E+  D   SY+L +N+Y  VG+W +  E+R+LM  +G+ K  
Sbjct: 533 CTKCSDYRTAERVARKMIELEPDFHLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKKMA 592

Query: 443 GSSRIE 448
           G S I+
Sbjct: 593 GKSWID 598



 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 163/354 (46%), Gaps = 15/354 (4%)

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFG---DLGVARELFD 161
           +  +L+   +      G  +H  + K G  SD ++ N+L+ +Y        L  AR LFD
Sbjct: 53  YASLLQTSVKTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFD 112

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
            +  +DV+SWTSLI G    D P ++I LF  ML   V+ N  T+ SV++AC+    +++
Sbjct: 113 SLHVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNL 172

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXX-WTAMISGL 280
           GR  H +V  +   +    VS +LIDMY  +  ++ A               WT++IS  
Sbjct: 173 GRCFHSMVLTRG-FDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCF 231

Query: 281 ASHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
             + + KE++  F  M     V PD  T   +L+AC N  L+R+   V   +    G   
Sbjct: 232 TRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVG-LGFGG 290

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            +     ++D+  + GC++ +      +  + + V W  ++     +++ +    L+++ 
Sbjct: 291 NVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRER 350

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGAL 453
            ++     G  + A +  A+V   ++  EV  +  +KG     GS  + ++ AL
Sbjct: 351 GDLNFYAFGIVLRACSGLAAV---NHGKEVHCMYVRKG-----GSKDVIIESAL 396



 Score =  108 bits (270), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 188/445 (42%), Gaps = 20/445 (4%)

Query: 1   MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
           ++  +      +HA +LK G  ++    N S L  +  L+P   L++AR L  S    + 
Sbjct: 61  VKTNSFHHGASVHAHVLKSGLHSDRFVGN-SLLTLYFKLNPGPHLSHARHLFDSLHVKDV 119

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
             + +++  Y+ S  P     ++SLF  ML  P      P+ FT   V+K C+ L     
Sbjct: 120 ISWTSLISGYTRSDLP---HQSISLFYEMLAFPVQ----PNAFTLSSVIKACSALNDVNL 172

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLV 179
           G+  H  +   GF  +  +  +LI MY     +  AR +FD +  + DV  WTS+I    
Sbjct: 173 GRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFT 232

Query: 180 DHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
            +D   E+++ F  M    GV  +  T  ++L ACA+ G L  G++VHG V         
Sbjct: 233 RNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLG-FGGN 291

Query: 239 CNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEME 297
             V ++L+DMY K GC+  S               WTAM+     +   +  +DL  E  
Sbjct: 292 VVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRERG 351

Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
             N          VL AC     V     V     ++ G +  I     +VDL A+ G +
Sbjct: 352 DLNF----YAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIE-SALVDLYAKCGMV 406

Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD-DSGSYILASNV 416
             A     +M ++ + + W +++     +     A  L +  ++ G+  DS +++     
Sbjct: 407 DFACTMFASMEVR-NLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFA 465

Query: 417 YASVGKWSNKAEVRELMNKKGLIKP 441
            +  G      +V  LM + G IKP
Sbjct: 466 CSHAGLVDEGRKVFTLMGEYG-IKP 489


>Medtr1g040705.1 | PPR containing plant-like protein | HC |
           chr1:15076249-15083015 | 20130731
          Length = 702

 Score =  216 bits (551), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 236/473 (49%), Gaps = 19/473 (4%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM--PD 165
           +++ C + +   + K +H ++ +            ++ MY   G +  A  +F  M   +
Sbjct: 245 LMQLCGKAEFLEEAKVVHRYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTE 304

Query: 166 RDVVSW--TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
           R ++    +S ++G V      EAI++   + +  + V+    + +++ C  + +L   +
Sbjct: 305 RKLIEELDSSCMEGEVK-----EAIDVLQVLEKFHIHVDLDRCLRLMQQCGKTKSLEEAK 359

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
            VH  V +      K +    +++MY + G ++ A                 MI  LA +
Sbjct: 360 VVHRYVLQHLS-PLKVSTCNGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKN 418

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G  +++IDLF + +   +KPD +    V  AC     + E  + F  M + Y I PT++H
Sbjct: 419 GFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMEH 478

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +  +VD++   G L EA +F+  MPM+P   +W TL+ +C+VH +TE  +R  +   ++ 
Sbjct: 479 YVSIVDMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKL- 537

Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
             D       S V   +       E  ++   K   KPP ++ +     +HE+  GD + 
Sbjct: 538 --DPSRLNEKSKVSLLL------IETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSL 589

Query: 464 PEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQ 523
           PE + I+  L  +  ++K+ GY  +    L ++D E+K   LL HSE+LA+A GL+ +  
Sbjct: 590 PENNMIYALLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPA 649

Query: 524 GSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            S IR++KNLR C DCH  +K+IS +  R+ I+RD  RFHHFKNG CSC+DYW
Sbjct: 650 RSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702


>Medtr1g073160.1 | PPR containing plant-like protein | HC |
           chr1:32444344-32441927 | 20130731
          Length = 627

 Score =  216 bits (550), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 220/429 (51%), Gaps = 10/429 (2%)

Query: 56  PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK-CCAR 114
           P  N   +N ++   +   +  +  +A  L+ F  R    G  A D FT   +L  CC  
Sbjct: 188 PQRNVGSFNVIISGCAALGNLDYSLYA-DLWNFFRRMQCQGYNA-DAFTVASLLPMCCDS 245

Query: 115 LKLARQGKQLHGFITKMGFG----SDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVS 170
                 G++LH ++ K G      SD ++ ++LI MYS    L ++R +FD+M  R++  
Sbjct: 246 DGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYV 305

Query: 171 WTSLIDGLVDHDRPVEAIELFGRMLEAG-VEVNDATVVSVLRACADSGALSMGRKVHGIV 229
           WT++I+G V +  P  A+ LF  M     +  N  ++VSVL AC     L  G++VH   
Sbjct: 306 WTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAF- 364

Query: 230 KEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLASHGLCKE 288
             K       ++  ALIDMYAK G ++ A               W+++IS    HG  +E
Sbjct: 365 SIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQE 424

Query: 289 AIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
           A+  + EM    +KPD  T+  VLSAC  + LV E   +++ +   Y ++P+++  GCVV
Sbjct: 425 ALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVV 484

Query: 349 DLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSG 408
           DLL R+G L +A DF+  MP+ P   +W +L+ A  +H ++   +   +  LE+  ++  
Sbjct: 485 DLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPS 544

Query: 409 SYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADN 468
           +YI  SN YAS  +W    EVR +M ++GL K PG S I +    H F + D  HP + +
Sbjct: 545 NYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSSS 604

Query: 469 IFVKLDEMV 477
           I+  LD++V
Sbjct: 605 IYEMLDDLV 613



 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 184/405 (45%), Gaps = 25/405 (6%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q H+QIL    +N  +   F      +A +  GD   ++L+  S    N Y +N+++  Y
Sbjct: 47  QCHSQIL----TNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGY 102

Query: 71  SLSSDPTHHF-HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
                  H F +A+ LF  M R        PD++T   + K    ++    GK +HG   
Sbjct: 103 V----KNHQFDNAIVLFRQMGR-----CLLPDDYTLATISKVSGEIQDLVLGKLIHGKSL 153

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL-----VDHDRP 184
           ++GF SD  + N+++ MY    + G A ++FD MP R+V S+  +I G      +D+   
Sbjct: 154 RIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLY 213

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADS-GALSMGRKVHG-IVKEKKRIECKCNV- 241
            +    F RM   G   +  TV S+L  C DS G    GR++H  +VK    ++   +V 
Sbjct: 214 ADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVH 273

Query: 242 -STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
             ++LIDMY++S  +  +              WTAMI+G   +G  + A+ LF EM+  +
Sbjct: 274 MGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKD 333

Query: 301 -VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
            ++P+  ++ +VL AC     +     V +    +      I     ++D+ A+ G L  
Sbjct: 334 RIRPNRVSLVSVLPACGLLVGLMGGKQVHA-FSIKMEFNDYISLRNALIDMYAKCGSLDY 392

Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
           A    +      DA+ W ++I A  +H   + A     + L+ G+
Sbjct: 393 ARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGI 437



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 11/205 (5%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           +Q H  I    F  + ++   LI  Y+ FGD  +++ +FD +  ++V  W SLI+G V +
Sbjct: 46  QQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKN 105

Query: 182 DRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN- 240
            +   AI LF R +   +  +D T+ ++ +   +   L +G+ +HG   +  RI    + 
Sbjct: 106 HQFDNAIVLF-RQMGRCLLPDDYTLATISKVSGEIQDLVLGKLIHG---KSLRIGFVSDI 161

Query: 241 -VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHG-----LCKEAIDLFL 294
            V  +++ MY +      A              +  +ISG A+ G     L  +  + F 
Sbjct: 162 VVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFR 221

Query: 295 EMETCNVKPDERTMTAVLSACRNAD 319
            M+      D  T+ ++L  C ++D
Sbjct: 222 RMQCQGYNADAFTVASLLPMCCDSD 246


>Medtr1g040705.3 | PPR containing plant-like protein | HC |
           chr1:15076249-15080305 | 20130731
          Length = 713

 Score =  216 bits (550), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 236/473 (49%), Gaps = 19/473 (4%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM--PD 165
           +++ C + +   + K +H ++ +            ++ MY   G +  A  +F  M   +
Sbjct: 256 LMQLCGKAEFLEEAKVVHRYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTE 315

Query: 166 RDVVSW--TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
           R ++    +S ++G V      EAI++   + +  + V+    + +++ C  + +L   +
Sbjct: 316 RKLIEELDSSCMEGEVK-----EAIDVLQVLEKFHIHVDLDRCLRLMQQCGKTKSLEEAK 370

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
            VH  V +      K +    +++MY + G ++ A                 MI  LA +
Sbjct: 371 VVHRYVLQHLS-PLKVSTCNGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKN 429

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G  +++IDLF + +   +KPD +    V  AC     + E  + F  M + Y I PT++H
Sbjct: 430 GFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMEH 489

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +  +VD++   G L EA +F+  MPM+P   +W TL+ +C+VH +TE  +R  +   ++ 
Sbjct: 490 YVSIVDMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKL- 548

Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
             D       S V   +       E  ++   K   KPP ++ +     +HE+  GD + 
Sbjct: 549 --DPSRLNEKSKVSLLL------IETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSL 600

Query: 464 PEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQ 523
           PE + I+  L  +  ++K+ GY  +    L ++D E+K   LL HSE+LA+A GL+ +  
Sbjct: 601 PENNMIYALLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPA 660

Query: 524 GSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            S IR++KNLR C DCH  +K+IS +  R+ I+RD  RFHHFKNG CSC+DYW
Sbjct: 661 RSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 713


>Medtr2g021850.1 | PPR containing plant-like protein | HC |
           chr2:7450705-7448544 | 20130731
          Length = 479

 Score =  216 bits (549), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 219/433 (50%), Gaps = 36/433 (8%)

Query: 152 DLGVARELFDRMPDRD-VVSWTSLIDGLVDH-------DRPVEAIELFGRMLEAGVEVND 203
           +LG    L++    RD + S  SL +G ++         +  EA+E   ++ +  + V+ 
Sbjct: 75  NLGGLYNLWESGSYRDKLASSGSLYNGTLEELDSFCRDGKVKEAVENLQKLEKLHIHVDL 134

Query: 204 ATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXX 263
              + ++R C  + +L   R VH    +        +    +++MY + G ++ A     
Sbjct: 135 QRCLQLMRICGKAKSLEEARVVHRHALQHLH-PLTVSTDNRVLEMYFECGSLDDAIDVFK 193

Query: 264 XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVRE 323
                    W  MI  L  +G  +++ID+F + +   +KPD +    V  AC     + E
Sbjct: 194 SMPEYDLTTWHTMIMQLVKNGFAEDSIDIFTQFKNMGLKPDGQMFIGVFGACSMLGDISE 253

Query: 324 AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
             + F  M K YGI PT+ H+  +V+++A  G L EA +F+  MPM+P+  +W+TL+ +C
Sbjct: 254 GMLHFESMSKDYGIVPTMAHYVSLVEMIASIGHLDEALEFIEKMPMEPNVEVWKTLMNSC 313

Query: 384 KVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPG 443
           +VH +TE  +   K  L +G                     N   +++    K  I P G
Sbjct: 314 RVHGNTELGDVKAKAGLLLG--------------------ENSDLIKKNEQNKLTINPKG 353

Query: 444 SSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKAT 503
            SR+      HEF  GD + P++D I+  L  + +++K++GY  +    L +ID+E K  
Sbjct: 354 QSRV------HEFRNGDTSDPKSDKIYTLLRGLREQMKEDGYIAETRYALHDIDEEGKED 407

Query: 504 QLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFH 563
            LL HSE+LA+A GL  +   S IR++KN R C DCH  +K+ISKI  R++I++ + R H
Sbjct: 408 VLLAHSERLAVAKGLFSSPARSTIRVIKNFRICPDCHTALKIISKIVGRELIIQAK-RCH 466

Query: 564 HFKNGDCSCKDYW 576
           HFKNG CSCKDY+
Sbjct: 467 HFKNGLCSCKDYF 479


>Medtr8g028890.1 | PPR containing plant-like protein | HC |
           chr8:11200768-11198782 | 20130731
          Length = 655

 Score =  214 bits (546), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 219/426 (51%), Gaps = 14/426 (3%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCA--RLKLARQ 120
           +N M+  Y  +S P   F    +F  M     +G    D FTF  +L   +   L+    
Sbjct: 236 WNVMVSCYVFNSLPEEAFR---VFNSMRLDVVNG----DEFTFSSLLSVISDDALEYYDF 288

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           GKQ+H  + +  F SD  + +ALI+MY+   ++  AR +FD M  R+VV+W ++I G  +
Sbjct: 289 GKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGN 348

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK-- 238
           H    E ++L   ML  G   ++ T+ S++ +C  + A++   +VH       ++ C+  
Sbjct: 349 HGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAV---KLSCQDF 405

Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
            +V+ +LI  Y+K G I SA              WT++I   A HGL +++ ++F +M +
Sbjct: 406 LSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLS 465

Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
             +KPD      VLSAC +  LV +    F  M   Y I P  +H+ C+VDLL R G + 
Sbjct: 466 YGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLIN 525

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA 418
           EA + + +MP++ D+      I +CK+H + E A+   ++   +  + S +Y + SN++A
Sbjct: 526 EAFEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFA 585

Query: 419 SVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVD 478
           S   W +   +R+ M  K   K PG S IE+   +H FV  D +HP A  ++V L+ ++ 
Sbjct: 586 SQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVTLNMLLR 645

Query: 479 KLKKEG 484
            +K++ 
Sbjct: 646 PMKEQN 651



 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 184/405 (45%), Gaps = 18/405 (4%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNT 65
           + E  QLHA ++K G     + +N   L  +     + D   A+ L    P  N   +N 
Sbjct: 76  LPEGKQLHAHLIKFGFCQVLSLQN-QILSVYLKCQEAED---AKKLFEELPVRNVVSWNI 131

Query: 66  MLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLH 125
           M+RA S+  +  +    + L     RR    +  PD+ TF  ++  C +      G QLH
Sbjct: 132 MIRA-SVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLH 190

Query: 126 GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV 185
            F  K+GF  DC++  AL+ +Y+  G +  AR +F  +  RD+V W  ++   V +  P 
Sbjct: 191 CFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPE 250

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGA--LSMGRKVHGIVKEKKRIECKCNVST 243
           EA  +F  M    V  ++ T  S+L   +D        G++VH +V  ++  +    V++
Sbjct: 251 EAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVL-RQSFDSDVLVAS 309

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           ALI+MYAKS  I  A              W  MI G  +HG   E + L  EM      P
Sbjct: 310 ALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLP 369

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL----ARAGCLKE 359
           DE T+++++S+C  A  + E   V +     + ++ + Q F  V + L    ++ G +  
Sbjct: 370 DELTISSIISSCGYASAITETLQVHA-----FAVKLSCQDFLSVANSLISAYSKCGSITS 424

Query: 360 AEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV 404
           A      +  +PD V W +LI+A   H   E++  + ++ L  G+
Sbjct: 425 AFKCFE-LTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGI 468



 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 152/352 (43%), Gaps = 32/352 (9%)

Query: 92  RPTHGVPAPDNFTFPFV--LKCCARLKLAR------QGKQLHGFITKMGFGSDCYIMNAL 143
           R +  +P   +F  P    L C   LK++       +GKQLH  + K GF     + N +
Sbjct: 42  RASMPIPNQTHFNDPNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQI 101

Query: 144 IHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA------IELFGRMLEA 197
           + +Y    +   A++LF+ +P R+VVSW  +I   V  +   E+         F RML  
Sbjct: 102 LSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLE 161

Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
            +  +  T   ++  C     + MG ++H     K   +  C V  AL+ +YAK G +E+
Sbjct: 162 MMVPDHITFNGLICLCTQFNDIEMGVQLHCFTV-KVGFDLDCFVGCALVGLYAKCGFVEN 220

Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
           A              W  M+S    + L +EA  +F  M    V  DE T +++LS    
Sbjct: 221 ARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLS---- 276

Query: 318 ADLVREAYMVFSDMKK-------RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
             ++ +  + + D  K       R   +  +     ++++ A++  + +A    + M ++
Sbjct: 277 --VISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIR 334

Query: 371 PDAVLWRTLIWACKVHEDTERAERLMKQHLEMGV---DDSGSYILASNVYAS 419
            + V W T+I     H D     +L+K+ L  G    + + S I++S  YAS
Sbjct: 335 -NVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYAS 385


>Medtr8g074780.1 | PPR containing plant-like protein | HC |
           chr8:31617312-31615266 | 20130731
          Length = 510

 Score =  214 bits (544), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 250/488 (51%), Gaps = 21/488 (4%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           T+    Q HAQI+ +G    D P   +KL    +     ++ +AR +       + + +N
Sbjct: 32  TIDRIKQTHAQII-IGGHKQD-PFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWN 89

Query: 65  TMLRAYS---LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQG 121
            +++ Y+     ++  H ++A+ L             AP+ +T+PFVLK C   +   +G
Sbjct: 90  NVIKGYANMGPFAEALHVYNAMRL----------SGAAPNRYTYPFVLKACGAERDCLKG 139

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           + +HG + K G   D ++ NA +  Y+   ++  +R++FD M +RD+VSW S++ G + +
Sbjct: 140 RIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIAN 199

Query: 182 DRPVEAIELFGRML-EAGVEVND-ATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECK 238
               EA+ LF  ML + G+   D AT+V+VL A A+   +  G  +H  IVK   +++  
Sbjct: 200 GYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPA 259

Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
             V   LI +Y+  G I  A              W+A+I     HG  +EA+ +F ++  
Sbjct: 260 --VGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVE 317

Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
             +  D     ++LSAC +A +  E + +F  M+  YG+     H+ C+VDLL RAG L+
Sbjct: 318 LGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTMET-YGVVKGEAHYACMVDLLGRAGNLE 376

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYA 418
           +A + + +MP++P   ++  L+ A ++H++ E AE   ++   +  +++G Y++ + +Y 
Sbjct: 377 KAMELIQSMPIQPGKNVYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYE 436

Query: 419 SVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVD 478
             G+W + A +R+++ +K + KP G S +E++    +F + D  HP    IF  L  +  
Sbjct: 437 DEGRWKDAARLRKIIREKEIKKPIGYSSVELESGHKKFGVNDETHPLTTEIFETLVSLGR 496

Query: 479 KLKKEGYN 486
            + KE + 
Sbjct: 497 TMGKEAHT 504


>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
           LC | chr8:27704772-27714873 | 20130731
          Length = 1504

 Score =  213 bits (543), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 202/384 (52%), Gaps = 5/384 (1%)

Query: 108 VLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP--- 164
           +L  CA   L+ +  +L   +       +    N+LI  +   G +  A+++F  M    
Sbjct: 489 MLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSG 548

Query: 165 -DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
              ++++WT++I GL  +    EA  +F +M  AG+  N  ++ S L AC +   L+ GR
Sbjct: 549 VTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGR 608

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
            +HG V  +  +     ++T++IDMYAK G ++ A              + AMIS  ASH
Sbjct: 609 SIHGYVM-RNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASH 667

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G   EA+ LF E+    + PD  T T+VLSAC +  L++E   +F  M     ++P+ +H
Sbjct: 668 GKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKH 727

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           +GC+V LL   G L EA   +  MP  PDA +  +L+ AC  + +TE A  + K  L++ 
Sbjct: 728 YGCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVE 787

Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNH 463
            ++ G+Y+  SNVYA++GKW   + +R  M +KGL K PG S IEV   L+ F+  D +H
Sbjct: 788 PNNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSH 847

Query: 464 PEADNIFVKLDEMVDKLKKEGYNP 487
           PE + I+  LD +  ++     NP
Sbjct: 848 PEKEEIYKILDLLGFEMYYAKSNP 871



 Score =  119 bits (298), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 189/416 (45%), Gaps = 49/416 (11%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLL------TSNPALN 59
           +S  LQ+HA ++K G+S +      SKL    A       N  R+ +        N  L 
Sbjct: 119 LSLGLQIHAHLIKKGSSYSTNEFVESKLVILYA-----KCNLTRVAVHFFRNVVKNQNLF 173

Query: 60  SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
           SY     L+A +       +  AL  ++ M+ +       PDNF  P  LK C  L+   
Sbjct: 174 SYAAIVGLQARN-----GLYKEALLSYVEMMEKGF----CPDNFVVPNGLKACGGLRWIG 224

Query: 120 QGKQLHGFITKMG--FGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR---DVVSWTSL 174
            G+ +HGF+ KMG  F    Y+  +L+ MY   G L  A ++FD MP+R   DVV W S+
Sbjct: 225 FGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVV-WNSM 283

Query: 175 IDGLVDHDRPVEAIELFGRM-LEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
           I G V +   VEA+ LF +M  E GVE ++ ++     ACA+  A+  G++ H +V    
Sbjct: 284 IVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMG 343

Query: 234 RIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLASHGLCKEAIDL 292
             E    + +++++ Y+K G IE                 W  MIS     G+ ++A+++
Sbjct: 344 -FELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEM 402

Query: 293 FLEM-ETCNVKPDERTMTAVLSAC---RNADLVREAY------MVFSDMKKRYGIEPTIQ 342
              M E  N++ D  T++++L+     R+  L ++ +        +SDM    G      
Sbjct: 403 CHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSG------ 456

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
               V+D+ A+ G +  A    +    K D VLW T++ AC     +  A +L  Q
Sbjct: 457 ----VLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQ 508



 Score = 92.8 bits (229), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 16/332 (4%)

Query: 59  NSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           N   +N+M+  Y  +     +  A+ LF  M  R   GV  P   +       CA L+  
Sbjct: 276 NDVVWNSMIVGYVQNG---MNVEAVGLFEKM--RFEGGV-EPSEVSLSGFFSACANLEAV 329

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD-RDVVSWTSLIDG 177
            +GKQ H  +  MGF  +  + +++++ YS  G +     +F  M   +D V+W  +I  
Sbjct: 330 EEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISS 389

Query: 178 LVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIE 236
            V      +A+E+   M E   +  +  T+ S+L   AD+  + +G+K+HG    +    
Sbjct: 390 YVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCI-RNEFY 448

Query: 237 CKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLASHGLCKEAIDLFLE 295
               V + ++DMYAK G ++ A               W  M++  A  GL  EA+ LF +
Sbjct: 449 SDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQ 508

Query: 296 METCNVKPDERTMTA-VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARA 354
           M+  +V P+  +  + +    RN  +V EA  +FS+M+   G+ P +  +  ++  LA+ 
Sbjct: 509 MQMESVPPNVVSWNSLIFGFFRNGQVV-EAQDMFSEMQLS-GVTPNLITWTTMISGLAQN 566

Query: 355 GCLKEAEDFMNAMP---MKPDAVLWRTLIWAC 383
           G   EA      M    M+P+++   + + AC
Sbjct: 567 GLGYEASRVFQQMQGAGMRPNSISITSALSAC 598



 Score = 59.7 bits (143), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 59/123 (47%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++ +    L  C  + L   G+ +HG++ +        I  ++I MY+  G+L  A+ +
Sbjct: 586 PNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFV 645

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F     +++  + ++I     H +  EA+ LF  +++ G+  +  T  SVL AC+    L
Sbjct: 646 FIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLL 705

Query: 220 SMG 222
             G
Sbjct: 706 KEG 708


>Medtr7g078420.1 | PPR containing plant-like protein | HC |
           chr7:29654282-29650656 | 20130731
          Length = 646

 Score =  212 bits (539), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 217/442 (49%), Gaps = 48/442 (10%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G+L  AR+     P  +   +N ML  Y+    P      + LF  ML   + G   PD 
Sbjct: 214 GNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEE---TIRLFNDML---SPGNVQPDE 267

Query: 103 FTFPFVLKCCARL-------KLARQGKQLHGF-------ITKMGFGSDCYIM-------- 140
            T+  V+  C+ L        + R+     GF          +   + C  +        
Sbjct: 268 TTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFE 327

Query: 141 -------------NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
                        NA+I  Y+  GDL  AR LFD+MP RD VSW S+I G   +   V+A
Sbjct: 328 QLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKA 387

Query: 188 IELFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
           I+LF  M+ +   + ++ T+VSV  AC   G L +G     I+KE   I+   +V  +LI
Sbjct: 388 IKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKEN-HIQISISVYNSLI 446

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDER 306
            MY++ G ++ A              +  +ISG A HG   E+I+L L+M+   ++PD  
Sbjct: 447 SMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRI 506

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           T  A+L+AC +A L+ E   +F  +K      P + H+ C++D+L RAG L+EA   + +
Sbjct: 507 TYIAILTACSHAGLLGEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQS 561

Query: 367 MPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNK 426
           MPM+P A ++ +L+ A  +H+  E  E    +  ++   +SG+Y+L SN+YAS G+W + 
Sbjct: 562 MPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDG 621

Query: 427 AEVRELMNKKGLIKPPGSSRIE 448
            +VR+ M K+G+ K  G S +E
Sbjct: 622 DKVRDTMRKQGVKKTTGLSWLE 643



 Score = 90.1 bits (222), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 11/223 (4%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
            +A +  GDL  AR L    P  ++  +N+M+  Y+ + +      A+ LF  M+     
Sbjct: 344 ISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVK---AIKLFEEMISSED- 399

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
               PD  T   V   C  L     G      + +        + N+LI MYS  G +  
Sbjct: 400 --SKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQD 457

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           A  +F  M  RD+VS+ +LI G  +H   +E+IEL  +M E G+E +  T +++L AC+ 
Sbjct: 458 AVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSH 517

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           +G L  G+++   +K        C     +IDM  ++G +E A
Sbjct: 518 AGLLGEGQRLFESIKFPDVDHYAC-----MIDMLGRAGRLEEA 555



 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 135/352 (38%), Gaps = 57/352 (16%)

Query: 68  RAYSLSSDPTHHFHALS-----LFIFMLRRPTH-GVPAPDNFT-FPFVLKCC-------- 112
           R  + SS   H FHA +     +F FML+  +  GV A    + F  +L+ C        
Sbjct: 47  RLLAPSSYTCHIFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSF 106

Query: 113 --ARLKLARQGKQLH-GFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVV 169
               +K A     L    + K G+  D Y+ N ++ +Y+ +G +  AR+LFD MPDR V 
Sbjct: 107 YSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVA 166

Query: 170 SWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIV 229
            W  +I G        EA  LF  M +  +  N  T  +++   A  G L   R     +
Sbjct: 167 DWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKM 226

Query: 230 KEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEA 289
            E+  +                                     W AM+SG A  G  +E 
Sbjct: 227 PERSVVS------------------------------------WNAMLSGYAQGGAPEET 250

Query: 290 IDLFLEM-ETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVV 348
           I LF +M    NV+PDE T   V+S+C +      +  +   +    G  P       ++
Sbjct: 251 IRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALL 310

Query: 349 DLLARAGCLKEAEDFMNAMPMKP--DAVLWRTLIWACKVHEDTERAERLMKQ 398
           D+ A+ G L+ A      + +     +V W  +I A     D   A  L  +
Sbjct: 311 DMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDK 362


>Medtr4g078750.1 | PPR containing plant-like protein | HC |
           chr4:30434764-30433246 | 20130731
          Length = 470

 Score =  212 bits (539), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 213/426 (50%), Gaps = 54/426 (12%)

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N ++RAY++ +    H     +F  ML        +P+  TFP +LK  +   +      
Sbjct: 58  NALIRAYNVHN----HNKVFVIFTNMLANNV----SPNTHTFPPLLKSSSAFVVT----P 105

Query: 124 LHGFITKMGFGSDCYIM-------------------------------NALIHMYSVFGD 152
           LH    K G  SD +++                               NA+I+ +++ G+
Sbjct: 106 LHCQALKRGILSDPFVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGN 165

Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRM------LEAGVEVNDATV 206
           +  A  +F+ MP RDVVSWT++++G         AI  FG M      L+  V+ N+AT 
Sbjct: 166 MEGALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATY 225

Query: 207 VSVLRACAD---SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXX 263
           VSVL +C +    GAL  GR+VHG +  K  ++    V T+LI++Y K GC+  +     
Sbjct: 226 VSVLSSCTELEGKGALDFGRQVHGYIVVKG-VDLGVFVGTSLINLYGKMGCLNYSASVFR 284

Query: 264 XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVRE 323
                    W AMIS LAS+G  KEA+DLF +M+   +KP+  T  AVL+AC     V E
Sbjct: 285 VMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSE 344

Query: 324 AYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWAC 383
              +F  M  ++ + P ++H+GCVVDLL RAG ++EA + +  MP  PD  +    + AC
Sbjct: 345 GLELFESMSSKFQVVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPFPPDKTVLGAFLGAC 404

Query: 384 KVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPG 443
           ++H   E  E + K  L++     G Y+L S++YA   +W++ A++R  + + G+ K P 
Sbjct: 405 RIHGAIELGEEIAKM-LKLQTQHCGQYLLLSSMYAEKERWNHAADLRNEIMEAGIHKIPA 463

Query: 444 SSRIEV 449
            S + +
Sbjct: 464 FSMVHL 469



 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 8/226 (3%)

Query: 38  ALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRP--TH 95
           A + +G++  A L+    P  +   + TM+  ++LS +      A+  F  M+R      
Sbjct: 159 AFTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGN---FGAAIRFFGTMMRHKDVLD 215

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQ---GKQLHGFITKMGFGSDCYIMNALIHMYSVFGD 152
            +  P+  T+  VL  C  L+       G+Q+HG+I   G     ++  +LI++Y   G 
Sbjct: 216 CLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGC 275

Query: 153 LGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRA 212
           L  +  +F  M  R+V +W ++I  L  + R  EA++LF +M   G++ N  T V+VL A
Sbjct: 276 LNYSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTA 335

Query: 213 CADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           CA  G +S G ++   +  K ++         ++D+  ++G I+ A
Sbjct: 336 CARGGFVSEGLELFESMSSKFQVVPVMEHYGCVVDLLGRAGHIQEA 381


>Medtr4g068900.1 | PPR containing plant-like protein | HC |
           chr4:25858642-25860684 | 20130731
          Length = 680

 Score =  212 bits (539), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 234/478 (48%), Gaps = 44/478 (9%)

Query: 31  SKLFTFAALSPSGDLNYARLLLTSNPALN-SYYYNTMLRAYSLSSDPTHHFHALSLFIFM 89
           SK    AA    G+++ A  +   N  LN +  +NT++  Y+ +    +   AL+LF+ M
Sbjct: 196 SKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNG---YMDKALALFVKM 252

Query: 90  LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYS- 148
             R        D  T   VL  C+ LK  + GK +H ++ K  + S+ +I + ++ +Y  
Sbjct: 253 TERGVR----FDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCK 308

Query: 149 ---------VFGDLGV---------------------ARELFDRMPDRDVVSWTSLIDGL 178
                    V+  +G+                     A+ LFD + +R+ V WT+L  G 
Sbjct: 309 CGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGY 368

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDA-TVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
               +  E  +LF + +     + DA  ++ VL ACA    LS+G+++H  +  + R++ 
Sbjct: 369 AKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYIL-RMRLKM 427

Query: 238 KCNVSTALIDMYAKSGCIESAXXXXXXXXXXX--XXXWTAMISGLASHGLCKEAIDLFLE 295
              + +A++DMY+K G I  A                +  MI+G A HG   +AI LF +
Sbjct: 428 DKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQLFHD 487

Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAG 355
           M   NVKPD  T  A+LSACR+  LV +  + F  M+  Y + P I H+ C+VD+  RA 
Sbjct: 488 MLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISMED-YSVLPEINHYACMVDMYGRAN 546

Query: 356 CLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASN 415
            L++A +FM  +P++ DA +W   + AC+++ +T    +  ++ L++G D     +  +N
Sbjct: 547 QLEKALEFMRKIPIQIDATIWGAFLNACQINNNTSLVNKAEEELLKIGADTGSRCVQLAN 606

Query: 416 VYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKL 473
           VYAS G W+    +R+ M  K   K  G S I V+  +H F  GD +H +AD I+  L
Sbjct: 607 VYASEGNWNEMGRIRKKMRVKEAKKLTGCSWIYVENGIHAFTSGDTSHAKADAIYSTL 664



 Score = 83.2 bits (204), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 170/444 (38%), Gaps = 72/444 (16%)

Query: 27  PRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLF 86
           P  +S      A   + +L  AR +  S    +   YN+ML AY + +D  +   A+ LF
Sbjct: 56  PNAYSWNALIMAYIKAQNLTQARAVFDSAVDRDLVSYNSMLSAY-VGADG-YETEAVDLF 113

Query: 87  IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
             M  +    +   D F+   ++   A+L+L   GKQ+H ++ K       +  ++LI+M
Sbjct: 114 DKM--QSARDMIGIDEFSLTTMVNFSAKLRLVCYGKQMHSYMVKTASDLSKFASSSLINM 171

Query: 147 YS---VFGDLGVARELFDRMPD------------------------------RDVVSWTS 173
           YS   +F D       FD + D                               D VSW +
Sbjct: 172 YSKCGLFRDACSVVSGFDGVVDLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNT 231

Query: 174 LIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKK 233
           LI G   +    +A+ LF +M E GV  ++ T+ SVL  C+    L +G+ VH  V +  
Sbjct: 232 LIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKND 291

Query: 234 R------------IECKCN------------------VSTALIDMYAKSGCIESAXXXXX 263
                        + CKC                     ++LI  Y+  G +  A     
Sbjct: 292 YNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFD 351

Query: 264 XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC-NVKPDERTMTAVLSACRNADLVR 322
                    WTA+ SG A    C+E   LF +  T   + PD   +  VL AC     + 
Sbjct: 352 SLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLS 411

Query: 323 EAYMVFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP-DAVLWRTLI 380
               + +  ++ R  ++  +     +VD+ ++ G +  AE     M  +  D +L+  +I
Sbjct: 412 LGKQIHTYILRMRLKMDKKL--LSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMI 469

Query: 381 WACKVHEDTERAERLMKQHLEMGV 404
                H    +A +L    L+  V
Sbjct: 470 AGYAHHGFENKAIQLFHDMLKKNV 493



 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 133/340 (39%), Gaps = 72/340 (21%)

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP------------------------- 164
           K GF S  +  N LIH+YS  G L  A +LFD +P                         
Sbjct: 20  KSGFTSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARA 79

Query: 165 ------DRDVVSWTSLIDGLVDHD-RPVEAIELFGRMLEAG--VEVNDATVVSVLRACAD 215
                 DRD+VS+ S++   V  D    EA++LF +M  A   + +++ ++ +++   A 
Sbjct: 80  VFDSAVDRDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAK 139

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXX------------ 263
              +  G+++H  + +      K   S++LI+MY+K G    A                 
Sbjct: 140 LRLVCYGKQMHSYMVKTASDLSKF-ASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKN 198

Query: 264 ---------------------XXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
                                         W  +I+G A +G   +A+ LF++M    V+
Sbjct: 199 AMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVR 258

Query: 303 PDERTMTAVLSACRNADLVREAYMVFS-DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
            DE T+ +VLS C     ++    V +  +K  Y     I     +VDL  + G ++ AE
Sbjct: 259 FDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFIS--SGIVDLYCKCGNIRYAE 316

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
                + +K    +  +LI       +  +A+RL    LE
Sbjct: 317 LVYAGIGIKSQFAV-SSLIVGYSSQGEMMKAQRLFDSLLE 355


>Medtr8g031210.1 | PPR containing plant-like protein | HC |
           chr8:11676602-11671237 | 20130731
          Length = 703

 Score =  212 bits (539), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 212/428 (49%), Gaps = 9/428 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           ++TM   Y+   D       L LFI ML +       P+  T   VL+ CA +    +G 
Sbjct: 278 WSTMFACYA---DNGAETDVLDLFIEMLDKRI----KPNWVTVVSVLRACACISNLEEGM 330

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H      GF  +  +  AL+ MY        A + F+RMP +DV++W  L  G  D+ 
Sbjct: 331 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNG 390

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              E++ +F  ML +G   +   +V +L   ++ G L      H  V  K   E    + 
Sbjct: 391 MVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVI-KNGFENNQFIG 449

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNV 301
            +LI++YAK   IE A              W+++I+    HG  +EA+  F +M    + 
Sbjct: 450 ASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDT 509

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  ++LSAC ++ L++E   +F  M  +Y ++P  +H+  +VDLL R G L  A 
Sbjct: 510 KPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMAL 569

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           D +N MPM+    +W  L+ AC++H++ +  E   K    +  + +G YIL SN+Y    
Sbjct: 570 DLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDE 629

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
            W +  ++R L+ +K L K  G S +E+   +  FV GD  H E+D+I+  L ++  K++
Sbjct: 630 NWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKLHAKMR 689

Query: 482 KEGYNPKL 489
           +  ++P++
Sbjct: 690 EVAFDPQV 697



 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 182/371 (49%), Gaps = 12/371 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLH+Q LK+G  ++      +KL    A   S  +++A  L    P    Y +N +LR+Y
Sbjct: 22  QLHSQCLKVGLVHDSFI--VTKLNVLYARYAS--IHHAHKLFQETPHKTVYLWNALLRSY 77

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVP-APDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
               +       LSLF  M    +  +   PDN++    LK CA L+    GK +HGF+ 
Sbjct: 78  CFEGEWVE---TLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGFLK 134

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
           K+   +D ++ +ALI +Y+  G +  A E+F   P  DVV WTS++ G      P  A+ 
Sbjct: 135 KVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALA 194

Query: 190 LFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
            F RM+ +  V  +  T+VSV  ACA      +GR VHG VK +K ++ K  ++ +L+ +
Sbjct: 195 FFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK-RKGLDNKLCLANSLLHL 253

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           Y K+G I++A              W+ M +  A +G   + +DLF+EM    +KP+  T+
Sbjct: 254 YGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTV 313

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
            +VL AC     + E  M   ++   YG E        ++D+  +    ++A DF N MP
Sbjct: 314 VSVLRACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372

Query: 369 MKPDAVLWRTL 379
            K D + W  L
Sbjct: 373 -KKDVIAWAVL 382



 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 163/356 (45%), Gaps = 9/356 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +N A  +    P  +   + +++  Y  S  P     AL+ F  M+        +PD 
Sbjct: 156 GQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPEL---ALAFFSRMVVSEK---VSPDP 209

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   V   CA+L   + G+ +HGF+ + G  +   + N+L+H+Y   G +  A  LF  
Sbjct: 210 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 269

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M D+D++SW+++     D+    + ++LF  ML+  ++ N  TVVSVLRACA    L  G
Sbjct: 270 MSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG 329

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            K+H +       E +  VSTAL+DMY K    E A              W  + SG A 
Sbjct: 330 MKIHELAVNYG-FEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYAD 388

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           +G+  E++ +F  M +   +PD   +  +L+      ++++A + F     + G E    
Sbjct: 389 NGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-VCFHAFVIKNGFENNQF 447

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
               ++++ A+   +++A      M  K D V W ++I A   H   E A +   Q
Sbjct: 448 IGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKFFYQ 502


>Medtr8g031210.3 | PPR containing plant-like protein | HC |
           chr8:11673838-11671237 | 20130731
          Length = 703

 Score =  212 bits (539), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 212/428 (49%), Gaps = 9/428 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           ++TM   Y+   D       L LFI ML +       P+  T   VL+ CA +    +G 
Sbjct: 278 WSTMFACYA---DNGAETDVLDLFIEMLDKRI----KPNWVTVVSVLRACACISNLEEGM 330

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H      GF  +  +  AL+ MY        A + F+RMP +DV++W  L  G  D+ 
Sbjct: 331 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNG 390

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              E++ +F  ML +G   +   +V +L   ++ G L      H  V  K   E    + 
Sbjct: 391 MVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVI-KNGFENNQFIG 449

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNV 301
            +LI++YAK   IE A              W+++I+    HG  +EA+  F +M    + 
Sbjct: 450 ASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDT 509

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  ++LSAC ++ L++E   +F  M  +Y ++P  +H+  +VDLL R G L  A 
Sbjct: 510 KPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMAL 569

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           D +N MPM+    +W  L+ AC++H++ +  E   K    +  + +G YIL SN+Y    
Sbjct: 570 DLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDE 629

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
            W +  ++R L+ +K L K  G S +E+   +  FV GD  H E+D+I+  L ++  K++
Sbjct: 630 NWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKLHAKMR 689

Query: 482 KEGYNPKL 489
           +  ++P++
Sbjct: 690 EVAFDPQV 697



 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 182/371 (49%), Gaps = 12/371 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLH+Q LK+G  ++      +KL    A   S  +++A  L    P    Y +N +LR+Y
Sbjct: 22  QLHSQCLKVGLVHDSFI--VTKLNVLYARYAS--IHHAHKLFQETPHKTVYLWNALLRSY 77

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVP-APDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
               +       LSLF  M    +  +   PDN++    LK CA L+    GK +HGF+ 
Sbjct: 78  CFEGEWVE---TLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGFLK 134

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
           K+   +D ++ +ALI +Y+  G +  A E+F   P  DVV WTS++ G      P  A+ 
Sbjct: 135 KVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALA 194

Query: 190 LFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
            F RM+ +  V  +  T+VSV  ACA      +GR VHG VK +K ++ K  ++ +L+ +
Sbjct: 195 FFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK-RKGLDNKLCLANSLLHL 253

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           Y K+G I++A              W+ M +  A +G   + +DLF+EM    +KP+  T+
Sbjct: 254 YGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTV 313

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
            +VL AC     + E  M   ++   YG E        ++D+  +    ++A DF N MP
Sbjct: 314 VSVLRACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372

Query: 369 MKPDAVLWRTL 379
            K D + W  L
Sbjct: 373 -KKDVIAWAVL 382



 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 163/356 (45%), Gaps = 9/356 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +N A  +    P  +   + +++  Y  S  P     AL+ F  M+        +PD 
Sbjct: 156 GQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPEL---ALAFFSRMVVSEK---VSPDP 209

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   V   CA+L   + G+ +HGF+ + G  +   + N+L+H+Y   G +  A  LF  
Sbjct: 210 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 269

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M D+D++SW+++     D+    + ++LF  ML+  ++ N  TVVSVLRACA    L  G
Sbjct: 270 MSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG 329

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            K+H +       E +  VSTAL+DMY K    E A              W  + SG A 
Sbjct: 330 MKIHELAVNYG-FEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYAD 388

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           +G+  E++ +F  M +   +PD   +  +L+      ++++A + F     + G E    
Sbjct: 389 NGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-VCFHAFVIKNGFENNQF 447

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
               ++++ A+   +++A      M  K D V W ++I A   H   E A +   Q
Sbjct: 448 IGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKFFYQ 502


>Medtr3g408390.1 | PPR containing plant-like protein | HC |
           chr3:1481664-1484476 | 20130731
          Length = 392

 Score =  211 bits (538), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/291 (40%), Positives = 167/291 (57%), Gaps = 16/291 (5%)

Query: 163 MPDRDVVSWTSLIDGLV-----DHDRPVEAIELFGRMLEAG---VEVNDATVVSVLRACA 214
           MPDR+VV+W ++I G       +    V  + LF  ML  G   V  ND TVV +L A +
Sbjct: 1   MPDRNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAAS 60

Query: 215 DSGALSMGRKVHGI-VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
             G + +G  +HG  VK   ++E    + T L+DMY+K GC+ESA              W
Sbjct: 61  QLGMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVLTW 120

Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
           TAM +GLA HG  +EA+ +  EM +  VKP+E T T++LSAC +A LV E   +F DM+ 
Sbjct: 121 TAMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDMEG 180

Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDT---E 390
           ++G+ P IQH+GCVVDLL R G L EA DF+  MP+ PD ++WR+L+ AC++H D    E
Sbjct: 181 KFGVVPWIQHYGCVVDLLGRNGNLNEAYDFIMEMPISPDTLIWRSLLSACRIHGDVVMGE 240

Query: 391 RAERLMKQHLEMGVDD----SGSYILASNVYASVGKWSNKAEVRELMNKKG 437
           +  R + +  E   ++    S  Y+  SNVYAS G+W     VR+ M  KG
Sbjct: 241 KVGRFLLKFKEKSSEELAHKSEDYVALSNVYASAGRWDVVEVVRKKMKVKG 291



 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 39/265 (14%)

Query: 56  PALNSYYYNTMLRAYSLSSDPTHH--FHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCA 113
           P  N   +N M+  Y    D       + L LF  ML      V  P++ T   +L   +
Sbjct: 2   PDRNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEV-RPNDTTVVCLLSAAS 60

Query: 114 RLKLARQGKQLHGFITKM--GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSW 171
           +L +   G  LHGF  K+      D +I   L+ MYS  G L  A  +F RM  R+V++W
Sbjct: 61  QLGMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVLTW 120

Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
           T++  GL  H R  EA+++   M   GV+ N+ T  S+L AC  +G +  G ++      
Sbjct: 121 TAMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQL------ 174

Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAID 291
                          DM  K G +                 +  ++  L  +G   EA D
Sbjct: 175 -------------FRDMEGKFGVVP------------WIQHYGCVVDLLGRNGNLNEAYD 209

Query: 292 LFLEMETCNVKPDERTMTAVLSACR 316
             +EM    + PD     ++LSACR
Sbjct: 210 FIMEMP---ISPDTLIWRSLLSACR 231


>Medtr8g031210.2 | PPR containing plant-like protein | HC |
           chr8:11676602-11671244 | 20130731
          Length = 611

 Score =  211 bits (538), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 212/428 (49%), Gaps = 9/428 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           ++TM   Y+   D       L LFI ML +       P+  T   VL+ CA +    +G 
Sbjct: 186 WSTMFACYA---DNGAETDVLDLFIEMLDKRIK----PNWVTVVSVLRACACISNLEEGM 238

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H      GF  +  +  AL+ MY        A + F+RMP +DV++W  L  G  D+ 
Sbjct: 239 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNG 298

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              E++ +F  ML +G   +   +V +L   ++ G L      H  V  K   E    + 
Sbjct: 299 MVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVI-KNGFENNQFIG 357

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNV 301
            +LI++YAK   IE A              W+++I+    HG  +EA+  F +M    + 
Sbjct: 358 ASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDT 417

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  ++LSAC ++ L++E   +F  M  +Y ++P  +H+  +VDLL R G L  A 
Sbjct: 418 KPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMAL 477

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           D +N MPM+    +W  L+ AC++H++ +  E   K    +  + +G YIL SN+Y    
Sbjct: 478 DLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDE 537

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
            W +  ++R L+ +K L K  G S +E+   +  FV GD  H E+D+I+  L ++  K++
Sbjct: 538 NWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKLHAKMR 597

Query: 482 KEGYNPKL 489
           +  ++P++
Sbjct: 598 EVAFDPQV 605



 Score =  151 bits (381), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 144/281 (51%), Gaps = 4/281 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PDN++    LK CA L+    GK +HGF+ K+   +D ++ +ALI +Y+  G +  A E+
Sbjct: 13  PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEV 72

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGA 218
           F   P  DVV WTS++ G      P  A+  F RM+ +  V  +  T+VSV  ACA    
Sbjct: 73  FMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSN 132

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
             +GR VHG VK +K ++ K  ++ +L+ +Y K+G I++A              W+ M +
Sbjct: 133 FKLGRSVHGFVK-RKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFA 191

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
             A +G   + +DLF+EM    +KP+  T+ +VL AC     + E  M   ++   YG E
Sbjct: 192 CYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFE 250

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
                   ++D+  +    ++A DF N MP K D + W  L
Sbjct: 251 METTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVL 290



 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 163/356 (45%), Gaps = 9/356 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +N A  +    P  +   + +++  Y  S  P     AL+ F  M+        +PD 
Sbjct: 64  GQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPEL---ALAFFSRMVVSEK---VSPDP 117

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   V   CA+L   + G+ +HGF+ + G  +   + N+L+H+Y   G +  A  LF  
Sbjct: 118 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 177

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M D+D++SW+++     D+    + ++LF  ML+  ++ N  TVVSVLRACA    L  G
Sbjct: 178 MSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG 237

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            K+H +       E +  VSTAL+DMY K    E A              W  + SG A 
Sbjct: 238 MKIHELAVNYG-FEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYAD 296

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           +G+  E++ +F  M +   +PD   +  +L+      ++++A + F     + G E    
Sbjct: 297 NGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-VCFHAFVIKNGFENNQF 355

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
               ++++ A+   +++A      M  K D V W ++I A   H   E A +   Q
Sbjct: 356 IGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKFFYQ 410


>Medtr4g015760.2 | PPR containing plant-like protein | HC |
           chr4:4766254-4759488 | 20130731
          Length = 673

 Score =  211 bits (536), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 216/428 (50%), Gaps = 9/428 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           ++TM+  Y+   D       L LF  ML +       P+  T   VL+ CA +    +G 
Sbjct: 248 WSTMVACYA---DNGAETDVLDLFNEMLDKRIK----PNWVTVVSVLRACACISNLEEGM 300

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H      GF  +  +  AL+ MY        A +LF+RMP +DV++W  L  G  D+ 
Sbjct: 301 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNG 360

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              E++ +F  ML +G   +   +V +L   ++ G L     +H  V  K   E    + 
Sbjct: 361 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVI-KNGFENNQFIG 419

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNV 301
            +LI++YAK   IE A              W+++I+    HG  +EA+ LF +M    + 
Sbjct: 420 ASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDT 479

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  ++LSAC ++ L++E   +F  M  +Y ++P  +H+  +VDLL R G L  A 
Sbjct: 480 KPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMAL 539

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           D +N MPM+    +W  L+ AC++H++ +  E   K    +  + +G YIL SN+Y+   
Sbjct: 540 DVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDE 599

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
            W +  ++R L+ +K L K  G S +E+   +  F+ GD  H E+D+I+  L ++  K++
Sbjct: 600 NWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMR 659

Query: 482 KEGYNPKL 489
           +  ++P++
Sbjct: 660 EVAFDPQV 667



 Score =  156 bits (395), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 164/339 (48%), Gaps = 8/339 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA-PD 101
             +++A  L    P    Y +N +LR+Y    +       LSLF  M    +  +   PD
Sbjct: 20  ASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVE---TLSLFRQMNNVSSVSIEERPD 76

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
           N++    LK CA L+    GK +HGF+ K+    D ++ +ALI +Y+  G +  A ++F 
Sbjct: 77  NYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFM 136

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALS 220
             P  DVV WTS+I G      P  A+  F RM+ +  V  +  T+VSV  ACA      
Sbjct: 137 EYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFK 196

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
           +GR VHG VK +K ++ K  ++ +L+ +Y K+G I++A              W+ M++  
Sbjct: 197 LGRSVHGFVK-RKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACY 255

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           A +G   + +DLF EM    +KP+  T+ +VL AC     + E  M   ++   YG E  
Sbjct: 256 ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFEME 314

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
                 ++D+  +    ++A D  N MP K D + W  L
Sbjct: 315 TTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVL 352



 Score =  148 bits (373), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 166/356 (46%), Gaps = 9/356 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +N A  +    P  +   + +++  Y  S  P     AL+ F  M+        +PD 
Sbjct: 126 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPEL---ALAFFSRMVVSEK---VSPDP 179

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   V   CA+L   + G+ +HGF+ + G  +   + N+L+H+Y   G +  A  LF  
Sbjct: 180 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 239

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M D+D++SW++++    D+    + ++LF  ML+  ++ N  TVVSVLRACA    L  G
Sbjct: 240 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 299

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            K+H +       E +  VSTAL+DMY K    E A              W  + SG A 
Sbjct: 300 MKIHELAVNYG-FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYAD 358

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           +G+  E++ +F  M +   +PD   +  +L+      ++++A  + + + K  G E    
Sbjct: 359 NGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQF 417

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
               ++++ A+   +++A      M  K D V W ++I A   H   E A +L  Q
Sbjct: 418 IGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQ 472


>Medtr4g015760.3 | PPR containing plant-like protein | HC |
           chr4:4765180-4759488 | 20130731
          Length = 673

 Score =  211 bits (536), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 216/428 (50%), Gaps = 9/428 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           ++TM+  Y+   D       L LF  ML +       P+  T   VL+ CA +    +G 
Sbjct: 248 WSTMVACYA---DNGAETDVLDLFNEMLDKRIK----PNWVTVVSVLRACACISNLEEGM 300

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H      GF  +  +  AL+ MY        A +LF+RMP +DV++W  L  G  D+ 
Sbjct: 301 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNG 360

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              E++ +F  ML +G   +   +V +L   ++ G L     +H  V  K   E    + 
Sbjct: 361 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVI-KNGFENNQFIG 419

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNV 301
            +LI++YAK   IE A              W+++I+    HG  +EA+ LF +M    + 
Sbjct: 420 ASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDT 479

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  ++LSAC ++ L++E   +F  M  +Y ++P  +H+  +VDLL R G L  A 
Sbjct: 480 KPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMAL 539

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           D +N MPM+    +W  L+ AC++H++ +  E   K    +  + +G YIL SN+Y+   
Sbjct: 540 DVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDE 599

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
            W +  ++R L+ +K L K  G S +E+   +  F+ GD  H E+D+I+  L ++  K++
Sbjct: 600 NWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMR 659

Query: 482 KEGYNPKL 489
           +  ++P++
Sbjct: 660 EVAFDPQV 667



 Score =  156 bits (395), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 164/339 (48%), Gaps = 8/339 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA-PD 101
             +++A  L    P    Y +N +LR+Y    +       LSLF  M    +  +   PD
Sbjct: 20  ASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVE---TLSLFRQMNNVSSVSIEERPD 76

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
           N++    LK CA L+    GK +HGF+ K+    D ++ +ALI +Y+  G +  A ++F 
Sbjct: 77  NYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFM 136

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA-GVEVNDATVVSVLRACADSGALS 220
             P  DVV WTS+I G      P  A+  F RM+ +  V  +  T+VSV  ACA      
Sbjct: 137 EYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFK 196

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
           +GR VHG VK +K ++ K  ++ +L+ +Y K+G I++A              W+ M++  
Sbjct: 197 LGRSVHGFVK-RKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACY 255

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
           A +G   + +DLF EM    +KP+  T+ +VL AC     + E  M   ++   YG E  
Sbjct: 256 ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFEME 314

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
                 ++D+  +    ++A D  N MP K D + W  L
Sbjct: 315 TTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVL 352



 Score =  148 bits (373), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 166/356 (46%), Gaps = 9/356 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +N A  +    P  +   + +++  Y  S  P     AL+ F  M+        +PD 
Sbjct: 126 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPEL---ALAFFSRMVVSEK---VSPDP 179

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   V   CA+L   + G+ +HGF+ + G  +   + N+L+H+Y   G +  A  LF  
Sbjct: 180 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 239

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M D+D++SW++++    D+    + ++LF  ML+  ++ N  TVVSVLRACA    L  G
Sbjct: 240 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 299

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            K+H +       E +  VSTAL+DMY K    E A              W  + SG A 
Sbjct: 300 MKIHELAVNYG-FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYAD 358

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           +G+  E++ +F  M +   +PD   +  +L+      ++++A  + + + K  G E    
Sbjct: 359 NGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQF 417

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
               ++++ A+   +++A      M  K D V W ++I A   H   E A +L  Q
Sbjct: 418 IGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQ 472


>Medtr4g015760.4 | PPR containing plant-like protein | HC |
           chr4:4765180-4759488 | 20130731
          Length = 703

 Score =  210 bits (535), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 216/428 (50%), Gaps = 9/428 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           ++TM+  Y+   D       L LF  ML +       P+  T   VL+ CA +    +G 
Sbjct: 278 WSTMVACYA---DNGAETDVLDLFNEMLDKRI----KPNWVTVVSVLRACACISNLEEGM 330

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H      GF  +  +  AL+ MY        A +LF+RMP +DV++W  L  G  D+ 
Sbjct: 331 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNG 390

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              E++ +F  ML +G   +   +V +L   ++ G L     +H  V  K   E    + 
Sbjct: 391 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVI-KNGFENNQFIG 449

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNV 301
            +LI++YAK   IE A              W+++I+    HG  +EA+ LF +M    + 
Sbjct: 450 ASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDT 509

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  ++LSAC ++ L++E   +F  M  +Y ++P  +H+  +VDLL R G L  A 
Sbjct: 510 KPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMAL 569

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           D +N MPM+    +W  L+ AC++H++ +  E   K    +  + +G YIL SN+Y+   
Sbjct: 570 DVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDE 629

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
            W +  ++R L+ +K L K  G S +E+   +  F+ GD  H E+D+I+  L ++  K++
Sbjct: 630 NWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMR 689

Query: 482 KEGYNPKL 489
           +  ++P++
Sbjct: 690 EVAFDPQV 697



 Score =  161 bits (407), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 179/371 (48%), Gaps = 12/371 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLH+Q LK G  ++      +KL    A   S  +++A  L    P    Y +N +LR+Y
Sbjct: 22  QLHSQCLKAGLVHDSFI--VTKLNVLYARYAS--IHHAHKLFQETPHRTVYLWNALLRSY 77

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPA-PDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
               +       LSLF  M    +  +   PDN++    LK CA L+    GK +HGF+ 
Sbjct: 78  CFEGEWVE---TLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLK 134

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
           K+    D ++ +ALI +Y+  G +  A ++F   P  DVV WTS+I G      P  A+ 
Sbjct: 135 KVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALA 194

Query: 190 LFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
            F RM+ +  V  +  T+VSV  ACA      +GR VHG VK +K ++ K  ++ +L+ +
Sbjct: 195 FFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK-RKGLDNKLCLANSLLHL 253

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           Y K+G I++A              W+ M++  A +G   + +DLF EM    +KP+  T+
Sbjct: 254 YGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTV 313

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
            +VL AC     + E  M   ++   YG E        ++D+  +    ++A D  N MP
Sbjct: 314 VSVLRACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372

Query: 369 MKPDAVLWRTL 379
            K D + W  L
Sbjct: 373 -KKDVIAWAVL 382



 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 166/356 (46%), Gaps = 9/356 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +N A  +    P  +   + +++  Y  S  P     AL+ F  M+        +PD 
Sbjct: 156 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPEL---ALAFFSRMVVSEK---VSPDP 209

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   V   CA+L   + G+ +HGF+ + G  +   + N+L+H+Y   G +  A  LF  
Sbjct: 210 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 269

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M D+D++SW++++    D+    + ++LF  ML+  ++ N  TVVSVLRACA    L  G
Sbjct: 270 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 329

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            K+H +       E +  VSTAL+DMY K    E A              W  + SG A 
Sbjct: 330 MKIHELAVNYG-FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYAD 388

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           +G+  E++ +F  M +   +PD   +  +L+      ++++A  + + + K  G E    
Sbjct: 389 NGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQF 447

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
               ++++ A+   +++A      M  K D V W ++I A   H   E A +L  Q
Sbjct: 448 IGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQ 502


>Medtr4g015760.1 | PPR containing plant-like protein | HC |
           chr4:4766254-4759488 | 20130731
          Length = 703

 Score =  210 bits (535), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 216/428 (50%), Gaps = 9/428 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           ++TM+  Y+   D       L LF  ML +       P+  T   VL+ CA +    +G 
Sbjct: 278 WSTMVACYA---DNGAETDVLDLFNEMLDKRI----KPNWVTVVSVLRACACISNLEEGM 330

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
           ++H      GF  +  +  AL+ MY        A +LF+RMP +DV++W  L  G  D+ 
Sbjct: 331 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNG 390

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              E++ +F  ML +G   +   +V +L   ++ G L     +H  V  K   E    + 
Sbjct: 391 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVI-KNGFENNQFIG 449

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET-CNV 301
            +LI++YAK   IE A              W+++I+    HG  +EA+ LF +M    + 
Sbjct: 450 ASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDT 509

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           KP+  T  ++LSAC ++ L++E   +F  M  +Y ++P  +H+  +VDLL R G L  A 
Sbjct: 510 KPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMAL 569

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
           D +N MPM+    +W  L+ AC++H++ +  E   K    +  + +G YIL SN+Y+   
Sbjct: 570 DVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDE 629

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLK 481
            W +  ++R L+ +K L K  G S +E+   +  F+ GD  H E+D+I+  L ++  K++
Sbjct: 630 NWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMR 689

Query: 482 KEGYNPKL 489
           +  ++P++
Sbjct: 690 EVAFDPQV 697



 Score =  161 bits (407), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 179/371 (48%), Gaps = 12/371 (3%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLH+Q LK G  ++      +KL    A   S  +++A  L    P    Y +N +LR+Y
Sbjct: 22  QLHSQCLKAGLVHDSFI--VTKLNVLYARYAS--IHHAHKLFQETPHRTVYLWNALLRSY 77

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPA-PDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
               +       LSLF  M    +  +   PDN++    LK CA L+    GK +HGF+ 
Sbjct: 78  CFEGEWVE---TLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLK 134

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIE 189
           K+    D ++ +ALI +Y+  G +  A ++F   P  DVV WTS+I G      P  A+ 
Sbjct: 135 KVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALA 194

Query: 190 LFGRMLEA-GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDM 248
            F RM+ +  V  +  T+VSV  ACA      +GR VHG VK +K ++ K  ++ +L+ +
Sbjct: 195 FFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK-RKGLDNKLCLANSLLHL 253

Query: 249 YAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTM 308
           Y K+G I++A              W+ M++  A +G   + +DLF EM    +KP+  T+
Sbjct: 254 YGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTV 313

Query: 309 TAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMP 368
            +VL AC     + E  M   ++   YG E        ++D+  +    ++A D  N MP
Sbjct: 314 VSVLRACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372

Query: 369 MKPDAVLWRTL 379
            K D + W  L
Sbjct: 373 -KKDVIAWAVL 382



 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 166/356 (46%), Gaps = 9/356 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +N A  +    P  +   + +++  Y  S  P     AL+ F  M+        +PD 
Sbjct: 156 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPEL---ALAFFSRMVVSEK---VSPDP 209

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   V   CA+L   + G+ +HGF+ + G  +   + N+L+H+Y   G +  A  LF  
Sbjct: 210 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 269

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M D+D++SW++++    D+    + ++LF  ML+  ++ N  TVVSVLRACA    L  G
Sbjct: 270 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 329

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLAS 282
            K+H +       E +  VSTAL+DMY K    E A              W  + SG A 
Sbjct: 330 MKIHELAVNYG-FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYAD 388

Query: 283 HGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQ 342
           +G+  E++ +F  M +   +PD   +  +L+      ++++A  + + + K  G E    
Sbjct: 389 NGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQF 447

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
               ++++ A+   +++A      M  K D V W ++I A   H   E A +L  Q
Sbjct: 448 IGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQ 502


>Medtr8g063450.1 | PPR containing plant-like protein | HC |
           chr8:26602939-26605163 | 20130731
          Length = 699

 Score =  209 bits (532), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 213/422 (50%), Gaps = 27/422 (6%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N+ML AY L     H    L+  +F +   + G   PD++++  V+  C+  +   +G+
Sbjct: 273 WNSMLAAYLL-----HKKENLAFDVF-IEMQSFGFE-PDDYSYTGVISGCSIKEHKSRGE 325

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGD--LGVARELFDRMPDRDVVSWTSLIDGLVD 180
            LHG + K G      + NALI MY  F +  +  A  +F  M  +D  +W S++ G V 
Sbjct: 326 SLHGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQ 385

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
             R  +A+ LF ++    VE++D T  +V+R C+D   L +G++VH        +  K  
Sbjct: 386 VGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVH-------VLSLKVG 438

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
             T          C E+               W ++I G A HG    A++LF  M    
Sbjct: 439 FDTNKYVGKDAKKCFETTSNDNAII-------WNSIIFGYAQHGQGNIALELFYLMREKK 491

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEA 360
           VKPD  T  AVL+AC +  LV E   +   M+  +GI   ++H+ C VDL  RAG L+E 
Sbjct: 492 VKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRAGYLEEG 551

Query: 361 EDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
           +  +  MP +PDA++ RTL+ AC+   + E A  + K  L +  +D  +Y+L S++Y  +
Sbjct: 552 KALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLSDLYGRL 611

Query: 421 GKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKL 480
             W  KA V  LM ++G+ K PG S IEV   +H F   D++HP++  I+    E++ +L
Sbjct: 612 KMWDEKASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIY----ELLLQL 667

Query: 481 KK 482
           K+
Sbjct: 668 KE 669



 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 19/313 (6%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLH+ ++K+  + N     FS        +  G ++ A ++    P  N   +NT++  Y
Sbjct: 121 QLHSVMIKMRLNEN----VFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGY 176

Query: 71  SLSSDPTHHFHALSLFIFMLR-RPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFIT 129
           S   D       L +  +++R +   GV   D    P +L     ++      QLH  I 
Sbjct: 177 SRVGD-------LDMAFWLMRCQELEGVGIDDGTVSP-LLTLLDGVRFYSLVMQLHCKIV 228

Query: 130 KMGFGSDCYIMNALIHMYSVFGDLGVARELFD---RMPDRDVVSWTSLIDGLVDHDRPVE 186
           K G  +   + NA+I  YS    L  A  +F     +  RD+V+W S++   + H +   
Sbjct: 229 KHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENL 288

Query: 187 AIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALI 246
           A ++F  M   G E +D +   V+  C+     S G  +HG+V  K+  E    VS ALI
Sbjct: 289 AFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVI-KRGAEVSVPVSNALI 347

Query: 247 DMYA--KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
            MY    + C+E A              W ++++G    G  ++A+ LF+++ +  V+ D
Sbjct: 348 AMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEID 407

Query: 305 ERTMTAVLSACRN 317
           + T +AV+  C +
Sbjct: 408 DYTFSAVIRCCSD 420



 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 8/272 (2%)

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           H    K G  SD Y  N LI  YS    L +A +LFD+MP RD VSW ++I G V+    
Sbjct: 22  HCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADL 81

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
               +L   M  +G   ++ T  S L+  A +  L +G+++H ++  K R+       +A
Sbjct: 82  DSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMI-KMRLNENVFSGSA 140

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           L+DMYAK G ++ A              W  +I+G +  G    A  L    E   V  D
Sbjct: 141 LLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGID 200

Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKK--RYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           + T++ +L+     D VR   +V     K  ++G+E        ++   +    L++AE 
Sbjct: 201 DGTVSPLLTL---LDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAER 257

Query: 363 -FMNAMPMK-PDAVLWRTLIWACKVHEDTERA 392
            F+ A+ +   D V W +++ A  +H+    A
Sbjct: 258 VFVGAVTVTCRDLVTWNSMLAAYLLHKKENLA 289



 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 126/305 (41%), Gaps = 21/305 (6%)

Query: 14  AQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLS 73
             I  L TSNN             A S    L  A  L    P  ++  +N ++  Y  +
Sbjct: 29  GSISDLYTSNN----------LITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNT 78

Query: 74  SDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGF 133
           +D    +  L+     +R   H   A DN TF   LK  AR +    G+QLH  + KM  
Sbjct: 79  ADLDSTWQLLN----AMRVSGH---AFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRL 131

Query: 134 GSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGR 193
             + +  +AL+ MY+  G +  A  +F  MP+ + VSW +LI G         A  L   
Sbjct: 132 NENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRC 191

Query: 194 MLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG 253
               GV ++D TV  +L         S+  ++H  +  K  +E    V  A+I  Y++  
Sbjct: 192 QELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIV-KHGLEAFNIVCNAIITAYSECC 250

Query: 254 CIESAXXXXXXXXXXX---XXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
            ++ A                 W +M++    H     A D+F+EM++   +PD+ + T 
Sbjct: 251 SLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTG 310

Query: 311 VLSAC 315
           V+S C
Sbjct: 311 VISGC 315


>Medtr1g040705.2 | PPR containing plant-like protein | HC |
           chr1:15076230-15082956 | 20130731
          Length = 613

 Score =  208 bits (530), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 192/370 (51%), Gaps = 10/370 (2%)

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
           + +++ C  +  L   + VH  V +      K +    +++MY + G ++ A        
Sbjct: 254 LRLMQLCGKAEFLEEAKVVHRYVLQHLS-PLKVSTCNGILEMYFQCGSVDDAVNVFKNMN 312

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                    MI  LA +G  +++IDLF + +   +KPD +    V  AC     + E  +
Sbjct: 313 ERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGML 372

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
            F  M + Y I PT++H+  +VD++   G L EA +F+  MPM+P   +W TL+ +C+VH
Sbjct: 373 HFESMSRDYEIVPTMEHYVSIVDMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVH 432

Query: 387 EDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSR 446
            +TE  +R  +   ++   D       S V   +       E  ++   K   KPP ++ 
Sbjct: 433 GNTELGDRCAELVEKL---DPSRLNEKSKVSLLL------IETSDITKNKKQNKPPDNNP 483

Query: 447 IEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQLL 506
           +     +HE+  GD + PE + I+  L  +  ++K+ GY  +    L ++D E+K   LL
Sbjct: 484 VGNMNRIHEYRAGDTSLPENNMIYALLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALL 543

Query: 507 HHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHHFK 566
            HSE+LA+A GL+ +   S IR++KNLR C DCH  +K+IS +  R+ I+RD  RFHHFK
Sbjct: 544 GHSERLAIAKGLLNSPARSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRFHHFK 603

Query: 567 NGDCSCKDYW 576
           NG CSC+DYW
Sbjct: 604 NGLCSCRDYW 613


>Medtr7g084830.1 | PPR containing plant-like protein | HC |
           chr7:32742835-32744848 | 20130731
          Length = 476

 Score =  207 bits (528), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 193/395 (48%), Gaps = 44/395 (11%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+HA+I++   +++       KL   +  S  G ++YA L+       + + +N M+RAY
Sbjct: 38  QIHARIIRFRLTHDQLL--IRKLCQIS--SSYGKIDYASLVFDQLNDPDIFTWNVMIRAY 93

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
           + S  P          IF+ +        PD FT+PFV+  C    +   G+  HG   K
Sbjct: 94  NTSGLPQKS-------IFLFKDMICCGFLPDKFTYPFVINACIASGVIDFGRLTHGLAIK 146

Query: 131 MGFGSDCYIMNALIHMY-----------SVF---------------------GDLGVARE 158
           MGF SD Y+ N ++++Y            VF                     G L  ARE
Sbjct: 147 MGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKLDTARE 206

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           +F+R+P ++VVSWT++I+G V +D P++A +LF RML   V  N+ T+VS+++AC D G+
Sbjct: 207 VFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGS 266

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           L +GR++H     K   E    + TAL+DMY+K G +++A              W  M++
Sbjct: 267 LKLGRRMHDFAL-KNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLT 325

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
               HG   E +DLF EME   V PD  T   VLSAC   + +      FS M + Y + 
Sbjct: 326 SFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQINDLELGQKYFSLMTEHYSLT 385

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDA 373
           P ++H+ C+V L  RA  L E     + M +  +A
Sbjct: 386 PILEHYTCMVGLYTRANELNEIRTLGDTMSLSIEA 420



 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 130/318 (40%), Gaps = 35/318 (11%)

Query: 119 RQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGL 178
           +Q KQ+H  I +     D  ++  L  + S +G +  A  +FD++ D D+ +W  +I   
Sbjct: 34  KQLKQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPDIFTWNVMIRAY 93

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGI---------- 228
                P ++I LF  M+  G   +  T   V+ AC  SG +  GR  HG+          
Sbjct: 94  NTSGLPQKSIFLFKDMICCGFLPDKFTYPFVINACIASGVIDFGRLTHGLAIKMGFWSDV 153

Query: 229 ----------------------VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
                                 V +K R+    + +T +  + A  G +++A        
Sbjct: 154 YVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVA-CGKLDTAREVFERIP 212

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                 WTAMI+G   +    +A DLF  M   NV+P+E T+ +++ AC +   ++    
Sbjct: 213 SKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRR 272

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           +  D   + G E        +VD+ ++ G L  A      M ++  A  W T++ +  VH
Sbjct: 273 M-HDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNLAT-WNTMLTSFGVH 330

Query: 387 EDTERAERLMKQHLEMGV 404
                   L K+  + GV
Sbjct: 331 GFGNEVLDLFKEMEKAGV 348


>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:15372357-15367000 | 20130731
          Length = 686

 Score =  207 bits (528), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 206/404 (50%), Gaps = 12/404 (2%)

Query: 44  DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
           D+  AR L       ++  YN M+  Y  +  P     A+++F  M++       A  N 
Sbjct: 289 DITKARKLFERLGNKDAVVYNVMMTGYLENGLPVE---AVNVFREMVK-----TNASTNV 340

Query: 104 T-FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
             F  ++   ++L+  R  + +HG++ +    +   I N +IH Y+ FG +  ARE+F+R
Sbjct: 341 ALFLNLISALSKLRDIRLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNR 400

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M  RD+VSWTS+I G V H    +AI LF  +    + ++  T++ +L+A +  G LS  
Sbjct: 401 MRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFI 460

Query: 223 RKVHGIVKEKKRIECK-CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
           ++VH      +    K  +V+ +LI  YAK G + +A              W AMI   A
Sbjct: 461 KEVHCF--SYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYA 518

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
            HG   E ++LF  M+   V PDE T T++L+AC ++ LV E   +F  M K Y I P  
Sbjct: 519 MHGNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNE 578

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
            H+ C+VDLL+RAG L+EA + + +MP    +     L+ AC+++ DTE  E + KQ L+
Sbjct: 579 VHYSCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEAIGKQILK 638

Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
           +    SG Y L SN+ A  G+W   A++R +         PG S
Sbjct: 639 LEPHSSGPYALVSNICAQGGRWDEVAQIRAMTKNTEFKSTPGYS 682



 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 2/215 (0%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           PD  T    + CC  L   R+G  +HG++  MG   D     AL+ +Y    D+  AR+L
Sbjct: 238 PDLLTLANAIFCCVELNYLRRGMSIHGYMITMGVELDLVASTALVDLYCKI-DITKARKL 296

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+R+ ++D V +  ++ G +++  PVEA+ +F  M++     N A  ++++ A +    +
Sbjct: 297 FERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDI 356

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
            + R +HG V     I     ++  +I  YAK G +  A              WT+MI G
Sbjct: 357 RLVRSIHGYVLRHMHIT-HVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKG 415

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
              HG   +AI LF  ++  ++  D  T+  +L A
Sbjct: 416 YVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQA 450



 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 27/355 (7%)

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
           + Y +M+ AY  S     +    + FI        G+  P+  T   ++   A+L+  R+
Sbjct: 99  FAYTSMITAYGHSGGSCVYGAFNTAFIM----QQQGM-LPNRVTLVSLMHAAAKLRALRE 153

Query: 121 GKQLHGFITK--MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR---DVVSWTSLI 175
           G+ +HG+  +  +G G D +    L+ MY   G +G+A  +F +M  R    V SW +LI
Sbjct: 154 GQAVHGYAVRREIGLGDDVF-ETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALI 212

Query: 176 DGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
            G + + + +EA ELF RM+   V  +  T+ + +  C +   L  G  +HG +     +
Sbjct: 213 AGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYMITMG-V 271

Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
           E     STAL+D+Y K   I  A              +  M++G   +GL  EA+++F E
Sbjct: 272 ELDLVASTALVDLYCKID-ITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFRE 330

Query: 296 METCNVKPDER---TMTAVLSACRNADLVREAY-MVFSDMKKRYGIEPTIQHFGCVVDLL 351
           M   N   +      + + LS  R+  LVR  +  V   M   + +E   Q    ++   
Sbjct: 331 MVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHMHITH-VEIANQ----IIHAY 385

Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERA----ERLMKQHLEM 402
           A+ G + +A +  N M  + D V W ++I     H   ++A      L ++HL +
Sbjct: 386 AKFGYVVDAREVFNRMRTR-DLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSI 439



 Score = 93.6 bits (231), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 125/283 (44%), Gaps = 10/283 (3%)

Query: 104 TFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRM 163
           T  F LK C  L     G  +H    K+ F SDC++ ++LI +YS +G +  A ++FD +
Sbjct: 34  TITFCLKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEI 93

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGR---MLEAGVEVNDATVVSVLRACADSGALS 220
            ++D+ ++TS+I     H         F     M + G+  N  T+VS++ A A   AL 
Sbjct: 94  TNKDIFAYTSMITA-YGHSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALR 152

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI---ESAXXXXXXXXXXXXXXWTAMI 277
            G+ VHG    ++         T L+DMY K G +    S               W A+I
Sbjct: 153 EGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALI 212

Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           +G   +G   EA +LF  M   NV PD  T+   +  C   + +R    +   M    G+
Sbjct: 213 AGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYMITM-GV 271

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           E  +     +VDL  +   + +A      +  K DAV++  ++
Sbjct: 272 ELDLVASTALVDLYCKID-ITKARKLFERLGNK-DAVVYNVMM 312


>Medtr6g018720.1 | PPR containing plant-like protein | HC |
           chr6:7213956-7209580 | 20130731
          Length = 535

 Score =  206 bits (524), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/314 (39%), Positives = 176/314 (56%), Gaps = 9/314 (2%)

Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
           ++ ++++  Y   GD+  A  +F R+P R++  W S+I G V +    +A+E FG M   
Sbjct: 213 FVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVD 272

Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
           G E ++ TVVSVL ACA  G L  G+++H ++ E K I     V + LIDMYAK G + +
Sbjct: 273 GFEPDEFTVVSVLSACAQLGDLDAGKQMHHMI-ECKGIAVNQFVLSGLIDMYAKCGDLVN 331

Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
           A              W AMI+G A +G C E ++    ME  N++PD  T   VLSAC +
Sbjct: 332 ARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSACAH 391

Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
             LV EA  V S M++ YGIE  I+H+GC+VDLL RAG LKEA + +  MPMKP+  +  
Sbjct: 392 GGLVSEALEVISKMEE-YGIEMGIRHYGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLG 450

Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSY----ILASNVYASVGKWSNKAEVRELM 433
            +I AC +H D + AE++MK    +GVD +       +L SN+YA+  KW     +R  M
Sbjct: 451 AMIGACWIHSDMKMAEQVMKM---IGVDSAACVNSHNVLLSNIYAASEKWEKSEMIRSSM 507

Query: 434 NKKGLIKPPGSSRI 447
              G  K PG S I
Sbjct: 508 VDGGSEKIPGCSSI 521



 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 115/276 (41%), Gaps = 48/276 (17%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA--P 100
           GD+  A  +    P  N   +N+M+  Y  +        A             GV    P
Sbjct: 226 GDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFG---------EMGVDGFEP 276

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D FT   VL  CA+L     GKQ+H  I   G   + ++++ LI MY+  GDL  AR +F
Sbjct: 277 DEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVF 336

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           +   +R+V  W ++I G   + +  E +E   RM E+ +  +  T ++VL ACA  G +S
Sbjct: 337 ESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVS 396

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKS-GCIESAXXXXXXXXXXXXXXWTAMISG 279
              +V   ++E              I+M  +  GC                     M+  
Sbjct: 397 EALEVISKMEEYG------------IEMGIRHYGC---------------------MVDL 423

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSAC 315
           L   G  KEA +L   M    +KP+E  + A++ AC
Sbjct: 424 LGRAGRLKEAYELIKRMP---MKPNETVLGAMIGAC 456



 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/420 (22%), Positives = 160/420 (38%), Gaps = 83/420 (19%)

Query: 63  YNTMLRAYSLSSDPTHHF---HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
           +N    ++S+ ++ T+      AL L+       TH     D    P +LK C       
Sbjct: 14  FNPSNWSHSIRNNSTNQASLKRALVLYKQTRHDTTH-----DPTVIPQLLKACDSHPFLP 68

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
             K LH    K G   D +I  A++  Y+  G +  AR++FD M +R+ V+W ++I G +
Sbjct: 69  YVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYL 128

Query: 180 DHDRPVEAIELFGRM----------LEAGVEVNDATVVS-------------------VL 210
            +     A+  F  M          +  G   N  T+ +                   ++
Sbjct: 129 RNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTMMV 188

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
              A  G +   R+V  ++ E+        V ++++  Y K G +  A            
Sbjct: 189 DGYAKKGEMEDAREVFELMPERNYF-----VWSSMVCGYCKKGDVMEAEAIFRRIPVRNL 243

Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN-ADLVREAYMVFS 329
             W +MI+G   +G  ++A++ F EM     +PDE T+ +VLSAC    DL  +A     
Sbjct: 244 EIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDL--DAGKQMH 301

Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE---------------------------- 361
            M +  GI         ++D+ A+ G L  A                             
Sbjct: 302 HMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCN 361

Query: 362 ------DFMNAMPMKPDAVLWRTLIWACK----VHEDTERAERLMKQHLEMGVDDSGSYI 411
                 D M    ++PDAV + T++ AC     V E  E   ++ +  +EMG+   G  +
Sbjct: 362 EVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKMEEYGIEMGIRHYGCMV 421


>Medtr2g009760.1 | PPR containing plant-like protein | HC |
           chr2:2078277-2080236 | 20130731
          Length = 622

 Score =  205 bits (522), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 185/351 (52%), Gaps = 2/351 (0%)

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGD-LGVAR 157
           +P+  T   +L  CAR    + GK++HG+  + GF S      ALI++Y   G  L +A 
Sbjct: 270 SPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAE 329

Query: 158 ELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSG 217
            +F+    RDVV W+S+I          +A++LF +M     E N  T+++V+ AC +  
Sbjct: 330 RIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLS 389

Query: 218 ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
           +   G  +HG +  K  I     V  ALI+MYAK G ++ +              W +MI
Sbjct: 390 SFKHGGVIHGYIL-KFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMI 448

Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           S    HG  ++A+  F EM+   VK D  T  AVLSAC +A LV E   +F  +     I
Sbjct: 449 SAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEI 508

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
             TI+H+ C++DL  R+G L++A + +  MPMKP A +W +L+ +CK+H   + AE L  
Sbjct: 509 PITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSS 568

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIE 448
           Q +    +++ SY L S ++A  G+W +  +VRE M  + L K  G SRIE
Sbjct: 569 QLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIE 619



 Score =  123 bits (309), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 172/375 (45%), Gaps = 14/375 (3%)

Query: 44  DLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNF 103
           D+  AR +  + P  ++  +N+M+ AY  +         L  F F+       +P P+  
Sbjct: 116 DIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFL-----GFLPKPELL 170

Query: 104 TFPFVLKCCARLKLA-RQGKQLHGFIT---KMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
               V  C   + L  R G+Q+HG +    ++      ++  A +  Y   GD  +AR +
Sbjct: 171 A-SMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSV 229

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           FD M  ++ VSWT++I G  ++     A+  +  M   GV  N  T++++L ACA  G +
Sbjct: 230 FDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFV 289

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG-CIESAXXXXXXXXXXXXXXWTAMIS 278
             G+++HG    +    C  + S ALI +Y + G  +  A              W+++I 
Sbjct: 290 KYGKEIHGYAFRRGFDSCH-SFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIG 348

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
             A  G   +A+ LF +M T   +P+  T+ AV+SAC N    +   ++   + K +GI 
Sbjct: 349 SYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILK-FGIG 407

Query: 339 PTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
            +I     ++++ A+ G L ++      MP + D+V W ++I A  +H   E+A +   +
Sbjct: 408 FSIFVCNALINMYAKCGSLDDSRKIFLEMPSR-DSVTWNSMISAYGLHGYGEQALQHFYE 466

Query: 399 HLEMGVDDSGSYILA 413
             E GV       LA
Sbjct: 467 MKERGVKLDAVTFLA 481



 Score =  115 bits (289), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 7/301 (2%)

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           F  P V+K C+       G QLH      G  +D  + N++I MY+ F D+  AR++FD 
Sbjct: 67  FVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDT 126

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS-- 220
           MP RD ++W S+I+  + +   VEA+++       G       + S++  C     L   
Sbjct: 127 MPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWR 186

Query: 221 MGRKVHGIVKEKKRIECKCNV--STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           +GR++HG+V    RI  + +V  STA +D Y + G    A              WTA+IS
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246

Query: 279 GLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIE 338
           G A++     A+  + EM+   V P+  T+ A+L+AC     V+    +     +R G +
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRR-GFD 305

Query: 339 PTIQHFGCVVDLLARAG-CLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
                   ++ L    G  L  AE       ++ D VLW ++I +     ++++A +L  
Sbjct: 306 SCHSFSPALIYLYCECGQSLHLAERIFEGSSLR-DVVLWSSIIGSYARRGESDKALKLFN 364

Query: 398 Q 398
           +
Sbjct: 365 K 365


>Medtr4g086270.1 | PPR containing plant-like protein | HC |
           chr4:33780755-33778471 | 20130731
          Length = 565

 Score =  205 bits (522), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/395 (32%), Positives = 201/395 (50%), Gaps = 40/395 (10%)

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHG-IVKEKKRIECKCNVSTA 244
           EA+EL    +E G++ +      +   C  S ++   +KVH   ++   R + K  +   
Sbjct: 207 EALEL----MEKGIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFK--MHNK 260

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           +I+MY     +  A              W  MI G A+  +  E + LF +M    ++  
Sbjct: 261 VIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEIT 320

Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFM 364
             TM AVLSAC +A+ V +AY+    MK +YGIEP ++H+  ++D+L ++G LKEAE+F+
Sbjct: 321 SETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFI 380

Query: 365 NAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWS 424
             +P +P   ++ TL    ++H D +  + +  + L + +D S                 
Sbjct: 381 EQLPFEPTVTVFETLKNYARIHGDVDLEDHV--EELIVSLDPS----------------- 421

Query: 425 NKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDE---MVDKLK 481
                + + NK     P   + I +    +  +  +Y +P       K DE    ++ +K
Sbjct: 422 -----KAVANKIPTPPPKKYTAISMLDGKNRII--EYKNP----TLYKDDEKLIAMNSMK 470

Query: 482 KEGYNPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHE 541
             GY P    VL +ID E K   LL+HSE+LA+AYGLI T   + +RI+KNLR C DCH 
Sbjct: 471 DAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHN 530

Query: 542 FMKLISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
            +K++S+I  R++IVRD  RFHHFK+G CSC DYW
Sbjct: 531 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565



 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%)

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
           F  +   C + K     K++H +  +  F SD  + N +I MY     +  AR +FD MP
Sbjct: 223 FEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYGNCKSMTDARRVFDHMP 282

Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
           +R++ SW  +I G  +     E ++LF +M E G+E+   T+++VL AC  + A+     
Sbjct: 283 NRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLAVLSACGSAEAVEDAYI 342

Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
               +K K  IE        L+D+  +SG ++ A
Sbjct: 343 YLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEA 376


>Medtr6g091880.1 | PPR containing plant-like protein | HC |
           chr6:34616147-34614592 | 20130731
          Length = 446

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/391 (33%), Positives = 195/391 (49%), Gaps = 30/391 (7%)

Query: 186 EAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
           + +EL G+    G   + +  +S+L+ C D  +L +G++VH  ++  K       +   L
Sbjct: 86  QVLELMGQ----GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSK-FGGNVELCNRL 140

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           I +Y K G ++ A                 MI G   +GL  + + +F +M    V PDE
Sbjct: 141 IGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQGVVPDE 200

Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
            T   VL+ C   D V E  M F  MK+ YGI P ++H+  VV++   AG L EA +F+ 
Sbjct: 201 ETFALVLAVCALVDGVEEGLMQFESMKE-YGIVPGMEHYLGVVNIFGCAGRLDEAHEFIE 259

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
            MP++    LW TL    ++H D ER +                   A  +   +     
Sbjct: 260 NMPIEAGVELWETLRNFARIHGDLERED------------------CADELLTVLDPSKA 301

Query: 426 KAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGY 485
            A+   L  +K   K    + +E    + E+     N P  +   VKL  +  ++++ GY
Sbjct: 302 AADKVPLPQRK---KQSAINMLEEKNRVSEYRC---NMPYKEEGDVKLRGLTGQMREAGY 355

Query: 486 NPKLSEVLLEIDDEEKATQLLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKL 545
            P    VL +ID+EEK   L +HSE+LA+AYGLI T   + +RI+KNLR C DCH  +K+
Sbjct: 356 VPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKI 415

Query: 546 ISKIYQRDIIVRDRIRFHHFKNGDCSCKDYW 576
           +SKI  R++IVRD  RFHHFK+G CSC DYW
Sbjct: 416 MSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 446



 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 62/114 (54%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D   F  +LK C  LK    GK++H F+ +  FG +  + N LI +Y   G +  AR++F
Sbjct: 98  DYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVF 157

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
           D+MPDR+V S   +I G   +   ++ + +F +M + GV  ++ T   VL  CA
Sbjct: 158 DKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQGVVPDEETFALVLAVCA 211


>Medtr5g094220.1 | PPR containing plant-like protein | HC |
           chr5:41149037-41146758 | 20130731
          Length = 759

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/325 (35%), Positives = 175/325 (53%), Gaps = 3/325 (0%)

Query: 112 CARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSW 171
           C +L     G+ +H  + K        + N+LI MY     + V+  +F+R  +RDV+ W
Sbjct: 426 CGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILW 484

Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
            +LI   +      EAI LF  M+      N AT+V VL AC+    L  G ++H  + E
Sbjct: 485 NALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINE 544

Query: 232 KKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAID 291
           K   +    + TAL+DMYAK G +E +              W AMISG   +G  + AI+
Sbjct: 545 KG-FKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIE 603

Query: 292 LFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
           +F  ME  NVKP+E T  ++LSAC +A LV E   VF+ M+  Y ++P ++H+ C+VDLL
Sbjct: 604 IFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQS-YSVKPNLKHYTCMVDLL 662

Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYI 411
            R+  L+EAE+ + +MP+ PD  +W  L+ ACK H   E   R+ K  ++   ++ G YI
Sbjct: 663 GRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYI 722

Query: 412 LASNVYASVGKWSNKAEVRELMNKK 436
           + +N+Y+S+G+W     VR  M  +
Sbjct: 723 MVANMYSSIGRWDEAENVRRTMKDR 747



 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 24/324 (7%)

Query: 3   VTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNY---ARLLLTSNPALN 59
           +TT+   L  HA  +  G S N  P   +KL     +S    LN+   +  L  S P  +
Sbjct: 22  ITTLQSLLPFHAVTVTTGNSTN--PFIAAKL-----ISLYDTLNHPTSSSTLFHSLPFKD 74

Query: 60  SYYYNTMLRA-YSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA 118
           ++ +N+ L+  +S S  P      LS +  M          P++FTFP V    A   + 
Sbjct: 75  TFLWNSFLKTLFSRSLYP----QFLSFYSLMRSENV----LPNHFTFPMVASSYAHFMMI 126

Query: 119 RQGKQLHGFITKMGF-GSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
           R G  LH    K+GF   +  + ++ + +YS   ++  A ++FD +P RDVV+WT+L+ G
Sbjct: 127 RSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIG 186

Query: 178 LVDHDRPVEAIELFGRMLEAG---VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKR 234
            V +      +E    M   G    + N  T+     AC + G L  GR +HG+V  K  
Sbjct: 187 YVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVV-KNG 245

Query: 235 IECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFL 294
           I C  ++ ++++ MY K G    A              WT+MI   A  G+  + +  F 
Sbjct: 246 IGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFW 305

Query: 295 EMETCNVKPDERTMTAVLSACRNA 318
           EM    V PD   +  +LS   N+
Sbjct: 306 EMLENQVCPDGMVIGCILSGFGNS 329



 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 17/224 (7%)

Query: 78  HHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDC 137
           H+  A+SLF  M+    +    P+  T   VL  C+ L    +G++LH +I + GF  + 
Sbjct: 496 HYEEAISLFDIMIMEDQN----PNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNL 551

Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
            +  AL+ MY+  G L  +RE+FD M ++DV+ W ++I G   +     AIE+F  M E+
Sbjct: 552 PLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEES 611

Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS--TALIDMYAKSGCI 255
            V+ N+ T +S+L ACA +G +  G+ V     + +    K N+   T ++D+  +S  +
Sbjct: 612 NVKPNEITFLSLLSACAHAGLVEEGKNVFA---KMQSYSVKPNLKHYTCMVDLLGRSCNL 668

Query: 256 ESAXXXXXXXXXXX-XXXWTAMISGLASHG-------LCKEAID 291
           E A               W A++S   +H        + K AID
Sbjct: 669 EEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAID 712



 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 148/375 (39%), Gaps = 14/375 (3%)

Query: 9   ALQLHAQILKLGTSNNDAPRNFSKLFTFAAL-SPSGDLNYARLLLTSNPALNSYYYNTML 67
            + LHA   K+G      P N +   +F +L S   ++N A  +    P  +   +  ++
Sbjct: 129 GMNLHALACKVGF----FPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALV 184

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGF 127
             Y  + +       +S     + R       P+  T       C  L     G+ LHG 
Sbjct: 185 IGYVQNGESEMGLECIS----EMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGL 240

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           + K G G    I ++++ MY   G    A + F  + ++D++SWTS+I          + 
Sbjct: 241 VVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDC 300

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
           +  F  MLE  V  +   +  +L    +S  +  G+  HG++  +     +  V  +L+ 
Sbjct: 301 VRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEM-VDNSLLS 359

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY K G +  A              W  MI G    G   + I LF EM+   ++ +   
Sbjct: 360 MYCKFGMLSFA-ERLFQRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVG 418

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
           + + +++C     +     +  ++ K + ++ TI     ++++  +   +  +    N  
Sbjct: 419 IVSAIASCGQLGEINLGRSIHCNVIKGF-VDETISVTNSLIEMYGKCDKMNVSWRIFNR- 476

Query: 368 PMKPDAVLWRTLIWA 382
             + D +LW  LI A
Sbjct: 477 -SERDVILWNALISA 490


>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:874317-871628 | 20130731
          Length = 505

 Score =  204 bits (518), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 226/480 (47%), Gaps = 15/480 (3%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           T S   Q HAQ L      +  P    +     A +  G +++AR L    P  N + +N
Sbjct: 15  THSTVSQCHAQTLL----QSLLPNVILETDLLLAYTKLGLISHARKLFDKMPQRNMHSWN 70

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
            M+ +Y+ +S    +F AL++F    R    GV  PD +T P + K   R+     G   
Sbjct: 71  IMIASYTHNS---MYFDALTVFEAFKRC---GV-LPDCYTLPPLFKISIRIDECCLGWMC 123

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF-DRMPDRDVVSWTSLIDGLVDHDR 183
           HG + K+G+     + N+++  Y   G +  A  +F +    RD  +W  +I G      
Sbjct: 124 HGLVVKLGYEEIVVVNNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGL 183

Query: 184 PVEAIELFGRMLE--AGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNV 241
             EA+  F  ML+   G+E++  T+ S+L AC   G L   ++VHG +      +    +
Sbjct: 184 YSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPI 243

Query: 242 STALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV 301
             ALID Y K G ++ +              WT MIS    HG  +E++ LF +M     
Sbjct: 244 GNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGF 303

Query: 302 KPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           +P+  T+TA+L++C +  L+ +   +F  M   YG+EPT +H+ C+VDL +R G L+EA 
Sbjct: 304 RPNAVTLTAILASCSHCGLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEAL 363

Query: 362 DFMNAMPMKP-DAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASV 420
             +  M        +W  L+  C +H++ +  E       ++  +++ +Y+    +Y S 
Sbjct: 364 QLLERMKSSSVTGSMWGALLAGCVMHQNVKIGEVAAHHLFQLEPNNTSNYVALWGIYQSR 423

Query: 421 GKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKL 480
           G     + +R  M   GL+K PG S I + G  H+F  GD +HP +  I  ++ E+ + L
Sbjct: 424 GMVLGVSTIRGKMRDLGLVKTPGCSWINIAGRAHKFYQGDLSHPLSHIICKRVYEISNTL 483


>Medtr2g019350.1 | PPR containing plant-like protein | HC |
           chr2:6301271-6304315 | 20130731
          Length = 601

 Score =  203 bits (517), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 200/391 (51%), Gaps = 9/391 (2%)

Query: 43  GDLNYARLLLTSNPALNSYY-YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
           G ++ AR +    P  N    +N ++    L SD +       +F   L+R   G+ A  
Sbjct: 158 GRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSF------VFDLFLKRGCSGIRASV 211

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
             T   +L     +     GK LHG+  K+GF  +  ++ ALI MY+  G + +AR++FD
Sbjct: 212 ATTLS-LLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFD 270

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
            + ++DVV W  LI          EA+ L   M + GV+ N +T+V +L   + SG++  
Sbjct: 271 GVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQG 330

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLA 281
            R V  +++E+K +E    + TAL+D+YAK G ++ A              WTA+ISG  
Sbjct: 331 VRYVTSLIEEEK-LELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHG 389

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
            HG    AI LF  ME    +P+E T  A+L+AC +  LV E    F  M + +G  P +
Sbjct: 390 IHGQAINAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWV 449

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
           +H+GC++DLL RAG L EA + + ++P+K DA  WRTL+ AC+VH D +  E +      
Sbjct: 450 EHYGCLIDLLGRAGMLHEAFELIKSLPIKGDATSWRTLLSACRVHGDVKLGECVKDVLSN 509

Query: 402 MGVDDSGSYILASNVYASVGKWSNKAEVREL 432
                    +L S  YA+ G+ S+   ++E+
Sbjct: 510 FYTPHPTDSLLISGTYAAAGRISDLTRMQEM 540



 Score =  155 bits (392), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 184/395 (46%), Gaps = 17/395 (4%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           T++E  Q H  ++K  TS  + P   SKL   +      D+NYA  + T     N + YN
Sbjct: 25  TITEIHQFHCYMIK--TSLTNVPFTLSKLLAASIF----DMNYASTIFTCIQNPNLFMYN 78

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
           TMLR YS+S+       AL +F   LR   +G+   D F+F  V+K C R      G+ +
Sbjct: 79  TMLRGYSVSNSSNK---ALPIF-NKLRNSGNGL---DPFSFIAVMKACGRSFEVGFGRGV 131

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR-DVVSWTSLIDGLVDHDR 183
           HG + K G      + N ++  Y V G +  AR++FD  P+R D+VSW  L+ G V    
Sbjct: 132 HGIVVKSGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSD 191

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
                +LF +   +G+  + AT +S+L A  D G+  +G+ +HG    K    C  NV T
Sbjct: 192 YSFVFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCI-KIGFCCNLNVVT 250

Query: 244 ALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKP 303
           ALIDMYAK+GCI  A              W  +I   A   L +EA+ L   M    VKP
Sbjct: 251 ALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKP 310

Query: 304 DERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           +  T+  +LS    +  ++    V S +++   +E  +     +VD+ A+ G L EA + 
Sbjct: 311 NSSTLVGLLSVYSASGSMQGVRYVTSLIEEE-KLELDVILGTALVDVYAKCGFLDEAMEI 369

Query: 364 MNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
              M  K D   W  +I    +H     A  L  +
Sbjct: 370 FERMENK-DVKSWTAVISGHGIHGQAINAISLFNR 403


>Medtr7g078360.1 | PPR containing plant-like protein | HC |
           chr7:29634869-29632890 | 20130731
          Length = 632

 Score =  203 bits (517), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 213/443 (48%), Gaps = 49/443 (11%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G+L  AR+     P  +   +N ML  Y+    P      + LF  ML   + G   PD 
Sbjct: 199 GNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEE---TIRLFNDML---SPGNVQPDE 252

Query: 103 FTFPFVLKCCARLKLARQGKQL-HGFITKMGFGSDCYI---------------------- 139
            T+  V+  C+ L      + +      K+GF  + ++                      
Sbjct: 253 TTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFE 312

Query: 140 ------------MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
                        NA+I  Y+  GDL  A+ LFD+MP RD VSW S+I G   +    +A
Sbjct: 313 QLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKA 372

Query: 188 IELFGRML--EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTAL 245
           I+LF  M+  E   + ++ T+VSV  AC   G L +G     I+K    I+   +V  +L
Sbjct: 373 IKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILK-VNHIQISISVYNSL 431

Query: 246 IDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE 305
           I+MY++ G ++ A              +  +ISG A HG   E+I+L  +M+   ++PD 
Sbjct: 432 INMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDR 491

Query: 306 RTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMN 365
            T  A+L+AC +A L+ E   +F  +K      P + H+ C++D+L RAG L+EA   + 
Sbjct: 492 ITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQ 546

Query: 366 AMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSN 425
           +MPM+P A ++ +L+ A  +H+  E  E    +  ++   +SG+Y L SN+YAS G+W  
Sbjct: 547 SMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKE 606

Query: 426 KAEVRELMNKKGLIKPPGSSRIE 448
             +VR+ M K+G+ K  G S +E
Sbjct: 607 GDKVRDTMRKQGVKKTTGLSWLE 629



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 10/223 (4%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
            +A +  GDL  A+ L    P  ++  +N+M+  Y+ + +    F A+ LF  M+   + 
Sbjct: 329 ISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGES---FKAIKLFEEMIS--SE 383

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
               PD  T   V   C  L     G      +          + N+LI+MYS  G +  
Sbjct: 384 DSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQD 443

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACAD 215
           A  +F  M  RD+VS+ +LI G  +H   +E+IEL  +M E G+E +  T +++L AC+ 
Sbjct: 444 AVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSH 503

Query: 216 SGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           +G L  G+++   +K        C     +IDM  ++G +E A
Sbjct: 504 AGLLDEGQRLFESIKFPDVDHYAC-----MIDMLGRAGRLEEA 541



 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 39/274 (14%)

Query: 128 ITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEA 187
           + K G+  D Y+ N ++ +Y+ +G +  AR+LFD MPDR V  W  +I G        EA
Sbjct: 110 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 169

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
             LF  M +  +  N  T  +++   A  G L   R     + E+  +            
Sbjct: 170 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS----------- 218

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDER 306
                                    W AM+SG A  G  +E I LF +M    NV+PDE 
Sbjct: 219 -------------------------WNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDET 253

Query: 307 TMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNA 366
           T   V+S+C +      +  +   +  + G  P       ++D+ A+ G L+ A      
Sbjct: 254 TWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQ 313

Query: 367 MPMKP--DAVLWRTLIWACKVHEDTERAERLMKQ 398
           + +     +V W  +I A     D   A+ L  +
Sbjct: 314 LGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDK 347


>Medtr4g087150.1 | PPR containing plant-like protein | HC |
           chr4:34147385-34144072 | 20130731
          Length = 724

 Score =  203 bits (516), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 179/339 (52%), Gaps = 2/339 (0%)

Query: 140 MNALIHMYSVFGDLGVARELFDRMP-DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAG 198
           +N +I +YS  G+L  A +LFD+   +R+ V+W S++ G + +    EA++L+  M    
Sbjct: 369 LNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFL 428

Query: 199 VEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           VE + +T   + RACA   +   G+ +H  + +    E    V TAL+D Y+K G +  A
Sbjct: 429 VEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQE-NVYVGTALVDFYSKCGHLADA 487

Query: 259 XXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNA 318
                         WTA+I+G A HG   EAI  F  M    V P+  T  AVLSAC +A
Sbjct: 488 QRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHA 547

Query: 319 DLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRT 378
            LV E    F  M+  Y I PTI+H+ CVVDLL R+G +KEAE+F+  MP+K D V+W  
Sbjct: 548 GLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGA 607

Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
           L+ A     + E  ER   +   +  +   + +  SN+YA  G+W  K ++R+ +    L
Sbjct: 608 LLNASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLEL 667

Query: 439 IKPPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEMV 477
            K  G S IE++  +H F + D  HP +D I+  ++ + 
Sbjct: 668 RKDQGFSWIELNNNVHLFSVEDTTHPYSDVIYKTVEHIT 706



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 8/220 (3%)

Query: 40  SPSGDLNYA-RLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP 98
           S +G+L+ A +L   +    N   +N+M+  Y  + +   H  AL L++ M R     + 
Sbjct: 377 SKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGE---HSEALKLYVTMRRF----LV 429

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
                TF  + + CA L   +QG+ LH  + K  +  + Y+  AL+  YS  G L  A+ 
Sbjct: 430 EYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQR 489

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
            F  +   +V +WT+LI+G   H    EAI  F  ML+ GV  N AT V+VL AC+ +G 
Sbjct: 490 SFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGL 549

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
           +  G K    ++   RI       T ++D+  +SG ++ A
Sbjct: 550 VDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEA 589



 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 171/413 (41%), Gaps = 65/413 (15%)

Query: 8   EALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTML 67
           + LQ    +L+   S    P   S   + A  + +G L  AR +    P      +NTM+
Sbjct: 18  QKLQFFTTLLE--ASQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMI 75

Query: 68  RAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN-FTFPFVLKCCARLKLARQGKQLHG 126
             YS     T    AL+L  FM     H      N  +F   L  C R      GKQ+H 
Sbjct: 76  SGYSQWGKYTE---ALTLVSFM-----HSSCVKFNEVSFSACLSACTRGGSLFLGKQIHS 127

Query: 127 FITKMGFGSDCYIMNALIHMYS----------VFGDL---------------------GV 155
            + K G+     + +AL+H Y           VF +L                     G 
Sbjct: 128 LLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGD 187

Query: 156 ARELFDRMPDRDVVSWTSLIDGLVDHDRPVE-AIELFGRMLEAG-VEVNDATVVSVLRAC 213
           A E+F++MP RDVV+WT+LI G    +   E A++LFG M  +  V  N+ T+  VLR C
Sbjct: 188 AMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVC 247

Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
           A    L +G+ VHG+   K   +   +VS+AL + Y  S  ++ A               
Sbjct: 248 ARLRILYVGKVVHGLCI-KDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNV 306

Query: 274 T-AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMK 332
             ++I GL S G  KEA  +F  +        ++T+ +        +L+ + Y +    K
Sbjct: 307 ADSLIGGLVSMGRVKEAGMIFYGLR-------DKTLIS-------NNLMIKGYAMSGQFK 352

Query: 333 KRYGI--EPTIQH---FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
           K   +  + +++H      ++ + ++ G L EA    +    + + V W +++
Sbjct: 353 KSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMM 405



 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 158/363 (43%), Gaps = 24/363 (6%)

Query: 56  PALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARL 115
           P  +   + T++  Y+   D      AL LF  M RR +  +P  + FT   VL+ CARL
Sbjct: 196 PVRDVVAWTTLISGYAKREDGCER--ALDLFGCM-RRSSEVLP--NEFTLDCVLRVCARL 250

Query: 116 KLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWT-SL 174
           ++   GK +HG   K GF  D  + +AL   Y V   +  A+ +++ M      +   SL
Sbjct: 251 RILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSL 310

Query: 175 IDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVS---VLRACADSGALSMGRKVHGIVKE 231
           I GLV   R  EA  +F         + D T++S   +++  A SG     +K+     E
Sbjct: 311 IGGLVSMGRVKEAGMIF-------YGLRDKTLISNNLMIKGYAMSGQFKKSKKLF----E 359

Query: 232 KKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAI 290
           K  ++   +++T +I +Y+K+G + E+               W +M+SG   +G   EA+
Sbjct: 360 KMSLKHLTSLNT-MITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEAL 418

Query: 291 DLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDL 350
            L++ M    V+    T + +  AC      ++  ++ + + K    +  +     +VD 
Sbjct: 419 KLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKT-PYQENVYVGTALVDF 477

Query: 351 LARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSY 410
            ++ G L +A+    ++   P+   W  LI     H     A    +  L+ GV  + + 
Sbjct: 478 YSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAAT 536

Query: 411 ILA 413
            +A
Sbjct: 537 FVA 539


>Medtr4g108660.1 | PPR containing plant-like protein | HC |
           chr4:44998985-45001066 | 20130731
          Length = 460

 Score =  202 bits (513), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 212/449 (47%), Gaps = 76/449 (16%)

Query: 4   TTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGD-LNYARLLLTSNPALNSYY 62
           TT+    Q+H  +   G   +  P  F KL    A+S S   LNY+  L    P  +++ 
Sbjct: 21  TTLKTTKQIHTHLYVTGLHTH--PFFFGKLLLNCAVSISDHVLNYSLRLFHHFPNPDTFM 78

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLA-RQG 121
           YNT++R+ S SS P     +L  FI +LR PT     PD+F+F F LK  A    + RQG
Sbjct: 79  YNTLIRSLSHSSTP---LSSLQPFIQLLRHPT---LLPDSFSFAFTLKGIANDGCSKRQG 132

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID----- 176
            QLH    + GF    ++   LI MY+  G    AR++FD M   +VV+W +++      
Sbjct: 133 IQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRC 192

Query: 177 -------GLVDHDRPVEAIELFGRMLEAGVEV----------------NDATVVSVLRAC 213
                  GL +   PV  +  +  ML   V+                 +DA+  +++   
Sbjct: 193 GDVEGAWGLFER-MPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGF 251

Query: 214 ADSG-----------------------------------ALSMGRKVHGIVKEKKRIECK 238
           A SG                                   A   G+ +HG + EK    C 
Sbjct: 252 AKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFM-EKAGFLCI 310

Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLASHGLCKEAIDLFLEME 297
            +V+ ALID Y+K G ++ A               WT+MI+ LA HG   EAI +F EME
Sbjct: 311 VSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHGRADEAIRVFHEME 370

Query: 298 TCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCL 357
              V+PD  T  ++L AC ++ LV +   +FS M+  YGIEP I+H+GC+VDL  RA  L
Sbjct: 371 ESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARL 430

Query: 358 KEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           ++A +F+  MP+ P+ ++WRTL+ AC +H
Sbjct: 431 QKAYEFIRQMPILPNVIIWRTLLGACSIH 459


>Medtr2g071810.1 | PPR containing plant-like protein | HC |
           chr2:30002268-30006207 | 20130731
          Length = 789

 Score =  200 bits (509), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 243/517 (47%), Gaps = 78/517 (15%)

Query: 1   MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
           +++  M+EAL++   +   G S  D     S       L   G ++ AR+L    P  N 
Sbjct: 168 LKIGEMNEALRVFENV---GVSKRDV---VSWSAVVGGLCRDGRIDNARMLFDRMPERNV 221

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
             ++ M+  Y    +     +   LF+ M R    GV   ++ T   ++K C      ++
Sbjct: 222 VSWSAMIDGYM---EKGLFENGFGLFLDMRR---EGVVEVNSTTMTIMIKGCGNCGRVKE 275

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFG----------------------------- 151
           G Q+HG ++++GF     + N +I MYS+FG                             
Sbjct: 276 GIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIY 335

Query: 152 --DLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFG----------------- 192
             ++  A E+F+RMP++D++SWT++I G     R  +A+ELF                  
Sbjct: 336 NNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTLKEKDDFVWTVLISGF 395

Query: 193 --------------RMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
                         RM       N  T+ SVL A A   AL+ G ++H  V  K  +E  
Sbjct: 396 VSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHSHVL-KMNLEYD 454

Query: 239 CNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMET 298
            ++  +LI  YAK G +  A              + ++I+G A +G  +EA+ ++  M+ 
Sbjct: 455 LSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFGEEALSMYKRMQN 514

Query: 299 CNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLK 358
            +++P+  T  AVLSAC +A L+ E + +F+ MK RYGIEP   H+ C+VDLL RAG L 
Sbjct: 515 ESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEADHYACMVDLLGRAGLLD 574

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL-EMGVDDSGSYILASNVY 417
           EA  F+ +MP++P + +W  L+ A   H+  + A +L  QH+ E+   ++  Y++ SN Y
Sbjct: 575 EAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLA-KLAAQHITELEPANATPYVVLSNTY 633

Query: 418 ASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV-DGAL 453
           ++ G+      VR+  N KG+ K PG S I + D AL
Sbjct: 634 SASGQKFEGDLVRKTKNLKGIKKSPGCSWITIKDKAL 670



 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 142/351 (40%), Gaps = 42/351 (11%)

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPV-EAIELFGRMLEAGVE 200
           A++ +Y+  G +  AR+LFD MP+R   ++ ++I G + +   V +A ELF    +    
Sbjct: 66  AMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEV 125

Query: 201 VNDATVVSVLRA---------------------CADSGALSMGRKVHGIVKEKKRIECKC 239
              A ++ +++A                     C  S AL  G    G + E  R+    
Sbjct: 126 SYAAMIMGLVKARKFDLAEKLYREAPHEFRDPVC--SNALINGYLKIGEMNEALRVFENV 183

Query: 240 NVS-------TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDL 292
            VS       +A++    + G I++A              W+AMI G    GL +    L
Sbjct: 184 GVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGL 243

Query: 293 FLEMETCN-VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLL 351
           FL+M     V+ +  TMT ++  C N   V+E   +   +  R G E        ++ + 
Sbjct: 244 FLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHG-LVSRLGFEFGSVLSNTIITMY 302

Query: 352 ARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYI 411
           +  G    A+   + M  K D V W +LI     + + + A  + ++  E    D  S+ 
Sbjct: 303 SLFGYTDMAKKVFSGMGNK-DLVTWNSLISGYIYNNEVDAAYEVFERMPE---KDLISWT 358

Query: 412 LASNVYASVGKWSNKAEVRELMNKK-----GLIKPPGSSRIEVDGALHEFV 457
                +A+ G+     E+ + + +K      ++     S  E + ALH FV
Sbjct: 359 AMIRGFATDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFV 409


>Medtr2g028240.1 | PPR containing plant-like protein | HC |
           chr2:10416867-10418417 | 20130731
          Length = 516

 Score =  199 bits (506), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 221/446 (49%), Gaps = 30/446 (6%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           QLH+Q++K G+ +   P    K       S  G LN +  +       +   +NT+L  +
Sbjct: 79  QLHSQMIKTGSDSGTVP----KTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCF 134

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
                P          I +LR           FT   VLKCCA LK    G+Q+HG +  
Sbjct: 135 LRCGKPDEA-------IRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVA 187

Query: 131 MGFGSDCYIMN-ALIHMYSVFGDLGVARELFDRMPD-RDVVSWTSLIDGLVDHDRPVEAI 188
           MG   D  +++ ALI  YS  G +  A  +F  +   +D +   SL+ G + + R  EA 
Sbjct: 188 MG--RDLVVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAF 245

Query: 189 ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGI-VKEKKRIECK-CNVSTALI 246
           ++        V+ N   + SVL  C++   L  G++VH + V++    E + CNV   L+
Sbjct: 246 KVMSL-----VKPNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNV---LL 297

Query: 247 DMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEM--ETCNVKPD 304
           DMYAK G I  A              WT MI G   +G   EA++LF +M  +   V P+
Sbjct: 298 DMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPN 357

Query: 305 ERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE---AE 361
             T  +VLSAC ++ LV E    F+ MK++YGI+P  +H+ C +D+L RAG ++E   A 
Sbjct: 358 SVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPEHYACFIDILGRAGKIEEVWSAY 417

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVG 421
             M      P A +W +L+ AC + +D ER E   K  L++  + + + +LASN YA++G
Sbjct: 418 QNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAAKSLLQLEPNKASNIVLASNFYAAIG 477

Query: 422 KWSNKAEVRELMNKKGLIKPPGSSRI 447
           +W    E+R +M +KGL+K  G+S I
Sbjct: 478 RWDCVGELRSMMREKGLVKEAGNSWI 503



 Score =  106 bits (264), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 171/381 (44%), Gaps = 59/381 (15%)

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N+++ +Y     P     A +LF+  LRR    +   D+ TF  +L    R      GKQ
Sbjct: 31  NSLITSYIRRGHP---ISAFNLFL-SLRRIRIDL---DSHTFTPLL----RPSPTSLGKQ 79

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           LH  + K G  S      AL+ MYS  G L  + ++FD M  RDVV+W +L+   +   +
Sbjct: 80  LHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGK 139

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVST 243
           P EAI +   M    VE+++ T+ SVL+ CA   AL  GR+VHG+V    R      +ST
Sbjct: 140 PDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGRDLVV--LST 197

Query: 244 ALIDMYAKSGCIESAXXXXXXXXX-XXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           ALID Y+  GC+  A                 +++SG   +G  +EA  +        VK
Sbjct: 198 ALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAFKVM-----SLVK 252

Query: 303 PDERTMTAVLSAC-RNADL----------VREAYM-------VFSDMKKRYG-------- 336
           P+   +T+VL  C   +DL          VR+ +        V  DM  + G        
Sbjct: 253 PNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSV 312

Query: 337 ----IEPTIQHFGCVVDLLARAGCLKEAEDFMNAM-----PMKPDAVLWRTLIWAC---K 384
                +  +  + C++D   R GC  EA +    M      + P++V + +++ AC    
Sbjct: 313 FDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSG 372

Query: 385 VHEDTERAERLMKQHLEMGVD 405
           + E+ ++   +MK+  + G+D
Sbjct: 373 LVEEGKQCFNIMKE--KYGID 391


>Medtr2g024080.1 | PPR containing plant-like protein | HC |
           chr2:8563899-8566215 | 20130731
          Length = 767

 Score =  199 bits (505), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 193/390 (49%), Gaps = 4/390 (1%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P   T   V+  CA+L     GK +HG+I +     D    N+L+ MY+  G L  +  +
Sbjct: 367 PSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIV 426

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           FDRM  RD+VSW +++ G   +    +A  LF  M       +  T+VS+++ CA +G L
Sbjct: 427 FDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQL 486

Query: 220 SMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISG 279
             G+ +HG V       C   V T+L+DMY K G ++SA              W+A+I+G
Sbjct: 487 HPGKWIHGFVIRNGLRPCIL-VDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAG 545

Query: 280 LASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEP 339
              HG  + A+ L+ +     +KP+     ++LS+C +  L+ +   ++  M + +G  P
Sbjct: 546 YGYHGKGETALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVP 605

Query: 340 TIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQH 399
            ++H  C+VDLL RAG ++EA +    M   P   +   ++ AC+ + + E  + +    
Sbjct: 606 NLEHHACMVDLLCRAGKVEEAYNLYKRMFSDPVLDVLGIILDACRANGNKELGDIIANDI 665

Query: 400 LEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMG 459
           +++    +G+Y+  ++ YAS+ KW    EV   M   GL K PG S I++ G +  F   
Sbjct: 666 IKLRPMSAGNYVQLAHCYASINKWEGVGEVWTHMRSLGLRKIPGWSFIDIHGTITTFFTD 725

Query: 460 DYNHP---EADNIFVKLDEMVDKLKKEGYN 486
             +HP   E  N    L E ++K+++   N
Sbjct: 726 HNSHPQFLEIVNTMTILREEMNKMEEVDLN 755



 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 165/339 (48%), Gaps = 10/339 (2%)

Query: 63  YNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGK 122
           +N++L AY+   D       L   + +L+R       P    F  VL         R G+
Sbjct: 236 WNSLLSAYAQIGD-------LCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGR 288

Query: 123 QLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHD 182
            +HG I + GF  D +I  + I MY   G++ VA ++F+R  D+DVV WT++I GLV ++
Sbjct: 289 LVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNE 348

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              +A+ +F +M + G++ +  T+ SV+ ACA  GA ++G+ +HG +  +K +       
Sbjct: 349 NADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHGYILRQK-LSLDTAAH 407

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
            +L+ MYAK G ++ +              W A+++G A +G   +A  LF EM +C+  
Sbjct: 408 NSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQT 467

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PD  T+ +++  C +   +     +      R G+ P I     +VD+  + G L  A+ 
Sbjct: 468 PDSITIVSLVQGCASTGQLHPGKWI-HGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQR 526

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
             N MP + D V W  +I     H   E A RL  + LE
Sbjct: 527 CFNLMPSQ-DLVSWSAIIAGYGYHGKGETALRLYSKFLE 564



 Score =  105 bits (263), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 159/349 (45%), Gaps = 15/349 (4%)

Query: 60  SYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
           ++ YN ++  +S       H   L  +  ML      +P+ D +TFP +LK C+ L L  
Sbjct: 34  THSYNALINRHSTQGA---HRQVLITYTSMLNA---NIPS-DAYTFPSLLKACSFLNLFH 86

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
            G  LH  +   G  +D YI ++LI+ Y  FG   VAR++FD MP+R+VV WT++I    
Sbjct: 87  LGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYS 146

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
                 EA  LF +M   G++ +  T++S+L   ++   +   + +HG       +    
Sbjct: 147 KMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSE---VPYVQCLHGCAIFYGFMS-DL 202

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
           N+  +++++Y K G IE                W +++S  A  G   E + L   M+  
Sbjct: 203 NLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQ 262

Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSD-MKKRYGIEPTIQHFGCVVDLLARAGCLK 358
            ++P  +   +VLS   +   +R   +V    ++  + ++  I+    V+ L  + G + 
Sbjct: 263 GLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYL--KGGNIN 320

Query: 359 EAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDS 407
            A   M    +  D VLW  +I     +E+ ++A  +  Q  + G+  S
Sbjct: 321 VAFK-MFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPS 368


>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr1:50925869-50923259 | 20130731
          Length = 710

 Score =  199 bits (505), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 205/409 (50%), Gaps = 10/409 (2%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G++  ARLLL      +   + T++  Y ++ D      A S  +        GV  P+ 
Sbjct: 264 GEMEEARLLLNGMEEKDVVTWTTLINGYVVNGD------ARSALMLCRSMQLEGVK-PNL 316

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            +   +L  C  L   + GK LH +  +    S+  +  ALI MY+   +  ++ ++F +
Sbjct: 317 VSVASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMK 376

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
              +    W +++ G V +     A++LF  ML   V+ +  T  S+L A A    L   
Sbjct: 377 TSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQA 436

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX--XXXXXXXXXXXWTAMISGL 280
             +H  +  K    CK  V++ L+D+Y+K G +  A                WTA+I   
Sbjct: 437 MNMHCYLV-KLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAY 495

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
             HG  + A+ LF +M     KP+E T T+VL AC +A LV +   +F+ M K+Y + P+
Sbjct: 496 GKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVIPS 555

Query: 341 IQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHL 400
           + H+ C+VDLL RAG L +A + +  MP+  +  +W  L+ AC +HE+ E  E   +   
Sbjct: 556 VDHYTCIVDLLGRAGRLNDAYNLIRTMPITHNHAVWGALLGACVIHENVELGEIAARWTF 615

Query: 401 EMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEV 449
           E+  +++G+Y+L + +YA+VG+W +   VR ++N+ GL K P +S +E+
Sbjct: 616 ELEPENTGNYVLLAKLYAAVGRWRDAERVRNMVNEVGLRKTPANSLVEL 664



 Score =  163 bits (412), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 166/317 (52%), Gaps = 13/317 (4%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           ++SE  +LHA I+  G  ++      SKL T  A       +YA  L    P  N + +N
Sbjct: 27  SLSETKKLHALIITYGLFSSSQLS--SKLATTYAQCHHA--SYASQLFDKLPKRNLFSWN 82

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
           TM+R Y     P     AL++F+ ML     G   PD+FT+P V+K C+ L     G  +
Sbjct: 83  TMMRMYVQMGRP---HDALNMFVEMLHS---GRAMPDHFTYPIVIKACSELLFVDMGVGV 136

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           HG   K GF  + ++ N+L+ MY   G+   AR +F+ M +R VVSW +LI+GL  ++  
Sbjct: 137 HGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRNNCA 196

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
            +A+ ++ RM++ GV V+ ATVVSVL+AC     + +GR+V  +  EK        V  A
Sbjct: 197 EDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKGYWG-NVVVRNA 255

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           L+DMY K G +E A              WT +I+G   +G  + A+ L   M+   VKP+
Sbjct: 256 LLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPN 315

Query: 305 ERTMTAVLSACRNADLV 321
             ++ ++LSAC   DLV
Sbjct: 316 LVSVASLLSAC--GDLV 330



 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 148/313 (47%), Gaps = 21/313 (6%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D  T   VL+ C  LK    G+++     + G+  +  + NAL+ MY   G++  AR L 
Sbjct: 214 DCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLL 273

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           + M ++DVV+WT+LI+G V +     A+ L   M   GV+ N  +V S+L AC D  +L 
Sbjct: 274 NGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLK 333

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGL 280
            G+ +H     ++ IE +  + TALIDMYAK      +              W A++SG 
Sbjct: 334 HGKCLHAWAI-RQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGF 392

Query: 281 ASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPT 340
             + L + A+ LF EM   NV+PD  T  ++L           AY + +D+K+   +   
Sbjct: 393 VHNRLARNAVQLFKEMLLENVQPDSPTFNSLLP----------AYAILADLKQAMNMHCY 442

Query: 341 IQHFG---------CVVDLLARAGCLKEAEDFMNAMPMK-PDAVLWRTLIWACKVHEDTE 390
           +   G          +VD+ ++ G L  A    + +P+K  D ++W  +I A   H   E
Sbjct: 443 LVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGE 502

Query: 391 RAERLMKQHLEMG 403
            A  L  Q ++ G
Sbjct: 503 MAVSLFNQMVQSG 515


>Medtr6g034150.1 | PPR containing plant-like protein | HC |
           chr6:11544927-11542116 | 20130731
          Length = 451

 Score =  198 bits (503), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 193/372 (51%), Gaps = 17/372 (4%)

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
           +S+L+ C D  +L +G++VH  ++  K       +   LI +Y K G ++ A        
Sbjct: 95  LSLLKLCEDLKSLELGKRVHEFLRRSK-FGGNVELCNRLIGLYVKCGSVKDARKVFDKMP 153

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                    MI G   +GL  + + +F +M    V PDE T   VL+ C   D V E  M
Sbjct: 154 DRNVGSLNLMICGYNVNGLGIDGLLVFKQMSQQGVVPDEETFALVLTVCALVDGVEEGLM 213

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV- 385
            F  MK+ YGI P ++H+  VV++   AG L EA +F+  MP++    +W TL     + 
Sbjct: 214 QFESMKE-YGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIEAGVEIWETLRNFATIC 272

Query: 386 -HEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGS 444
             ++T RA  L +++LE   +D    +L   V       ++K  + +   +  +      
Sbjct: 273 CAKNTLRASVLYRRNLER--EDCADELLT--VLDPSKAAADKVPLPQRKKQSAI------ 322

Query: 445 SRIEVDGALHEFVMGDYNHPEADNIFVKLDEMVDKLKKEGYNPKLSEVLLEIDDEEKATQ 504
           + +E    + E+     N P  +   VKL  +  ++++ GY P    VL +ID+EEK   
Sbjct: 323 NMLEEKNRVSEYRC---NMPYKEESDVKLRSLTGQMREAGYVPDTRYVLHDIDEEEKEKA 379

Query: 505 LLHHSEKLALAYGLIRTSQGSKIRIVKNLRSCEDCHEFMKLISKIYQRDIIVRDRIRFHH 564
           L +HSE LA+AYGLI T   + +RI+KNLR C DCH  +K++SKI  R++IVRD  RFHH
Sbjct: 380 LQYHSECLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 439

Query: 565 FKNGDCSCKDYW 576
           FK+G CSC DYW
Sbjct: 440 FKDGKCSCGDYW 451



 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 62/114 (54%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D   F  +LK C  LK    GK++H F+ +  FG +  + N LI +Y   G +  AR++F
Sbjct: 90  DYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVF 149

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
           D+MPDR+V S   +I G   +   ++ + +F +M + GV  ++ T   VL  CA
Sbjct: 150 DKMPDRNVGSLNLMICGYNVNGLGIDGLLVFKQMSQQGVVPDEETFALVLTVCA 203


>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr7:45010556-45008657 | 20130731
          Length = 512

 Score =  198 bits (503), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/307 (37%), Positives = 166/307 (54%), Gaps = 2/307 (0%)

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
            L++ Y     +  AR +FD M +R+VVSWT++I G V + R V+A++LF  M +     
Sbjct: 208 TLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRP 267

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           N  T  SVL ACA S +L MG ++H  +  K  I       T+L+DMYAK G +++A   
Sbjct: 268 NHFTFSSVLDACAGSSSLIMGLQLHPCII-KSGIANDVIWLTSLVDMYAKCGDMDAAFGV 326

Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
                      W A+I G ASHGL   A++ F  M+     PDE T   VLSAC +A LV
Sbjct: 327 FESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT-PDEVTFVNVLSACVHAGLV 385

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
            E    F+DM  +YGI+  ++H+ C+VDL  RAG   EAE+ +  MP +PD VLW  L+ 
Sbjct: 386 EEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLA 445

Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
           AC +H + E  E   ++   +      SY + S +    G WS+  E+R+ M ++G+ K 
Sbjct: 446 ACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQ 505

Query: 442 PGSSRIE 448
              S +E
Sbjct: 506 TAISWVE 512



 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 8/214 (3%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
           +N AR +       N   +  M+  Y  +        AL LF+ M +  T     P++FT
Sbjct: 219 VNKARSVFDDMSERNVVSWTAMISGYVQNK---RFVDALKLFVLMFKTETR----PNHFT 271

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
           F  VL  CA       G QLH  I K G  +D   + +L+ MY+  GD+  A  +F+ + 
Sbjct: 272 FSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIR 331

Query: 165 DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRK 224
           D+++VSW ++I G   H     A+E F RM   G   ++ T V+VL AC  +G +  G K
Sbjct: 332 DKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGTP-DEVTFVNVLSACVHAGLVEEGEK 390

Query: 225 VHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
               +  K  I+ +    + ++D+Y ++G  + A
Sbjct: 391 HFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEA 424



 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 7/227 (3%)

Query: 122 KQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDH 181
           KQ H  + +     +    N ++  Y     +G   +LFD+MP +D VSW  ++ G    
Sbjct: 25  KQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGF-QR 83

Query: 182 DRPVEAI-ELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
            R  E +   F +M  AGV  ND T+ ++LRA   +    + R+VH +            
Sbjct: 84  TRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAFHLGHY-LNVF 142

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
           V ++LI  YA     E+               W A++S     G   +A   F +M   N
Sbjct: 143 VGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQRN 202

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCV 347
           +     + T +++       V +A  VF DM +R  +  T    G V
Sbjct: 203 II----SWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYV 245


>Medtr2g016780.1 | editing factor, putative | HC |
           chr2:5197710-5195940 | 20130731
          Length = 551

 Score =  197 bits (502), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 178/321 (55%), Gaps = 5/321 (1%)

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDR----DVVSWTSLIDGLVDHDRPVEA 187
           G+  + +  NA+I  Y+  GD   A    +RM       DVV+W +LI G   + +  E 
Sbjct: 212 GYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRET 271

Query: 188 IELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALID 247
             +F  ML +G+  N  T+ ++L AC   G++  GR+VHG +  +K  +    +++ALID
Sbjct: 272 FTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFIC-RKGFDANVFIASALID 330

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY+K G ++ A              W AMI      G+   A++LF +M+   ++P+E T
Sbjct: 331 MYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVT 390

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
              +LSAC ++  V +   +F+ MK+ YG+E   +H+ C+VDLL R+G + EA +F+ AM
Sbjct: 391 FACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKIVEAYEFIKAM 450

Query: 368 PMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKA 427
           P++    +    +  CK+H   + A+++ ++ + M ++ SGS++  SN+YA+ G W    
Sbjct: 451 PIQVTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLNGSGSFVTLSNIYAAEGDWEEAG 510

Query: 428 EVRELMNKKGLIKPPGSSRIE 448
            VR++M ++ + K PGSS +E
Sbjct: 511 NVRKVMKERNVNKWPGSSWLE 531



 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 165/370 (44%), Gaps = 44/370 (11%)

Query: 11  QLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAY 70
           Q+HA +L  GT+ N    + SKL      S   DL  A LL  +    N + +N M+   
Sbjct: 35  QIHAMLLTTGTNTNILSLS-SKLV--GMYSSCTDLKSATLLFHNIHKPNVFAFNWMILGM 91

Query: 71  SLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITK 130
             +      +   +LF F L R    +   + FTF  V+K C  L   ++GKQ+HG I +
Sbjct: 92  VYNG-----YFDNALFYFRLMRDIGLIG--NKFTFGIVIKTCVGLMDMKKGKQVHGMICE 144

Query: 131 MGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
           MG  +D  I N LI MY   G +  A  +FD M +RDV SWTS+I G  +  R  EA+ L
Sbjct: 145 MGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVL 204

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F RM   G E ND T  +++   A    L   +K  G ++  +                 
Sbjct: 205 FERMKMEGYEPNDFTWNAII---ATYARLGDSKKAFGFMERMQ----------------- 244

Query: 251 KSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTA 310
           K G I                 W A+ISG A +   +E   +F EM    + P++ T+ A
Sbjct: 245 KEGFIPDV------------VAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAA 292

Query: 311 VLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMK 370
           +L AC +   V+    V   + ++ G +  +     ++D+ ++ G LK+A +  + +  K
Sbjct: 293 LLPACGSVGSVKWGREVHGFICRK-GFDANVFIASALIDMYSKCGSLKDARNVFDKIQCK 351

Query: 371 PDAVLWRTLI 380
            +   W  +I
Sbjct: 352 -NVASWNAMI 360



 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 21/260 (8%)

Query: 6   MSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGD-LNYARLLLTSNPALNSYYYN 64
           + EAL L  ++   G   ND   N + + T+A L  S     +   +       +   +N
Sbjct: 198 IEEALVLFERMKMEGYEPNDFTWN-AIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWN 256

Query: 65  TMLRAYSLSSDPTHHF-HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
            ++  ++      H F    ++F  ML     G+  P+  T   +L  C  +   + G++
Sbjct: 257 ALISGFA----QNHQFRETFTVFREML---VSGI-CPNQVTIAALLPACGSVGSVKWGRE 308

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLID-----GL 178
           +HGFI + GF ++ +I +ALI MYS  G L  AR +FD++  ++V SW ++ID     G+
Sbjct: 309 VHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGM 368

Query: 179 VDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK 238
           VD      A+ELF +M E G++ N+ T   +L AC+ SG++  G ++  ++KE   +E  
Sbjct: 369 VD-----SALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEIC 423

Query: 239 CNVSTALIDMYAKSGCIESA 258
                 ++D+  +SG I  A
Sbjct: 424 KEHYACIVDLLCRSGKIVEA 443



 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 12/249 (4%)

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNA-LIHMYSVFGDLGVARELFDRM 163
           F   L+ C + K  + GKQ+H  +   G  ++   +++ L+ MYS   DL  A  LF  +
Sbjct: 17  FALYLQKCLKSKALKPGKQIHAMLLTTGTNTNILSLSSKLVGMYSSCTDLKSATLLFHNI 76

Query: 164 PDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
              +V ++  +I G+V +     A+  F  M + G+  N  T   V++ C     +  G+
Sbjct: 77  HKPNVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCVGLMDMKKGK 136

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
           +VHG++ E   +     +   LIDMY K G ++ A              WT+MI G  + 
Sbjct: 137 QVHGMICEMGLMN-DVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNT 195

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G  +EA+ LF  M+    +P++ T  A+++           Y    D KK +G    +Q 
Sbjct: 196 GRIEEALVLFERMKMEGYEPNDFTWNAIIA----------TYARLGDSKKAFGFMERMQK 245

Query: 344 FGCVVDLLA 352
            G + D++A
Sbjct: 246 EGFIPDVVA 254


>Medtr3g011920.1 | PPR containing plant-like protein | HC |
           chr3:3106602-3104668 | 20130731
          Length = 627

 Score =  197 bits (502), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 193/407 (47%), Gaps = 36/407 (8%)

Query: 87  IFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHM 146
           I++  R       P+ FTF  VL    RL     GKQ+HG   K    S+ ++ +AL+ +
Sbjct: 145 IYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDL 204

Query: 147 YSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR----------------------- 183
           Y     +  A++ F+     +VVS+T+LI G +   R                       
Sbjct: 205 YVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFNEMPERNVISWNAMV 264

Query: 184 --------PVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRI 235
                     EA++ F  ML  G   N++T    + A ++  +L  GR  H       + 
Sbjct: 265 GGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGFGRSFHACA---IKF 321

Query: 236 ECKCN--VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLF 293
             K N  V  +LI  YAK G ++ +              W A+I G A +G   EAI LF
Sbjct: 322 LGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAISLF 381

Query: 294 LEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLAR 353
             M +  +KP++ ++  +L AC +A LV E ++ F+  +         +H+ C+VDLLAR
Sbjct: 382 ERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPNLLKPEHYACMVDLLAR 441

Query: 354 AGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
           +G   EA++F+  MP  P    W+ ++  C++H + E  E   K  L +  DD  SY++ 
Sbjct: 442 SGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNIELGELAAKNILALDPDDVSSYVMM 501

Query: 414 SNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGALHEFVMGD 460
           SN +++ G+WS+ A +R  + +KG+ + PGSS IEV G +H F+  D
Sbjct: 502 SNAHSAAGRWSDVARLRTEIQEKGMKRIPGSSWIEVKGKVHAFLKAD 548



 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 16/247 (6%)

Query: 42  SGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPD 101
           SG    A  +    P  N   +N M+      S   H+  A+  FI MLR        P+
Sbjct: 239 SGRFEDALRVFNEMPERNVISWNAMVGG---CSKIGHNEEAVKFFIDMLREGF----IPN 291

Query: 102 NFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFD 161
             TFP  +   + +     G+  H    K     + ++ N+LI  Y+  G +  +  +FD
Sbjct: 292 ESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFD 351

Query: 162 RMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSM 221
           ++  R+VVSW ++I G   + R  EAI LF RM   G++ N  +++ +L AC  +G +  
Sbjct: 352 KICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDE 411

Query: 222 GRKVHGIVKEKKRIEC----KCNVSTALIDMYAKSG-CIESAXXXXXXXXXXXXXXWTAM 276
           G     +   K RIE     K      ++D+ A+SG   E+               W A+
Sbjct: 412 GF----LYFNKARIESPNLLKPEHYACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAI 467

Query: 277 ISGLASH 283
           + G   H
Sbjct: 468 LGGCQIH 474



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 7/210 (3%)

Query: 155 VARELFDRMPDRDVVSW-TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRAC 213
           VA  +FD MP+   V   T +I       R  +AI LF RML + +  N+ T  +VL   
Sbjct: 111 VACNMFDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTS 170

Query: 214 ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXW 273
              G + +G+++HG    K  +     V +AL+D+Y K   IE A              +
Sbjct: 171 TRLGKVGVGKQIHGCAI-KTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSY 229

Query: 274 TAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKK 333
           T +I G    G  ++A+ +F EM   NV     +  A++  C       EA   F DM  
Sbjct: 230 TTLIGGYLKSGRFEDALRVFNEMPERNVI----SWNAMVGGCSKIGHNEEAVKFFIDM-L 284

Query: 334 RYGIEPTIQHFGCVVDLLARAGCLKEAEDF 363
           R G  P    F C +   +    L     F
Sbjct: 285 REGFIPNESTFPCAISAASNIASLGFGRSF 314


>Medtr8g035960.1 | PPR containing plant-like protein | HC |
           chr8:13156718-13159093 | 20130731
          Length = 791

 Score =  197 bits (502), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 196/376 (52%), Gaps = 8/376 (2%)

Query: 100 PDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVAREL 159
           P++ TF  +L       + ++G  +HG   K    S+  + N+LI MY+ F  +  ++++
Sbjct: 384 PNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKI 443

Query: 160 FDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGAL 219
           F+ +  +  +SW +LI G   +    EA   F   ++  ++ N  T  SVL A A +  +
Sbjct: 444 FEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKE-IKPNQYTFGSVLNAIAAAEDI 502

Query: 220 SM--GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
           S+  G++ H  +  K  +     V+ AL+DMY K G I  +              WT MI
Sbjct: 503 SLKHGQRCHSHLI-KLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMI 561

Query: 278 SGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           S  A HG  +  + L+ E+E      D  T  +VL+AC    +V   +++F  M K++ I
Sbjct: 562 SAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSI 621

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
           EPT +H+  +VD+L R G L EAE+ M+ +P  P   + ++L+ +CK+H + E AER++ 
Sbjct: 622 EPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVD 681

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRIEVDGA----L 453
             ++M    SG Y+L +N+YA  G W   AEVR+ M  +G+ K  G S ++V       L
Sbjct: 682 SLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGFSWVDVANVDSLHL 741

Query: 454 HEFVMGDYNHPEADNI 469
           H F  GD +HPE++ I
Sbjct: 742 HGFSSGDKSHPESETI 757



 Score =  130 bits (326), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 175/397 (44%), Gaps = 30/397 (7%)

Query: 9   ALQLHAQILKLGTSNNDAPRNFSKLFTFAAL----SPSGDLNYARLLLTSNPALNSYYYN 64
            LQLH+ ++K G           ++F   AL    S  G L+ A  +       +   +N
Sbjct: 206 GLQLHSLVVKCGFG--------CEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWN 257

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
            ML  Y+   +  +   A+ LF  M+R         D+ +    +  C   K    GKQ+
Sbjct: 258 AMLSGYAQEGE-CYGLEAVLLFGNMVREGM----LLDHVSLTGAISACGYTKNLEFGKQI 312

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
           HG   K+G+G+   + N LI  YS    L  A+ +F  M  R+VVSWT+LI   +D +  
Sbjct: 313 HGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLIS--IDEEN- 369

Query: 185 VEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTA 244
              + LF  M   GV  ND T + +L A      +  G  VHG+   K  +  + NVS +
Sbjct: 370 --VVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCL-KSCLSSEQNVSNS 426

Query: 245 LIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPD 304
           LI MYAK   I+ +              W A+ISG A +GLCKEA   FL      +KP+
Sbjct: 427 LITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLS-AIKEIKPN 485

Query: 305 ERTMTAVLSACRNADLV--REAYMVFSDM-KKRYGIEPTIQHFGCVVDLLARAGCLKEAE 361
           + T  +VL+A   A+ +  +      S + K     +P +   G ++D+  + G + E++
Sbjct: 486 QYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVA--GALLDMYGKRGNINESQ 543

Query: 362 DFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQ 398
              N  P K     W  +I A   H D E    L K+
Sbjct: 544 RVFNETPEKTQ-FSWTGMISAYARHGDYESVMSLYKE 579



 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 23/311 (7%)

Query: 80  FHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYI 139
           F ALS+F    + P   +   D  T     K C    +   G Q+HGF+   GF S   +
Sbjct: 66  FQALSVFKNQTQFPF--LQNIDEVTLALSFKACRGEFIL--GAQIHGFVVATGFVSRVTV 121

Query: 140 MNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGV 199
            N+L+ MY   G   +A  +F+ +   D+VSW +++ G    ++ V+A+     M   GV
Sbjct: 122 SNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGF---EKSVDALNFACFMHLNGV 178

Query: 200 EVNDATVVSVLRACADSG-----ALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGC 254
             +  T  + L  C D           G ++H +V  K    C+  +  AL+ MY++ G 
Sbjct: 179 VFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVV-KCGFGCEVFIGNALVTMYSRWGG 237

Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCK--EAIDLFLEMETCNVKPDERTMTAVL 312
           ++ A              W AM+SG A  G C   EA+ LF  M    +  D  ++T  +
Sbjct: 238 LDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAI 297

Query: 313 SAC---RNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPM 369
           SAC   +N +  ++ +     + ++ G    +     ++   ++   L++A+     M  
Sbjct: 298 SACGYTKNLEFGKQIH----GLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSA 353

Query: 370 KPDAVLWRTLI 380
           + + V W TLI
Sbjct: 354 R-NVVSWTTLI 363


>Medtr3g026690.1 | PPR containing plant-like protein | HC |
           chr3:8195048-8190900 | 20130731
          Length = 944

 Score =  197 bits (501), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 193/404 (47%), Gaps = 9/404 (2%)

Query: 45  LNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFT 104
             YA  L       +   +NT++  ++   DP        L + M  R       PD+ T
Sbjct: 451 FTYAMTLFNRMQIKDIVVWNTLINGFTKYGDP-------HLALEMFNRLQLSGILPDSGT 503

Query: 105 FPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMP 164
              +   CA +     G  LHG I K GF SD ++  AL+ MY+  G L     LF    
Sbjct: 504 MVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTK 563

Query: 165 D-RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGR 223
             +D VSW  +I G + +    EAI  F RM    V  N  T V++L A +    L    
Sbjct: 564 HVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAM 623

Query: 224 KVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASH 283
             H  +     + C   +  +LIDMYAK G +  +              W AM+S  A H
Sbjct: 624 AFHTCIIRMGFLSCTL-IGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMH 682

Query: 284 GLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQH 343
           G  + A+ LF  M+  NV+ D  +  +VLSACR++ L++E + +F+ M +++ +EP+++H
Sbjct: 683 GQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEH 742

Query: 344 FGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMG 403
           + C+VDLL  AG   E    +N M  +PDA +W  L+ ACK+H +    E  +   L++ 
Sbjct: 743 YACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLE 802

Query: 404 VDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSSRI 447
             +   +++ S++YA  G+W++    R  +N  GL K PG S +
Sbjct: 803 PRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846



 Score =  136 bits (343), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 162/371 (43%), Gaps = 12/371 (3%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G+L  AR L  S    +   ++  L A   +  P      LS+F  M          PD 
Sbjct: 348 GELKKARELFLSLEGRDLVAWSAFLSALVETGYPRE---VLSIFQVMQYEGL----KPDK 400

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
                ++  C  +     GK +H +  K    SD  ++  L+ MY  F     A  LF+R
Sbjct: 401 AILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNR 460

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M  +D+V W +LI+G   +  P  A+E+F R+  +G+  +  T+V +  ACA    L +G
Sbjct: 461 MQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLG 520

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXX-XXXWTAMISGLA 281
             +HG + EK   E   +V  AL+DMYAK G + S                W  MI+G  
Sbjct: 521 TCLHGGI-EKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYL 579

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
            +G   EAI  F  M+  NV+P+  T   +L A     ++REA M F     R G     
Sbjct: 580 HNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREA-MAFHTCIIRMGFLSCT 638

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
                ++D+ A+ G L+ +E   + M  K D + W  ++ A  +H   E A  L     E
Sbjct: 639 LIGNSLIDMYAKCGQLRYSEKCFHEMENK-DTISWNAMLSAYAMHGQGELAVALFSVMQE 697

Query: 402 MGVD-DSGSYI 411
             V  DS SYI
Sbjct: 698 SNVRVDSVSYI 708



 Score =  132 bits (333), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 161/340 (47%), Gaps = 22/340 (6%)

Query: 47  YARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFH-ALSLFIFMLRRPTHGVPAPDNFTF 105
           +   L   NP+L    YN+ ++AYS      HHFH A++L+  +L+        PD FTF
Sbjct: 53  HTHFLQIKNPSL--ILYNSFIKAYS----KFHHFHKAINLYHTILKIGL----KPDKFTF 102

Query: 106 PFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPD 165
            FVLK C       +G  ++  I   G   D YI  +LI M+   G L  AR +FD+MP 
Sbjct: 103 NFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPV 162

Query: 166 RDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKV 225
           +D V W ++I GL     P EA+E+F RM   G EV+  +++++  A +  G +   + +
Sbjct: 163 KDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSI 222

Query: 226 HGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGL 285
           HG V   +R  C   VS +LIDMY K G + SA              W  M++G   +G 
Sbjct: 223 HGYV--VRRSICGV-VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGC 279

Query: 286 CKEAIDLFLEMETCNVKPDERTMTAVLSA---CRNADLVREAYMVFSDMKKRYGIEPTIQ 342
             E + L  +M   NVK ++  +   L      R+ +  +E Y    +   + G+   I 
Sbjct: 280 YFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIY----NYALQMGLMSDIV 335

Query: 343 HFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWA 382
               +V + A+ G LK+A +   ++  + D V W   + A
Sbjct: 336 VATPIVCMYAKCGELKKARELFLSLEGR-DLVAWSAFLSA 374



 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 2/261 (0%)

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
           +GK+++ +  +MG  SD  +   ++ MY+  G+L  ARELF  +  RD+V+W++ +  LV
Sbjct: 317 KGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALV 376

Query: 180 DHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKC 239
           +   P E + +F  M   G++ + A +  ++  C +   + +G+ +H     K  +E   
Sbjct: 377 ETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMH-CYAIKADMESDI 435

Query: 240 NVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETC 299
           ++ T L+ MY +      A              W  +I+G   +G    A+++F  ++  
Sbjct: 436 SMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLS 495

Query: 300 NVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKE 359
            + PD  TM  + SAC   D +     +   ++K  G E  I     ++D+ A+ G L  
Sbjct: 496 GILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKS-GFESDIHVKVALMDMYAKCGSLCS 554

Query: 360 AEDFMNAMPMKPDAVLWRTLI 380
            E          D V W  +I
Sbjct: 555 VERLFLLTKHVKDEVSWNVMI 575


>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr3:40854327-40856914 | 20130731
          Length = 616

 Score =  197 bits (500), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/314 (38%), Positives = 174/314 (55%), Gaps = 9/314 (2%)

Query: 138 YIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEA 197
           ++ ++++  Y   GD+  A  +F R+P R++  W S+I G V +    +A+E FG M   
Sbjct: 213 FVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVD 272

Query: 198 GVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIES 257
           G E ++ TVVSVL ACA  G L  G+++H ++ E K I     V + LIDMYAK G + +
Sbjct: 273 GFEPDEFTVVSVLSACAQLGDLDAGKQMHHMI-ECKGIAVNQFVLSGLIDMYAKCGDLVN 331

Query: 258 AXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN 317
           A              W AMI+G A +G C E ++    M+  N++ D  T   VLSAC +
Sbjct: 332 ARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSACAH 391

Query: 318 ADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWR 377
             L+ EA  V S M++ YGIE  I+H+GC+VDLL RAG LKEA + +  MPMKP+  +  
Sbjct: 392 GGLMSEALEVISKMEE-YGIEMGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLG 450

Query: 378 TLIWACKVHEDTERAERLMKQHLEMGVDDSGSY----ILASNVYASVGKWSNKAEVRELM 433
            +I AC +H D + AE++MK    +G D +       +L SN+YA+  KW     +R  M
Sbjct: 451 AMIGACWIHSDMKMAEQVMKM---IGADSAACVNSHNVLLSNIYAASEKWEKAEMIRSSM 507

Query: 434 NKKGLIKPPGSSRI 447
              G  K PG S I
Sbjct: 508 VDGGSEKIPGYSSI 521



 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 12/218 (5%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPA--P 100
           GD+  A  +    P  N   +N+M+  Y  +        A             GV    P
Sbjct: 226 GDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFG---------EMGVDGFEP 276

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELF 160
           D FT   VL  CA+L     GKQ+H  I   G   + ++++ LI MY+  GDL  AR +F
Sbjct: 277 DEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVF 336

Query: 161 DRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALS 220
           +   +R+V  W ++I G   + +  E +E   RM E+ + ++  T ++VL ACA  G +S
Sbjct: 337 ESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSACAHGGLMS 396

Query: 221 MGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESA 258
              +V   ++E   IE        ++D+  ++G ++ A
Sbjct: 397 EALEVISKMEEYG-IEMGIRHYGCMVDLLGRAGKLKEA 433



 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 168/413 (40%), Gaps = 53/413 (12%)

Query: 63  YNTMLRAYSLSSDPTHHF---HALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLAR 119
           +N    ++S+ ++ T+      AL L+       TH     D    P +LK C       
Sbjct: 14  FNPSNWSHSIRNNSTNQASLKRALVLYKQTRHDTTH-----DPTVIPQLLKACDSHPFLP 68

Query: 120 QGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLV 179
             K LH    K G   D +I  A++  Y+  G +  AR++FD MP+R+VV+W ++I G +
Sbjct: 69  YVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYL 128

Query: 180 DHDRPVEAI---------------ELFGRMLEAG-------------VEVNDATVVSVL- 210
            +     A+               ++ G     G              E+ D  + +V+ 
Sbjct: 129 RNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMV 188

Query: 211 RACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXX 270
              A  G +   R+V  ++ E+        V ++++  Y K G +  A            
Sbjct: 189 DGYAKKGEMEDAREVFELMPERNYF-----VWSSMVCGYCKKGDVMEAEAIFRRIPVRNL 243

Query: 271 XXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRN-ADLVREAYMVFS 329
             W +MI+G   +G  ++A++ F EM     +PDE T+ +VLSAC    DL  +A     
Sbjct: 244 EIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDL--DAGKQMH 301

Query: 330 DMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV---- 385
            M +  GI         ++D+ A+ G L  A     +   + +   W  +I    V    
Sbjct: 302 HMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNER-NVFCWNAMIAGFAVNGQC 360

Query: 386 HEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
           +E  E  +R+ + ++ +   D+ ++I   +  A  G  S   EV   M + G+
Sbjct: 361 NEVLEYLDRMQESNIRL---DAVTFITVLSACAHGGLMSEALEVISKMEEYGI 410


>Medtr8g075460.1 | PPR containing plant-like protein | HC |
           chr8:31911388-31913406 | 20130731
          Length = 672

 Score =  197 bits (500), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 169/317 (53%), Gaps = 9/317 (2%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D  ++N +I +Y   G +  A+E+F+ MP++ ++SW S++ GL  +  P EA++ F  M 
Sbjct: 360 DAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMN 419

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHG----IVKEKKRIECKCNVSTALIDMYAK 251
           +  V+++  +  SV+ ACA   +L +G ++ G    +  E  +I C     T+L+D Y K
Sbjct: 420 KLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIIC-----TSLVDFYCK 474

Query: 252 SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAV 311
            G +E                W  M+ G A++G   EA+ LF EM    V+P   T T +
Sbjct: 475 CGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGI 534

Query: 312 LSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKP 371
           LSAC +  LV E   +F  MK  Y I P I+H+ C+VDL AR GC  EA   +  MP + 
Sbjct: 535 LSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQA 594

Query: 372 DAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRE 431
           DA +W +++  C  H +    +   ++ +++   +SG+YI  SN+ A+   W   AEVRE
Sbjct: 595 DANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDWEGSAEVRE 654

Query: 432 LMNKKGLIKPPGSSRIE 448
           LM  K + K PG S ++
Sbjct: 655 LMRNKNVQKIPGCSWMD 671



 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 8/243 (3%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G +  A+ +  S P      +N++L   + ++ P+    AL  F  M +         D 
Sbjct: 375 GRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSE---ALDTFSMMNKLDV----KMDK 427

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
           F+F  V+  CA       G+QL G    +G  SD  I  +L+  Y   G + + R++FD 
Sbjct: 428 FSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDG 487

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMG 222
           M   D VSW +++ G   +   +EA+ LF  M  +GV  +  T   +L AC   G +  G
Sbjct: 488 MIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEG 547

Query: 223 RKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI-ESAXXXXXXXXXXXXXXWTAMISGLA 281
           R +   +K    I       + ++D++A+ GC  E+               W +++ G  
Sbjct: 548 RDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCV 607

Query: 282 SHG 284
           SHG
Sbjct: 608 SHG 610



 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 176/446 (39%), Gaps = 72/446 (16%)

Query: 5   TMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYN 64
           T+ EA QLH  +LK G  ++        L  +   S  G L+ A  L    P  N + +N
Sbjct: 9   TIREARQLHLSLLKTGNLHSSVITTNRLLQLY---SRRGSLHDASKLFDEMPQPNPFSWN 65

Query: 65  TMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQL 124
           T++ A+    +  H   +L LF        H +P   ++++                   
Sbjct: 66  TLIEAHI---NLGHRNKSLELF--------HAMPHKTHYSW------------------- 95

Query: 125 HGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRP 184
                           N ++   S  GDL  A+ LF+ MP ++ + W S+I G   H  P
Sbjct: 96  ----------------NLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYP 139

Query: 185 VEAIELFGRMLEAGVEV--NDATVVS-VLRACADSGALSMGRKVH------GIVKEKKRI 235
             ++ LF  M    +E    DA V+S V  ACAD  AL  G++VH      G   E+ ++
Sbjct: 140 RNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKV 199

Query: 236 ECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLE 295
            C     +++++ Y K G ++SA               +A++SG A+ G   +A  +F  
Sbjct: 200 LC-----SSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDN 254

Query: 296 METCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKR--YGIEPTIQHFGCVVDLLAR 353
                V P      +++S   +     EA  +F+ M++   +G    + +   +   L  
Sbjct: 255 ----KVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLN 310

Query: 354 AGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILA 413
              +K+  D    +    D V+  TL+ A   +   +      K   E+ V D+      
Sbjct: 311 VELVKQMHDHAFKIGATHDIVVASTLLDA---YSKCQHPHDSCKLFHELKVYDAILLNTM 367

Query: 414 SNVYASVGKWSNKAEVRELMNKKGLI 439
             VY + G+  +  EV   M  K LI
Sbjct: 368 ITVYCNCGRVEDAKEVFNSMPNKTLI 393


>Medtr8g479320.2 | PPR containing plant-like protein | HC |
           chr8:33809079-33805443 | 20130731
          Length = 498

 Score =  195 bits (496), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 182/348 (52%), Gaps = 3/348 (0%)

Query: 100 PDNFTFPFVLKCC-ARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
           P+ FT   V+  C  +  +      LH  + K GF +  +++++L+  Y+ +G +  A  
Sbjct: 145 PNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVL 204

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           LF+   ++D V + ++I G   +    +A++LF  M E  +   D T+ S+L AC+    
Sbjct: 205 LFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAM 264

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           L  GR+VH +V  K   E    V++ LIDMY+K G I+ A              WT+MI 
Sbjct: 265 LLQGRQVHSLVI-KMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIM 323

Query: 279 GLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           G A  G   EA++LF  + T   + PD    TAVL+AC +A  + +    F+ M   YG+
Sbjct: 324 GYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGL 383

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
            P I  + C++DL AR G L++A D M  MP  P+ ++W + + ACK++ D E       
Sbjct: 384 SPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAAI 443

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
           Q ++M   ++  Y+  +++Y + G W+  +EVR LM ++   KPPG S
Sbjct: 444 QLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKPPGWS 491



 Score =  116 bits (290), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 11/318 (3%)

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N  +R +S S+       +LS    ++ +PT        +     L  CA+      G Q
Sbjct: 15  NVYIRKHSKSASTCQALESLSRMNGLIEKPT-------KYVLCNALSSCAKTLNWHLGIQ 67

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +H ++ + G+  + ++ +AL+  Y+    +  A ++F  M   D VSWTSLI G   + +
Sbjct: 68  IHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQ 127

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRAC-ADSGALSMGRKVHGIVKEKKRIECKCNVS 242
             +A+ LF  ML   +  N  T+ SV+ AC   +G L     +H  V  K+  +    V 
Sbjct: 128 GRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVI-KQGFDTSSFVI 186

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           ++L+D YA  G I+ A              +  MISG   +   ++A+ LF+EM   N+ 
Sbjct: 187 SSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMS 246

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           P + T++++LSAC +  ++ +   V S +  + G E  +     ++D+ ++ G + EA+ 
Sbjct: 247 PTDHTLSSILSACSSLAMLLQGRQVHS-LVIKMGSERNVYVASTLIDMYSKGGDIDEAQC 305

Query: 363 FMNAMPMKPDAVLWRTLI 380
            ++    K + VLW ++I
Sbjct: 306 VLDQTS-KKNTVLWTSMI 322



 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 16/302 (5%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G ++ A LL       ++  YNTM+  Y       +   AL LF+ M  +      +P +
Sbjct: 197 GQIDDAVLLFNETSEKDTVIYNTMISGYC---QNLYSEDALKLFVEMREKNM----SPTD 249

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   +L  C+ L +  QG+Q+H  + KMG   + Y+ + LI MYS  GD+  A+ + D+
Sbjct: 250 HTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQ 309

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVND-ATVVSVLRACADSGALSM 221
              ++ V WTS+I G     R +EA+ELF  +L     + D     +VL AC  +G +  
Sbjct: 310 TSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDK 369

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGL 280
           G +    +     +    ++   LID+YA++G +  A               W++ +S  
Sbjct: 370 GEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSAC 429

Query: 281 ASHG---LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
             +G   L +EA    ++ME CN  P   T+  + +      L  EA  V S M++R   
Sbjct: 430 KIYGDVELGREAAIQLIKMEPCNAAP-YLTLAHIYTT---KGLWNEASEVRSLMQQRVKR 485

Query: 338 EP 339
           +P
Sbjct: 486 KP 487


>Medtr8g479320.1 | PPR containing plant-like protein | HC |
           chr8:33809124-33805421 | 20130731
          Length = 498

 Score =  195 bits (496), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 182/348 (52%), Gaps = 3/348 (0%)

Query: 100 PDNFTFPFVLKCC-ARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
           P+ FT   V+  C  +  +      LH  + K GF +  +++++L+  Y+ +G +  A  
Sbjct: 145 PNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVL 204

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           LF+   ++D V + ++I G   +    +A++LF  M E  +   D T+ S+L AC+    
Sbjct: 205 LFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAM 264

Query: 219 LSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMIS 278
           L  GR+VH +V  K   E    V++ LIDMY+K G I+ A              WT+MI 
Sbjct: 265 LLQGRQVHSLVI-KMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIM 323

Query: 279 GLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
           G A  G   EA++LF  + T   + PD    TAVL+AC +A  + +    F+ M   YG+
Sbjct: 324 GYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGL 383

Query: 338 EPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMK 397
            P I  + C++DL AR G L++A D M  MP  P+ ++W + + ACK++ D E       
Sbjct: 384 SPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAAI 443

Query: 398 QHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
           Q ++M   ++  Y+  +++Y + G W+  +EVR LM ++   KPPG S
Sbjct: 444 QLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKPPGWS 491



 Score =  116 bits (290), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 11/318 (3%)

Query: 64  NTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQ 123
           N  +R +S S+       +LS    ++ +PT        +     L  CA+      G Q
Sbjct: 15  NVYIRKHSKSASTCQALESLSRMNGLIEKPT-------KYVLCNALSSCAKTLNWHLGIQ 67

Query: 124 LHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDR 183
           +H ++ + G+  + ++ +AL+  Y+    +  A ++F  M   D VSWTSLI G   + +
Sbjct: 68  IHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQ 127

Query: 184 PVEAIELFGRMLEAGVEVNDATVVSVLRAC-ADSGALSMGRKVHGIVKEKKRIECKCNVS 242
             +A+ LF  ML   +  N  T+ SV+ AC   +G L     +H  V  K+  +    V 
Sbjct: 128 GRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVI-KQGFDTSSFVI 186

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           ++L+D YA  G I+ A              +  MISG   +   ++A+ LF+EM   N+ 
Sbjct: 187 SSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMS 246

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           P + T++++LSAC +  ++ +   V S +  + G E  +     ++D+ ++ G + EA+ 
Sbjct: 247 PTDHTLSSILSACSSLAMLLQGRQVHS-LVIKMGSERNVYVASTLIDMYSKGGDIDEAQC 305

Query: 363 FMNAMPMKPDAVLWRTLI 380
            ++    K + VLW ++I
Sbjct: 306 VLDQTS-KKNTVLWTSMI 322



 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 16/302 (5%)

Query: 43  GDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDN 102
           G ++ A LL       ++  YNTM+  Y       +   AL LF+ M  +      +P +
Sbjct: 197 GQIDDAVLLFNETSEKDTVIYNTMISGYC---QNLYSEDALKLFVEMREKNM----SPTD 249

Query: 103 FTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDR 162
            T   +L  C+ L +  QG+Q+H  + KMG   + Y+ + LI MYS  GD+  A+ + D+
Sbjct: 250 HTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQ 309

Query: 163 MPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVND-ATVVSVLRACADSGALSM 221
              ++ V WTS+I G     R +EA+ELF  +L     + D     +VL AC  +G +  
Sbjct: 310 TSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDK 369

Query: 222 GRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXX-XXXXXXXWTAMISGL 280
           G +    +     +    ++   LID+YA++G +  A               W++ +S  
Sbjct: 370 GEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSAC 429

Query: 281 ASHG---LCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGI 337
             +G   L +EA    ++ME CN  P   T+  + +      L  EA  V S M++R   
Sbjct: 430 KIYGDVELGREAAIQLIKMEPCNAAP-YLTLAHIYTT---KGLWNEASEVRSLMQQRVKR 485

Query: 338 EP 339
           +P
Sbjct: 486 KP 487


>Medtr5g025580.1 | PPR containing plant-like protein | HC |
           chr5:10385696-10382561 | 20130731
          Length = 767

 Score =  194 bits (493), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 193/368 (52%), Gaps = 8/368 (2%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           AL  F+ M + P+      D+ T   VL   A ++L  QGK LH    K  FGSD  + N
Sbjct: 405 ALETFMLMRQGPSFNY---DSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQN 461

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
           +LI MY    D+  AR++F      ++ +W  +I  L  +    EA+ELF R L+   + 
Sbjct: 462 SLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELF-RHLQ--FKP 518

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           N+ T+VSVL AC   G L  G++VHG    +   +    +S AL+D+Y+  G +++A   
Sbjct: 519 NEFTIVSVLSACTRIGVLIHGKQVHGYTF-RYGYQQNSFISAALVDLYSTCGRLDNAVKV 577

Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
                      W +MI+   +HG  ++AI+LF EM    +K  + T  ++LSAC ++ LV
Sbjct: 578 FRHSQKSESA-WNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLV 636

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
            +    +  M ++YGI+P  +H   VV++LAR+G + EA  F   +     + +W  L+ 
Sbjct: 637 NQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLS 696

Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
            C  H + E  +++ ++  EM   + G YI  +N+Y + G W +  ++R+ ++ +GL K 
Sbjct: 697 VCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDLRQYIHDQGLRKC 756

Query: 442 PGSSRIEV 449
            G S I+V
Sbjct: 757 AGYSLIDV 764



 Score =  112 bits (281), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 5/317 (1%)

Query: 101 DNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE-- 158
           D+ T   V+   + LK   QG+ +H    K G   D  + NALI+MY+  GD+  +    
Sbjct: 9   DSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSEC 68

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           LF+ M  +DVVSW S++ G + +    +++  F RM  +    +  ++   + AC+  G 
Sbjct: 69  LFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGE 128

Query: 219 LSMGRKVHGI-VKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMI 277
           L+ G  +HG  +K   +     +V+ +LI +Y++   ++ A              W AM+
Sbjct: 129 LAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMM 188

Query: 278 SGLASHGLCKEAIDLFLEMETCN-VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYG 336
            G AS+    EA DL +EM+T    +PD  T+T +L  C    L RE   +     +R+ 
Sbjct: 189 EGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHM 248

Query: 337 IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLM 396
           +   +     ++D+ ++   +++AE   ++   + D V W  +I     ++  E+A+ L 
Sbjct: 249 VPDHLPLRNGLIDMYSKCNVVEKAELLFHSTA-QIDLVSWNAMISGYSQNKYYEKAQNLF 307

Query: 397 KQHLEMGVDDSGSYILA 413
           K+ L  G + S S + A
Sbjct: 308 KELLCCGQNCSSSTVFA 324



 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 153/374 (40%), Gaps = 21/374 (5%)

Query: 90  LRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYI--MNALIHMY 147
            RR        D+ +    +  C+ L     G+ +HG   K+G+  + ++   N+LI +Y
Sbjct: 101 FRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLY 160

Query: 148 SVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVND-ATV 206
           S    + VA  +F  M  +D+VSW ++++G   ++   EA +L   M   G    D  T+
Sbjct: 161 SQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTL 220

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
            ++L  CA+      GR +HG    +  +     +   LIDMY+K   +E A        
Sbjct: 221 TTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTA 280

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYM 326
                 W AMISG + +   ++A +LF E+  C       T+ A+LS+C +A+ +     
Sbjct: 281 QIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKS 340

Query: 327 VFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVH 386
           V     K   +  T+     ++ +   +G L      +       D   W T+I  C   
Sbjct: 341 VHIWQLKSGFLNHTLL-VNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRG 399

Query: 387 EDTERAER---LMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL----I 439
           +  + A     LM+Q      D     I   NV ++V      A +  L   K L    +
Sbjct: 400 DQFQEALETFMLMRQGPSFNYDS----ITLVNVLSAV------ANIELLNQGKSLHSLAL 449

Query: 440 KPPGSSRIEVDGAL 453
           K P  S   V  +L
Sbjct: 450 KSPFGSDTRVQNSL 463



 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 13/336 (3%)

Query: 12  LHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYS 71
           +H Q +KLG  +N      + L +  +   + D+  A  +       +   +N M+  Y+
Sbjct: 135 IHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDV--AETVFREMAYKDIVSWNAMMEGYA 192

Query: 72  LSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
            S++  H       F  M+   T G   PD  T   +L  CA L L R+G+ +HG+  + 
Sbjct: 193 -SNENIHE-----AFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRR 246

Query: 132 GFGSDCY-IMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIEL 190
               D   + N LI MYS    +  A  LF      D+VSW ++I G   +    +A  L
Sbjct: 247 HMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNL 306

Query: 191 FGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYA 250
           F  +L  G   + +TV ++L +C  + +L+ G+ VH I + K        +  +L+ MY 
Sbjct: 307 FKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVH-IWQLKSGFLNHTLLVNSLMQMYI 365

Query: 251 KSGCIESAXXXXXXXXXXX-XXXWTAMISGLASHGLCKEAIDLFLEM-ETCNVKPDERTM 308
            SG + S                W  +I G       +EA++ F+ M +  +   D  T+
Sbjct: 366 NSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITL 425

Query: 309 TAVLSACRNADLVREAYMVFS-DMKKRYGIEPTIQH 343
             VLSA  N +L+ +   + S  +K  +G +  +Q+
Sbjct: 426 VNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQN 461


>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr5:9142979-9147043 | 20130731
          Length = 878

 Score =  194 bits (492), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 183/336 (54%), Gaps = 1/336 (0%)

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
           N +I  Y+  G++  A E+F+ M  R+V+SW SLI G + +   ++A++    M + G +
Sbjct: 394 NTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKK 453

Query: 201 VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXX 260
            + +T    L +CA+  AL +G+++H ++ +   I     VS ALI MYAK G ++SA  
Sbjct: 454 PDQSTFACSLSSCANLAALQVGKQLHELILKSGYIN-DLFVSNALIAMYAKCGGVQSAEK 512

Query: 261 XXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADL 320
                       W ++ISG A +G   EA   F +M +    PDE T   +LSAC +A L
Sbjct: 513 VFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGL 572

Query: 321 VREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLI 380
             +   +F  M + + IEP  +H+ C+VDLL R G L+EA + +  M +K +A LW +L+
Sbjct: 573 TNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLL 632

Query: 381 WACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIK 440
            AC+VH++ E  +    + LE+   ++ +YI  SN++A  G+W +   +R LM ++   K
Sbjct: 633 AACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGK 692

Query: 441 PPGSSRIEVDGALHEFVMGDYNHPEADNIFVKLDEM 476
            PG S IEV   +  FV  D      ++I + L+ +
Sbjct: 693 LPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTL 728



 Score = 94.0 bits (232), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 191/458 (41%), Gaps = 70/458 (15%)

Query: 39  LSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVP 98
            + +G ++ AR L       N   +NTM+  Y L ++     H   LF  M  R      
Sbjct: 58  FAKNGRVSDARQLFDKMSQRNLVSWNTMIAGY-LHNNMVEEAH--KLFDLMAER------ 108

Query: 99  APDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARE 158
             DNF++  ++ C  R  +  + ++L   +      + C+  NA+I  Y+  G    A +
Sbjct: 109 --DNFSWALMITCYTRKGMLEKARELFELVPDK-LDTACW--NAMIAGYAKKGRFDDAEK 163

Query: 159 LFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGA 218
           +F++MP +D+VS+ S++ G   + +   A++ F RM E  V   +  V   +  C    A
Sbjct: 164 VFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSA 223

Query: 219 LSMGRKV-----------------HG-IVKEKK---RIECKCNVS-TALIDMYAKSGCIE 256
             +  K+                 HG IV+ +K   R+ CK  VS  A+I  Y +   I+
Sbjct: 224 WELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQID 283

Query: 257 SAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR 316
            A              WT MI+G    G   EA +++ +M   +V      M+ ++   R
Sbjct: 284 EAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGR 343

Query: 317 NADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLA---RAGCLKEAEDFMNAMPMKPDA 373
               + EA  VFS + KR  I        C   ++A   ++G + EA +    MP+K +A
Sbjct: 344 ----IDEASQVFSQLNKRDAI--------CWNSMIAGYCQSGRMSEALNLFRQMPVK-NA 390

Query: 374 VLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELM 433
           V W T+I       + +RA  + +    MGV +  S+      +   G + +  +   LM
Sbjct: 391 VSWNTMISGYAQAGEMDRATEIFE---AMGVRNVISWNSLITGFLQNGLYLDALKSLVLM 447

Query: 434 NKKGLIKPPGSSR-------------IEVDGALHEFVM 458
            ++G  K P  S              ++V   LHE ++
Sbjct: 448 GQEG--KKPDQSTFACSLSSCANLAALQVGKQLHELIL 483



 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 24/247 (9%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSD---PTHHFHAL--------- 83
            A    SG ++ A  L    P  N+  +NTM+  Y+ + +    T  F A+         
Sbjct: 366 IAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWN 425

Query: 84  SLFIFMLRRPTH------------GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKM 131
           SL    L+   +                PD  TF   L  CA L   + GKQLH  I K 
Sbjct: 426 SLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKS 485

Query: 132 GFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELF 191
           G+ +D ++ NALI MY+  G +  A ++F  +   D++SW SLI G   +    EA   F
Sbjct: 486 GYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAF 545

Query: 192 GRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAK 251
            +M   G   ++ T + +L AC+ +G  + G  +   + E   IE      + L+D+  +
Sbjct: 546 EQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGR 605

Query: 252 SGCIESA 258
            G +E A
Sbjct: 606 MGRLEEA 612



 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 127/296 (42%), Gaps = 26/296 (8%)

Query: 141 NALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVE 200
           N+++ +++  G +  AR+LFD+M  R++VSW ++I G + ++   EA +LF  M E    
Sbjct: 52  NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAE---- 107

Query: 201 VNDATVVSVLRAC-ADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAX 259
             D    +++  C    G L   R++  +V +K    C      A+I  YAK G  + A 
Sbjct: 108 -RDNFSWALMITCYTRKGMLEKARELFELVPDKLDTAC----WNAMIAGYAKKGRFDDAE 162

Query: 260 XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNAD 319
                        + +M++G   +G    A+  F  M   NV      +   ++ C   D
Sbjct: 163 KVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNC---D 219

Query: 320 LVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTL 379
           L   A+ +F  +      +P    +  ++   AR G + EA    + MP K + V W  +
Sbjct: 220 L-GSAWELFEKIP-----DPNAVSWVTMLCGFARHGKIVEARKLFDRMPCK-NVVSWNAM 272

Query: 380 IWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNK 435
           I A       + A +L K   E    D  S+    N Y  VGK     E RE+ N+
Sbjct: 273 IAAYVQDLQIDEAVKLFK---ETPYKDCVSWTTMINGYVRVGKLD---EAREVYNQ 322



 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 13/246 (5%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           DC     +I+ Y   G L  ARE++++MP +DV + T+L+ GL+ + R  EA ++F ++ 
Sbjct: 296 DCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLN 355

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS-TALIDMYAKSGC 254
           +      ++ +    ++   S AL++ R+          +  K  VS   +I  YA++G 
Sbjct: 356 KRDAICWNSMIAGYCQSGRMSEALNLFRQ----------MPVKNAVSWNTMISGYAQAGE 405

Query: 255 IESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
           ++ A              W ++I+G   +GL  +A+   + M     KPD+ T    LS+
Sbjct: 406 MDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSS 465

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C N   ++    +   + K   I         ++ + A+ G ++ AE     +    D +
Sbjct: 466 CANLAALQVGKQLHELILKSGYINDLFVS-NALIAMYAKCGGVQSAEKVFKDIE-GVDLI 523

Query: 375 LWRTLI 380
            W +LI
Sbjct: 524 SWNSLI 529


>Medtr3g063220.1 | PPR containing plant-like protein | HC |
           chr3:28610294-28607607 | 20130731
          Length = 546

 Score =  192 bits (489), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 200/360 (55%), Gaps = 16/360 (4%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           A++L+  M+     GV  PD FTFP VLK C  + L   G+++H  + + GF  D +++N
Sbjct: 198 AIALYFQMVEE---GV-EPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLN 253

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
           AL+ MYS  GD+  AR++F++M  RD VSW S++ G V H   VEAI +F +M+  G + 
Sbjct: 254 ALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKP 313

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           +  ++ ++L + +   +L +G ++HG V  ++ +E   +++ +LI  Y+K G ++ A   
Sbjct: 314 DYFSISAILTSVS---SLDVGVQIHGWVI-RQGVEWNLSIANSLIIAYSKHGRLDKARSI 369

Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
                      W ++IS    H    EAI  F +ME     PD+ T  ++LSAC +  LV
Sbjct: 370 FNLMPERDVVSWNSIISSHCKH---PEAISYFEKMEEAGEVPDKITFVSLLSACAHLGLV 426

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV---LWRT 378
            +   +F+ M ++Y I+P ++H+GC+V+L  RAG +++A   +  + M  +AV   LW  
Sbjct: 427 NDGERLFALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSII--VRMDSEAVGPTLWGA 484

Query: 379 LIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGL 438
           L++AC +H +    E    +  E+  D+  +++L   +Y   G+  +   +R +M  +GL
Sbjct: 485 LLYACLLHGNVTIGEISANKLFELEPDNEHNFVLLMKIYEKAGRLEDMERIRMMMVDRGL 544



 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 169/376 (44%), Gaps = 26/376 (6%)

Query: 76  PTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGS 135
           P   F AL   +  L          D   +  +L+ C R      G  LH  I       
Sbjct: 85  PQTKFQALEQVLNDLEASLEKGIKIDPEIYASLLETCYRFGAIHHGIWLHRLIPPALLHR 144

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVS--WTSLIDGLVDHDRPVEAIELFGR 193
           +  I + L+ +Y+ FG +  A +LFD+M  RD+ +  W SLI G  +     +AI L+ +
Sbjct: 145 NVGISSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQ 204

Query: 194 MLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN------VSTALID 247
           M+E GVE +  T   VL+ C   G + +G +VH       R   +C       V  AL+D
Sbjct: 205 MVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVH-------RHVVRCGFWDDGFVLNALVD 257

Query: 248 MYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERT 307
           MY+K G I  A              W +M++G   HGL  EAI++F +M     KPD  +
Sbjct: 258 MYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFS 317

Query: 308 MTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAM 367
           ++A+L++  + D+  + +        R G+E  +     ++   ++ G L +A    N M
Sbjct: 318 ISAILTSVSSLDVGVQIH----GWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLM 373

Query: 368 PMKPDAVLWRTLIWA-CKVHEDTERAERLMKQHLEMG-VDDSGSYILASNVYASVGKWSN 425
           P + D V W ++I + CK  E     E++     E G V D  +++   +  A +G  ++
Sbjct: 374 PER-DVVSWNSIISSHCKHPEAISYFEKME----EAGEVPDKITFVSLLSACAHLGLVND 428

Query: 426 KAEVRELMNKKGLIKP 441
              +  LM +K  IKP
Sbjct: 429 GERLFALMCEKYKIKP 444


>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900455-37904049 | 20130731
          Length = 654

 Score =  192 bits (489), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D    N++I  +S  GDL   +E F+ MP ++++SW S+I G   ++    AIELF +M 
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
             G   +  T+ S+L        L +G+++H  V   K +     ++ +LI MY++ G I
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVT--KTVVPDLPINNSLITMYSRCGEI 455

Query: 256 ESAX-XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
             A               W AMI G A HG   +A++LF  M+   ++P   T  +VL+A
Sbjct: 456 GDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNA 515

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C +A LV E    F+ M   YGIEP ++HF  +VD+L R G L+EA D +  MP+KPD  
Sbjct: 516 CAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKA 575

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           +W  L+ AC+VH + + A+   K  + +  + S  Y L  N+YA +G+W +   VR LM 
Sbjct: 576 VWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALME 635

Query: 435 KKGLIKPPGSSRIE 448
           +  + K  G S I+
Sbjct: 636 ENNVKKQAGYSWID 649



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 46/293 (15%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
            +  S  GDL   +    + P  N   +N+++  Y  + D   +  A+ LF  M  +   
Sbjct: 346 ISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNED---YKGAIELFSQMQLKGER 402

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
               PD  T   +L     L     GKQ+H F+TK     D  I N+LI MYS  G++G 
Sbjct: 403 ----PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGD 457

Query: 156 ARELFDRMP-DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
           AR +F+ M   +DV++W ++I G   H    +A+ELF RM    ++    T +SVL ACA
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACA 517

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
            +G +  G++    +     IE +     +L+D+                          
Sbjct: 518 HAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI-------------------------- 551

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVREA 324
                L   G  +EA+DL + M    VKPD+    A+L ACR   N DL + A
Sbjct: 552 -----LGRQGQLQEAMDLIVNMP---VKPDKAVWGALLGACRVHSNVDLAQVA 596



 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 91/440 (20%), Positives = 180/440 (40%), Gaps = 55/440 (12%)

Query: 5   TMSEALQLHAQILKLGT---SNNDAPRNFSKLFT-FAALSPSGDLNYARLLLTSNPALNS 60
            +++ LQL   I    +   +N+  P++  +L    + L  +G L  AR L  S    N+
Sbjct: 10  NITKILQLAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNT 69

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK---CCARLKL 117
             +N+M+  Y    +           I   R+    +P  D  ++  ++     C   + 
Sbjct: 70  VTWNSMITGYVQRRE-----------IAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRF 118

Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
             +G++L   + +     DC   N +I  Y+  G +  A E+F+ MP+R+VVS  ++++G
Sbjct: 119 VEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNG 174

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
            + +     A+  F +M E     + A++  ++     +G L M  ++  +V+     + 
Sbjct: 175 FLLNGDVDSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEI--LVEYGNEGDE 228

Query: 238 KCNVSTA---LIDMYAKSGCIESAX-------------XXXXXXXXXXXXXWTAMISGLA 281
           K ++  A   LI  Y + G +E A                           W +M+    
Sbjct: 229 KDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYV 288

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
             G    A +LF  M    V+ D  +   V+        + EA  +F +M       P +
Sbjct: 289 KAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEASKLFLEMPI-----PDV 339

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
             +  ++   ++ G LK  ++F   MP K + + W ++I   + +ED + A  L  Q ++
Sbjct: 340 LSWNSIISGFSQIGDLKRVKEFFENMPHK-NLISWNSVIAGYEKNEDYKGAIELFSQ-MQ 397

Query: 402 MGVDDSGSYILASNVYASVG 421
           +  +    + L+S +  S G
Sbjct: 398 LKGERPDRHTLSSILSVSTG 417


>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900455-37904049 | 20130731
          Length = 654

 Score =  192 bits (489), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D    N++I  +S  GDL   +E F+ MP ++++SW S+I G   ++    AIELF +M 
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
             G   +  T+ S+L        L +G+++H  V   K +     ++ +LI MY++ G I
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVT--KTVVPDLPINNSLITMYSRCGEI 455

Query: 256 ESAX-XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
             A               W AMI G A HG   +A++LF  M+   ++P   T  +VL+A
Sbjct: 456 GDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNA 515

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C +A LV E    F+ M   YGIEP ++HF  +VD+L R G L+EA D +  MP+KPD  
Sbjct: 516 CAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKA 575

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           +W  L+ AC+VH + + A+   K  + +  + S  Y L  N+YA +G+W +   VR LM 
Sbjct: 576 VWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALME 635

Query: 435 KKGLIKPPGSSRIE 448
           +  + K  G S I+
Sbjct: 636 ENNVKKQAGYSWID 649



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 46/293 (15%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
            +  S  GDL   +    + P  N   +N+++  Y  + D   +  A+ LF  M  +   
Sbjct: 346 ISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNED---YKGAIELFSQMQLKGER 402

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
               PD  T   +L     L     GKQ+H F+TK     D  I N+LI MYS  G++G 
Sbjct: 403 ----PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGD 457

Query: 156 ARELFDRMP-DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
           AR +F+ M   +DV++W ++I G   H    +A+ELF RM    ++    T +SVL ACA
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACA 517

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
            +G +  G++    +     IE +     +L+D+                          
Sbjct: 518 HAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI-------------------------- 551

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVREA 324
                L   G  +EA+DL + M    VKPD+    A+L ACR   N DL + A
Sbjct: 552 -----LGRQGQLQEAMDLIVNMP---VKPDKAVWGALLGACRVHSNVDLAQVA 596



 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 91/440 (20%), Positives = 180/440 (40%), Gaps = 55/440 (12%)

Query: 5   TMSEALQLHAQILKLGT---SNNDAPRNFSKLFT-FAALSPSGDLNYARLLLTSNPALNS 60
            +++ LQL   I    +   +N+  P++  +L    + L  +G L  AR L  S    N+
Sbjct: 10  NITKILQLAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNT 69

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK---CCARLKL 117
             +N+M+  Y    +           I   R+    +P  D  ++  ++     C   + 
Sbjct: 70  VTWNSMITGYVQRRE-----------IAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRF 118

Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
             +G++L   + +     DC   N +I  Y+  G +  A E+F+ MP+R+VVS  ++++G
Sbjct: 119 VEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNG 174

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
            + +     A+  F +M E     + A++  ++     +G L M  ++  +V+     + 
Sbjct: 175 FLLNGDVDSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEI--LVEYGNEGDE 228

Query: 238 KCNVSTA---LIDMYAKSGCIESAX-------------XXXXXXXXXXXXXWTAMISGLA 281
           K ++  A   LI  Y + G +E A                           W +M+    
Sbjct: 229 KDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYV 288

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
             G    A +LF  M    V+ D  +   V+        + EA  +F +M       P +
Sbjct: 289 KAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEASKLFLEMPI-----PDV 339

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
             +  ++   ++ G LK  ++F   MP K + + W ++I   + +ED + A  L  Q ++
Sbjct: 340 LSWNSIISGFSQIGDLKRVKEFFENMPHK-NLISWNSVIAGYEKNEDYKGAIELFSQ-MQ 397

Query: 402 MGVDDSGSYILASNVYASVG 421
           +  +    + L+S +  S G
Sbjct: 398 LKGERPDRHTLSSILSVSTG 417


>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900455-37904066 | 20130731
          Length = 654

 Score =  192 bits (489), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D    N++I  +S  GDL   +E F+ MP ++++SW S+I G   ++    AIELF +M 
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
             G   +  T+ S+L        L +G+++H  V   K +     ++ +LI MY++ G I
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVT--KTVVPDLPINNSLITMYSRCGEI 455

Query: 256 ESAX-XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
             A               W AMI G A HG   +A++LF  M+   ++P   T  +VL+A
Sbjct: 456 GDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNA 515

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C +A LV E    F+ M   YGIEP ++HF  +VD+L R G L+EA D +  MP+KPD  
Sbjct: 516 CAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKA 575

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           +W  L+ AC+VH + + A+   K  + +  + S  Y L  N+YA +G+W +   VR LM 
Sbjct: 576 VWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALME 635

Query: 435 KKGLIKPPGSSRIE 448
           +  + K  G S I+
Sbjct: 636 ENNVKKQAGYSWID 649



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 46/293 (15%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
            +  S  GDL   +    + P  N   +N+++  Y  + D   +  A+ LF  M  +   
Sbjct: 346 ISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNED---YKGAIELFSQMQLKGER 402

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
               PD  T   +L     L     GKQ+H F+TK     D  I N+LI MYS  G++G 
Sbjct: 403 ----PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGD 457

Query: 156 ARELFDRMP-DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
           AR +F+ M   +DV++W ++I G   H    +A+ELF RM    ++    T +SVL ACA
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACA 517

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
            +G +  G++    +     IE +     +L+D+                          
Sbjct: 518 HAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI-------------------------- 551

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVREA 324
                L   G  +EA+DL + M    VKPD+    A+L ACR   N DL + A
Sbjct: 552 -----LGRQGQLQEAMDLIVNMP---VKPDKAVWGALLGACRVHSNVDLAQVA 596



 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 91/440 (20%), Positives = 180/440 (40%), Gaps = 55/440 (12%)

Query: 5   TMSEALQLHAQILKLGT---SNNDAPRNFSKLFT-FAALSPSGDLNYARLLLTSNPALNS 60
            +++ LQL   I    +   +N+  P++  +L    + L  +G L  AR L  S    N+
Sbjct: 10  NITKILQLAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNT 69

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK---CCARLKL 117
             +N+M+  Y    +           I   R+    +P  D  ++  ++     C   + 
Sbjct: 70  VTWNSMITGYVQRRE-----------IAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRF 118

Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
             +G++L   + +     DC   N +I  Y+  G +  A E+F+ MP+R+VVS  ++++G
Sbjct: 119 VEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNG 174

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
            + +     A+  F +M E     + A++  ++     +G L M  ++  +V+     + 
Sbjct: 175 FLLNGDVDSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEI--LVEYGNEGDE 228

Query: 238 KCNVSTA---LIDMYAKSGCIESAX-------------XXXXXXXXXXXXXWTAMISGLA 281
           K ++  A   LI  Y + G +E A                           W +M+    
Sbjct: 229 KDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYV 288

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
             G    A +LF  M    V+ D  +   V+        + EA  +F +M       P +
Sbjct: 289 KAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEASKLFLEMPI-----PDV 339

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
             +  ++   ++ G LK  ++F   MP K + + W ++I   + +ED + A  L  Q ++
Sbjct: 340 LSWNSIISGFSQIGDLKRVKEFFENMPHK-NLISWNSVIAGYEKNEDYKGAIELFSQ-MQ 397

Query: 402 MGVDDSGSYILASNVYASVG 421
           +  +    + L+S +  S G
Sbjct: 398 LKGERPDRHTLSSILSVSTG 417


>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900455-37904049 | 20130731
          Length = 654

 Score =  192 bits (489), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D    N++I  +S  GDL   +E F+ MP ++++SW S+I G   ++    AIELF +M 
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
             G   +  T+ S+L        L +G+++H  V   K +     ++ +LI MY++ G I
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVT--KTVVPDLPINNSLITMYSRCGEI 455

Query: 256 ESAX-XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
             A               W AMI G A HG   +A++LF  M+   ++P   T  +VL+A
Sbjct: 456 GDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNA 515

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C +A LV E    F+ M   YGIEP ++HF  +VD+L R G L+EA D +  MP+KPD  
Sbjct: 516 CAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKA 575

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           +W  L+ AC+VH + + A+   K  + +  + S  Y L  N+YA +G+W +   VR LM 
Sbjct: 576 VWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALME 635

Query: 435 KKGLIKPPGSSRIE 448
           +  + K  G S I+
Sbjct: 636 ENNVKKQAGYSWID 649



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 46/293 (15%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
            +  S  GDL   +    + P  N   +N+++  Y  + D   +  A+ LF  M  +   
Sbjct: 346 ISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNED---YKGAIELFSQMQLKGER 402

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
               PD  T   +L     L     GKQ+H F+TK     D  I N+LI MYS  G++G 
Sbjct: 403 ----PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGD 457

Query: 156 ARELFDRMP-DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
           AR +F+ M   +DV++W ++I G   H    +A+ELF RM    ++    T +SVL ACA
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACA 517

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
            +G +  G++    +     IE +     +L+D+                          
Sbjct: 518 HAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI-------------------------- 551

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVREA 324
                L   G  +EA+DL + M    VKPD+    A+L ACR   N DL + A
Sbjct: 552 -----LGRQGQLQEAMDLIVNMP---VKPDKAVWGALLGACRVHSNVDLAQVA 596



 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 91/440 (20%), Positives = 180/440 (40%), Gaps = 55/440 (12%)

Query: 5   TMSEALQLHAQILKLGT---SNNDAPRNFSKLFT-FAALSPSGDLNYARLLLTSNPALNS 60
            +++ LQL   I    +   +N+  P++  +L    + L  +G L  AR L  S    N+
Sbjct: 10  NITKILQLAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNT 69

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLK---CCARLKL 117
             +N+M+  Y    +           I   R+    +P  D  ++  ++     C   + 
Sbjct: 70  VTWNSMITGYVQRRE-----------IAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRF 118

Query: 118 ARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDG 177
             +G++L   + +     DC   N +I  Y+  G +  A E+F+ MP+R+VVS  ++++G
Sbjct: 119 VEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNG 174

Query: 178 LVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIEC 237
            + +     A+  F +M E     + A++  ++     +G L M  ++  +V+     + 
Sbjct: 175 FLLNGDVDSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEI--LVEYGNEGDE 228

Query: 238 KCNVSTA---LIDMYAKSGCIESAX-------------XXXXXXXXXXXXXWTAMISGLA 281
           K ++  A   LI  Y + G +E A                           W +M+    
Sbjct: 229 KDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYV 288

Query: 282 SHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTI 341
             G    A +LF  M    V+ D  +   V+        + EA  +F +M       P +
Sbjct: 289 KAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEASKLFLEMPI-----PDV 339

Query: 342 QHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLE 401
             +  ++   ++ G LK  ++F   MP K + + W ++I   + +ED + A  L  Q ++
Sbjct: 340 LSWNSIISGFSQIGDLKRVKEFFENMPHK-NLISWNSVIAGYEKNEDYKGAIELFSQ-MQ 397

Query: 402 MGVDDSGSYILASNVYASVG 421
           +  +    + L+S +  S G
Sbjct: 398 LKGERPDRHTLSSILSVSTG 417


>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr8:37592279-37594828 | 20130731
          Length = 572

 Score =  191 bits (485), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 166/328 (50%), Gaps = 1/328 (0%)

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
           A+I  +   G +  A  LF ++  +D   W  +I G   + R  EA+ LF +M+  G++ 
Sbjct: 223 AMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQP 282

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXX 261
           +D T VS+  ACA    L  GR+ + +   K  +    +VS AL+ MY+K G I  +   
Sbjct: 283 DDLTFVSLFTACASLALLDEGRQTNALAI-KHGLNSDLSVSNALVTMYSKCGEIVISELA 341

Query: 262 XXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLV 321
                      W  +I+  A HGL   A   F  M T  V PD  T   +LSAC  A  V
Sbjct: 342 FDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKV 401

Query: 322 REAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIW 381
            E   +F  M  +YGI P  +H+ CVVD+++RAG L  A   +  MP + DA +W   + 
Sbjct: 402 DETVNLFDLMVHKYGILPRSEHYSCVVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLV 461

Query: 382 ACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKP 441
            C +H + +  E   +  L +   +SG+Y++ SN+YA+ GKW +   +R LM ++G+ K 
Sbjct: 462 GCNIHSNVKLGELAARSILNLDPYNSGAYVMMSNIYAAAGKWKDVNRMRVLMKEQGIKKQ 521

Query: 442 PGSSRIEVDGALHEFVMGDYNHPEADNI 469
              S +++   L  FV GD +HP  D+I
Sbjct: 522 TAYSWMQIGNKLQCFVGGDPSHPNIDDI 549



 Score = 86.7 bits (213), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 158/410 (38%), Gaps = 85/410 (20%)

Query: 34  FTFAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRP 93
               ALS +G++  AR L       +   YN+ML AY  +    H   + SLF       
Sbjct: 34  LNITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQH---SKSLF------- 83

Query: 94  THGVPAPDNFTFPFVLKCCAR----------------LKLARQGKQLHGFITKMGFGSDC 137
            + +P  +  ++  ++  C +                  +A     + GF+ KMG   + 
Sbjct: 84  -NSIPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNVASYNAMMSGFV-KMGRVEEA 141

Query: 138 Y-----IMNALIHMYSVF--------GDLGV--ARELFDRMPDRDVVSWTSLIDGLVDHD 182
                 I    +  Y+V         G  G+  AR LFD MP R+ VSWT +I GLV++ 
Sbjct: 142 KKVFEEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNEVSWTVMISGLVENG 201

Query: 183 RPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVS 242
              EA E+F RM +  V                                           
Sbjct: 202 LHEEAWEVFVRMPQKNVVA----------------------------------------F 221

Query: 243 TALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVK 302
           TA+I  + K G I+ A              W  MI+G A +G  +EA++LF +M    ++
Sbjct: 222 TAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQ 281

Query: 303 PDERTMTAVLSACRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAED 362
           PD+ T  ++ +AC +  L+ E     + +  ++G+   +     +V + ++ G +  +E 
Sbjct: 282 PDDLTFVSLFTACASLALLDEGRQT-NALAIKHGLNSDLSVSNALVTMYSKCGEIVISEL 340

Query: 363 FMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYIL 412
             + +   PD V W T+I A   H   +RA       +  GV   G   L
Sbjct: 341 AFDQIS-HPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFL 389



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 4/172 (2%)

Query: 82  ALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMN 141
           AL+LF  M+R        PD+ TF  +   CA L L  +G+Q +    K G  SD  + N
Sbjct: 268 ALNLFSQMVRTGMQ----PDDLTFVSLFTACASLALLDEGRQTNALAIKHGLNSDLSVSN 323

Query: 142 ALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEV 201
           AL+ MYS  G++ ++   FD++   D+VSW ++I     H     A   F  M+ AGV  
Sbjct: 324 ALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTP 383

Query: 202 NDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSG 253
           +  T +++L AC  +G +     +  ++  K  I  +    + ++D+ +++G
Sbjct: 384 DGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEHYSCVVDVMSRAG 435



 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 45/280 (16%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLI-----DGLVDHDR------P 184
           D Y  N  I   S  G++  AR+LFD+   +D+V++ S++     +G + H +      P
Sbjct: 28  DVYFANLNITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSLFNSIP 87

Query: 185 VEAIELFGRMLEAGVE---VNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECK--- 238
           ++ I  +  ++ A ++   +NDA   S   A  +    S    + G VK  +  E K   
Sbjct: 88  IKNIVSWNSIITACIQNDNINDA--FSYFTAMPEKNVASYNAMMSGFVKMGRVEEAKKVF 145

Query: 239 -----CNVS--TALIDMYAK---SGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKE 288
                 NV   T +ID Y K      I+ A              WT MISGL  +GL +E
Sbjct: 146 EEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNEVSWTVMISGLVENGLHEE 205

Query: 289 AIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDM--KKRYGIEPTIQHFGC 346
           A ++F+ M   NV       TA+++       + EA+ +F  +  K R      I  F  
Sbjct: 206 AWEVFVRMPQKNVV----AFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGF-- 259

Query: 347 VVDLLARAGCLKEAEDFMNAM---PMKPDAVLWRTLIWAC 383
                A+ G  +EA +  + M    M+PD + + +L  AC
Sbjct: 260 -----AQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTAC 294


>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:37900570-37903619 | 20130731
          Length = 662

 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 164/310 (52%), Gaps = 3/310 (0%)

Query: 136 DCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRML 195
           D    N++I  +S  GDL   +E F+ MP ++++SW S+I G   ++    AIELF +M 
Sbjct: 264 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 323

Query: 196 EAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCI 255
             G   +  T+ S+L        L +G+++H  V   K +     ++ +LI MY++ G I
Sbjct: 324 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVT--KTVVPDLPINNSLITMYSRCGEI 381

Query: 256 ESAX-XXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSA 314
             A               W AMI G A HG   +A++LF  M+   ++P   T  +VL+A
Sbjct: 382 GDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNA 441

Query: 315 CRNADLVREAYMVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAV 374
           C +A LV E    F+ M   YGIEP ++HF  +VD+L R G L+EA D +  MP+KPD  
Sbjct: 442 CAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKA 501

Query: 375 LWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMN 434
           +W  L+ AC+VH + + A+   K  + +  + S  Y L  N+YA +G+W +   VR LM 
Sbjct: 502 VWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALME 561

Query: 435 KKGLIKPPGS 444
           +  + K  GS
Sbjct: 562 ENNVKKQAGS 571



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 46/293 (15%)

Query: 36  FAALSPSGDLNYARLLLTSNPALNSYYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTH 95
            +  S  GDL   +    + P  N   +N+++  Y  + D   +  A+ LF  M  +   
Sbjct: 272 ISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNED---YKGAIELFSQMQLKGER 328

Query: 96  GVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGV 155
               PD  T   +L     L     GKQ+H F+TK     D  I N+LI MYS  G++G 
Sbjct: 329 ----PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGD 383

Query: 156 ARELFDRMP-DRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACA 214
           AR +F+ M   +DV++W ++I G   H    +A+ELF RM    ++    T +SVL ACA
Sbjct: 384 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACA 443

Query: 215 DSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWT 274
            +G +  G++    +     IE +     +L+D+                          
Sbjct: 444 HAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI-------------------------- 477

Query: 275 AMISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACR---NADLVREA 324
                L   G  +EA+DL + M    VKPD+    A+L ACR   N DL + A
Sbjct: 478 -----LGRQGQLQEAMDLIVNMP---VKPDKAVWGALLGACRVHSNVDLAQVA 522



 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/326 (21%), Positives = 136/326 (41%), Gaps = 37/326 (11%)

Query: 112 CARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSW 171
           C   +   +G++L   + +     DC   N +I  Y+  G +  A E+F+ MP+R+VVS 
Sbjct: 39  CRGSRFVEEGRKLFDIMPQ----RDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSC 94

Query: 172 TSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKE 231
            ++++G + +     A+  F +M E     + A++  ++     +G L M  ++  +V+ 
Sbjct: 95  NAVVNGFLLNGDVDSAVGFFRKMGER----DSASLSGLVSGLVRNGKLDMAAEI--LVEY 148

Query: 232 KKRIECKCNVSTA---LIDMYAKSGCIESAX-------------XXXXXXXXXXXXXWTA 275
               + K ++  A   LI  Y + G +E A                           W +
Sbjct: 149 GNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNS 208

Query: 276 MISGLASHGLCKEAIDLFLEMETCNVKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY 335
           M+      G    A +LF  M    V+ D  +   V+        + EA  +F +M    
Sbjct: 209 MMMCYVKAGDVVSARELFDRM----VERDACSWNTVIGGYVQIGDMEEASKLFLEMPI-- 262

Query: 336 GIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERL 395
              P +  +  ++   ++ G LK  ++F   MP K + + W ++I   + +ED + A  L
Sbjct: 263 ---PDVLSWNSIISGFSQIGDLKRVKEFFENMPHK-NLISWNSVIAGYEKNEDYKGAIEL 318

Query: 396 MKQHLEMGVDDSGSYILASNVYASVG 421
             Q +++  +    + L+S +  S G
Sbjct: 319 FSQ-MQLKGERPDRHTLSSILSVSTG 343



 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 20/307 (6%)

Query: 143 LIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVN 202
           +I  Y    ++  AR+LFD MP RD+VSW  +I G     R    +E   ++ +   + +
Sbjct: 1   MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSC-RGSRFVEEGRKLFDIMPQRD 59

Query: 203 DATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXX 262
             +  +V+   A +G +    ++   + E+  + C      A+++ +  +G ++SA    
Sbjct: 60  CVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSC-----NAVVNGFLLNGDVDSAVGFF 114

Query: 263 XXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNVKPDE--RTMTAVLSACRNADL 320
                      + ++SGL  +G    A ++ +E      + D+       +++      +
Sbjct: 115 RKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGM 174

Query: 321 VREAYMVFSDMKKRYG--------IEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPD 372
           V EA  VF  +    G        ++  +  +  ++    +AG +  A +  + M ++ D
Sbjct: 175 VEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRM-VERD 233

Query: 373 AVLWRTLIWACKVHEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVREL 432
           A  W T+I       D E A +L    LEM + D  S+    + ++ +G      E  E 
Sbjct: 234 ACSWNTVIGGYVQIGDMEEASKLF---LEMPIPDVLSWNSIISGFSQIGDLKRVKEFFEN 290

Query: 433 MNKKGLI 439
           M  K LI
Sbjct: 291 MPHKNLI 297


>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
           chr4:24165948-24164077 | 20130731
          Length = 550

 Score =  190 bits (482), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 184/363 (50%), Gaps = 6/363 (1%)

Query: 91  RRPTHGVPAPDNFTFPFVLKCCARLKLARQGKQLHGFITKMGFGSDCYIMNALIHMYSVF 150
           R+   G+   D      V+   A+  L  +   L   +  MG   +    NALI  ++  
Sbjct: 187 RKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQK 246

Query: 151 GDLGVARELFDRM-PDR---DVVSWTSLIDGLVDHDRPVEAIELFGRMLEAGVEVNDATV 206
            D  +  E+F  M  DR   DVVSWTS++ G V + R  EA + F +ML  G     AT+
Sbjct: 247 CDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATI 306

Query: 207 VSVLRACADSGALSMGRKVHGIVKEKKRIECKCNVSTALIDMYAKSGCIESAXXXXXXXX 266
            ++L ACA    +  G+++HG       +E    V +AL+DMYAK G I  A        
Sbjct: 307 SALLPACATEARVRFGKEIHGYALVIG-VEDDLYVRSALVDMYAKCGFISEARTLFYKMP 365

Query: 267 XXXXXXWTAMISGLASHGLCKEAIDLFLEMETCNV-KPDERTMTAVLSACRNADLVREAY 325
                   +MI G A+HG C+EAI+LF +ME   V K D  T TA L+AC +   +    
Sbjct: 366 EKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQ 425

Query: 326 MVFSDMKKRYGIEPTIQHFGCVVDLLARAGCLKEAEDFMNAMPMKPDAVLWRTLIWACKV 385
            +F  M+++Y IEP ++H+ C+VDL  RAG L+EA   + +MP+KPD  +W  L+ AC+ 
Sbjct: 426 RLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRN 485

Query: 386 HEDTERAERLMKQHLEMGVDDSGSYILASNVYASVGKWSNKAEVRELMNKKGLIKPPGSS 445
           H   E AE   K   E+  + +G+ +L S++YA  G W     ++  + K  L K  G S
Sbjct: 486 HGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQGLS 545

Query: 446 RIE 448
            I+
Sbjct: 546 WID 548



 Score =  102 bits (254), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 181/447 (40%), Gaps = 49/447 (10%)

Query: 1   MEVTTMSEALQLHAQILKLGTSNNDAPRNFSKLFTFAALSPSGDLNYARLLLTSNPALNS 60
           +E  T S +LQ   ++  L T+N     N          +  G L+ AR L    P  N 
Sbjct: 36  IETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTNI 95

Query: 61  YYYNTMLRAYSLSSDPTHHFHALSLFIFMLRRPTHGVPAPDNFTFPFVLKCCARLKLARQ 120
           + +  ++   +  +    H HAL +F  M  +  +   +   F  P VLK C  +     
Sbjct: 96  HRWIALI---ATCARCGFHDHALEVFSEM--QTLNDQKSNSVFVIPSVLKACGHVGDRIY 150

Query: 121 GKQLHGFITKMGFGSDCYIMNALIHMYSVFGDLGVARELFDRMPDRDVVSWTSLIDGLVD 180
           G+Q+H  + K  F  D ++ +ALI MYS  G++  AR++FD M  +D+V+  +++ G   
Sbjct: 151 GEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQ 210

Query: 181 HDRPVEAIELFGRMLEAGVEVNDATVVSVLRACADSGALSMGRKVHGIVKEKKRIECKCN 240
              P EA+ L   M   GV  N  T  +++   A      M  ++  ++ E  R+E    
Sbjct: 211 QGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNE-DRVE---- 265

Query: 241 VSTALIDMYAKSGCIESAXXXXXXXXXXXXXXWTAMISGLASHGLCKEAIDLFLEMETCN 300
                                           WT+++SG   +   +EA D F +M    
Sbjct: 266 ---------------------------PDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLG 298

Query: 301 VKPDERTMTAVLSACRNADLVREAYMVFSDMKKRY----GIEPTIQHFGCVVDLLARAGC 356
             P   T++A+L AC       EA + F      Y    G+E  +     +VD+ A+ G 
Sbjct: 299 FCPTSATISALLPACAT-----EARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGF 353

Query: 357 LKEAEDFMNAMPMKPDAVLWRTLIWACKVHEDTERAERLMKQHLEMGVD--DSGSYILAS 414
           + EA      MP K + V   ++I+    H   E A  L  Q    GV   D  ++  A 
Sbjct: 354 ISEARTLFYKMPEK-NTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAAL 412

Query: 415 NVYASVGKWSNKAEVRELMNKKGLIKP 441
              + VG       + ++M +K  I+P
Sbjct: 413 TACSHVGDIELGQRLFKIMQEKYCIEP 439