Miyakogusa Predicted Gene
- Lj1g3v3381250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3381250.1 Non Characterized Hit- tr|H9VTW9|H9VTW9_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda GN=0,43.17,3e-17,no
description,Zinc finger, RING/FYVE/PHD-type; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; ZF_,CUFF.30567.1
(430 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g037750.3 | ubiquitin-protein ligase | HC | chr8:13993741-... 458 e-129
Medtr8g037750.2 | ubiquitin-protein ligase | HC | chr8:13993741-... 458 e-129
Medtr8g037750.1 | ubiquitin-protein ligase | HC | chr8:13993741-... 458 e-129
Medtr3g117180.2 | RING/U-box protein | HC | chr3:54822019-548267... 456 e-128
Medtr3g117180.1 | RING/U-box protein | HC | chr3:54822056-548266... 456 e-128
Medtr3g112230.3 | ubiquitin-protein ligase | HC | chr3:52557351-... 263 2e-70
Medtr3g112230.1 | ubiquitin-protein ligase | HC | chr3:52555883-... 262 4e-70
Medtr3g112230.4 | ubiquitin-protein ligase | HC | chr3:52556464-... 262 4e-70
Medtr3g112230.2 | ubiquitin-protein ligase | HC | chr3:52555883-... 262 4e-70
Medtr1g022505.1 | C3HC4-type RING zinc finger protein | HC | chr... 126 4e-29
Medtr1g022505.4 | C3HC4-type RING zinc finger protein | HC | chr... 125 6e-29
Medtr1g022505.2 | C3HC4-type RING zinc finger protein | HC | chr... 125 6e-29
Medtr1g022505.3 | C3HC4-type RING zinc finger protein | HC | chr... 125 6e-29
Medtr1g022505.5 | C3HC4-type RING zinc finger protein | HC | chr... 125 9e-29
Medtr4g115930.1 | RING-H2 zinc finger protein | HC | chr4:479081... 62 2e-09
Medtr4g115930.5 | RING-H2 zinc finger protein | HC | chr4:479077... 61 2e-09
Medtr4g115930.3 | RING-H2 zinc finger protein | HC | chr4:479078... 61 2e-09
Medtr4g115930.4 | RING-H2 zinc finger protein | HC | chr4:479080... 61 3e-09
Medtr4g115930.2 | RING-H2 zinc finger protein | HC | chr4:479081... 61 3e-09
Medtr5g041750.1 | RING/U-box protein, putative | HC | chr5:18336... 54 4e-07
>Medtr8g037750.3 | ubiquitin-protein ligase | HC |
chr8:13993741-13988036 | 20130731
Length = 440
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/444 (58%), Positives = 289/444 (65%), Gaps = 18/444 (4%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINWFSDGISR 60
MGAACCV+A+DKT+QSG TSEV HRN RCSPTWS RWDHR RVAGEDTSINWFSDG+S
Sbjct: 1 MGAACCVSARDKTIQSGPTSEVWHRNARCSPTWSLRWDHRS-RVAGEDTSINWFSDGVSS 59
Query: 61 NDGSENKNESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVSMDMNV 120
ND ENKNES +VSEDGSPLQ+YQRNR KSPISEGT H + S +DQSISR VS+D +
Sbjct: 60 NDRLENKNES-HVSEDGSPLQSYQRNRWQKSPISEGTAQHTK-SFSDQSISRNVSIDGRM 117
Query: 121 EQGNELTESSIVXXX----XXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPGHQ 176
EQ NEL ES+ Q + PSS TPS+WP S G Q
Sbjct: 118 EQVNELEESAAASISCPFPTKTSPTLSSTSLSISPLPSQSRLPPSSSTPSKWPSHSRGFQ 177
Query: 177 LLRQASDSRIPAYKSPSRFSLSEERPMFPTWSNESGMRSHGGSSDGWSIPGFPEMTGTPH 236
L RQ SDSRI +KSPS F SEERP+FP+ SNE GM S GGSSD S PGF E+ G PH
Sbjct: 178 LSRQVSDSRIMGFKSPSSFYASEERPVFPSRSNEYGMHSGGGSSDYCSRPGFTELMGNPH 237
Query: 237 RDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTEM-SWRS------NNL 289
+RWS DSESF FN +RLAR S S SPVDLQTCGVCS LTE SW + N+L
Sbjct: 238 MERWSVDSESFGFNCDRLARFSSRFST-SPVDLQTCGVCSNHLTEKSSWSTQKIIANNDL 296
Query: 290 SVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVKARNK 349
SVV+VLICGHVYHAECLES+T +INKYDPACPVCTFG D KARNK
Sbjct: 297 SVVSVLICGHVYHAECLESITPEINKYDPACPVCTFGEKQTRKLFEKAMKAEMDSKARNK 356
Query: 350 KSKNRXXXXXXXXXXXXXX---HXXXXXXXXXXPRADXXXXXXXXXXXPFLRRHFTFGSK 406
KS+N+ PR D PFL RHF+FGSK
Sbjct: 357 KSRNQILDNEIDDDDDDSVVFDQFKDKRRQNKGPRMDSSSSKRSSSGKPFLSRHFSFGSK 416
Query: 407 GSRSMLDNHPTRKKGFFWAKSSKQ 430
GS+SMLDNHPTRKKGFFWAKSSK+
Sbjct: 417 GSKSMLDNHPTRKKGFFWAKSSKE 440
>Medtr8g037750.2 | ubiquitin-protein ligase | HC |
chr8:13993741-13988036 | 20130731
Length = 440
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/444 (58%), Positives = 289/444 (65%), Gaps = 18/444 (4%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINWFSDGISR 60
MGAACCV+A+DKT+QSG TSEV HRN RCSPTWS RWDHR RVAGEDTSINWFSDG+S
Sbjct: 1 MGAACCVSARDKTIQSGPTSEVWHRNARCSPTWSLRWDHRS-RVAGEDTSINWFSDGVSS 59
Query: 61 NDGSENKNESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVSMDMNV 120
ND ENKNES +VSEDGSPLQ+YQRNR KSPISEGT H + S +DQSISR VS+D +
Sbjct: 60 NDRLENKNES-HVSEDGSPLQSYQRNRWQKSPISEGTAQHTK-SFSDQSISRNVSIDGRM 117
Query: 121 EQGNELTESSIVXXX----XXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPGHQ 176
EQ NEL ES+ Q + PSS TPS+WP S G Q
Sbjct: 118 EQVNELEESAAASISCPFPTKTSPTLSSTSLSISPLPSQSRLPPSSSTPSKWPSHSRGFQ 177
Query: 177 LLRQASDSRIPAYKSPSRFSLSEERPMFPTWSNESGMRSHGGSSDGWSIPGFPEMTGTPH 236
L RQ SDSRI +KSPS F SEERP+FP+ SNE GM S GGSSD S PGF E+ G PH
Sbjct: 178 LSRQVSDSRIMGFKSPSSFYASEERPVFPSRSNEYGMHSGGGSSDYCSRPGFTELMGNPH 237
Query: 237 RDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTEM-SWRS------NNL 289
+RWS DSESF FN +RLAR S S SPVDLQTCGVCS LTE SW + N+L
Sbjct: 238 MERWSVDSESFGFNCDRLARFSSRFST-SPVDLQTCGVCSNHLTEKSSWSTQKIIANNDL 296
Query: 290 SVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVKARNK 349
SVV+VLICGHVYHAECLES+T +INKYDPACPVCTFG D KARNK
Sbjct: 297 SVVSVLICGHVYHAECLESITPEINKYDPACPVCTFGEKQTRKLFEKAMKAEMDSKARNK 356
Query: 350 KSKNRXXXXXXXXXXXXXX---HXXXXXXXXXXPRADXXXXXXXXXXXPFLRRHFTFGSK 406
KS+N+ PR D PFL RHF+FGSK
Sbjct: 357 KSRNQILDNEIDDDDDDSVVFDQFKDKRRQNKGPRMDSSSSKRSSSGKPFLSRHFSFGSK 416
Query: 407 GSRSMLDNHPTRKKGFFWAKSSKQ 430
GS+SMLDNHPTRKKGFFWAKSSK+
Sbjct: 417 GSKSMLDNHPTRKKGFFWAKSSKE 440
>Medtr8g037750.1 | ubiquitin-protein ligase | HC |
chr8:13993741-13988036 | 20130731
Length = 440
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/444 (58%), Positives = 289/444 (65%), Gaps = 18/444 (4%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINWFSDGISR 60
MGAACCV+A+DKT+QSG TSEV HRN RCSPTWS RWDHR RVAGEDTSINWFSDG+S
Sbjct: 1 MGAACCVSARDKTIQSGPTSEVWHRNARCSPTWSLRWDHRS-RVAGEDTSINWFSDGVSS 59
Query: 61 NDGSENKNESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVSMDMNV 120
ND ENKNES +VSEDGSPLQ+YQRNR KSPISEGT H + S +DQSISR VS+D +
Sbjct: 60 NDRLENKNES-HVSEDGSPLQSYQRNRWQKSPISEGTAQHTK-SFSDQSISRNVSIDGRM 117
Query: 121 EQGNELTESSIVXXX----XXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPGHQ 176
EQ NEL ES+ Q + PSS TPS+WP S G Q
Sbjct: 118 EQVNELEESAAASISCPFPTKTSPTLSSTSLSISPLPSQSRLPPSSSTPSKWPSHSRGFQ 177
Query: 177 LLRQASDSRIPAYKSPSRFSLSEERPMFPTWSNESGMRSHGGSSDGWSIPGFPEMTGTPH 236
L RQ SDSRI +KSPS F SEERP+FP+ SNE GM S GGSSD S PGF E+ G PH
Sbjct: 178 LSRQVSDSRIMGFKSPSSFYASEERPVFPSRSNEYGMHSGGGSSDYCSRPGFTELMGNPH 237
Query: 237 RDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTEM-SWRS------NNL 289
+RWS DSESF FN +RLAR S S SPVDLQTCGVCS LTE SW + N+L
Sbjct: 238 MERWSVDSESFGFNCDRLARFSSRFST-SPVDLQTCGVCSNHLTEKSSWSTQKIIANNDL 296
Query: 290 SVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVKARNK 349
SVV+VLICGHVYHAECLES+T +INKYDPACPVCTFG D KARNK
Sbjct: 297 SVVSVLICGHVYHAECLESITPEINKYDPACPVCTFGEKQTRKLFEKAMKAEMDSKARNK 356
Query: 350 KSKNRXXXXXXXXXXXXXX---HXXXXXXXXXXPRADXXXXXXXXXXXPFLRRHFTFGSK 406
KS+N+ PR D PFL RHF+FGSK
Sbjct: 357 KSRNQILDNEIDDDDDDSVVFDQFKDKRRQNKGPRMDSSSSKRSSSGKPFLSRHFSFGSK 416
Query: 407 GSRSMLDNHPTRKKGFFWAKSSKQ 430
GS+SMLDNHPTRKKGFFWAKSSK+
Sbjct: 417 GSKSMLDNHPTRKKGFFWAKSSKE 440
>Medtr3g117180.2 | RING/U-box protein | HC | chr3:54822019-54826776
| 20130731
Length = 451
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/453 (56%), Positives = 286/453 (63%), Gaps = 27/453 (5%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINWFSDGISR 60
MG AC VAA+DKTVQSG T+E RN R SPTWSFRWDHRG RVAGEDTSINWFSDG SR
Sbjct: 1 MGNACFVAARDKTVQSGPTNENSLRNIRNSPTWSFRWDHRG-RVAGEDTSINWFSDGNSR 59
Query: 61 NDGSENKNESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVSMDMNV 120
N GSE KNES V E+GSP QN Q N C KSPISEGT +VR+S +D ISR+VS+D+++
Sbjct: 60 NGGSETKNESGRVLENGSPAQNCQLNTCQKSPISEGTGANVRDSTSDLFISRSVSIDVSM 119
Query: 121 EQGNELTESSIVXXXXXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPGHQLLRQ 180
+Q N L ESS+ Q HMLP S TPSR +SPGHQ L Q
Sbjct: 120 QQANGLGESSLASWPSPTKPPLRSTSLSASPLSSQSHMLPPSFTPSRCTGQSPGHQPLWQ 179
Query: 181 ASDSRIPAYKSPSRFSLSEERPMFPTWSNESGMRSHGGSSDGWSI--PGFPEMTGTPHRD 238
SD + AYK P FSLSEERP+ +WSN SGM S GGSSDGWS PGFPE+ GTP R
Sbjct: 180 TSDIQRQAYKLPGSFSLSEERPVL-SWSNGSGMHSRGGSSDGWSTVPPGFPELMGTPQRQ 238
Query: 239 RWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTEMS-------WRSNNLSV 291
RWS DSESF NRERL RS SW SA SPVDL+TC CSK+L E S + +N+LSV
Sbjct: 239 RWSLDSESFGSNRERLVRSSSWFSA-SPVDLRTCNFCSKVLKEKSPWSTQNIYSNNDLSV 297
Query: 292 VAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVKARNKKS 351
VAVLICGHVYHAECLE+MT DINKYDPACPVC+FG D+KARNK+
Sbjct: 298 VAVLICGHVYHAECLENMTSDINKYDPACPVCSFGEKQTMKLAKKVLKAEMDLKARNKRP 357
Query: 352 KNRXXXXXXXXXXXXX---------------XHXXXXXXXXXXPRADXXXXXXXXXXXPF 396
KN+ P+ D PF
Sbjct: 358 KNQVEDGDIEYYIENNDSVVIDSFKVREPKGKGKGKGKGKGKGPQMDSSSHGKISFGKPF 417
Query: 397 LRRHFTFGSKGSRSMLDNHPTRKKGFFWAKSSK 429
LRRHFTFGSKGSRSMLD+HPT+KKGFFW KSSK
Sbjct: 418 LRRHFTFGSKGSRSMLDSHPTKKKGFFWTKSSK 450
>Medtr3g117180.1 | RING/U-box protein | HC | chr3:54822056-54826656
| 20130731
Length = 451
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/453 (56%), Positives = 286/453 (63%), Gaps = 27/453 (5%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINWFSDGISR 60
MG AC VAA+DKTVQSG T+E RN R SPTWSFRWDHRG RVAGEDTSINWFSDG SR
Sbjct: 1 MGNACFVAARDKTVQSGPTNENSLRNIRNSPTWSFRWDHRG-RVAGEDTSINWFSDGNSR 59
Query: 61 NDGSENKNESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVSMDMNV 120
N GSE KNES V E+GSP QN Q N C KSPISEGT +VR+S +D ISR+VS+D+++
Sbjct: 60 NGGSETKNESGRVLENGSPAQNCQLNTCQKSPISEGTGANVRDSTSDLFISRSVSIDVSM 119
Query: 121 EQGNELTESSIVXXXXXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPGHQLLRQ 180
+Q N L ESS+ Q HMLP S TPSR +SPGHQ L Q
Sbjct: 120 QQANGLGESSLASWPSPTKPPLRSTSLSASPLSSQSHMLPPSFTPSRCTGQSPGHQPLWQ 179
Query: 181 ASDSRIPAYKSPSRFSLSEERPMFPTWSNESGMRSHGGSSDGWSI--PGFPEMTGTPHRD 238
SD + AYK P FSLSEERP+ +WSN SGM S GGSSDGWS PGFPE+ GTP R
Sbjct: 180 TSDIQRQAYKLPGSFSLSEERPVL-SWSNGSGMHSRGGSSDGWSTVPPGFPELMGTPQRQ 238
Query: 239 RWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTEMS-------WRSNNLSV 291
RWS DSESF NRERL RS SW SA SPVDL+TC CSK+L E S + +N+LSV
Sbjct: 239 RWSLDSESFGSNRERLVRSSSWFSA-SPVDLRTCNFCSKVLKEKSPWSTQNIYSNNDLSV 297
Query: 292 VAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVKARNKKS 351
VAVLICGHVYHAECLE+MT DINKYDPACPVC+FG D+KARNK+
Sbjct: 298 VAVLICGHVYHAECLENMTSDINKYDPACPVCSFGEKQTMKLAKKVLKAEMDLKARNKRP 357
Query: 352 KNRXXXXXXXXXXXXX---------------XHXXXXXXXXXXPRADXXXXXXXXXXXPF 396
KN+ P+ D PF
Sbjct: 358 KNQVEDGDIEYYIENNDSVVIDSFKVREPKGKGKGKGKGKGKGPQMDSSSHGKISFGKPF 417
Query: 397 LRRHFTFGSKGSRSMLDNHPTRKKGFFWAKSSK 429
LRRHFTFGSKGSRSMLD+HPT+KKGFFW KSSK
Sbjct: 418 LRRHFTFGSKGSRSMLDSHPTKKKGFFWTKSSK 450
>Medtr3g112230.3 | ubiquitin-protein ligase | HC |
chr3:52557351-52559879 | 20130731
Length = 438
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 235/445 (52%), Gaps = 29/445 (6%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINW-FSDGIS 59
MG+ CCVAAKD+T+ + + SE HRN CSP+ SF+WD R GRVA E +++ S +S
Sbjct: 6 MGSVCCVAAKDQTLPNRTGSESFHRNPVCSPSLSFQWD-RWGRVASEIDDLSFRASRRVS 64
Query: 60 RNDGSENK----NESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVS 115
R+ E K ++ +S+ GS L+N KSPI E + +D S+S S
Sbjct: 65 RSVSMEFKGSLSSDRGNLSDVGSTLENSVTPMSQKSPIHEQLGANRMTLSSDLSMSSNCS 124
Query: 116 -MDMNVEQGNELTESSIVXXXXXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPG 174
+ N+ + E+ ESSI H LPS TPSRW +RSPG
Sbjct: 125 TVAKNLTESPEIAESSIPNISLSMPSSFSTPTTRNLNR----HNLPSP-TPSRWAHRSPG 179
Query: 175 HQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGGSSDGWSIPGFPEMT 232
H LLRQ SDSRI KSP S+SE RP F T SN+ S GSSDGWS+ F E+
Sbjct: 180 HPLLRQISDSRILGLKSPDN-SISEGRPSFVLSTCSNDMIAGSQCGSSDGWSMRTFSELV 238
Query: 233 GTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTE-MSWRS----- 286
+ ++RWSFDSE F R +L+ + S S +DLQ+CG CSKLLTE +W S
Sbjct: 239 ASSQKERWSFDSEHFGSGRHKLSATSSRFSYSPTMDLQSCGACSKLLTERTAWSSQKFIS 298
Query: 287 -NNLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVK 345
N+LSVVAVL+CGH YHAECLE+MT + + YDPACP+C G ++K
Sbjct: 299 NNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEMK 358
Query: 346 ARNKK-SKNRXXXXXXXXXXXXXXHXXXXXXXXXXPRADXXXXXXXXXXXPFLRRHFTFG 404
A+N K S+NR + + PFL+RHF+ G
Sbjct: 359 AKNYKISRNRVVDSYFDGGLDGYDRQKSAAS-----KLEASSSSRSSLRKPFLKRHFSLG 413
Query: 405 SKGSRSMLDNHPTRKKGFFWAKSSK 429
SK +RS+ DN RKKG FWA+ K
Sbjct: 414 SKWNRSLSDNDSARKKG-FWARYRK 437
>Medtr3g112230.1 | ubiquitin-protein ligase | HC |
chr3:52555883-52559879 | 20130731
Length = 433
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 235/445 (52%), Gaps = 29/445 (6%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINW-FSDGIS 59
MG+ CCVAAKD+T+ + + SE HRN CSP+ SF+WD R GRVA E +++ S +S
Sbjct: 1 MGSVCCVAAKDQTLPNRTGSESFHRNPVCSPSLSFQWD-RWGRVASEIDDLSFRASRRVS 59
Query: 60 RNDGSENK----NESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVS 115
R+ E K ++ +S+ GS L+N KSPI E + +D S+S S
Sbjct: 60 RSVSMEFKGSLSSDRGNLSDVGSTLENSVTPMSQKSPIHEQLGANRMTLSSDLSMSSNCS 119
Query: 116 -MDMNVEQGNELTESSIVXXXXXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPG 174
+ N+ + E+ ESSI H LPS TPSRW +RSPG
Sbjct: 120 TVAKNLTESPEIAESSIPNISLSMPSSFSTPTTRNLNR----HNLPSP-TPSRWAHRSPG 174
Query: 175 HQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGGSSDGWSIPGFPEMT 232
H LLRQ SDSRI KSP S+SE RP F T SN+ S GSSDGWS+ F E+
Sbjct: 175 HPLLRQISDSRILGLKSPDN-SISEGRPSFVLSTCSNDMIAGSQCGSSDGWSMRTFSELV 233
Query: 233 GTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTE-MSWRS----- 286
+ ++RWSFDSE F R +L+ + S S +DLQ+CG CSKLLTE +W S
Sbjct: 234 ASSQKERWSFDSEHFGSGRHKLSATSSRFSYSPTMDLQSCGACSKLLTERTAWSSQKFIS 293
Query: 287 -NNLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVK 345
N+LSVVAVL+CGH YHAECLE+MT + + YDPACP+C G ++K
Sbjct: 294 NNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEMK 353
Query: 346 ARNKK-SKNRXXXXXXXXXXXXXXHXXXXXXXXXXPRADXXXXXXXXXXXPFLRRHFTFG 404
A+N K S+NR + + PFL+RHF+ G
Sbjct: 354 AKNYKISRNRVVDSYFDGGLDGYDRQKSAAS-----KLEASSSSRSSLRKPFLKRHFSLG 408
Query: 405 SKGSRSMLDNHPTRKKGFFWAKSSK 429
SK +RS+ DN RKKG FWA+ K
Sbjct: 409 SKWNRSLSDNDSARKKG-FWARYRK 432
>Medtr3g112230.4 | ubiquitin-protein ligase | HC |
chr3:52556464-52559879 | 20130731
Length = 433
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 235/445 (52%), Gaps = 29/445 (6%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINW-FSDGIS 59
MG+ CCVAAKD+T+ + + SE HRN CSP+ SF+WD R GRVA E +++ S +S
Sbjct: 1 MGSVCCVAAKDQTLPNRTGSESFHRNPVCSPSLSFQWD-RWGRVASEIDDLSFRASRRVS 59
Query: 60 RNDGSENK----NESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVS 115
R+ E K ++ +S+ GS L+N KSPI E + +D S+S S
Sbjct: 60 RSVSMEFKGSLSSDRGNLSDVGSTLENSVTPMSQKSPIHEQLGANRMTLSSDLSMSSNCS 119
Query: 116 -MDMNVEQGNELTESSIVXXXXXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPG 174
+ N+ + E+ ESSI H LPS TPSRW +RSPG
Sbjct: 120 TVAKNLTESPEIAESSIPNISLSMPSSFSTPTTRNLNR----HNLPSP-TPSRWAHRSPG 174
Query: 175 HQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGGSSDGWSIPGFPEMT 232
H LLRQ SDSRI KSP S+SE RP F T SN+ S GSSDGWS+ F E+
Sbjct: 175 HPLLRQISDSRILGLKSPDN-SISEGRPSFVLSTCSNDMIAGSQCGSSDGWSMRTFSELV 233
Query: 233 GTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTE-MSWRS----- 286
+ ++RWSFDSE F R +L+ + S S +DLQ+CG CSKLLTE +W S
Sbjct: 234 ASSQKERWSFDSEHFGSGRHKLSATSSRFSYSPTMDLQSCGACSKLLTERTAWSSQKFIS 293
Query: 287 -NNLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVK 345
N+LSVVAVL+CGH YHAECLE+MT + + YDPACP+C G ++K
Sbjct: 294 NNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEMK 353
Query: 346 ARNKK-SKNRXXXXXXXXXXXXXXHXXXXXXXXXXPRADXXXXXXXXXXXPFLRRHFTFG 404
A+N K S+NR + + PFL+RHF+ G
Sbjct: 354 AKNYKISRNRVVDSYFDGGLDGYDRQKSAAS-----KLEASSSSRSSLRKPFLKRHFSLG 408
Query: 405 SKGSRSMLDNHPTRKKGFFWAKSSK 429
SK +RS+ DN RKKG FWA+ K
Sbjct: 409 SKWNRSLSDNDSARKKG-FWARYRK 432
>Medtr3g112230.2 | ubiquitin-protein ligase | HC |
chr3:52555883-52559879 | 20130731
Length = 433
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 235/445 (52%), Gaps = 29/445 (6%)
Query: 1 MGAACCVAAKDKTVQSGSTSEVLHRNTRCSPTWSFRWDHRGGRVAGEDTSINW-FSDGIS 59
MG+ CCVAAKD+T+ + + SE HRN CSP+ SF+WD R GRVA E +++ S +S
Sbjct: 1 MGSVCCVAAKDQTLPNRTGSESFHRNPVCSPSLSFQWD-RWGRVASEIDDLSFRASRRVS 59
Query: 60 RNDGSENK----NESAYVSEDGSPLQNYQRNRCLKSPISEGTNVHVRNSPTDQSISRTVS 115
R+ E K ++ +S+ GS L+N KSPI E + +D S+S S
Sbjct: 60 RSVSMEFKGSLSSDRGNLSDVGSTLENSVTPMSQKSPIHEQLGANRMTLSSDLSMSSNCS 119
Query: 116 -MDMNVEQGNELTESSIVXXXXXXXXXXXXXXXXXXXXXXQCHMLPSSLTPSRWPYRSPG 174
+ N+ + E+ ESSI H LPS TPSRW +RSPG
Sbjct: 120 TVAKNLTESPEIAESSIPNISLSMPSSFSTPTTRNLNR----HNLPSP-TPSRWAHRSPG 174
Query: 175 HQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGGSSDGWSIPGFPEMT 232
H LLRQ SDSRI KSP S+SE RP F T SN+ S GSSDGWS+ F E+
Sbjct: 175 HPLLRQISDSRILGLKSPDN-SISEGRPSFVLSTCSNDMIAGSQCGSSDGWSMRTFSELV 233
Query: 233 GTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTE-MSWRS----- 286
+ ++RWSFDSE F R +L+ + S S +DLQ+CG CSKLLTE +W S
Sbjct: 234 ASSQKERWSFDSEHFGSGRHKLSATSSRFSYSPTMDLQSCGACSKLLTERTAWSSQKFIS 293
Query: 287 -NNLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXXXXXXXXXXDVK 345
N+LSVVAVL+CGH YHAECLE+MT + + YDPACP+C G ++K
Sbjct: 294 NNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEMK 353
Query: 346 ARNKK-SKNRXXXXXXXXXXXXXXHXXXXXXXXXXPRADXXXXXXXXXXXPFLRRHFTFG 404
A+N K S+NR + + PFL+RHF+ G
Sbjct: 354 AKNYKISRNRVVDSYFDGGLDGYDRQKSAAS-----KLEASSSSRSSLRKPFLKRHFSLG 408
Query: 405 SKGSRSMLDNHPTRKKGFFWAKSSK 429
SK +RS+ DN RKKG FWA+ K
Sbjct: 409 SKWNRSLSDNDSARKKG-FWARYRK 432
>Medtr1g022505.1 | C3HC4-type RING zinc finger protein | HC |
chr1:7243871-7247480 | 20130731
Length = 391
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 161 SSLTPSRWPYRSPGHQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGG 218
S+ TP+RW +RS G Q SD+++ Y S E R F T+SNE S G
Sbjct: 123 SNSTPTRWAHRSLG-----QLSDNQMITYLKSPDSSTFEGRASFVLSTYSNEVEAGSQCG 177
Query: 219 SSDGWSIPGFPEMTGTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKL 278
SSD WS+ F E+ + R RWSFDSE F R +++ S S LS S +DLQ+CG+C +
Sbjct: 178 SSDRWSVHTFSELVSSSQRGRWSFDSECFGSGRRKISASSSRLSNSSSMDLQSCGICMRP 237
Query: 279 LTEMSWRSN-------NLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXX 331
L + S N +LS VA+L C HV+HAECLE MT D +KYDP CP+C
Sbjct: 238 LCDKSAGINQKFIANIDLSSVAILACKHVFHAECLEPMTDDADKYDPPCPICMVDDKHSS 297
Query: 332 XXXXXXXXXXXDVKARNKK 350
+ KA+N K
Sbjct: 298 KGSKKGFWAEAETKAKNLK 316
>Medtr1g022505.4 | C3HC4-type RING zinc finger protein | HC |
chr1:7243845-7247867 | 20130731
Length = 378
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 161 SSLTPSRWPYRSPGHQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGG 218
S+ TP+RW +RS G Q SD+++ Y S E R F T+SNE S G
Sbjct: 110 SNSTPTRWAHRSLG-----QLSDNQMITYLKSPDSSTFEGRASFVLSTYSNEVEAGSQCG 164
Query: 219 SSDGWSIPGFPEMTGTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKL 278
SSD WS+ F E+ + R RWSFDSE F R +++ S S LS S +DLQ+CG+C +
Sbjct: 165 SSDRWSVHTFSELVSSSQRGRWSFDSECFGSGRRKISASSSRLSNSSSMDLQSCGICMRP 224
Query: 279 LTEMSWRSN-------NLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXX 331
L + S N +LS VA+L C HV+HAECLE MT D +KYDP CP+C
Sbjct: 225 LCDKSAGINQKFIANIDLSSVAILACKHVFHAECLEPMTDDADKYDPPCPICMVDDKHSS 284
Query: 332 XXXXXXXXXXXDVKARNKK 350
+ KA+N K
Sbjct: 285 KGSKKGFWAEAETKAKNLK 303
>Medtr1g022505.2 | C3HC4-type RING zinc finger protein | HC |
chr1:7243845-7247867 | 20130731
Length = 378
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 161 SSLTPSRWPYRSPGHQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGG 218
S+ TP+RW +RS G Q SD+++ Y S E R F T+SNE S G
Sbjct: 110 SNSTPTRWAHRSLG-----QLSDNQMITYLKSPDSSTFEGRASFVLSTYSNEVEAGSQCG 164
Query: 219 SSDGWSIPGFPEMTGTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKL 278
SSD WS+ F E+ + R RWSFDSE F R +++ S S LS S +DLQ+CG+C +
Sbjct: 165 SSDRWSVHTFSELVSSSQRGRWSFDSECFGSGRRKISASSSRLSNSSSMDLQSCGICMRP 224
Query: 279 LTEMSWRSN-------NLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXX 331
L + S N +LS VA+L C HV+HAECLE MT D +KYDP CP+C
Sbjct: 225 LCDKSAGINQKFIANIDLSSVAILACKHVFHAECLEPMTDDADKYDPPCPICMVDDKHSS 284
Query: 332 XXXXXXXXXXXDVKARNKK 350
+ KA+N K
Sbjct: 285 KGSKKGFWAEAETKAKNLK 303
>Medtr1g022505.3 | C3HC4-type RING zinc finger protein | HC |
chr1:7243845-7247867 | 20130731
Length = 378
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 161 SSLTPSRWPYRSPGHQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGG 218
S+ TP+RW +RS G Q SD+++ Y S E R F T+SNE S G
Sbjct: 110 SNSTPTRWAHRSLG-----QLSDNQMITYLKSPDSSTFEGRASFVLSTYSNEVEAGSQCG 164
Query: 219 SSDGWSIPGFPEMTGTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKL 278
SSD WS+ F E+ + R RWSFDSE F R +++ S S LS S +DLQ+CG+C +
Sbjct: 165 SSDRWSVHTFSELVSSSQRGRWSFDSECFGSGRRKISASSSRLSNSSSMDLQSCGICMRP 224
Query: 279 LTEMSWRSN-------NLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXX 331
L + S N +LS VA+L C HV+HAECLE MT D +KYDP CP+C
Sbjct: 225 LCDKSAGINQKFIANIDLSSVAILACKHVFHAECLEPMTDDADKYDPPCPICMVDDKHSS 284
Query: 332 XXXXXXXXXXXDVKARNKK 350
+ KA+N K
Sbjct: 285 KGSKKGFWAEAETKAKNLK 303
>Medtr1g022505.5 | C3HC4-type RING zinc finger protein | HC |
chr1:7246080-7247867 | 20130731
Length = 349
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 104/196 (53%), Gaps = 14/196 (7%)
Query: 164 TPSRWPYRSPGHQLLRQASDSRIPAYKSPSRFSLSEERPMF--PTWSNESGMRSHGGSSD 221
TP+RW +RS G Q SD+++ Y S E R F T+SNE S GSSD
Sbjct: 84 TPTRWAHRSLG-----QLSDNQMITYLKSPDSSTFEGRASFVLSTYSNEVEAGSQCGSSD 138
Query: 222 GWSIPGFPEMTGTPHRDRWSFDSESFSFNRERLARSRSWLSAFSPVDLQTCGVCSKLLTE 281
WS+ F E+ + R RWSFDSE F R +++ S S LS S +DLQ+CG+C + L +
Sbjct: 139 RWSVHTFSELVSSSQRGRWSFDSECFGSGRRKISASSSRLSNSSSMDLQSCGICMRPLCD 198
Query: 282 MSWRSN-------NLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCTFGXXXXXXXX 334
S N +LS VA+L C HV+HAECLE MT D +KYDP CP+C
Sbjct: 199 KSAGINQKFIANIDLSSVAILACKHVFHAECLEPMTDDADKYDPPCPICMVDDKHSSKGS 258
Query: 335 XXXXXXXXDVKARNKK 350
+ KA+N K
Sbjct: 259 KKGFWAEAETKAKNLK 274
>Medtr4g115930.1 | RING-H2 zinc finger protein | HC |
chr4:47908179-47905195 | 20130731
Length = 246
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 239 RWSFDSESFSFNR-ERLARSRSWLSAFSP-VDLQTCGVCSKLLTEM------SWRSNNLS 290
R + +F+R ER+ S + + SP V C +C K L S N L+
Sbjct: 140 RQHLEYREKAFSRPERIRSSTFTMDSVSPDVVKMVCMICEKPLRRKINFMGNSLSCNELA 199
Query: 291 VVAVLICGHVYHAECLESMTHDINKYDPACPVCT 324
VVAVL+CGHVYHA+CLE T DP+CP+C
Sbjct: 200 VVAVLVCGHVYHADCLEQRTSVEELRDPSCPMCA 233
>Medtr4g115930.5 | RING-H2 zinc finger protein | HC |
chr4:47907775-47905211 | 20130731
Length = 211
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 239 RWSFDSESFSFNR-ERLARSRSWLSAFSP-VDLQTCGVCSKLLTEM------SWRSNNLS 290
R + +F+R ER+ S + + SP V C +C K L S N L+
Sbjct: 105 RQHLEYREKAFSRPERIRSSTFTMDSVSPDVVKMVCMICEKPLRRKINFMGNSLSCNELA 164
Query: 291 VVAVLICGHVYHAECLESMTHDINKYDPACPVCT 324
VVAVL+CGHVYHA+CLE T DP+CP+C
Sbjct: 165 VVAVLVCGHVYHADCLEQRTSVEELRDPSCPMCA 198
>Medtr4g115930.3 | RING-H2 zinc finger protein | HC |
chr4:47907829-47905211 | 20130731
Length = 210
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 239 RWSFDSESFSFNR-ERLARSRSWLSAFSP-VDLQTCGVCSKLLTEM------SWRSNNLS 290
R + +F+R ER+ S + + SP V C +C K L S N L+
Sbjct: 104 RQHLEYREKAFSRPERIRSSTFTMDSVSPDVVKMVCMICEKPLRRKINFMGNSLSCNELA 163
Query: 291 VVAVLICGHVYHAECLESMTHDINKYDPACPVCT 324
VVAVL+CGHVYHA+CLE T DP+CP+C
Sbjct: 164 VVAVLVCGHVYHADCLEQRTSVEELRDPSCPMCA 197
>Medtr4g115930.4 | RING-H2 zinc finger protein | HC |
chr4:47908040-47905211 | 20130731
Length = 216
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 237 RDRWSFDSESFSFNRERLARSRSWLSAFSP-VDLQTCGVCSKLLTEM------SWRSNNL 289
R + ++FS ER+ S + + SP V C +C K L S N L
Sbjct: 110 RQHLEYREKAFS-RPERIRSSTFTMDSVSPDVVKMVCMICEKPLRRKINFMGNSLSCNEL 168
Query: 290 SVVAVLICGHVYHAECLESMTHDINKYDPACPVCT 324
+VVAVL+CGHVYHA+CLE T DP+CP+C
Sbjct: 169 AVVAVLVCGHVYHADCLEQRTSVEELRDPSCPMCA 203
>Medtr4g115930.2 | RING-H2 zinc finger protein | HC |
chr4:47908179-47905211 | 20130731
Length = 216
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 237 RDRWSFDSESFSFNRERLARSRSWLSAFSP-VDLQTCGVCSKLLTEM------SWRSNNL 289
R + ++FS ER+ S + + SP V C +C K L S N L
Sbjct: 110 RQHLEYREKAFS-RPERIRSSTFTMDSVSPDVVKMVCMICEKPLRRKINFMGNSLSCNEL 168
Query: 290 SVVAVLICGHVYHAECLESMTHDINKYDPACPVCT 324
+VVAVL+CGHVYHA+CLE T DP+CP+C
Sbjct: 169 AVVAVLVCGHVYHADCLEQRTSVEELRDPSCPMCA 203
>Medtr5g041750.1 | RING/U-box protein, putative | HC |
chr5:18336039-18330022 | 20130731
Length = 447
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 272 CGVCSKLLTEMS-W------RSNNLSVVAVLICGHVYHAECLESMTHDINKYDPACPVCT 324
C +C K +++ S W RS ++ VL C HV+HAECL+ T K +P CPVC
Sbjct: 299 CSLCEKFMSQRSPWSSRRIVRSGDMPAAGVLPCRHVFHAECLDQATPKTRKIEPPCPVCV 358